1.2.1 (2020/03/28)

Fix for large manifests with norm id byte-wrapping issue (e.g. Omni5)
Fixes for aux VCF MNV handling
Updates GenCallScore to phred-scaled int
Updates to download_reference.sh for new genome build location and to work on OSX

1.2.0 (2019/05/24)

Fixes for python3 compatibility
Use chromosome ordering from reference
Use semi-colon as delimiter within identifier field
Fix for download_reference.sh to support more UNIX-y platforms
Various small typos
Support for outputting BAF and LRR

1.1.1 (2018/03/27)

Output warning if any mismatch to reference genome in indel source sequence
Count length of indel when scoring deletion reference allele

1.1.0 (2018/03/20)

Enable caching of genomic reference data
Enable processing of multiple GTC files or directories for improved performance
Address issue with incorrect assignment of reference allele for indels
Added script to build reference FASTA files for human

1.0.1 (2017/10/27)

Eliminated extraneous header in column

1.0.0 (2017/10/15)

Initial release