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[L7J7] Pipeline reproduction (SPM - deriv) #166

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bclenet opened this issue Feb 13, 2024 · 2 comments
Closed
9 tasks

[L7J7] Pipeline reproduction (SPM - deriv) #166

bclenet opened this issue Feb 13, 2024 · 2 comments

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@bclenet
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bclenet commented Feb 13, 2024

Softwares

SPM12

Input data

derivatives (fMRIprep)

Additional context

List of tasks

Please tick the boxes below once the corresponding task is finished. 👍

  • 👌 A maintainer of the project approved the issue, by assigning a 🏁status: ready for dev label to it.
  • 🌳 Create a branch on your fork to start the reproduction.
  • 🌅 Create a file team_{team_id}.py inside the narps_open/pipelines/ directory. You can use a file inside narps_open/pipelines/templates as a template if needed.
  • 📥 Create a pull request as soon as you completed the previous task.
  • 🧠 Write the code for the pipeline, using Nipype and the file architecture described in docs/pipelines.md.
  • 📘 Make sure your code is documented enough.
  • 🐍 Make sure your code is explicit and conforms with PEP8.
  • 🔬 Create tests for your pipeline. You can use files in tests/pipelines/test_team_* as examples.
  • 🔬 Make sure your code passes all the tests you created (see docs/testing.md).
@cmaumet cmaumet changed the title L7J7 (SPM deriv) [L7J7] Pipeline reproduction (SPM - deriv) Feb 13, 2024
@cmaumet
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cmaumet commented Feb 13, 2024

@icorouge: I am adding you as assignee on this issue (just for the time of the hackathon) so that we can more easily see which pipelines are open for new contributions in https://github.com/orgs/Inria-Empenn/projects/1/views/1

@bclenet bclenet self-assigned this Apr 9, 2024
@bclenet
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bclenet commented Apr 11, 2024

Correlation results with 108 subjects : [0.93, 0.94, 0.93, 0.94, 0.94, 0.93, 0.94, 0.93, 0.95] with commit ba2b3dd

@bclenet bclenet mentioned this issue Apr 11, 2024
8 tasks
@bclenet bclenet closed this as completed Apr 12, 2024
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