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Adapt it on freesurfer v7.4.1 #16

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BrainTseng opened this issue Mar 14, 2024 · 0 comments
Open

Adapt it on freesurfer v7.4.1 #16

BrainTseng opened this issue Mar 14, 2024 · 0 comments

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@BrainTseng
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Hi,

I ran the KUL_VBG on the HPC cluster and found it was based on v6.0.0, which contained an already moved flag -make all in Freesurfer v7. I have switched to Freesurfer v7.4.1 by replacing the flag with a new flag "-autorecon2 autorecon3" to let it run from the point to the end. It could indeed run after this without an error message and give me a satisfying outcome. Have you ever tried this on Freesurfer v7? I don't know how reliable the results could be.

Thanks,

Yuheng

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