../../include/measurements.h:335:10: fatal error: 'malloc.h' file not found

[chenchienhao]

Hi, I tried to type "make all" in ASCYLIB folder principal, and I got this error:

/Applications/Xcode.app/Contents/Developer/usr/bin/make "STM=LOCKFREE" src/linkedlist-harris src/linkedlist-harris_opt src/linkedlist-michael src/hashtable-harris src/skiplist-fraser src/skiplist-herlihy_lf src/bst-ellen src/bst-howley src/bst-aravind src/priorityqueue-alistarh src/priorityqueue-lotanshavit_lf src/priorityqueue-alistarh-herlihyBased src/queue-ms_lf src/stack-treiber
/Applications/Xcode.app/Contents/Developer/usr/bin/make -C src/linkedlist-harris 
cat: /sys/devices/system/cpu/cpu0/cpufreq/cpuinfo_max_freq: No such file or directory
(standard_in) 1: parse error
make[2]: nproc: Command not found
********************************** Using as a default number of cores:  on 1 socket
********************************** Using as a default frequency      :  GHz
********************************** If incorrect, create a manual entry in common/Makefile.common
make[2]: nproc: Command not found
cc -O3 -D_GNU_SOURCE -DLOCKFREE -DDEFAULT -DCORE_NUM= -DFREQ_GHZ= -m64 -Wall -fno-strict-aliasing -I../../src/atomic_ops -I../../include -I../../external/include -DGC=2 -DINITIALIZE_FROM_ONE=1 -c -o ../../build/measurements.o ../../src/measurements.c
In file included from ../../src/measurements.c:29:
../../include/measurements.h:335:10: fatal error: 'malloc.h' file not found
#include <malloc.h>
         ^
1 error generated.
make[2]: *** [measurements.o] Error 1
make[1]: *** [src/linkedlist-harris] Error 2
make: *** [lockfree] Error 2

After I copied my usr/include/malloc/malloc.h file and put on ASCYLIB/include folder, now terminal showing:

/Applications/Xcode.app/Contents/Developer/usr/bin/make "STM=LOCKFREE" src/linkedlist-harris src/linkedlist-harris_opt src/linkedlist-michael src/hashtable-harris src/skiplist-fraser src/skiplist-herlihy_lf src/bst-ellen src/bst-howley src/bst-aravind src/priorityqueue-alistarh src/priorityqueue-lotanshavit_lf src/priorityqueue-alistarh-herlihyBased src/queue-ms_lf src/stack-treiber
/Applications/Xcode.app/Contents/Developer/usr/bin/make -C src/linkedlist-harris 
cat: /sys/devices/system/cpu/cpu0/cpufreq/cpuinfo_max_freq: No such file or directory
(standard_in) 1: parse error
make[2]: nproc: Command not found
********************************** Using as a default number of cores:  on 1 socket
********************************** Using as a default frequency      :  GHz
********************************** If incorrect, create a manual entry in common/Makefile.common
make[2]: nproc: Command not found
cc -O3 -D_GNU_SOURCE -DLOCKFREE -DDEFAULT -DCORE_NUM= -DFREQ_GHZ= -m64 -Wall -fno-strict-aliasing -I../../src/atomic_ops -I../../include -I../../external/include -DGC=2 -DINITIALIZE_FROM_ONE=1 -c -o ../../build/measurements.o ../../src/measurements.c
make[2]: nproc: Command not found
cc -O3 -D_GNU_SOURCE -DLOCKFREE -DDEFAULT -DCORE_NUM= -DFREQ_GHZ= -m64 -Wall -fno-strict-aliasing -I../../src/atomic_ops -I../../include -I../../external/include -DGC=2 -DINITIALIZE_FROM_ONE=1 -c -o ../../build/ssalloc.o ../../src/ssalloc.c
../../src/ssalloc.c:117:17: warning: implicit declaration of function 'memalign'
      is invalid in C99 [-Wimplicit-function-declaration]
  ret = (void*) memalign(alignement, size);
                ^
../../src/ssalloc.c:117:9: warning: cast to 'void *' from smaller integer type
      'int' [-Wint-to-void-pointer-cast]
  ret = (void*) memalign(alignement, size);
        ^
2 warnings generated.
make[2]: nproc: Command not found
cc -O3 -D_GNU_SOURCE -DLOCKFREE -DDEFAULT -DCORE_NUM= -DFREQ_GHZ= -m64 -Wall -fno-strict-aliasing -I../../src/atomic_ops -I../../include -I../../external/include -DGC=2 -DINITIALIZE_FROM_ONE=1 -c -o ../../build/linkedlist.o linkedlist.c
In file included from linkedlist.c:24:
In file included from ./linkedlist.h:36:
../../include/atomic_ops_if.h:169:37: error: invalid use of a cast in a inline
      asm context requiring an l-value: remove the cast or build with
      -fheinous-gnu-extensions
        :"=r" ((unsigned long long) x)
               ~~~~~~~~~~~~~~~~~~~~~^
../../include/atomic_ops_if.h:180:27: error: invalid use of a cast in a inline
      asm context requiring an l-value: remove the cast or build with
      -fheinous-gnu-extensions
        :"=r" ((uint64_t) x)
               ~~~~~~~~~~~^
../../include/atomic_ops_if.h:190:27: error: invalid use of a cast in a inline
      asm context requiring an l-value: remove the cast or build with
      -fheinous-gnu-extensions
        :"=r" ((uint32_t) x)
               ~~~~~~~~~~~^
../../include/atomic_ops_if.h:200:27: error: invalid use of a cast in a inline
      asm context requiring an l-value: remove the cast or build with
      -fheinous-gnu-extensions
        :"=r" ((uint16_t) x)
               ~~~~~~~~~~~^
../../include/atomic_ops_if.h:210:26: error: invalid use of a cast in a inline
      asm context requiring an l-value: remove the cast or build with
      -fheinous-gnu-extensions
        :"=r" ((uint8_t) x)
               ~~~~~~~~~~^
In file included from linkedlist.c:24:
In file included from ./linkedlist.h:39:
In file included from ../../include/utils.h:43:
../../include/random.h:56:28: warning: implicit declaration of function
      'memalign' is invalid in C99 [-Wimplicit-function-declaration]
  seeds = (unsigned long*) memalign(64, 64);
                           ^
../../include/random.h:56:11: warning: cast to 'unsigned long *' from smaller
      integer type 'int' [-Wint-to-pointer-cast]
  seeds = (unsigned long*) memalign(64, 64);
          ^
In file included from linkedlist.c:24:
In file included from ./linkedlist.h:39:
../../include/utils.h:664:38: error: expected expression
    return thread_id/CORES_PER_SOCKET;
                                     ^
../../include/utils.h:696:2: error: use of undeclared identifier 'cpu_set_t'
        cpu_set_t mask;
        ^
../../include/utils.h:697:2: warning: implicit declaration of function
      'CPU_ZERO' is invalid in C99 [-Wimplicit-function-declaration]
        CPU_ZERO(&mask);
        ^
../../include/utils.h:697:12: error: use of undeclared identifier 'mask'; did
      you mean 'umask'?
        CPU_ZERO(&mask);
                  ^~~~
                  umask
/usr/include/sys/stat.h:359:8: note: 'umask' declared here
mode_t  umask(mode_t);
        ^
In file included from linkedlist.c:24:
In file included from ./linkedlist.h:39:
../../include/utils.h:698:2: warning: implicit declaration of function 'CPU_SET'
      is invalid in C99 [-Wimplicit-function-declaration]
        CPU_SET(cpu_use, &mask);
        ^
../../include/utils.h:698:20: error: use of undeclared identifier 'mask'; did
      you mean 'umask'?
        CPU_SET(cpu_use, &mask);
                          ^~~~
                          umask
/usr/include/sys/stat.h:359:8: note: 'umask' declared here
mode_t  umask(mode_t);
        ^
In file included from linkedlist.c:24:
In file included from ./linkedlist.h:39:
../../include/utils.h:703:6: warning: implicit declaration of function
      'pthread_setaffinity_np' is invalid in C99
      [-Wimplicit-function-declaration]
        if (pthread_setaffinity_np(thread, sizeof(cpu_set_t), &mask) != 0) 
            ^
../../include/utils.h:703:44: error: use of undeclared identifier 'cpu_set_t'
        if (pthread_setaffinity_np(thread, sizeof(cpu_set_t), &mask) != 0) 
                                                  ^
5 warnings and 10 errors generated.
make[2]: *** [linkedlist.o] Error 1
make[1]: *** [src/linkedlist-harris] Error 2
make: *** [lockfree] Error 2

Thanks.
Sincerely.

[trigonak]

Hi,

Are you trying to compile ASCYLIB on OS X?
We have not tested ASCYLIB on OS X.

What compiler do you use?

To start fixing the problems, you can first set the number of cores and the frequency of your processor in common/Makefile.common file, lines 192-193.

[chenchienhao]

Hi, thanks for responding.

Yes, I use OS X and there is my information of compiler:

$ gcc --version

Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr
--with-gxx-include-dir=/usr/include/c++/4.2.1
Apple LLVM version 6.0 (clang-600.0.57) (based on LLVM 3.5svn)
Target: x86_64-apple-darwin14.1.0
Thread model: posix

I will try to set the number of cores and the frequency of processor.

Sincerely.

Chen, Chien-Hao.

2016-05-17 11:12 GMT-04:00 Vasileios Trigonakis [email protected]:

Hi,

Are you trying to compile ASCYLIB on OS X?
We have not tested ASCYLIB on OS X.

What compiler do you use?

However, to start fixing the problems, you can first set the number of
cores and the frequency of your processor in common/Makefile.common file,
lines 192-193.

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#14 (comment)

[barracuda156]

Adding cflag -fheinous-gnu-extensions should solve the problem.