diff --git a/utilities/deps/small-files/blacklist.txt b/utilities/deps/small-files/blacklist.txt index 07a0bce..9819c99 100644 --- a/utilities/deps/small-files/blacklist.txt +++ b/utilities/deps/small-files/blacklist.txt @@ -26,3 +26,28 @@ ENST00000380013.9:c.4317dup ENST00000380013.9:c.5838_5839insA ENST00000380013.9:c.5843_5844dup ENST00000380013.9:c.5844dup +ENST00000335508.11:c.642dup +ENST00000429544.7:c.985dup +ENST00000335508.11:c.2445dup +ENST00000264033.6:c.815dup +ENST00000429544.7:c.844dup +ENST00000429544.7:c.939dup +ENST00000305921.8:c.1535dup +ENST00000381652.4:c.1370dup +ENST00000305921.8:c.1008dup +ENST00000371145.8:c.363dup +ENST00000371145.8:c.135dup +ENST00000291552.9:c.246dup +ENST00000378444.9:c.472dup +ENST00000371145.8:c.101dup +ENST00000371145.8:c.1400dup +ENST00000649279.2:c.640dup +ENST00000429544.7:c.1627dup +ENST00000305921.8:c.1534_1535dup +ENST00000649279.2:c.1261dup +ENST00000649279.2:c.440dup +ENST00000380013.9:c.679G>A +ENST00000371145.8:c.3222dup +ENST00000649279.2:c.434G>A +ENST00000320356.7:c.2187dup +ENST00000378444.9:c.3621dup diff --git a/utilities/deps/small-files/hotspots_genome.bed b/utilities/deps/small-files/hotspots_genome.bed index 253a94a..b679046 100644 --- a/utilities/deps/small-files/hotspots_genome.bed +++ b/utilities/deps/small-files/hotspots_genome.bed @@ -1,18 +1,27 @@ -chr1 114716121 114716127 NRAS -chr1 114713906 114713909 NRAS -chr2 208248386 208248389 IDH1 -chr2 25234371 25234374 DNMT3A -chr4 54723597 54723609 KIT -chr4 54733153 54733156 KIT -chr5 171410541 171410544 NPM1 -chr13 28018499 28018505 FLT3 -chr20 32434431 32437338 ASXL1 -chr21 34859474 34886965 RUNX1 -chr4 105237251 105272824 TET2 -chr4 105276036 105276519 TET2 -chr11 32391972 32392062 WT1 -chr11 32396257 32396407 WT1 -chr15 90088604 90088607 IDH2 -chr15 90088700 90088703 IDH2 -chr19 33301337 33301601 CEBPA -chr17 7674218 7674221 TP53 +chr20 32434431 32437338 +chr19 33301337 33301601 +chr2 25234371 25234374 +chr7 148829734 148832717 +chr7 148819595 148827240 +chr7 148813958 148815545 +chr7 148807648 148811720 +chr13 28018499 28018505 +chr2 208248386 208248389 +chr15 90088700 90088703 +chr15 90088604 90088607 +chr4 54723597 54723609 +chr4 54733153 54733156 +chr5 171410541 171410544 +chr1 114716121 114716127 +chr1 114713906 114713909 +chr21 34859474 34886965 +chr2 197401741 197403035 +chr17 76736875 76736878 +chrX 124045346 124045349 +chr4 105237251 105272824 +chr4 105276036 105276519 +chr17 7674218 7674221 +chr21 43104344 43104347 +chr21 43094665 43094668 +chr11 32396257 32396407 +chr11 32391972 32392062 \ No newline at end of file