DESCRIPTION

Package: GenomicState
Title: Build and access GenomicState objects for use with derfinder tools from
    sources like Gencode
Version: 0.99.16
Date: 2024-12-12
Authors@R: 
    person("Leonardo", "Collado-Torres", role = c("aut", "cre"), 
    email = "lcolladotor@gmail.com", comment = c(ORCID = "0000-0003-2140-308X"))
Description: This package contains functions for building GenomicState objects
    from different annotation sources such as Gencode. It also provides access
    to these files at JHPCE.
License: Artistic-2.0
Encoding: UTF-8
LazyData: true
Imports: 
    GenomicFeatures,
    GenomeInfoDb,
    rtracklayer,
    bumphunter,
    derfinder (>= 1.21.7),
    AnnotationDbi,
    IRanges,
    org.Hs.eg.db,
    utils,
    methods,
    txdbmaker
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Suggests: 
    knitr,
    rmarkdown,
    BiocStyle,
    sessioninfo,
    testthat (>= 2.1.0),
    glue,
    derfinderPlot,
    AnnotationHubData,
    RefManageR,
    GenomicRanges,
    covr
VignetteBuilder: knitr
URL: https://github.com/LieberInstitute/GenomicState
BugReports: https://support.bioconductor.org/t/GenomicState
biocViews: Homo_sapiens, TxDb, AnnotationHub, AnnotationData
Depends: 
    AnnotationHub