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Q: Gold standard files to benchmark peak callers #101

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SuzonM opened this issue May 2, 2023 · 2 comments
Open

Q: Gold standard files to benchmark peak callers #101

SuzonM opened this issue May 2, 2023 · 2 comments
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@SuzonM
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SuzonM commented May 2, 2023

Hi, thanks for the tool! I am currently comparing a few tools to establish a multi-omic single-cell RNAseq and single-cell ATACseq pipeline. I am trying HMMRATAC and saw in the paper that you created some "golden standard" files to compare peak callers. I would like to try and reproduce this, but I cannot download the files using the link provided in the paper: it just times out. Is there any other way for me to download them somewhere?
Thanks again, cheers!
@ghost
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ghost commented Jun 5, 2023

same issue here

@hrayjones
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Me too, is it possible for you to provide this, please?

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@hrayjones @SuzonM