From 2e2d01d28d7f27ea27de147d92ce8c5f989dd41e Mon Sep 17 00:00:00 2001 From: Frank Greguska <89428916+frankinspace@users.noreply.github.com> Date: Wed, 12 Jun 2024 14:05:40 -0700 Subject: [PATCH] Issues/111: GH Action CICD (#113) * Update to a poetry-based build system * Initial pass at CI workflow * Try publishing to gitlab cr * Update build.yml * Update build.yml * attempt running deploy script * attempt running deploy script * attempt running deploy script * attempt running deploy script * attempt running deploy script * attempt running deploy script * attempt running deploy script * attempt running deploy script * attempt running deploy script * version update * Update build.yml --- .github/workflows/build.yml | 348 +++++ .github/workflows/deploy-on-runner.sh | 13 + .gitignore | 3 +- README.md | 103 +- docker/Dockerfile | 33 +- docker/docker-compose-local.yml | 1 + docker/docker-compose-maap-api.yml.tmpl | 14 + docker/docker-compose.yml | 4 +- poetry.lock | 1773 +++++++++++++++++++++++ pyproject.toml | 45 + requirements.txt | 24 - 11 files changed, 2272 insertions(+), 89 deletions(-) create mode 100644 .github/workflows/build.yml create mode 100755 .github/workflows/deploy-on-runner.sh create mode 100644 docker/docker-compose-maap-api.yml.tmpl create mode 100644 poetry.lock create mode 100644 pyproject.toml delete mode 100755 requirements.txt diff --git a/.github/workflows/build.yml b/.github/workflows/build.yml new file mode 100644 index 0000000..06772f7 --- /dev/null +++ b/.github/workflows/build.yml @@ -0,0 +1,348 @@ +# This is the main build pipeline that verifies and publishes the software +name: Build +# Controls when the workflow will run +on: + # Triggers the workflow on push events + push: + branches: + - main + - develop + - 'release/**' + - 'feature/**' + - 'issue/**' + - 'issues/**' + - 'dependabot/**' + - 'bug/**' + - 'hotfix/**' + tags-ignore: + - '*' + # Do not trigger build if pyproject.toml was the only thing changed + paths-ignore: + - 'pyproject.toml' + - 'poetry.lock' + # Allows you to run this workflow manually from the Actions tab + workflow_dispatch: + inputs: + venue: + type: choice + description: Venue to deploy to + options: + - DIT + - UAT + - OPS + +# Only allow 1 execution of this workflow to be running at any given time per-branch. +concurrency: + group: ${{ github.workflow }}-${{ github.ref }} + cancel-in-progress: true + +env: +# TERRAFORM_VERSION: "1.8.3" + REGISTRY: ghcr.io + IMAGE_NAME: ${{ github.repository }} + +jobs: + # First job in the workflow installs and verifies the software + build: + strategy: + fail-fast: false + matrix: + python-version: [ "3.9" ] + poetry-version: [ "1.8.2" ] + os: [ ubuntu-latest ] + name: Build python ${{ matrix.python-version }}, os ${{ matrix.os }} + # The type of runner that the job will run on + runs-on: ${{ matrix.os }} + defaults: + run: + shell: bash -el {0} + outputs: + deploy_env: ${{ steps.poetry-build.outputs.deploy_env }} + version: ${{ steps.poetry-build.outputs.the_version }} + pyproject_name: ${{ steps.poetry-build.outputs.pyproject_name }} + steps: + - uses: getsentry/action-github-app-token@v3 + name: maap cicd token + id: maap-cicd + with: + app_id: ${{ secrets.CICD_APP }} + private_key: ${{ secrets.CICD_APP_PRIVATE_KEY }} + - uses: actions/checkout@v4 + with: + repository: ${{ github.repository }} + token: ${{ steps.maap-cicd.outputs.token }} + - uses: actions/setup-python@v5 + with: + python-version: ${{ matrix.python-version }} + - name: Install Poetry + uses: abatilo/actions-poetry@v3 + with: + poetry-version: ${{ matrix.poetry-version }} + - name: Setup a local virtual environment + run: | + poetry config virtualenvs.create true --local + poetry config virtualenvs.in-project true --local + - uses: actions/cache@v4 + name: Define a cache for the virtual environment based on the dependencies lock file + with: + path: ./.venv + key: venv-${{ matrix.python-version }}-${{ hashFiles('poetry.lock') }} + - name: Get pre-build version + id: get-version + run: | + echo "current_version=$(poetry version | awk '{print $2}')" >> $GITHUB_OUTPUT + echo "pyproject_name=$(poetry version | awk '{print $1}')" >> $GITHUB_ENV + - name: Manual Build + # If triggered by workflow dispatch, no version bump + if: github.event_name == 'workflow_dispatch' + id: manual + run: | + echo "TARGET_ENV_UPPERCASE=${{ github.event.inputs.venue }}" >> $GITHUB_ENV + - name: Bump pre-alpha version + # If triggered by push to a non-tracked branch + if: | + github.ref != 'refs/heads/develop' && + github.ref != 'refs/heads/main' && + !startsWith(github.ref, 'refs/heads/release/') + run: | + new_ver="${{ steps.get-version.outputs.current_version }}+$(git rev-parse --short ${GITHUB_SHA})" + poetry version $new_ver + echo "TARGET_ENV_UPPERCASE=DIT" >> $GITHUB_ENV + - name: Bump alpha version + # If triggered by push to the develop branch + if: | + github.ref == 'refs/heads/develop' && + steps.manual.conclusion == 'skipped' + id: alpha + run: | + poetry version prerelease + echo "TARGET_ENV_UPPERCASE=DIT" >> $GITHUB_ENV + - name: Bump rc version + # If triggered by push to a release branch + if: | + startsWith(github.ref, 'refs/heads/release/') && + steps.manual.conclusion == 'skipped' + id: rc + env: + # True if the version already has a 'rc' pre-release identifier + BUMP_RC: ${{ contains(steps.get-version.outputs.current_version, 'rc') }} + run: | + if [ "$BUMP_RC" = true ]; then + poetry version prerelease + else + poetry version ${GITHUB_REF#refs/heads/release/}rc1 + fi + echo "TARGET_ENV_UPPERCASE=UAT" >> $GITHUB_ENV + - name: Release version + # If triggered by push to the main branch + if: | + startsWith(github.ref, 'refs/heads/main') && + steps.manual.conclusion == 'skipped' + id: release + env: + CURRENT_VERSION: ${{ steps.get-version.outputs.current_version }} + # Remove rc* from end of version string + # The ${string%%substring} syntax below deletes the longest match of $substring from back of $string. + run: | + poetry version ${CURRENT_VERSION%%rc*} + echo "software_version=$(poetry version | awk '{print $2}')" >> $GITHUB_ENV + echo "venue=ops" >> $GITHUB_ENV + echo "TARGET_ENV_UPPERCASE=OPS" >> $GITHUB_ENV + - name: Get install version + # Get the version of the software being installed and save it as an ENV var + run: | + echo "software_version=$(poetry version | awk '{print $2}')" >> $GITHUB_ENV + - name: Install package + run: poetry install + - name: Lint + run: | + echo "Lint your code" + - name: Test and coverage + run: | + echo "Run your tests" +# - uses: hashicorp/setup-terraform@v3 +# with: +# terraform_version: ${{ env.TERRAFORM_VERSION }} +# terraform_wrapper: false +# - name: Validate Terraform +# working-directory: terraform +# run: | +# terraform init -backend=false +# terraform validate -no-color + +# SONAR support is pending approval +# - name: SonarCloud Scan +# uses: sonarsource/sonarcloud-github-action@master +# env: +# GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} +# SONAR_TOKEN: ${{ secrets.SONAR_TOKEN }} +# with: +# args: > +# -Dsonar.organization=${{ github.repository_owner }} +# -Dsonar.projectKey=${{ github.repository_owner }}_${{ github.event.repository.name }} +# -Dsonar.python.coverage.reportPaths=build/reports/coverage.xml +# -Dsonar.sources=api/ +# -Dsonar.tests=tests/ +# -Dsonar.projectName=${{ github.repository }} +# -Dsonar.projectVersion=${{ env.software_version }} +# -Dsonar.python.version=3.9,3.10 + + - name: Build Python Artifact + id: poetry-build + run: | + poetry build + echo "deploy_env=${{ env.TARGET_ENV_UPPERCASE }}" >> $GITHUB_OUTPUT + echo "the_version=$(poetry version | awk '{print $2}')" >> $GITHUB_OUTPUT + echo "pyproject_name=$(poetry version | awk '{print $1}')" >> $GITHUB_OUTPUT + - uses: actions/upload-artifact@v4 + with: + name: ${{ steps.poetry-build.outputs.pyproject_name }}-dist + path: dist/* + - name: Commit Version Bump + # If building an alpha, release candidate, or release then we commit the version bump back to the repo + if: | + steps.alpha.conclusion == 'success' || + steps.rc.conclusion == 'success' || + steps.release.conclusion == 'success' + run: | + git config user.name "${GITHUB_ACTOR}" + git config user.email "${GITHUB_ACTOR}@users.noreply.github.com" + git commit -am "/version ${{ env.software_version }}" + git push + - name: Push Tag + if: | + steps.alpha.conclusion == 'success' || + steps.rc.conclusion == 'success' || + steps.release.conclusion == 'success' + run: | + git config user.name "${GITHUB_ACTOR}" + git config user.email "${GITHUB_ACTOR}@users.noreply.github.com" + git tag -a "${{ env.software_version }}" -m "Version ${{ env.software_version }}" + git push origin "${{ env.software_version }}" + - name: Create GH release + if: | + steps.alpha.conclusion == 'success' || + steps.rc.conclusion == 'success' || + steps.release.conclusion == 'success' + uses: ncipollo/release-action@v1 + with: + generateReleaseNotes: true + name: ${{ env.software_version }} + prerelease: ${{ steps.alpha.conclusion == 'success' || steps.rc.conclusion == 'success'}} + tag: ${{ env.software_version }} + + docker: + name: Build & Publish Docker Image + runs-on: ubuntu-latest + permissions: + packages: write + needs: build + environment: ${{ needs.build.outputs.deploy_env }} # Only needed because we need to push to the environment-specific GitLab CR. If we move to a container registry that is not env-specific this can be removed + outputs: + ghcr_container_image_uri: ${{ steps.set-outputs.outputs.ghcr_container_image_uri }} + gitlab_container_image_uri: ${{ steps.set-outputs.outputs.gitlab_container_image_uri }} + env: + THE_VERSION: ${{ needs.build.outputs.version }} + PYPROJECT_NAME: ${{ needs.build.outputs.pyproject_name }} + steps: + - uses: actions/checkout@v4 + with: + repository: ${{ github.repository }} + + - name: Log in to GitHub CR + uses: docker/login-action@v3 + with: + registry: ${{ env.REGISTRY }} + username: ${{ github.repository_owner }} + password: ${{ secrets.GITHUB_TOKEN }} + + - name: Log in to GitLab CR + uses: docker/login-action@v3 + with: + registry: ${{ vars.GITLAB_CONTAINER_REGISTRY }} + username: gitlab+deploy-token-2 + password: ${{ secrets.MAAP_API_NASA_CI_GH_ACTION_TOKEN }} + + - name: Extract metadata (tags, labels) for Docker + id: meta + uses: docker/metadata-action@v5 + with: + images: | + ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }} + ${{ vars.GITLAB_CONTAINER_REGISTRY }}/${{ env.IMAGE_NAME }} + tags: | + type=pep440,pattern={{version}},value=${{ env.THE_VERSION }} + type=raw,value=${{ needs.build.outputs.deploy_env }} + - name: Build and push Docker image + if: | + github.ref == 'refs/heads/develop' || + github.ref == 'refs/heads/main' || + startsWith(github.ref, 'refs/heads/release') || + github.event_name == 'workflow_dispatch' + uses: docker/build-push-action@v5 + with: + context: . + file: docker/Dockerfile + push: true + pull: true + tags: ${{ steps.meta.outputs.tags }} + labels: ${{ steps.meta.outputs.labels }} + - name: Set output + id: set-outputs + run: | + echo "ghcr_container_image_uri=${{ fromJSON(steps.meta.outputs.json).tags[0] }}" >> $GITHUB_OUTPUT + echo "gitlab_container_image_uri=${{ fromJSON(steps.meta.outputs.json).tags[3] }}" >> $GITHUB_OUTPUT + + deploy: + name: Deploy + needs: [ build, docker ] +# runs-on: [${{ needs.build.outputs.deploy_env }}, self-hosted] + runs-on: ubuntu-latest + environment: ${{ needs.build.outputs.deploy_env }} + env: + THE_VERSION: ${{ needs.build.outputs.version }} + GHCR_CONTAINER_IMAGE_URI: ${{ needs.docker.outputs.ghcr_container_image_uri }} + GITLAB_CONTAINER_IMAGE_URI: ${{ needs.docker.outputs.gitlab_container_image_uri }} + if: | + github.ref == 'refs/heads/develop' || + github.ref == 'refs/heads/main' || + startsWith(github.ref, 'refs/heads/release') || + github.event_name == 'workflow_dispatch' + steps: + - uses: actions/checkout@v4 + with: + repository: ${{ github.repository }} +# - uses: hashicorp/setup-terraform@v3 +# with: +# terraform_version: ${{ env.TERRAFORM_VERSION }} +# terraform_wrapper: false + +# - name: Configure AWS credentials +# uses: aws-actions/configure-aws-credentials@v4 +# with: +# aws-region: us-west-2 +# role-session-name: GitHubActions +# aws-access-key-id: ${{ secrets[vars.AWS_ACCESS_KEY_ID_SECRET_NAME] }} +# aws-secret-access-key: ${{ secrets[vars.AWS_SECRET_ACCESS_KEY_SECRET_NAME] }} +# mask-aws-account-id: true + + # TODO run deploy script on self-hosted runner + - name: Create env file + id: create-env + shell: bash + env: + ENV_FILE: ${{secrets.MAAP_API_SETTINGS_OVERRIDE}} + run: 'echo "$ENV_FILE" > ${GITHUB_WORKSPACE}/.github/workflows/.maap-api.env' + - name: Deploy to venue + id: deploy + env: + AWS_DEFAULT_REGION: us-west-2 + API_IMAGE_NAME: ${{ env.GITLAB_CONTAINER_IMAGE_URI }} + API_MACHINE: ${{ secrets.API_MACHINE }} + run: | + echo "Deploy ${{ env.API_IMAGE_NAME }} to ${{ needs.build.outputs.deploy_env }}" + ${GITHUB_WORKSPACE}/.github/workflows/deploy-on-runner.sh + - name: Clean env file + shell: bash + if: ${{always() && steps.create-env.outcome == 'success'}} + run: 'rm ${GITHUB_WORKSPACE}/.github/workflows/.maap-api.env || true' diff --git a/.github/workflows/deploy-on-runner.sh b/.github/workflows/deploy-on-runner.sh new file mode 100755 index 0000000..dd8160d --- /dev/null +++ b/.github/workflows/deploy-on-runner.sh @@ -0,0 +1,13 @@ +#!/usr/bin/env bash + +set -exo pipefail + +# # Make sure to add the public key of the CI machine to the authorized keys of the api machine +ssh "${API_MACHINE}" "docker-compose -f docker-compose-maap-api.yml down" +# Copy new file after compose down on api machine +cat "${GITHUB_WORKSPACE}"/docker/docker-compose-maap-api.yml.tmpl | envsubst >> docker-compose-maap-api.yml +scp -v docker-compose-maap-api.yml "${API_MACHINE}":~/ +scp -v .maap-api.env "${API_MACHINE}":~/.maap-api.env + +ssh "${API_MACHINE}" "docker-compose -f docker-compose-maap-api.yml pull" +ssh "${API_MACHINE}" "docker-compose -f docker-compose-maap-api.yml up -d" diff --git a/.gitignore b/.gitignore index fb2aa64..3421864 100644 --- a/.gitignore +++ b/.gitignore @@ -12,4 +12,5 @@ local_notes.txt local *.DS_Store /docker/data -docker/logs/ \ No newline at end of file +docker/logs/ +/logs/ \ No newline at end of file diff --git a/README.md b/README.md index 3385c3e..053424b 100755 --- a/README.md +++ b/README.md @@ -10,50 +10,42 @@ cd docker docker-compose -f docker-compose-local.yml up ``` -## II. Local development using python virtualenv +## II. Local development using poetry and virtualenv **Prerequisites:** - +* poetry + * https://python-poetry.org/docs/#installation * postgresql * Linux: `sudo apt-get install postgresql python-psycopy2 libpq-dev` * Mac OSx: `brew install postgresql` -* pip, python3.7 and virtualenv +* python3.9+ ```bash -python3 -m venv venv -source maap-api-nasa/bin/activate -pip3 install -r requirements.txt +cd maap-api-nasa +poetry install ``` ### First run: Configure the database. -1. Add the new postgres user (A fix for 'role does not exist'): - -Note: You may need to use `sudo -u postgres ` before postgres commands. - -```bash -# For example -# $ create user tonhai # or -# $ sudo -u postgres createuser tonhai -createuser -``` - -2. create an empty postgres db (maap_dev) (a fix for 'database maap_dev does not exist'): +1. Add a new user called `maapuser` (A fix for 'role does not exist') + > **_NOTE:_** You may need to use `sudo -u postgres` before postgres commands. + ```bash + createuser maapuser + ``` -```bash -psql # or $ sudo -u postgres psql -(in postgres shell): create database maap_dev; -(in postgres shell): \q -``` +2. Create an empty postgres db (maap) (a fix for 'database maap does not exist'): + ```bash + createdatabase maap + ``` 3. OPTIONAL: PyCharm configuration, if using the PyCharm IDE: - Script path: `./api/maapapp.py` - Environment variables: `PYTHONUNBUFFERED=1` -- Python interpreter: `Python 3.7` +- Python interpreter: `Python 3.9` - Working directory: `./api` -#### Config Titiler endpoint and maap-api-host +#### (Obsolete?) Config Titiler endpoint and maap-api-host In the settings.py (i.e., maap-api-nasa/api/settings.py): @@ -68,57 +60,54 @@ TILER_ENDPOINT = 'https://XXX.execute-api.us-east-1.amazonaws.com' # If running the tiler locally, this can be TILER_ENDPOINT = 'http://localhost:8000' ``` -### You can run then app: +### Run the app: ```bash +poetry shell FLASK_APP=api/maapapp.py flask run --host=0.0.0.0 ``` -### Some issues you may experience while running the above line: - -#### Allowing using postgres without login (A fix for 'fe_sendauth: no password supplied'): - -```bash -sudo vi /etc/postgresql/9.5/main/pg_hba.conf #(the location may be different depend on OS and postgres version) -``` +Some issues you may experience while running the above line: -``` -# Reconfig as follows: - local all all trust - host all all 127.0.0.1/32 trust - host all all ::1/0 trust -# Save pg_hba.conf -``` +* Allowing using postgres without login (A fix for 'fe_sendauth: no password supplied'): -```bash -# Restart postgresql -sudo /etc/init.d/postgresql reload -sudo /etc/init.d/postgresql start -``` + ```bash + sudo vi /etc/postgresql/9.5/main/pg_hba.conf #(the location may be different depend on OS and postgres version) + ``` + + ``` + # Reconfig as follows: + local all all trust + host all all 127.0.0.1/32 trust + host all all ::1/0 trust + # Save pg_hba.conf + ``` -#### 5. Rerun: + ```bash + # Restart postgresql + sudo /etc/init.d/postgresql reload + sudo /etc/init.d/postgresql start + ``` -```bash -# Run the maap-api-nasa services locally -FLASK_APP=api/maapapp.py flask run --host=0.0.0.0 -``` +### Running tests -And run a test: +When using docker-compose to start the app it is possible to run the tests locally if you first +update the settings.py `DATABASE_URL` value to specify `localhost` as the servername instead of `db` +(DO NOT check in this change). ```bash -python3 -m unittest test/api/endpoints/test_wmts_get_tile.py +python -m unittest test/api/endpoints/test_wmts_get_tile.py ``` -### If you are running the latest version of Titiler, use the following local test scripts: - +If you are running the latest version of Titiler, use the following local test scripts: while keeping the server in the previous step running (i.e., local maap-api-nasa). Open a new terminal ```bash -source maap-api-nasa/bin/activate # or whatever environment name you choose in the previous step +poetry env use $(poetry env info -e) #If you are running the latest version of Titiler, then use the following test scripts: -python3 -m unittest -v test/api/endpoints/test_wmts_get_tile_new_titiler.py -python3 -m unittest -v test/api/endpoints/test_wmts_get_capabilities_new_titiler.py +python -m unittest -v test/api/endpoints/test_wmts_get_tile_new_titiler.py +python -m unittest -v test/api/endpoints/test_wmts_get_capabilities_new_titiler.py ``` ## III. User Accounts diff --git a/docker/Dockerfile b/docker/Dockerfile index 790c169..2d25669 100644 --- a/docker/Dockerfile +++ b/docker/Dockerfile @@ -1,8 +1,31 @@ -FROM python:3.9 -RUN apt-get update && apt-get clean all +FROM python:3.9 as builder + +# Install Poetry +RUN curl -sSL https://install.python-poetry.org | python3 - + +ENV PATH="${PATH}:/root/.local/bin" \ + POETRY_NO_INTERACTION=1 \ + POETRY_VIRTUALENVS_IN_PROJECT=1 \ + POETRY_VIRTUALENVS_CREATE=1 \ + POETRY_CACHE_DIR=/tmp/poetry_cache WORKDIR /maap-api-nasa -COPY . . -COPY api/settings.py api/settings.py -RUN pip3 install -r requirements.txt + +COPY pyproject.toml poetry.lock ./ +RUN touch README.md + +RUN poetry install --without dev --no-root && rm -rf $POETRY_CACHE_DIR + +FROM python:3.9-slim as runtime + +ENV VIRTUAL_ENV=/maap-api-nasa/.venv \ + PATH="/maap-api-nasa/.venv/bin:$PATH" + +COPY --from=builder ${VIRTUAL_ENV} ${VIRTUAL_ENV} + +COPY api /maap-api-nasa/api +COPY api/settings.py /maap-api-nasa/api/settings.py +COPY logging.conf /maap-api-nasa/logging.conf +RUN mkdir /logs + diff --git a/docker/docker-compose-local.yml b/docker/docker-compose-local.yml index ec916cf..a3460aa 100644 --- a/docker/docker-compose-local.yml +++ b/docker/docker-compose-local.yml @@ -6,6 +6,7 @@ services: build: context: ../ dockerfile: docker/Dockerfile + target: runtime depends_on: db: condition: service_healthy diff --git a/docker/docker-compose-maap-api.yml.tmpl b/docker/docker-compose-maap-api.yml.tmpl new file mode 100644 index 0000000..19a2e7f --- /dev/null +++ b/docker/docker-compose-maap-api.yml.tmpl @@ -0,0 +1,14 @@ +version: '3.8' +services: + api: + container_name: 'maap-api-nasa' + image: ${API_IMAGE_NAME} + ports: + - "5000:5000" + volumes: + - ./logs:/maap-api-nasa/logs/ + command: > + sh -c "gunicorn --bind 0.0.0.0:5000 api.maapapp:app -w 5" + env_file: + - .maap-api.env + restart: always diff --git a/docker/docker-compose.yml b/docker/docker-compose.yml index 19e0ff6..28f3fb9 100644 --- a/docker/docker-compose.yml +++ b/docker/docker-compose.yml @@ -6,6 +6,7 @@ services: build: context: ../ dockerfile: docker/Dockerfile + target: runtime networks: - default ports: @@ -21,5 +22,4 @@ services: driver: "json-file" options: max-size: 250m - max-file: 10 - retries: 50 + max-file: 10 \ No newline at end of file diff --git a/poetry.lock b/poetry.lock new file mode 100644 index 0000000..123e0a7 --- /dev/null +++ b/poetry.lock @@ -0,0 +1,1773 @@ +# This file is automatically @generated by Poetry 1.8.2 and should not be changed by hand. + +[[package]] +name = "aniso8601" +version = "9.0.1" +description = "A library for parsing ISO 8601 strings." +optional = false +python-versions = "*" +files = [ + {file = "aniso8601-9.0.1-py2.py3-none-any.whl", hash = "sha256:1d2b7ef82963909e93c4f24ce48d4de9e66009a21bf1c1e1c85bdd0812fe412f"}, + {file = "aniso8601-9.0.1.tar.gz", hash = "sha256:72e3117667eedf66951bb2d93f4296a56b94b078a8a95905a052611fb3f1b973"}, +] + +[package.extras] +dev = 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