diff --git a/.github/workflows/environment.yml b/.github/workflows/environment.yml
index 29be3eea..c19381b8 100644
--- a/.github/workflows/environment.yml
+++ b/.github/workflows/environment.yml
@@ -1,438 +1,130 @@
-name: SPARCSpy
+name: SPARCSminimal
channels:
- - pytorch
- - anaconda
- conda-forge
dependencies:
- - alabaster=0.7.16=pyhd8ed1ab_0
- - aom=3.9.0=h537b5a7_0
- - appnope=0.1.2=py310hca03da5_1001
- - asciitree=0.3.3=py_2
- - asttokens=2.0.5=pyhd3eb1b0_0
- - atk-1.0=2.38.0=hd03087b_2
- - attrs=23.2.0=pyh71513ae_0
- - aws-c-auth=0.7.22=hec39e38_2
- - aws-c-cal=0.6.14=h5db4892_1
- - aws-c-common=0.9.19=h99b78c6_0
- - aws-c-compression=0.2.18=h5db4892_6
- - aws-c-event-stream=0.4.2=h5eab607_12
- - aws-c-http=0.8.1=had10953_17
- - aws-c-io=0.14.8=hb5a7b21_5
- - aws-c-mqtt=0.10.4=h78534b8_4
- - aws-c-s3=0.5.9=h1755d02_3
- - aws-c-sdkutils=0.1.16=h5db4892_2
- - aws-checksums=0.1.18=h5db4892_6
- - aws-crt-cpp=0.26.9=h03bff2b_0
- - aws-sdk-cpp=1.11.329=hb37a6d0_3
- - backcall=0.2.0=pyhd3eb1b0_0
- - beautifulsoup4=4.12.3=pyha770c72_0
- - bleach=6.1.0=pyhd8ed1ab_0
- - blessed=1.19.1=pyhe4f9e05_2
- - blosc=1.21.5=h9c252e8_1
- - bokeh=3.4.1=pyhd8ed1ab_0
- - brotli=1.1.0=hb547adb_1
- - brotli-bin=1.1.0=hb547adb_1
- - brotli-python=1.1.0=py310h1253130_1
- - brunsli=0.1=h9f76cd9_0
- - bzip2=1.0.8=h93a5062_5
- - c-ares=1.28.1=h93a5062_0
- - c-blosc2=2.14.4=ha57e6be_1
- - ca-certificates=2024.2.2=hf0a4a13_0
- - cairo=1.18.0=hd1e100b_0
- - cairomm-1.16=1.16.2=h136753c_1
- - cellpose=3.0.8=pyhd8ed1ab_0
- - certifi=2024.2.2=pyhd8ed1ab_0
- - cffi=1.16.0=py310hdcd7c05_0
- - charls=2.4.2=h13dd4ca_0
- - charset-normalizer=3.3.2=pyhd8ed1ab_0
- - click=8.1.7=unix_pyh707e725_0
- - cloudpickle=3.0.0=pyhd8ed1ab_0
- - colorama=0.4.6=pyhd8ed1ab_0
- - contourpy=1.2.1=py310h21239e6_0
- - cycler=0.12.1=pyhd8ed1ab_0
- - cytoolz=0.12.3=py310hd125d64_0
- - dask=2024.5.1=pyhd8ed1ab_0
- - dask-core=2024.5.1=pyhd8ed1ab_0
- - dask-expr=1.1.1=pyhd8ed1ab_1
- - dask-image=2024.5.3=pyhd8ed1ab_0
- - dav1d=1.2.1=hb547adb_0
- - debugpy=1.6.7=py310h313beb8_0
- - decorator=5.1.1=pyhd3eb1b0_0
- - defusedxml=0.7.1=pyhd8ed1ab_0
- - distributed=2024.5.1=pyhd8ed1ab_0
- - entrypoints=0.4=pyhd8ed1ab_0
- - epoxy=1.5.10=h1c322ee_1
- - exceptiongroup=1.0.4=py310hca03da5_0
- - executing=0.8.3=pyhd3eb1b0_0
- - expat=2.6.2=hebf3989_0
- - fastremap=1.14.0=py310he53c7d2_1
- - ffmpeg=6.1.1=gpl_hc16618e_112
- - filelock=3.14.0=pyhd8ed1ab_0
- - font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- - font-ttf-inconsolata=3.000=h77eed37_0
- - font-ttf-source-code-pro=2.038=h77eed37_0
- - font-ttf-ubuntu=0.83=h77eed37_2
- - fontconfig=2.14.2=h82840c6_0
- - fonts-conda-ecosystem=1=0
- - fonts-conda-forge=1=0
- - fonttools=4.52.4=py310ha6dd24b_0
- - freetype=2.12.1=hadb7bae_2
- - fribidi=1.0.10=h27ca646_0
- - gdk-pixbuf=2.42.12=h7ddc832_0
- - gettext=0.22.5=h8fbad5d_2
- - gettext-tools=0.22.5=h8fbad5d_2
- - gflags=2.2.2=hc88da5d_1004
- - giflib=5.2.2=h93a5062_0
- - glib=2.80.2=h535f939_0
- - glib-tools=2.80.2=h4c882b9_0
- - glog=0.7.0=hc6770e3_0
- - gmp=6.3.0=hebf3989_1
- - gmpy2=2.1.5=py310h3bc658a_1
- - gnutls=3.7.9=hd26332c_0
- - graph-tool=2.68=py310h5b70238_1001
- - graph-tool-base=2.68=py310ha05df7a_1001
- - graphite2=1.3.13=hebf3989_1003
- - gst-plugins-base=1.24.4=h8a8f8c8_0
- - gstreamer=1.24.4=h430e707_0
- - gtk3=3.24.42=hcad41e0_0
- - harfbuzz=8.5.0=h1836168_0
- - hdf5=1.14.3=nompi_hec07895_102
- - hicolor-icon-theme=0.17=hce30654_2
- - icu=73.2=hc8870d7_0
- - idna=3.7=pyhd8ed1ab_0
- - imagecodecs=2024.1.1=py310hfb4dfaf_7
- - imageio=2.34.1=pyh4b66e23_0
- - imagesize=1.4.1=pyhd8ed1ab_0
- - imath=3.1.11=h1059232_0
- - importlib-metadata=7.1.0=pyha770c72_0
- - importlib_metadata=7.1.0=hd8ed1ab_0
- - importlib_resources=6.4.0=pyhd8ed1ab_0
- - ipykernel=6.25.0=py310h33ce5c2_0
- - ipython=8.15.0=py310hca03da5_0
- - jasper=4.2.4=h6c4e4ef_0
- - jedi=0.18.1=py310hca03da5_1
- - jinja2=3.1.4=pyhd8ed1ab_0
- - joblib=1.4.2=pyhd8ed1ab_0
- - jsonschema=4.22.0=pyhd8ed1ab_0
- - jsonschema-specifications=2023.12.1=pyhd8ed1ab_0
- - jupyter_client=8.6.0=py310hca03da5_0
- - jupyter_core=5.5.0=py310hca03da5_0
- - jupyterlab_pygments=0.3.0=pyhd8ed1ab_1
- - jxrlib=1.1=h93a5062_3
- - kiwisolver=1.4.5=py310h38f39d4_1
- - krb5=1.21.2=h92f50d5_0
- - lame=3.100=h1a8c8d9_1003
- - lazy_loader=0.4=pyhd8ed1ab_0
- - lcms2=2.16=ha0e7c42_0
- - lerc=4.0.0=h9a09cb3_0
- - libabseil=20240116.2=cxx17_hebf3989_0
- - libaec=1.1.3=hebf3989_0
- - libarrow=16.1.0=h28dd788_6_cpu
- - libarrow-acero=16.1.0=h00cdb27_6_cpu
- - libarrow-dataset=16.1.0=h00cdb27_6_cpu
- - libarrow-substrait=16.1.0=hc68f6b8_6_cpu
- - libasprintf=0.22.5=h8fbad5d_2
- - libasprintf-devel=0.22.5=h8fbad5d_2
- - libass=0.17.1=hf7da4fe_1
- - libavif16=1.0.4=hb18d617_4
- - libblas=3.9.0=19_osxarm64_openblas
- - libboost=1.82.0=h489e689_6
- - libboost-python=1.82.0=py310h0d5016b_6
- - libbrotlicommon=1.1.0=hb547adb_1
- - libbrotlidec=1.1.0=hb547adb_1
- - libbrotlienc=1.1.0=hb547adb_1
- - libcblas=3.9.0=19_osxarm64_openblas
- - libclang-cpp15=15.0.7=default_he012953_5
- - libclang13=18.1.6=default_h174537c_0
- - libcrc32c=1.1.2=hbdafb3b_0
- - libcurl=8.8.0=h7b6f9a7_0
- - libcxx=17.0.6=h5f092b4_0
- - libdeflate=1.20=h93a5062_0
- - libedit=3.1.20191231=hc8eb9b7_2
- - libev=4.33=h93a5062_2
- - libevent=2.1.12=h2757513_1
- - libexpat=2.6.2=hebf3989_0
- - libffi=3.4.2=h3422bc3_5
- - libgettextpo=0.22.5=h8fbad5d_2
- - libgettextpo-devel=0.22.5=h8fbad5d_2
- - libgfortran=5.0.0=13_2_0_hd922786_3
- - libgfortran5=13.2.0=hf226fd6_3
- - libgirepository=1.80.1=hee7aab5_0
- - libglib=2.80.2=h535f939_0
- - libgoogle-cloud=2.24.0=hfe08963_0
- - libgoogle-cloud-storage=2.24.0=h3fa5b87_0
- - libgrpc=1.62.2=h9c18a4f_0
- - libhwloc=2.10.0=default_h7685b71_1001
- - libhwy=1.1.0=h2ffa867_0
- - libiconv=1.17=h0d3ecfb_2
- - libidn2=2.3.7=h93a5062_0
- - libintl=0.22.5=h8fbad5d_2
- - libintl-devel=0.22.5=h8fbad5d_2
- - libjpeg-turbo=3.0.0=hb547adb_1
- - libjxl=0.10.2=h07599a0_0
- - liblapack=3.9.0=19_osxarm64_openblas
- - liblapacke=3.9.0=19_osxarm64_openblas
- - libllvm14=14.0.6=hd1a9a77_4
- - libllvm15=15.0.7=h2621b3d_4
- - libllvm18=18.1.6=hdac5640_0
- - libnghttp2=1.58.0=ha4dd798_1
- - libogg=1.3.4=h27ca646_1
- - libopenblas=0.3.24=openmp_hd76b1f2_0
- - libopencv=4.9.0=headless_py310h76ded59_15
- - libopenvino=2024.1.0=h5c9529b_7
- - libopenvino-arm-cpu-plugin=2024.1.0=h5c9529b_7
- - libopenvino-auto-batch-plugin=2024.1.0=hcd65546_7
- - libopenvino-auto-plugin=2024.1.0=hcd65546_7
- - libopenvino-hetero-plugin=2024.1.0=h88cb26a_7
- - libopenvino-ir-frontend=2024.1.0=h88cb26a_7
- - libopenvino-onnx-frontend=2024.1.0=h32b5460_7
- - libopenvino-paddle-frontend=2024.1.0=h32b5460_7
- - libopenvino-pytorch-frontend=2024.1.0=h00cdb27_7
- - libopenvino-tensorflow-frontend=2024.1.0=h2741c3b_7
- - libopenvino-tensorflow-lite-frontend=2024.1.0=h00cdb27_7
- - libopus=1.3.1=h27ca646_1
- - libparquet=16.1.0=hcf52c46_6_cpu
- - libpng=1.6.43=h091b4b1_0
- - libpq=16.3=h7afe498_0
- - libprotobuf=4.25.3=hbfab5d5_0
- - libre2-11=2023.09.01=h7b2c953_2
- - librsvg=2.58.0=hb3d354b_1
- - libsodium=1.0.18=h1a28f6b_0
- - libsqlite=3.45.3=h091b4b1_0
- - libssh2=1.11.0=h7a5bd25_0
- - libtasn1=4.19.0=h1a8c8d9_0
- - libthrift=0.19.0=h026a170_1
- - libtiff=4.6.0=h07db509_3
- - libunistring=0.9.10=h3422bc3_0
- - libutf8proc=2.8.0=h1a8c8d9_0
- - libvorbis=1.3.7=h9f76cd9_0
- - libvpx=1.14.0=h078ce10_0
- - libwebp-base=1.4.0=h93a5062_0
- - libxcb=1.15=hf346824_0
- - libxml2=2.12.7=ha661575_0
- - libzlib=1.2.13=hfb2fe0b_6
- - libzopfli=1.0.3=h9f76cd9_0
- - lightning-utilities=0.11.2=pyhd8ed1ab_0
- - llvm-openmp=18.1.6=hde57baf_0
- - llvmlite=0.42.0=py310hf7687f1_1
- - locket=1.0.0=pyhd8ed1ab_0
- - lz4=4.3.3=py310haecba8d_0
- - lz4-c=1.9.4=hb7217d7_0
- - mahotas=1.4.15=py310h2216879_1
- - markupsafe=2.1.5=py310hd125d64_0
- - matplotlib=3.8.4=py310hb6292c7_2
- - matplotlib-base=3.8.4=py310hedb7998_2
- - matplotlib-inline=0.1.6=py310hca03da5_0
- - mistune=3.0.2=pyhd8ed1ab_0
- - mpc=1.3.1=h91ba8db_0
- - mpfr=4.2.1=h41d338b_1
- - mpmath=1.3.0=pyhd8ed1ab_0
- - msgpack-python=1.0.8=py310he1a186f_0
- - munkres=1.1.4=pyh9f0ad1d_0
- - mysql-common=8.3.0=hd1853d3_4
- - mysql-libs=8.3.0=hf036fc4_4
- - natsort=8.4.0=pyhd8ed1ab_0
- - nbclient=0.10.0=pyhd8ed1ab_0
- - nbconvert=7.16.4=hd8ed1ab_0
- - nbconvert-core=7.16.4=pyhd8ed1ab_0
- - nbconvert-pandoc=7.16.4=hd8ed1ab_0
- - nbformat=5.10.4=pyhd8ed1ab_0
- - nbsphinx=0.9.4=pyhd8ed1ab_0
- - ncurses=6.5=hb89a1cb_0
- - nest-asyncio=1.5.6=py310hca03da5_0
- - nettle=3.9.1=h40ed0f5_0
- - networkx=3.3=pyhd8ed1ab_1
- - nspr=4.35=hb7217d7_0
- - nss=3.100=hc6e9f88_0
- - numba=0.59.1=py310hdf1f89a_0
- - numcodecs=0.12.1=py310hcf9f62a_1
- - numpy=1.26.4=py310hd45542a_0
- - opencv=4.9.0=headless_py310hf593829_15
- - openexr=3.2.2=h2c51e1d_1
- - openh264=2.4.1=hebf3989_0
- - openjdk=22.0.1=hbeb2e11_0
- - openjpeg=2.5.2=h9f1df11_0
- - openssl=3.3.0=hfb2fe0b_3
- - orc=2.0.1=h47ade37_1
- - p11-kit=0.24.1=h29577a5_0
- - packaging=24.0=pyhd8ed1ab_0
- - pandas=2.2.2=py310h2216879_1
- - pandoc=3.2=hce30654_0
- - pandocfilters=1.5.0=pyhd8ed1ab_0
- - pango=1.52.2=hb067d4f_0
- - parso=0.8.3=pyhd3eb1b0_0
- - partd=1.4.2=pyhd8ed1ab_0
- - pcre2=10.43=h26f9a81_0
- - pexpect=4.8.0=pyhd3eb1b0_3
- - pickleshare=0.7.5=pyhd3eb1b0_1003
- - pillow=10.3.0=py310h81a8c2e_0
- - pims=0.6.1=pyhd8ed1ab_1
- - pip=24.0=pyhd8ed1ab_0
- - pixman=0.43.4=hebf3989_0
- - pkgutil-resolve-name=1.3.10=pyhd8ed1ab_1
- - platformdirs=3.10.0=py310hca03da5_0
- - ply=3.11=pyhd8ed1ab_2
- - prompt-toolkit=3.0.36=py310hca03da5_0
- - psutil=5.9.8=py310hd125d64_0
- - pthread-stubs=0.4=h27ca646_1001
- - ptyprocess=0.7.0=pyhd3eb1b0_2
- - pugixml=1.14=h13dd4ca_0
- - pure_eval=0.2.2=pyhd3eb1b0_0
- - py-opencv=4.9.0=headless_py310h1882dd7_15
- - pyarrow=16.1.0=py310h7ed268f_1
- - pyarrow-core=16.1.0=py310h75075a0_1_cpu
- - pyarrow-hotfix=0.6=pyhd8ed1ab_0
- - pycairo=1.26.0=py310hea34faf_0
- - pyconify=0.1.6=pyhd8ed1ab_0
- - pycparser=2.22=pyhd8ed1ab_0
- - pygments=2.18.0=pyhd8ed1ab_0
- - pygobject=3.48.2=py310h5ffc74c_0
- - pyparsing=3.1.2=pyhd8ed1ab_0
- - pyqt=5.15.9=py310h2924129_5
- - pyqt5-sip=12.12.2=py310h1253130_5
- - pyqtgraph=0.13.7=pyhd8ed1ab_0
- - pysocks=1.7.1=pyha2e5f31_6
- - python=3.10.14=h2469fbe_0_cpython
- - python-dateutil=2.9.0=pyhd8ed1ab_0
- - python-fastjsonschema=2.19.1=pyhd8ed1ab_0
- - python-tzdata=2024.1=pyhd8ed1ab_0
- - python_abi=3.10=4_cp310
- - pytorch=2.2.2=py3.10_0
- - pytorch-lightning=2.2.2=pyhd8ed1ab_0
- - pytz=2024.1=pyhd8ed1ab_0
- - pywavelets=1.4.1=py310h280b8fa_1
- - pyyaml=6.0.1=py310h2aa6e3c_1
- - pyzmq=25.1.0=py310h313beb8_0
- - qt-main=5.15.8=hf679f28_21
- - qtpy=2.4.1=pyhd8ed1ab_0
- - rav1e=0.6.6=h69fbcac_2
- - re2=2023.09.01=h4cba328_2
- - readline=8.2=h92ec313_1
- - referencing=0.35.1=pyhd8ed1ab_0
- - requests=2.32.3=pyhd8ed1ab_0
- - roifile=2024.5.24=pyhd8ed1ab_0
- - rpds-py=0.18.1=py310h947b723_0
- - scikit-image=0.19.3=py310h2b830bf_2
- - scikit-learn=1.5.0=py310h64e73be_1
- - scipy=1.13.1=py310h7057308_0
- - setuptools=70.0.0=pyhd8ed1ab_0
- - sigcpp-3.0=3.6.0=h13dd4ca_0
- - sip=6.8.3=py310h692a8b6_0
- - six=1.16.0=pyh6c4a22f_0
- - slicerator=1.1.0=pyhd8ed1ab_0
- - snappy=1.2.0=hd04f947_1
- - snowballstemmer=2.2.0=pyhd8ed1ab_0
- - sortedcontainers=2.4.0=pyhd8ed1ab_0
- - soupsieve=2.5=pyhd8ed1ab_1
- - sparsehash=2.0.4=hb7217d7_1
- - sphinx=7.3.7=pyhd8ed1ab_0
- - sphinxcontrib-applehelp=1.0.8=pyhd8ed1ab_0
- - sphinxcontrib-devhelp=1.0.6=pyhd8ed1ab_0
- - sphinxcontrib-htmlhelp=2.0.5=pyhd8ed1ab_0
- - sphinxcontrib-jsmath=1.0.1=pyhd8ed1ab_0
- - sphinxcontrib-qthelp=1.0.7=pyhd8ed1ab_0
- - sphinxcontrib-serializinghtml=1.1.10=pyhd8ed1ab_0
- - stack_data=0.2.0=pyhd3eb1b0_0
- - superqt=0.6.4=pyh9208f05_0
- - svt-av1=2.1.0=h7bae524_0
- - sympy=1.12=pypyh9d50eac_103
- - tbb=2021.12.0=h420ef59_1
- - tblib=3.0.0=pyhd8ed1ab_0
- - threadpoolctl=3.5.0=pyhc1e730c_0
- - tifffile=2024.5.22=pyhd8ed1ab_0
- - tinycss2=1.3.0=pyhd8ed1ab_0
- - tk=8.6.13=h5083fa2_1
- - toml=0.10.2=pyhd8ed1ab_0
- - tomli=2.0.1=pyhd8ed1ab_0
- - toolz=0.12.1=pyhd8ed1ab_0
- - torchaudio=2.2.2=py310_cpu
- - torchmetrics=1.4.0.post0=pyhd8ed1ab_0
- - torchvision=0.17.2=py310_cpu
- - tornado=6.4=py310hd125d64_0
- - tqdm=4.66.4=pyhd8ed1ab_0
- - traitlets=5.7.1=py310hca03da5_0
- - typing-extensions=4.11.0=hd8ed1ab_0
- - typing_extensions=4.11.0=pyha770c72_0
- - tzdata=2024a=h0c530f3_0
- - unicodedata2=15.1.0=py310h2aa6e3c_0
- - wcwidth=0.2.13=pyhd8ed1ab_0
- - webencodings=0.5.1=pyhd8ed1ab_2
- - wheel=0.43.0=pyhd8ed1ab_1
- - x264=1!164.3095=h57fd34a_2
- - x265=3.5=hbc6ce65_3
- - xorg-libxau=1.0.11=hb547adb_0
- - xorg-libxdmcp=1.1.3=h27ca646_0
- - xyzservices=2024.4.0=pyhd8ed1ab_0
- - xz=5.2.6=h57fd34a_0
- - yaml=0.2.5=h3422bc3_2
- - zeromq=4.3.4=hc377ac9_0
- - zfp=1.0.1=ha8f4885_0
- - zict=3.0.0=pyhd8ed1ab_0
- - zipp=3.17.0=pyhd8ed1ab_0
- - zlib=1.2.13=hfb2fe0b_6
- - zlib-ng=2.0.7=h1a8c8d9_0
- - zstandard=0.19.0=py310h8e9501a_0
- - zstd=1.5.6=hb46c0d2_0
+ - bzip2
+ - ca-certificates=2024.2.2
+ - libffi=3.4.2
+ - libsqlite=3.45.3
+ - libzlib=1.2.13
+ - ncurses=6.5
+ - openssl=3.3.0
+ - pip=24.0
+ - python=3.10.14
+ - readline=8.2
+ - setuptools
+ - tk=8.6.13
+ - wheel=0.43.0
+ - xz=5.2.6
- pip:
- affine==2.4.0
- aicspylibczi==3.1.2
- - aiobotocore==2.5.4
+ - aiobotocore==2.13.0
- aiohttp==3.9.5
- aioitertools==0.11.0
- aiosignal==1.3.1
- alphabase==1.2.4
- - annotated-types==0.7.0
- - ashlar==1.18.0
+ - asciitree==0.3.3
- async-timeout==4.0.3
- - babel==2.15.0
+ - attrs==23.2.0
- biopython==1.83
- - botocore==1.31.17
+ - botocore==1.34.106
+ - cellpose==3.0.8
+ - certifi==2024.2.2
+ - charset-normalizer==3.3.2
+ - click==8.1.7
- click-plugins==1.1.1
- cligj==0.7.2
- - comm==0.2.2
+ - cloudpickle==3.0.0
+ - colorama==0.4.6
- contextlib2==21.6.0
- - docutils==0.18.1
- - elementpath==4.4.0
+ - contourpy==1.2.1
+ - cycler==0.12.1
+ - dask==2024.5.1
+ - dask-expr==1.1.1
+ - distributed==2024.5.1
- fasteners==0.19
+ - fastremap==1.14.1
+ - filelock==3.14.0
+ - fonttools==4.52.4
- frozenlist==1.4.1
- - fsspec==2023.6.0
+ - fsspec==2024.5.0
- h5py==3.11.0
- hilbertcurve==2.0.5
- - ipywidgets==8.1.3
+ - idna==3.7
+ - imagecodecs==2024.1.1
+ - imageio==2.34.1
+ - imagesize==1.4.1
+ - importlib-metadata==7.1.0
+ - jinja2==3.1.4
- jmespath==1.0.1
- - jupyterlab-widgets==3.0.11
- - lxml==4.9.4
+ - joblib==1.4.2
+ - kiwisolver==1.4.5
+ - lazy-loader==0.4
+ - lightning-utilities==0.11.2
+ - llvmlite==0.42.0
+ - locket==1.0.0
+ - lxml==5.2.2
+ - mahotas==1.4.15
+ - markupsafe==2.1.5
+ - matplotlib==3.9.0
+ - mpmath==1.3.0
+ - msgpack==1.0.8
- multidict==6.0.5
- - ome-types==0.5.1.post1
+ - natsort==8.4.0
+ - networkx==3.3
+ - numba==0.59.1
+ - numcodecs==0.12.1
+ - numpy==1.26.4
- ome-zarr==0.9.0
+ - opencv-python==4.9.0.80
+ - opencv-python-headless==4.9.0.80
+ - packaging==24.0
+ - pandas==2.2.2
+ - partd==1.4.2
+ - pillow==10.3.0
+ - psutil==5.9.8
- py-lmd==1.0.0
- pyahocorasick==2.1.0
- - pydantic==2.7.2
- - pydantic-compat==0.1.2
- - pydantic-core==2.18.3
- - pyjnius==1.6.1
+ - pyarrow==16.1.0
+ - pyparsing==3.1.2
- pyteomics==4.7.2
+ - python-dateutil==2.9.0.post0
+ - pytorch-lightning==2.2.5
+ - pytz==2024.1
+ - pyyaml==6.0.1
- rasterio==1.3.10
- regex==2024.5.15
- - renku-sphinx-theme==0.4.0
- - resource-backed-dask-array==0.1.0
- - s3fs==2023.6.0
+ - requests==2.32.3
+ - roifile==2024.5.24
+ - s3fs==2024.5.0
- scikit-fmm==2024.5.29
- - seaborn==0.13.2
+ - scikit-image==0.23.2
+ - scikit-learn==1.5.0
+ - scipy==1.13.1
- shapely==2.0.4
+ - six==1.16.0
- snuggs==1.4.7
- - sphinx-argparse==0.4.0
- - sphinx-rtd-theme==1.3.0
- - sphinxcontrib-jquery==4.1
+ - sortedcontainers==2.4.0
+ - sparcscore==1.0.0
- svgelements==1.9.6
+ - sympy==1.12.1
- tabulate==0.9.0
- - urllib3==1.26.18
- - widgetsnbextension==4.0.11
+ - tblib==3.0.0
+ - threadpoolctl==3.5.0
+ - tifffile==2024.5.22
+ - toolz==0.12.1
+ - torch==2.3.0
+ - torchmetrics==1.4.0.post0
+ - torchvision==0.18.0
+ - tornado==6.4
+ - tqdm==4.66.4
+ - typing-extensions==4.12.0
+ - tzdata==2024.1
+ - urllib3==2.2.1
- wrapt==1.16.0
- - xarray==2024.5.0
- - xmlschema==3.3.1
- - xsdata==24.3.1
- xxhash==3.4.1
- yarl==1.9.4
- - yattag==1.15.2
- - zarr==2.15.0
+ - zarr==2.18.2
+ - zict==3.0.0
+ - zipp==3.19.0
\ No newline at end of file