You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
For the selection process calibration crosses need to be defined that can be used for shape alignment between imaging coordinate system and slide coordinate system on the LMD microscope.
It would be desirable to have a simple workflow how this list of points can be stored in the spatialdata object for access during the selection process.
Requirements:
there should be a possibility to define the points interactively in the Napari-viewer but also to upload them from a csv file and/or list
we should be able to store multiple calibration point sets
during selection we should still be able to overwrite the automatic use of points with custom points if desired
The text was updated successfully, but these errors were encountered:
it is now possible to save layers using the interactive Napari viewer by executing SHIFT + E (see #189). This can be used to define new calibration crosses that should be saved to the sdata object.
For the selection process calibration crosses need to be defined that can be used for shape alignment between imaging coordinate system and slide coordinate system on the LMD microscope.
It would be desirable to have a simple workflow how this list of points can be stored in the spatialdata object for access during the selection process.
Requirements:
The text was updated successfully, but these errors were encountered: