From f7a161863e66aebc8cf45066f0da532c2fb7904e Mon Sep 17 00:00:00 2001
From: MaxVWDV <53457451+MaxVWDV@users.noreply.github.com>
Date: Sun, 21 Mar 2021 07:22:51 +0000
Subject: [PATCH] Add files via upload

---
 GIV_GUI_initialize.m | 2510 +++++++++++++++++++++---------------------
 1 file changed, 1255 insertions(+), 1255 deletions(-)

diff --git a/GIV_GUI_initialize.m b/GIV_GUI_initialize.m
index cb71056..356298e 100644
--- a/GIV_GUI_initialize.m
+++ b/GIV_GUI_initialize.m
@@ -1,1255 +1,1255 @@
-function GIV_GUI_initialize()
-%
-%
-%This function starts off the main image velocity calculation code. It will
-%open a graphical user interface where the different input values can be
-%entered, and then run the functions to calcuate velocities for each image
-%pair inputted. 
-%
-%
-%Note this can take a long time (hours) for very large datasets, it is
-%sometimes worth testing it with smaller datasets to begin with (and/or
-%using low temporal oversampling values).
-%
-%Most of this very long file is simply setting the location of the boxes,
-%etc. Portions were generated automatically using MATLAB's app builder. You
-%can tweak it to improve layout if you like, but I would not recommend
-%changing it very much. 
-
-
-
-
-
-%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-                   %% GLACIER IMAGE VELOCIMETRY (GIV) %%
-%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-%Code written by Max Van Wyk de Vries @ University of Minnesota
-%Credit to Ben Popken and Andrew Wickert for portions of the toolbox.
-%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-%Portions of this toolbox are based on a number of codes written by
-%previous authors, including matPIV, IMGRAFT, PIVLAB, M_Map and more.
-%Credit and thanks are due to the authors of these toolboxes, and for
-%sharing their codes online. See the user manual for a full list of third 
-%party codes used here. Accordingly, you are free to share, edit and
-%add to this GIV code. Please give us credit if you do, and share your code 
-%with the same conditions as this.
-
-% Read the associated paper here: 
-% https://doi.org/10.5194/tc-2020-204
-%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-                        %Version 0.7, Autumn 2020%
-%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-                  %Feel free to contact me at vanwy048@umn.edu%
-
-
-
-%% Make sure to add functions to matlab path so that they are accessible
-if ~isdeployed
-addpath(genpath(pwd));
-end
-%Create array to hold all the components in 
-
-GUIinputs = [];
-
-
-%% This portion of the code generated the GUI and input boxes. It is not very interesting.
-
-% Create UIFigure and hide until all components are created
-            GUIFigure = uifigure('Visible', 'off');
-            GUIFigure.Position = [100 100 656 736];
-            GUIFigure.Name = 'GLACIER IMAGE VELOCIMETRY';
-
-            % Create TabGroup
-            TabGroup = uitabgroup(GUIFigure);
-            TabGroup.Position = [1 194 660 543];
-
-            % Create REQUIREDINPUTSTab
-            REQUIREDINPUTSTab = uitab(TabGroup);
-            REQUIREDINPUTSTab.Title = '                                            REQUIRED INPUTS                                            ';
-
-            % Create PathtoimagesfolderEditFieldLabel
-            PathtoimagesfolderEditFieldLabel = uilabel(REQUIREDINPUTSTab);
-            PathtoimagesfolderEditFieldLabel.HorizontalAlignment = 'right';
-            PathtoimagesfolderEditFieldLabel.FontName = 'Cambria';
-            PathtoimagesfolderEditFieldLabel.Position = [209 305 113 22];
-            PathtoimagesfolderEditFieldLabel.Text = 'Path to images folder';
-
-            % Create PathtoimagesfolderEditField
-            PathtoimagesfolderEditField = uieditfield(REQUIREDINPUTSTab, 'text');
-            PathtoimagesfolderEditField.Position = [337 305 100 22];
-            PathtoimagesfolderEditField.Value = 'C:/EXAMPLE/PATH/TO/IMAGES';
-            
-            % Create Image
-            Image = uiimage(REQUIREDINPUTSTab);
-            Image.Position = [146 355 347 154];
-            Image.ImageSource = 'logo.png';
-
-            % Create BASICINPUTSREQUIREDLabel
-            BASICINPUTSREQUIREDLabel = uilabel(REQUIREDINPUTSTab);
-            BASICINPUTSREQUIREDLabel.FontName = 'Cambria';
-            BASICINPUTSREQUIREDLabel.FontSize = 15;
-            BASICINPUTSREQUIREDLabel.FontWeight = 'bold';
-            BASICINPUTSREQUIREDLabel.Position = [236 344 191 22];
-            BASICINPUTSREQUIREDLabel.Text = 'BASIC INPUTS (REQUIRED)';
-            
-
-            % Create MinimumLatitudeLabel
-            MinimumLatitudeLabel = uilabel(REQUIREDINPUTSTab);
-            MinimumLatitudeLabel.HorizontalAlignment = 'right';
-            MinimumLatitudeLabel.FontName = 'Cambria';
-            MinimumLatitudeLabel.Position = [213 271 109 22];
-            MinimumLatitudeLabel.Text = 'Minimum Latitude   ';
-
-            % Create MinimumLatitudeEditField
-            MinimumLatitudeEditField = uieditfield(REQUIREDINPUTSTab, 'numeric');
-            MinimumLatitudeEditField.Position = [337 271 100 22];
-            MinimumLatitudeEditField.Value = -50.9640;
-
-            % Create MaximumLatitudeEditFieldLabel
-            MaximumLatitudeEditFieldLabel = uilabel(REQUIREDINPUTSTab);
-            MaximumLatitudeEditFieldLabel.HorizontalAlignment = 'right';
-            MaximumLatitudeEditFieldLabel.FontName = 'Cambria';
-            MaximumLatitudeEditFieldLabel.Position = [212 237 110 22];
-            MaximumLatitudeEditFieldLabel.Text = 'Maximum Latitude   ';
-
-            % Create MaximumLatitudeEditField
-            MaximumLatitudeEditField = uieditfield(REQUIREDINPUTSTab, 'numeric');
-            MaximumLatitudeEditField.Position = [337 237 100 22];
-            MaximumLatitudeEditField.Value = -50.8920;
-
-            % Create MinimumLongitudeEditFieldLabel
-            MinimumLongitudeEditFieldLabel = uilabel(REQUIREDINPUTSTab);
-            MinimumLongitudeEditFieldLabel.HorizontalAlignment = 'right';
-            MinimumLongitudeEditFieldLabel.FontName = 'Cambria';
-            MinimumLongitudeEditFieldLabel.Position = [207 205 115 22];
-            MinimumLongitudeEditFieldLabel.Text = 'Minimum Longitude  ';
-
-            % Create MinimumLongitudeEditField
-            MinimumLongitudeEditField = uieditfield(REQUIREDINPUTSTab, 'numeric');
-            MinimumLongitudeEditField.Position = [337 205 100 22];
-            MinimumLongitudeEditField.Value = -73.7460;
-
-            % Create MaximumLongitudeEditFieldLabel
-            MaximumLongitudeEditFieldLabel = uilabel(REQUIREDINPUTSTab);
-            MaximumLongitudeEditFieldLabel.HorizontalAlignment = 'right';
-            MaximumLongitudeEditFieldLabel.FontName = 'Cambria';
-            MaximumLongitudeEditFieldLabel.Position = [208 170 114 22];
-            MaximumLongitudeEditFieldLabel.Text = 'Maximum Longitude ';
-
-            % Create MaximumLongitudeEditField
-            MaximumLongitudeEditField = uieditfield(REQUIREDINPUTSTab, 'numeric');
-            MaximumLongitudeEditField.Position = [337 170 100 22];
-            MaximumLongitudeEditField.Value = -73.4730;
-            
-            
-            % Create ParralelizeCodeLabel
-            geotiffinputLabel = uilabel(REQUIREDINPUTSTab);
-            geotiffinputLabel.FontName = 'Cambria';
-            geotiffinputLabel.Position = [515 250 110 22];
-            geotiffinputLabel.Text = 'geoTiff input?';
-            
-             % Create geotiffinput
-            geotiffinputSwitch = uiswitch(REQUIREDINPUTSTab, 'slider');
-            geotiffinputSwitch.Items = {'No', 'Yes'};
-            geotiffinputSwitch.FontName = 'Cambria';
-            geotiffinputSwitch.Position = [525 220 110 22];
-            geotiffinputSwitch.Value = 'Yes';
-            
-            
-            % Create TimeoversamplingfactorEditFieldLabel
-            TimeoversamplingfactorEditFieldLabel = uilabel(REQUIREDINPUTSTab);
-            TimeoversamplingfactorEditFieldLabel.HorizontalAlignment = 'right';
-            TimeoversamplingfactorEditFieldLabel.FontName = 'Cambria';
-            TimeoversamplingfactorEditFieldLabel.Position = [185 134 137 22];
-            TimeoversamplingfactorEditFieldLabel.Text = 'Time oversampling factor';
-
-            % Create TimeoversamplingfactorEditField
-            TimeoversamplingfactorEditField = uieditfield(REQUIREDINPUTSTab, 'numeric');
-            TimeoversamplingfactorEditField.Position = [337 134 100 22];
-            TimeoversamplingfactorEditField.Value = 1;
-      
-            % Create ParralelizecodeSwitch
-            ParralelizecodeSwitch = uiswitch(REQUIREDINPUTSTab, 'slider');
-            ParralelizecodeSwitch.Items = {'No', 'Yes'};
-            ParralelizecodeSwitch.FontName = 'Cambria';
-            ParralelizecodeSwitch.Position = [309 15 45 20];
-            ParralelizecodeSwitch.Value = 'Yes';
-            
-          
-            % Create FilenametosaveasEditFieldLabel
-            FilenametosaveasEditFieldLabel = uilabel(REQUIREDINPUTSTab);
-            FilenametosaveasEditFieldLabel.HorizontalAlignment = 'right';
-            FilenametosaveasEditFieldLabel.FontName = 'Cambria';
-            FilenametosaveasEditFieldLabel.Position = [215 99 107 22];
-            FilenametosaveasEditFieldLabel.Text = 'File name to save as';
-
-            % Create FilenametosaveasEditField
-            FilenametosaveasEditField = uieditfield(REQUIREDINPUTSTab, 'text');
-            FilenametosaveasEditField.Position = [337 99 100 22];
-            FilenametosaveasEditField.Value = 'Glacier Velocities 1';
-            
-            
-     
-            % Create ParralelizeCodeLabel
-            ParralelizeCodeLabel = uilabel(REQUIREDINPUTSTab);
-            ParralelizeCodeLabel.Position = [282 48 101 22];
-            ParralelizeCodeLabel.FontName = 'Cambria';
-            ParralelizeCodeLabel.Text = 'Parralelize Code?';
-          
-            % Create SelectButton
-            SelectButton = uibutton(REQUIREDINPUTSTab, 'push');
-            SelectButton.BackgroundColor = [0.8 0.8 0.8];
-            SelectButton.FontName = 'Cambria';
-            SelectButton.FontWeight = 'bold';
-            SelectButton.Position = [517 305 100 23];
-            SelectButton.Text = 'Select';
-            SelectButton.ButtonPushedFcn =  @(btn,event) plotButtonPushed1(btn,GUIinputs);
-          
-            
-            % Create orLabel
-            orLabel = uilabel(REQUIREDINPUTSTab);
-            orLabel.FontName = 'Cambria';
-            orLabel.Position = [468 305 25 22];
-            orLabel.Text = 'or';
-
-            % Create AdvancedInputsTab
-            AdvancedInputsTab = uitab(TabGroup);
-            AdvancedInputsTab.Title = '             Advanced Inputs            ';
-
-            % Create Image_2
-            Image_2 = uiimage(AdvancedInputsTab);
-            Image_2.Position = [146 355 347 154];
-            Image_2.ImageSource = 'logo.png';
-
-            % Create TabGroup2
-            TabGroup2 = uitabgroup(AdvancedInputsTab);
-            TabGroup2.Position = [1 1 659 368];
-
-            % Create TemplatematchingTab
-            TemplatematchingTab = uitab(TabGroup2);
-            TemplatematchingTab.Title = '        Template matching      ';
-
-            % Create Switch
-            Switch = uiswitch(TemplatematchingTab, 'slider');
-            Switch.Items = {'Single Pass', 'Multipass'};
-            Switch.FontName = 'Cambria';
-            Switch.Position = [308 311 45 20];
-            Switch.Value = 'Multipass';
-            
-                          
-
-            % Create SignaltonoiseratioEditFieldLabel
-            SignaltonoiseratioEditFieldLabel = uilabel(TemplatematchingTab);
-            SignaltonoiseratioEditFieldLabel.HorizontalAlignment = 'right';
-            SignaltonoiseratioEditFieldLabel.FontName = 'Cambria';
-            SignaltonoiseratioEditFieldLabel.Position = [208 215 106 22];
-            SignaltonoiseratioEditFieldLabel.Text = 'Signal to noise ratio';
-
-            % Create SignaltonoiseratioEditField
-            SignaltonoiseratioEditField = uieditfield(TemplatematchingTab, 'numeric');
-            SignaltonoiseratioEditField.Position = [329 215 100 22];
-            SignaltonoiseratioEditField.Value = 5;    
-            
-            
-            % Create PeakratioEditFieldLabel
-            PeakratioEditFieldLabel = uilabel(TemplatematchingTab);
-            PeakratioEditFieldLabel.HorizontalAlignment = 'right';
-            PeakratioEditFieldLabel.FontName = 'Cambria';
-            PeakratioEditFieldLabel.Position = [208 170 106 22];
-            PeakratioEditFieldLabel.Text = 'Peak ratio';
-
-            % Create PeakratioEditFieldField
-            PeakratioEditFieldField = uieditfield(TemplatematchingTab, 'numeric');
-            PeakratioEditFieldField.Position = [329 170 100 22];
-            PeakratioEditFieldField.Value = 1.3;
- 
-            
-            
-                        
-
-%             % Create MultipassoptionsLabel
-%             MultipassoptionsLabel = uilabel(TemplatematchingTab);
-%             MultipassoptionsLabel.FontName = 'Cambria';
-%             MultipassoptionsLabel.Position = [447 259 97 22];
-%             MultipassoptionsLabel.Text = 'Multipass options';
-% 
-%             % Create WindowmatchoverlapEditFieldLabel
-%             WindowmatchoverlapEditFieldLabel = uilabel(TemplatematchingTab);
-%             WindowmatchoverlapEditFieldLabel.HorizontalAlignment = 'right';
-%             WindowmatchoverlapEditFieldLabel.FontName = 'Cambria';
-%             WindowmatchoverlapEditFieldLabel.Position = [387 210 124 22];
-%             WindowmatchoverlapEditFieldLabel.Text = 'Window match overlap';
-% 
-%             % Create WindowmatchoverlapEditField
-%             WindowmatchoverlapEditField = uieditfield(TemplatematchingTab, 'numeric');
-%             WindowmatchoverlapEditField.Position = [526 210 100 22];
-%             WindowmatchoverlapEditField.Value = 0.5;
-%         
-%             % Create MatchwindowsizeEditFieldLabel
-%             MatchwindowsizeEditFieldLabel = uilabel(TemplatematchingTab);
-%             MatchwindowsizeEditFieldLabel.HorizontalAlignment = 'right';
-%             MatchwindowsizeEditFieldLabel.FontName = 'Cambria';
-%             MatchwindowsizeEditFieldLabel.Position = [408 170 103 22];
-%             MatchwindowsizeEditFieldLabel.Text = 'Match window size';
-% 
-%             % Create MatchwindowsizeEditField
-%             MatchwindowsizeEditField = uieditfield(TemplatematchingTab, 'numeric');
-%             MatchwindowsizeEditField.FontName = 'Cambria';
-%             MatchwindowsizeEditField.Position = [526 170 100 22];
-%             MatchwindowsizeEditField.Value = 64;
-%             
-%     
-%             
-% 
-%             % Create SinglepassoptionsLabel
-%             SinglepassoptionsLabel = uilabel(TemplatematchingTab);
-%             SinglepassoptionsLabel.FontName = 'Cambria';
-%             SinglepassoptionsLabel.Position = [89 259 103 22];
-%             SinglepassoptionsLabel.Text = 'Single pass options';
-
-            % Create IdealresolutionofoutputdataEditFieldLabel
-            IdealresolutionofoutputdataEditFieldLabel = uilabel(TemplatematchingTab);
-            IdealresolutionofoutputdataEditFieldLabel.HorizontalAlignment = 'right';
-            IdealresolutionofoutputdataEditFieldLabel.FontName = 'Cambria';
-            IdealresolutionofoutputdataEditFieldLabel.Position = [152 259 161 22];
-            IdealresolutionofoutputdataEditFieldLabel.Text = 'Ideal resolution of output data';
-
-            % Create IdealresolutionofoutputdataEditField
-            IdealresolutionofoutputdataEditField = uieditfield(TemplatematchingTab, 'numeric');
-            IdealresolutionofoutputdataEditField.Position = [328 259 100 22];
-            IdealresolutionofoutputdataEditField.Value = 50;
-                        
-        
-%             % Create SearchwindowSizeEditFieldLabel
-%             SearchwindowSizeEditFieldLabel = uilabel(TemplatematchingTab);
-%             SearchwindowSizeEditFieldLabel.HorizontalAlignment = 'right';
-%             SearchwindowSizeEditFieldLabel.FontName = 'Cambria';
-%             SearchwindowSizeEditFieldLabel.Position = [77 170 107 22];
-%             SearchwindowSizeEditFieldLabel.Text = 'Search window Size';
-% 
-%             % Create SearchwindowSizeEditField
-%             SearchwindowSizeEditField = uieditfield(TemplatematchingTab, 'numeric');
-%             SearchwindowSizeEditField.Position = [199 170 100 22];
-%             SearchwindowSizeEditField.Value = 30;
-%            
-%             % Create MinimumsearchareaEditFieldLabel
-%             MinimumsearchareaEditFieldLabel = uilabel(TemplatematchingTab);
-%             MinimumsearchareaEditFieldLabel.HorizontalAlignment = 'right';
-%             MinimumsearchareaEditFieldLabel.FontName = 'Cambria';
-%             MinimumsearchareaEditFieldLabel.Position = [68 132 116 22];
-%             MinimumsearchareaEditFieldLabel.Text = 'Minimum search area';
-% 
-%             % Create MinimumsearchareaEditField
-%             MinimumsearchareaEditField = uieditfield(TemplatematchingTab, 'numeric');
-%             MinimumsearchareaEditField.Position = [199 132 100 22];
-%             MinimumsearchareaEditField.Value = 50;
-            
-        
-            % Create DateoptionsTab
-            DateoptionsTab = uitab(TabGroup2);
-            DateoptionsTab.Title = '      Date options    ';
-
-            % Create MinimumYearEditFieldLabel
-            MinimumYearEditFieldLabel = uilabel(DateoptionsTab);
-            MinimumYearEditFieldLabel.HorizontalAlignment = 'right';
-            MinimumYearEditFieldLabel.FontName = 'Cambria';
-            MinimumYearEditFieldLabel.Position = [245 288 85 22];
-            MinimumYearEditFieldLabel.Text = 'Minimum Year  ';
-
-            % Create MinimumYearEditField
-            MinimumYearEditField = uieditfield(DateoptionsTab, 'numeric');
-            MinimumYearEditField.Position = [345 288 100 22];
-            MinimumYearEditField.Value = 1900;
-
-            % Create MaximumYearEditFieldLabel
-            MaximumYearEditFieldLabel = uilabel(DateoptionsTab);
-            MaximumYearEditFieldLabel.HorizontalAlignment = 'right';
-            MaximumYearEditFieldLabel.FontName = 'Cambria';
-            MaximumYearEditFieldLabel.Position = [243 254 87 22];
-            MaximumYearEditFieldLabel.Text = 'Maximum Year  ';
-
-            % Create MaximumYearEditField
-            MaximumYearEditField = uieditfield(DateoptionsTab, 'numeric');
-            MaximumYearEditField.Position = [345 254 100 22];
-            MaximumYearEditField.Value = 2050;
-            
-        
-            % Create MinimumMonthEditFieldLabel
-            MinimumMonthEditFieldLabel = uilabel(DateoptionsTab);
-            MinimumMonthEditFieldLabel.HorizontalAlignment = 'right';
-            MinimumMonthEditFieldLabel.FontName = 'Cambria';
-            MinimumMonthEditFieldLabel.Position = [239 222 91 22];
-            MinimumMonthEditFieldLabel.Text = 'Minimum Month';
-
-            % Create MinimumMonthEditField
-            MinimumMonthEditField = uieditfield(DateoptionsTab, 'numeric');
-            MinimumMonthEditField.Position = [345 222 100 22];
-            MinimumMonthEditField.Value = 1;
-
-            % Create MaximumMonthEditFieldLabel
-            MaximumMonthEditFieldLabel = uilabel(DateoptionsTab);
-            MaximumMonthEditFieldLabel.HorizontalAlignment = 'right';
-            MaximumMonthEditFieldLabel.FontName = 'Cambria';
-            MaximumMonthEditFieldLabel.Position = [237 187 93 22];
-            MaximumMonthEditFieldLabel.Text = 'Maximum Month';
-
-            % Create MaximumMonthEditField
-            MaximumMonthEditField = uieditfield(DateoptionsTab, 'numeric');
-            MaximumMonthEditField.Position = [345 187 100 22];
-            MaximumMonthEditField.Value = 12;
-            
-     
-
-            % Create MinimumDayEditFieldLabel
-            MinimumDayEditFieldLabel = uilabel(DateoptionsTab);
-            MinimumDayEditFieldLabel.HorizontalAlignment = 'right';
-            MinimumDayEditFieldLabel.FontName = 'Cambria';
-            MinimumDayEditFieldLabel.Position = [253 152 77 22];
-            MinimumDayEditFieldLabel.Text = 'Minimum Day';
-
-            % Create MinimumDayEditField
-            MinimumDayEditField = uieditfield(DateoptionsTab, 'numeric');
-            MinimumDayEditField.Position = [345 152 100 22];
-            MinimumDayEditField.Value = 1;
-
-            % Create MaximumDayEditFieldLabel
-            MaximumDayEditFieldLabel = uilabel(DateoptionsTab);
-            MaximumDayEditFieldLabel.HorizontalAlignment = 'right';
-            MaximumDayEditFieldLabel.FontName = 'Cambria';
-            MaximumDayEditFieldLabel.Position = [251 117 79 22];
-            MaximumDayEditFieldLabel.Text = 'Maximum Day';
-
-            % Create MaximumDayEditField
-            MaximumDayEditField = uieditfield(DateoptionsTab, 'numeric');
-            MaximumDayEditField.Position = [345 117 100 22];
-            MaximumDayEditField.Value = 31;
-            
-
-            % Create MinimumintervalforimagepairsEditFieldLabel
-            MinimumintervalforimagepairsEditFieldLabel = uilabel(DateoptionsTab);
-            MinimumintervalforimagepairsEditFieldLabel.HorizontalAlignment = 'right';
-            MinimumintervalforimagepairsEditFieldLabel.FontName = 'Cambria';
-            MinimumintervalforimagepairsEditFieldLabel.Position = [153 70 177 22];
-            MinimumintervalforimagepairsEditFieldLabel.Text = 'Minimum interval for image pairs';
-
-            % Create MinimumintervalforimagepairsEditField
-            MinimumintervalforimagepairsEditField = uieditfield(DateoptionsTab, 'numeric');
-            MinimumintervalforimagepairsEditField.Position = [345 70 100 22];
-            MinimumintervalforimagepairsEditField.Value = 0.019;
-            
- 
-            % Create MaximumintervalforimagepairsEditFieldLabel
-            MaximumintervalforimagepairsEditFieldLabel = uilabel(DateoptionsTab);
-            MaximumintervalforimagepairsEditFieldLabel.HorizontalAlignment = 'right';
-            MaximumintervalforimagepairsEditFieldLabel.FontName = 'Cambria';
-            MaximumintervalforimagepairsEditFieldLabel.Position = [151 35 179 22];
-            MaximumintervalforimagepairsEditFieldLabel.Text = 'Maximum interval for image pairs';
-
-            % Create MaximumintervalforimagepairsEditField
-            MaximumintervalforimagepairsEditField = uieditfield(DateoptionsTab, 'numeric');
-            MaximumintervalforimagepairsEditField.FontName = 'Cambria';
-            MaximumintervalforimagepairsEditField.Position = [345 35 100 22];
-            MaximumintervalforimagepairsEditField.Value = 0.75;
-            
-
-            % Create ImagefilteringTab
-            ImagefilteringTab = uitab(TabGroup2);
-            ImagefilteringTab.Title = '        Image filtering      ';
-
-            % Create Switch_2
-            Switch_2 = uiswitch(ImagefilteringTab, 'slider');
-            Switch_2.Items = {'OFF', 'ON'};
-            Switch_2.FontName = 'Cambria';
-            Switch_2.Position = [200 293 45 20];
-            Switch_2.Value = 'OFF';
-
-            % Create ContrastLimitedHistogramEqualisationLabel
-            ContrastLimitedHistogramEqualisationLabel = uilabel(ImagefilteringTab);
-            ContrastLimitedHistogramEqualisationLabel.Position = [123 319 220 22];
-            ContrastLimitedHistogramEqualisationLabel.Text = 'Contrast Limited Histogram Equalisation';
-
-            % Create Switch_3
-            Switch_3 = uiswitch(ImagefilteringTab, 'slider');
-            Switch_3.Items = {'OFF', 'ON'};
-            Switch_3.FontName = 'Cambria';
-            Switch_3.Position = [201 240 45 20];
-            Switch_3.Value = 'OFF';
-
-            % Create HighpassFilterLabel
-            HighpassFilterLabel = uilabel(ImagefilteringTab);
-            HighpassFilterLabel.Position = [180 266 85 22];
-            HighpassFilterLabel.Text = 'Highpass Filter';
-            
-
-            % Create Switch_4
-            Switch_4 = uiswitch(ImagefilteringTab, 'slider');
-            Switch_4.Items = {'OFF', 'ON'};
-            Switch_4.FontName = 'Cambria';
-            Switch_4.Position = [202 191 45 20];
-            Switch_4.Value = 'OFF';
-
-            % Create IntensityCapLabel
-            IntensityCapLabel = uilabel(ImagefilteringTab);
-            IntensityCapLabel.Position = [187 215 75 22];
-            IntensityCapLabel.Text = 'Intensity Cap';
- 
-
-            % Create Switch_5
-            Switch_5 = uiswitch(ImagefilteringTab, 'slider');
-            Switch_5.Items = {'OFF', 'ON'};
-            Switch_5.FontName = 'Cambria';
-            Switch_5.Position = [201 130 45 20];
-            Switch_5.Value = 'ON';
-
-            % Create OrientationFilterLabel
-            OrientationFilterLabel = uilabel(ImagefilteringTab);
-            OrientationFilterLabel.Position = [178 154 94 22];
-            OrientationFilterLabel.Text = 'Orientation Filter';
-            
-
-
-            % Create CLAHEsizeEditFieldLabel
-            CLAHEsizeEditFieldLabel = uilabel(ImagefilteringTab);
-            CLAHEsizeEditFieldLabel.HorizontalAlignment = 'right';
-            CLAHEsizeEditFieldLabel.Position = [384 298 70 22];
-            CLAHEsizeEditFieldLabel.Text = 'CLAHE size';
-
-            % Create CLAHEsizeEditField
-            CLAHEsizeEditField = uieditfield(ImagefilteringTab, 'numeric');
-            CLAHEsizeEditField.Position = [469 298 100 22];
-            CLAHEsizeEditField.Value = 10;
-            
-           
-
-
-            % Create HighpasssizeEditFieldLabel
-            HighpasssizeEditFieldLabel = uilabel(ImagefilteringTab);
-            HighpasssizeEditFieldLabel.HorizontalAlignment = 'right';
-            HighpasssizeEditFieldLabel.Position = [375 245 80 22];
-            HighpasssizeEditFieldLabel.Text = 'Highpass size';
-
-            % Create HighpasssizeEditField
-            HighpasssizeEditField = uieditfield(ImagefilteringTab, 'numeric');
-            HighpasssizeEditField.Position = [470 245 100 22];
-            HighpasssizeEditField.Value = 10;
-            
-         
-
-            % Create Switch_10
-            Switch_10 = uiswitch(ImagefilteringTab, 'slider');
-            Switch_10.Items = {'OFF', 'ON'};
-            Switch_10.FontName = 'Cambria';
-            Switch_10.Position = [202 70 45 20];
-            Switch_10.Value = 'OFF';
-
-            % Create Sobel Filter
-            Sobel_Filter = uilabel(ImagefilteringTab);
-            Sobel_Filter.Position = [187 94 75 22];
-            Sobel_Filter.Text = 'Sobel Filter';
-
-
-            % Create Switch_11
-            Switch_11 = uiswitch(ImagefilteringTab, 'slider');
-            Switch_11.Items = {'OFF', 'ON'};
-            Switch_11.FontName = 'Cambria';
-            Switch_11.Position = [201 9 45 20];
-            Switch_11.Value = 'OFF';
-            
-              % Create OrientationFilterLabel_2
-            Laplacian_filter = uilabel(ImagefilteringTab);
-            Laplacian_filter.Position = [178 33 94 22];
-            Laplacian_filter.Text = 'Laplacian filter';
-            
-
-            % Create SavingTab
-            SavingTab = uitab(TabGroup2);
-            SavingTab.Title = '       Saving      ';
-
-            % Create Switch_6
-            Switch_6 = uiswitch(SavingTab, 'slider');
-            Switch_6.Items = {'OFF', 'ON'};
-            Switch_6.FontName = 'Cambria';
-            Switch_6.Position = [298 275 45 20];
-            Switch_6.Value = 'ON';
-
-            % Create SaveMATLABdataarraysLabel
-            SaveMATLABdataarraysLabel = uilabel(SavingTab);
-            SaveMATLABdataarraysLabel.Position = [254 302 153 22];
-            SaveMATLABdataarraysLabel.Text = 'Save MATLAB data arrays?';
-
-
-            % Create Switch_7
-            Switch_7 = uiswitch(SavingTab, 'slider');
-            Switch_7.Items = {'OFF', 'ON'};
-            Switch_7.FontName = 'Cambria';
-            Switch_7.Position = [298 198 45 20];
-            Switch_7.Value = 'ON';
-
-            % Create Switch_8
-            Switch_8 = uiswitch(SavingTab, 'slider');
-            Switch_8.Items = {'OFF', 'ON'};
-            Switch_8.FontName = 'Cambria';
-            Switch_8.Position = [299 19 45 20];
-            Switch_8.Value = 'ON';
-
-            % Create SavegeoreferencedtifimagesLabel
-            SavegeoreferencedtifimagesLabel = uilabel(SavingTab);
-            SavegeoreferencedtifimagesLabel.Position = [233 46 178 22];
-            SavegeoreferencedtifimagesLabel.Text = 'Save georeferenced .tif images?';
-
-            % Create SaveimagesofkeyvelocitiesLabel
-            SaveimagesofkeyvelocitiesLabel = uilabel(SavingTab);
-            SaveimagesofkeyvelocitiesLabel.Position = [237 229 169 22];
-            SaveimagesofkeyvelocitiesLabel.Text = 'Save images of key velocities?';
-            
-
-            % Create FormatofimagestosaveEditFieldLabel
-            FormatofimagestosaveEditFieldLabel = uilabel(SavingTab);
-            FormatofimagestosaveEditFieldLabel.HorizontalAlignment = 'right';
-            FormatofimagestosaveEditFieldLabel.Position = [147 119 141 22];
-            FormatofimagestosaveEditFieldLabel.Text = 'Format of images to save';
-
-            % Create FormatofimagestosaveEditField
-            FormatofimagestosaveEditField = uieditfield(SavingTab, 'text');
-            FormatofimagestosaveEditField.Position = [303 119 100 22];
-            FormatofimagestosaveEditField.Value = 'png';
-
-
-            % Create OtherTab
-            OtherTab = uitab(TabGroup2);
-            OtherTab.Title = '     Other     ';
-
-            % Create MaximumVelocityEditFieldLabel
-            MaximumVelocityEditFieldLabel = uilabel(OtherTab);
-            MaximumVelocityEditFieldLabel.HorizontalAlignment = 'right';
-            MaximumVelocityEditFieldLabel.FontName = 'Cambria';
-            MaximumVelocityEditFieldLabel.Position = [222 300 100 22];
-            MaximumVelocityEditFieldLabel.Text = 'Maximum Velocity';
-
-            % Create MaximumVelocityEditField
-            MaximumVelocityEditField = uieditfield(OtherTab, 'numeric');
-            MaximumVelocityEditField.Position = [337 300 100 22];
-            MaximumVelocityEditField.Value = 2500;
-            
-            % Create Excludedangle1minimumEditFieldLabel
-            Excludedangle1minimumEditFieldLabel = uilabel(OtherTab);
-            Excludedangle1minimumEditFieldLabel.HorizontalAlignment = 'right';
-            Excludedangle1minimumEditFieldLabel.FontName = 'Cambria';
-            Excludedangle1minimumEditFieldLabel.Position = [58 210 144 22];
-            Excludedangle1minimumEditFieldLabel.Text = 'Excluded angle 1 minimum';
-
-            % Create Excludedangle1minimumEditField
-            Excludedangle1minimumEditField = uieditfield(OtherTab, 'numeric');
-            Excludedangle1minimumEditField.Position = [217 210 100 22];
-
-            % Create Excludedangle2minimumEditFieldLabel
-            Excludedangle2minimumEditFieldLabel = uilabel(OtherTab);
-            Excludedangle2minimumEditFieldLabel.HorizontalAlignment = 'right';
-            Excludedangle2minimumEditFieldLabel.FontName = 'Cambria';
-            Excludedangle2minimumEditFieldLabel.Position = [58 174 144 22];
-            Excludedangle2minimumEditFieldLabel.Text = 'Excluded angle 2 minimum';
-
-            % Create Excludedangle2minimumEditField
-            Excludedangle2minimumEditField = uieditfield(OtherTab, 'numeric');
-            Excludedangle2minimumEditField.Position = [217 174 100 22];
-            Excludedangle2minimumEditField.Value = 360;
-            
-                        % Create Excludedangle2maximumEditFieldLabel
-            Excludedangle2maximumEditFieldLabel = uilabel(OtherTab);
-            Excludedangle2maximumEditFieldLabel.HorizontalAlignment = 'right';
-            Excludedangle2maximumEditFieldLabel.FontName = 'Cambria';
-            Excludedangle2maximumEditFieldLabel.Position = [353 174 146 22];
-            Excludedangle2maximumEditFieldLabel.Text = 'Excluded angle 2 maximum';
-
-            % Create Excludedangle2maximumEditField
-            Excludedangle2maximumEditField = uieditfield(OtherTab, 'numeric');
-            Excludedangle2maximumEditField.Position = [514 174 100 22];
-            Excludedangle2maximumEditField.Value = 360;
-
-            % Create Excludedangle1maximumEditFieldLabel
-            Excludedangle1maximumEditFieldLabel = uilabel(OtherTab);
-            Excludedangle1maximumEditFieldLabel.HorizontalAlignment = 'right';
-            Excludedangle1maximumEditFieldLabel.FontName = 'Cambria';
-            Excludedangle1maximumEditFieldLabel.Position = [353 210 146 22];
-            Excludedangle1maximumEditFieldLabel.Text = 'Excluded angle 1 maximum';
-
-            % Create Excludedangle1maximumEditField
-            Excludedangle1maximumEditField = uieditfield(OtherTab, 'numeric');
-            Excludedangle1maximumEditField.Position = [514 210 100 22];
-            
-
-% % %             % Create MinimumangleEditFieldLabel
-% % %             MinimumangleEditFieldLabel = uilabel(OtherTab);
-% % %             MinimumangleEditFieldLabel.HorizontalAlignment = 'right';
-% % %             MinimumangleEditFieldLabel.FontName = 'Cambria';
-% % %             MinimumangleEditFieldLabel.Position = [230 187 85 22];
-% % %             MinimumangleEditFieldLabel.Text = 'Minimum angle';
-% % % 
-% % %             % Create MinimumangleEditField
-% % %             MinimumangleEditField = uieditfield(OtherTab, 'numeric');
-% % %             MinimumangleEditField.Position = [330 187 100 22];
-% % %             MinimumangleEditField.Value = 0;
-% % % 
-% % %             
-% % %             % Create MaximumAngleEditFieldLabel
-% % %             MaximumAngleEditFieldLabel = uilabel(OtherTab);
-% % %             MaximumAngleEditFieldLabel.HorizontalAlignment = 'right';
-% % %             MaximumAngleEditFieldLabel.FontName = 'Cambria';
-% % %             MaximumAngleEditFieldLabel.Position = [227 151 88 22];
-% % %             MaximumAngleEditFieldLabel.Text = 'Maximum Angle';
-% % % 
-% % %             % Create MaximumAngleEditField
-% % %             MaximumAngleEditField = uieditfield(OtherTab, 'numeric');
-% % %             MaximumAngleEditField.Position = [330 151 100 22];
-% % %             MaximumAngleEditField.Value = 360;
-
-            % Create Switch_9
-            Switch_9 = uiswitch(OtherTab, 'slider');
-            Switch_9.Items = {'NO', 'YES'};
-            Switch_9.FontName = 'Cambria';
-            Switch_9.Position = [316 243 45 20];
-            Switch_9.Value = 'NO';
-            
-
-            % Create FilterbasedonflowdirectionLabel
-            FilterbasedonflowdirectionLabel = uilabel(OtherTab);
-            FilterbasedonflowdirectionLabel.Position = [272 270 158 22];
-            FilterbasedonflowdirectionLabel.Text = 'Filter based on flow direction';
-            
-
-            
-            % Create SmoothingofcompositearrayofallvelocitiesDropDownLabel
-            SmoothingofcompositearrayofallvelocitiesDropDownLabel = uilabel(OtherTab);
-            SmoothingofcompositearrayofallvelocitiesDropDownLabel.HorizontalAlignment = 'right';
-            SmoothingofcompositearrayofallvelocitiesDropDownLabel.Position = [103 18 248 22];
-            SmoothingofcompositearrayofallvelocitiesDropDownLabel.Text = 'Smoothing of composite array of all velocities';
-
-            % Create SmoothingofcompositearrayofallvelocitiesDropDown
-            SmoothingofcompositearrayofallvelocitiesDropDown = uidropdown(OtherTab);
-            SmoothingofcompositearrayofallvelocitiesDropDown.Items = {'No Smoothing', 'Smoothing in time', 'Smoothing in time and space'};
-            SmoothingofcompositearrayofallvelocitiesDropDown.Position = [365 18 192 22];
-            SmoothingofcompositearrayofallvelocitiesDropDown.Value = 'Smoothing in time and space';
-            
-                        % Create NumberofiterationsformonthlyvelocitiesEditFieldLabel
-            NumberofiterationsformonthlyvelocitiesEditFieldLabel = uilabel(OtherTab);
-            NumberofiterationsformonthlyvelocitiesEditFieldLabel.HorizontalAlignment = 'right';
-            NumberofiterationsformonthlyvelocitiesEditFieldLabel.Position = [134 59 231 22];
-            NumberofiterationsformonthlyvelocitiesEditFieldLabel.Text = 'Number of iterations for monthly velocities';
-
-            % Create NumberofiterationsformonthlyvelocitiesEditField
-            NumberofiterationsformonthlyvelocitiesEditField = uieditfield(OtherTab, 'numeric');
-            NumberofiterationsformonthlyvelocitiesEditField.Position = [380 59 100 22];
-            NumberofiterationsformonthlyvelocitiesEditField.Value = 0;
-            
-                        % Create Switch_12
-            Switch_12 = uiswitch(OtherTab, 'slider');
-            Switch_12.Items = {'NO', 'YES'};
-            Switch_12.FontName = 'Cambria';
-            Switch_12.Position = [321 102 45 20];
-            Switch_12.Value = 'NO';
-
-            % Create NormalizetovelocityofastableregionLabel
-            NormalizetovelocityofastableregionLabel = uilabel(OtherTab);
-            NormalizetovelocityofastableregionLabel.Position = [245 130 212 22];
-            NormalizetovelocityofastableregionLabel.Text = 'Normalize to velocity of a stable region';
-
-
-            % Create GIVAGLACIERVELOCITYCALCULATIONTOOLBOXBYMAXVANWYKDEVRIESLabel
-            GIVAGLACIERVELOCITYCALCULATIONTOOLBOXBYMAXVANWYKDEVRIESLabel = uilabel(GUIFigure);
-            GIVAGLACIERVELOCITYCALCULATIONTOOLBOXBYMAXVANWYKDEVRIESLabel.FontName = 'Cambria';
-            GIVAGLACIERVELOCITYCALCULATIONTOOLBOXBYMAXVANWYKDEVRIESLabel.FontAngle = 'italic';
-            GIVAGLACIERVELOCITYCALCULATIONTOOLBOXBYMAXVANWYKDEVRIESLabel.Position = [116 26 447 22];
-            GIVAGLACIERVELOCITYCALCULATIONTOOLBOXBYMAXVANWYKDEVRIESLabel.Text = 'GIV: A GLACIER VELOCITY TOOLBOX BY VAN WYK DE VRIES AND WICKERT';
-
-            % Create WWWGIVGLACIERCOMCONTACTMEATVANWY048UMNEDULabel
-            WWWGIVGLACIERCOMCONTACTMEATVANWY048UMNEDULabel = uilabel(GUIFigure);
-            WWWGIVGLACIERCOMCONTACTMEATVANWY048UMNEDULabel.FontName = 'Cambria';
-            WWWGIVGLACIERCOMCONTACTMEATVANWY048UMNEDULabel.FontSize = 10;
-            WWWGIVGLACIERCOMCONTACTMEATVANWY048UMNEDULabel.FontAngle = 'italic';
-            WWWGIVGLACIERCOMCONTACTMEATVANWY048UMNEDULabel.Position = [184 6 295 22];
-            WWWGIVGLACIERCOMCONTACTMEATVANWY048UMNEDULabel.Text = '             CONTACT ME AT VANWY048@UMN.EDU ';
-
-            % Create CALCULATEVELOCITIESButton
-            CALCULATEVELOCITIESButton = uibutton(GUIFigure, 'push');
-            CALCULATEVELOCITIESButton.BackgroundColor = [0.302 0.7451 0.9333];
-            CALCULATEVELOCITIESButton.FontName = 'Cambria';
-            CALCULATEVELOCITIESButton.FontSize = 25;
-            CALCULATEVELOCITIESButton.FontWeight = 'bold';
-            CALCULATEVELOCITIESButton.FontAngle = 'italic';
-            CALCULATEVELOCITIESButton.FontColor = [0 0.149 1];
-            CALCULATEVELOCITIESButton.Position = [186 59 310 71];
-            CALCULATEVELOCITIESButton.Text = 'CALCULATE VELOCITIES';
-            CALCULATEVELOCITIESButton.ButtonPushedFcn = @(btn,event) plotButtonPushed2 (btn);
-
-            % Create LoadsetupButton
-            LoadsetupButton = uibutton(GUIFigure, 'push');
-            LoadsetupButton.FontName = 'Cambria';
-            LoadsetupButton.FontWeight = 'bold';
-            LoadsetupButton.Position = [26 77 100 34];
-            LoadsetupButton.Text = 'Load setup';
-            LoadsetupButton.ButtonPushedFcn =  @(btn,event) plotButtonPushed3(btn);
-            
-            % Create SavesetupButton
-            SavesetupButton = uibutton(GUIFigure, 'push');
-            SavesetupButton.BackgroundColor = [0.9412 0.9412 0.9412];
-            SavesetupButton.FontName = 'Cambria';
-            SavesetupButton.FontWeight = 'bold';
-            SavesetupButton.Position = [536 77 100 34];
-            SavesetupButton.Text = 'Save setup';
-            SavesetupButton.ButtonPushedFcn = @(btn,event) plotButtonPushed4 (btn);
-            
-                        % Create AnalyseImagePairsButton
-            AnalyseImagePairsButton = uibutton(GUIFigure, 'push');
-            AnalyseImagePairsButton.BackgroundColor = [0.302 0.7451 0.9333];
-            AnalyseImagePairsButton.FontName = 'Cambria';
-            AnalyseImagePairsButton.FontSize = 18;
-            AnalyseImagePairsButton.FontWeight = 'bold';
-            AnalyseImagePairsButton.FontAngle = 'italic';
-            AnalyseImagePairsButton.Position = [248 142 185 40];
-            AnalyseImagePairsButton.Text = 'Analyse Image Pairs';
-            AnalyseImagePairsButton.ButtonPushedFcn = @(btn,event) plotButtonPushed5 (btn);
-
-
-
-            % Show the figure after all components are created
-            GUIFigure.Visible = 'on';
-                
-            
-         %% This portion makes the buttons call the relevant functions. 
-         
-         %For ease, functions are all wrapped in a single GIV_GUI_main,
-         %which is called here.
-         
-        
-        % This button press allows you to select the input folder.    
-        function [btn,event,GUIinputs]= plotButtonPushed1(btn,GUIinputs)
-            a = uigetdir('.');  
-            PathtoimagesfolderEditField.Value = a;
-            GUIinputs.folder = a;
-            figure(GUIFigure)
-        end
-        
-        %This button runs GIV
-        function [btn,event]= plotButtonPushed2(btn,GUIinputs)
-            
-            %Display message to user
-            logo = imread('GIV_LOGO_SMALL.png');
-            msgbox({'RUNNING...YOU MAY CLOSE THE INPUTS BOX. IT MAY TAKE A FEW SECONDS TO CLOSE'},...
-            'GIV is running','custom',logo);
-
-            %Combine input into a MATLAB struct array. These are more human
-            %readable than a simple array, and easier to modify in the
-            %future.
-            GUIinputs.folder = PathtoimagesfolderEditField.Value;   
-            GUIinputs.isgeotiff = geotiffinputSwitch.Value;
-            GUIinputs.minlat = MinimumLatitudeEditField.Value;
-            GUIinputs.maxlat = MaximumLatitudeEditField.Value;
-            GUIinputs.minlon = MinimumLongitudeEditField.Value;
-            GUIinputs.maxlon = MaximumLongitudeEditField.Value;
-            GUIinputs.temporaloversampling = TimeoversamplingfactorEditField.Value; 
-            GUIinputs.parralelize = ParralelizecodeSwitch.Value;
-            GUIinputs.name = FilenametosaveasEditField.Value; 
-            
-            if strcmpi(Switch.Value, 'Multipass')    
-                GUIinputs.numpass = 'Multi'; 
-            else
-                GUIinputs.numpass = 'Single';     
-            end
-            
-            GUIinputs.snr = SignaltonoiseratioEditField.Value;
-            GUIinputs.pkr = PeakratioEditFieldField.Value;
-            GUIinputs.windowoverlap = 0.5;
-            GUIinputs.idealresolution = IdealresolutionofoutputdataEditField.Value;
-            GUIinputs.searchwindowsize = 30;
-            GUIinputs.minsearcharea = 50;
-            GUIinputs.minyear = MinimumYearEditField.Value; 
-            GUIinputs.maxyear = MaximumYearEditField.Value;
-            GUIinputs.minmonth = MinimumMonthEditField.Value; 
-            GUIinputs.maxmonth = MaximumMonthEditField.Value;
-            GUIinputs.minday = MinimumDayEditField.Value; 
-            GUIinputs.maxday = MaximumDayEditField.Value;
-            GUIinputs.mininterval = MinimumintervalforimagepairsEditField.Value;
-            GUIinputs.maxinterval = MaximumintervalforimagepairsEditField.Value;
-            
-            if strcmpi(Switch_2.Value, 'ON')
-                GUIinputs.CLAHE = 1;
-            else
-                GUIinputs.CLAHE = 0;
-            end
-            
-            if strcmpi(Switch_3.Value, 'ON')
-                GUIinputs.hipass = 1;
-            else
-                GUIinputs.hipass = 0;
-            end
-            
-            if strcmpi(Switch_4.Value, 'ON')
-                GUIinputs.intenscap = 1;
-            else
-                GUIinputs.intenscap = 0;
-            end
-            
-            if strcmpi(Switch_5.Value, 'ON')
-             GUIinputs.NAOF = 1;
-            else
-                GUIinputs.NAOF = 0;
-            end
-            
-            GUIinputs.CLAHEsize = CLAHEsizeEditField.Value;
-            GUIinputs.hipasssize = HighpasssizeEditField.Value;
-            
-            if strcmpi(Switch_10.Value, 'ON')
-             GUIinputs.sobel = 1;
-            else
-                GUIinputs.sobel = 0;
-            end
-            
-            if strcmpi(Switch_11.Value, 'ON')
-             GUIinputs.laplacian = 1;
-            else
-                GUIinputs.laplacian = 0;
-            end
-            
-            if strcmpi(Switch_6.Value, 'ON')
-                GUIinputs.savearrays = 'Yes'; %'Yes' or 'No'
-            else 
-                GUIinputs.savearrays = 'No';
-            end
-            
-            if strcmpi(Switch_7.Value, 'ON')
-                GUIinputs.savekeyvel = 'Yes'; %'Yes' or 'No'
-            else 
-                GUIinputs.savekeyvel = 'No';
-            end
-            
-            if strcmpi(Switch_8.Value, 'ON')
-                GUIinputs.savegeotiff = 'Yes'; %'Yes' or 'No'
-            else 
-                GUIinputs.savegeotiff = 'No';
-            end
-            
-            GUIinputs.imageformat = FormatofimagestosaveEditField.Value;
-            GUIinputs.maxvel = MaximumVelocityEditField.Value;
-            GUIinputs.excudedangle1.min = Excludedangle1minimumEditField.Value;
-            GUIinputs.excudedangle1.max = Excludedangle1maximumEditField.Value;
-            GUIinputs.excudedangle2.min = Excludedangle2minimumEditField.Value;  
-            GUIinputs.excudedangle2.max = Excludedangle2maximumEditField.Value;
-            
-            if strcmpi(Switch_12.Value, 'YES')
-                GUIinputs.stable = 'Yes'; %'Yes' or 'No'
-            else 
-                GUIinputs.stable = 'No';
-            end
-            
-            if strcmpi(Switch_9.Value, 'YES')
-                GUIinputs.excludeangle = 'Yes'; %'Yes' or 'No'
-            else 
-                GUIinputs.excludeangle = 'No';
-            end
-            
-            if strcmpi(SmoothingofcompositearrayofallvelocitiesDropDown.Value, 'Smoothing in time and space')
-                GUIinputs.finalsmooth = 'Time and Space';
-            elseif strcmpi(SmoothingofcompositearrayofallvelocitiesDropDown.Value, 'Smoothing in time')
-                GUIinputs.finalsmooth = 'Time';
-            else
-                GUIinputs.finalsmooth = 'None';    
-            end
-            
-            GUIinputs.nummonthiter = NumberofiterationsformonthlyvelocitiesEditField.Value; 
-                    
-            %Rename this array
-            inputs = GUIinputs;
-            
-            %Call the main wrapper function
-            GIV_GUI_main(inputs)
-        end
-        
-        %Load a previously saved inputs file.
-        function [btn,event]= plotButtonPushed3(btn)
-            
-            %Prompt user to select file
-            load_file = uigetfile('input files', 'Select an input file you previously saved.')
-            load(load_file,'inputs');
-            
-            %Display message
-            logo = imread('GIV_LOGO_SMALL.png');
-            msgbox({'RUNNING...YOU MAY CLOSE THE INPUTS BOX. IT MAY TAKE A FEW SECONDS TO CLOSE'},...
-           'GIV is running','custom',logo);
-            
-            %Call main wrapper function
-            GIV_GUI_main(inputs)
-        end
-        
-        %Save an input setup
-        function [btn,event]= plotButtonPushed4(btn,GUIinputs)
-  
-            %Combine input into a MATLAB struct array. These are more human
-            %readable than a simple array, and easier to modify in the
-            %future.
-            GUIinputs.folder = PathtoimagesfolderEditField.Value;   
-            GUIinputs.isgeotiff = geotiffinputSwitch.Value;
-            GUIinputs.minlat = MinimumLatitudeEditField.Value;
-            GUIinputs.maxlat = MaximumLatitudeEditField.Value;
-            GUIinputs.minlon = MinimumLongitudeEditField.Value;
-            GUIinputs.maxlon = MaximumLongitudeEditField.Value;
-            GUIinputs.temporaloversampling = TimeoversamplingfactorEditField.Value; 
-            GUIinputs.parralelize = ParralelizecodeSwitch.Value;
-            GUIinputs.name = FilenametosaveasEditField.Value; 
-            
-            if strcmpi(Switch.Value, 'Multipass')    
-                GUIinputs.numpass = 'Multi'; 
-            else
-                GUIinputs.numpass = 'Single';     
-            end
-            
-            GUIinputs.snr = SignaltonoiseratioEditField.Value;
-            GUIinputs.pkr = PeakratioEditFieldField.Value;
-            GUIinputs.windowoverlap = 0.5;
-            GUIinputs.idealresolution = IdealresolutionofoutputdataEditField.Value;
-            GUIinputs.searchwindowsize = 30;
-            GUIinputs.minsearcharea = 50;
-            GUIinputs.minyear = MinimumYearEditField.Value; 
-            GUIinputs.maxyear = MaximumYearEditField.Value;
-            GUIinputs.minmonth = MinimumMonthEditField.Value; 
-            GUIinputs.maxmonth = MaximumMonthEditField.Value;
-            GUIinputs.minday = MinimumDayEditField.Value; 
-            GUIinputs.maxday = MaximumDayEditField.Value;
-            GUIinputs.mininterval = MinimumintervalforimagepairsEditField.Value;
-            GUIinputs.maxinterval = MaximumintervalforimagepairsEditField.Value;
-            
-            if strcmpi(Switch_2.Value, 'ON')
-                GUIinputs.CLAHE = 1;
-            else
-                GUIinputs.CLAHE = 0;
-            end
-            
-            if strcmpi(Switch_3.Value, 'ON')
-                GUIinputs.hipass = 1;
-            else
-                GUIinputs.hipass = 0;
-            end
-            
-            if strcmpi(Switch_4.Value, 'ON')
-                GUIinputs.intenscap = 1;
-            else
-                GUIinputs.intenscap = 0;
-            end
-            
-            if strcmpi(Switch_5.Value, 'ON')
-             GUIinputs.NAOF = 1;
-            else
-                GUIinputs.NAOF = 0;
-            end
-            
-            GUIinputs.CLAHEsize = CLAHEsizeEditField.Value;
-            GUIinputs.hipasssize = HighpasssizeEditField.Value;
-            
-            if strcmpi(Switch_10.Value, 'ON')
-             GUIinputs.sobel = 1;
-            else
-                GUIinputs.sobel = 0;
-            end
-            
-            if strcmpi(Switch_11.Value, 'ON')
-             GUIinputs.laplacian = 1;
-            else
-                GUIinputs.laplacian = 0;
-            end
-            
-            if strcmpi(Switch_6.Value, 'ON')
-                GUIinputs.savearrays = 'Yes'; %'Yes' or 'No'
-            else 
-                GUIinputs.savearrays = 'No';
-            end
-            
-            if strcmpi(Switch_7.Value, 'ON')
-                GUIinputs.savekeyvel = 'Yes'; %'Yes' or 'No'
-            else 
-                GUIinputs.savekeyvel = 'No';
-            end
-            
-            if strcmpi(Switch_8.Value, 'ON')
-                GUIinputs.savegeotiff = 'Yes'; %'Yes' or 'No'
-            else 
-                GUIinputs.savegeotiff = 'No';
-            end
-            
-            GUIinputs.imageformat = FormatofimagestosaveEditField.Value;
-            GUIinputs.maxvel = MaximumVelocityEditField.Value;
-            GUIinputs.excudedangle1.min = Excludedangle1minimumEditField.Value;
-            GUIinputs.excudedangle1.max = Excludedangle1maximumEditField.Value;
-            GUIinputs.excudedangle2.min = Excludedangle2minimumEditField.Value;  
-            GUIinputs.excudedangle2.max = Excludedangle2maximumEditField.Value;
-            
-            if strcmpi(Switch_12.Value, 'YES')
-                GUIinputs.stable = 'Yes'; %'Yes' or 'No'
-            else 
-                GUIinputs.stable = 'No';
-            end
-            
-            if strcmpi(Switch_9.Value, 'YES')
-                GUIinputs.excludeangle = 'Yes'; %'Yes' or 'No'
-            else 
-                GUIinputs.excludeangle = 'No';
-            end
-            
-            if strcmpi(SmoothingofcompositearrayofallvelocitiesDropDown.Value, 'Smoothing in time and space')
-                GUIinputs.finalsmooth = 'Time and Space';
-            elseif strcmpi(SmoothingofcompositearrayofallvelocitiesDropDown.Value, 'Smoothing in time')
-                GUIinputs.finalsmooth = 'Time';
-            else
-                GUIinputs.finalsmooth = 'None';    
-            end
-            
-            GUIinputs.nummonthiter = NumberofiterationsformonthlyvelocitiesEditField.Value; 
-                    
-            %Rename this array
-            inputs = GUIinputs;
-            
-            %Save the file
-            filename2 = strcat(inputs.folder,'/input files');
-            if ~exist(filename2)
-                mkdir(filename2)
-            end
-            uisave('inputs',strcat(filename2,'/','savefile'));
-            
-        end
-    
-         %Calculate number of viable images for a given setup.   
-         function [btn,event]= plotButtonPushed5(btn,GUIinputs)
-            
-            %Display message to user 
-            logo = imread('GIV_LOGO_SMALL.png');
-             msgbox({'CALCULATING NUMBER OF IMAGE PAIRS...YOU MAY CLOSE THE INPUTS BOX. IT MAY TAKE A FEW SECONDS TO CLOSE'},...
-            'GIV is running','custom',logo);
-
-            %Combine input into a MATLAB struct array. These are more human
-            %readable than a simple array, and easier to modify in the
-            %future.
-            GUIinputs.folder = PathtoimagesfolderEditField.Value;   
-            GUIinputs.isgeotiff = geotiffinputSwitch.Value;
-            GUIinputs.minlat = MinimumLatitudeEditField.Value;
-            GUIinputs.maxlat = MaximumLatitudeEditField.Value;
-            GUIinputs.minlon = MinimumLongitudeEditField.Value;
-            GUIinputs.maxlon = MaximumLongitudeEditField.Value;
-            GUIinputs.temporaloversampling = TimeoversamplingfactorEditField.Value; 
-            GUIinputs.parralelize = ParralelizecodeSwitch.Value;
-            GUIinputs.name = FilenametosaveasEditField.Value; 
-            
-            if strcmpi(Switch.Value, 'Multipass')    
-                GUIinputs.numpass = 'Multi'; 
-            else
-                GUIinputs.numpass = 'Single';     
-            end
-            
-            GUIinputs.snr = SignaltonoiseratioEditField.Value;
-            GUIinputs.pkr = PeakratioEditFieldField.Value;
-            GUIinputs.windowoverlap = 0.5;
-            GUIinputs.idealresolution = IdealresolutionofoutputdataEditField.Value;
-            GUIinputs.searchwindowsize = 30;
-            GUIinputs.minsearcharea = 50;
-            GUIinputs.minyear = MinimumYearEditField.Value; 
-            GUIinputs.maxyear = MaximumYearEditField.Value;
-            GUIinputs.minmonth = MinimumMonthEditField.Value; 
-            GUIinputs.maxmonth = MaximumMonthEditField.Value;
-            GUIinputs.minday = MinimumDayEditField.Value; 
-            GUIinputs.maxday = MaximumDayEditField.Value;
-            GUIinputs.mininterval = MinimumintervalforimagepairsEditField.Value;
-            GUIinputs.maxinterval = MaximumintervalforimagepairsEditField.Value;
-            
-            if strcmpi(Switch_2.Value, 'ON')
-                GUIinputs.CLAHE = 1;
-            else
-                GUIinputs.CLAHE = 0;
-            end
-            
-            if strcmpi(Switch_3.Value, 'ON')
-                GUIinputs.hipass = 1;
-            else
-                GUIinputs.hipass = 0;
-            end
-            
-            if strcmpi(Switch_4.Value, 'ON')
-                GUIinputs.intenscap = 1;
-            else
-                GUIinputs.intenscap = 0;
-            end
-            
-            if strcmpi(Switch_5.Value, 'ON')
-             GUIinputs.NAOF = 1;
-            else
-                GUIinputs.NAOF = 0;
-            end
-            
-            GUIinputs.CLAHEsize = CLAHEsizeEditField.Value;
-            GUIinputs.hipasssize = HighpasssizeEditField.Value;
-            
-            if strcmpi(Switch_10.Value, 'ON')
-             GUIinputs.sobel = 1;
-            else
-                GUIinputs.sobel = 0;
-            end
-            
-            if strcmpi(Switch_11.Value, 'ON')
-             GUIinputs.laplacian = 1;
-            else
-                GUIinputs.laplacian = 0;
-            end
-            
-            if strcmpi(Switch_6.Value, 'ON')
-                GUIinputs.savearrays = 'Yes'; %'Yes' or 'No'
-            else 
-                GUIinputs.savearrays = 'No';
-            end
-            
-            if strcmpi(Switch_7.Value, 'ON')
-                GUIinputs.savekeyvel = 'Yes'; %'Yes' or 'No'
-            else 
-                GUIinputs.savekeyvel = 'No';
-            end
-            
-            if strcmpi(Switch_8.Value, 'ON')
-                GUIinputs.savegeotiff = 'Yes'; %'Yes' or 'No'
-            else 
-                GUIinputs.savegeotiff = 'No';
-            end
-            
-            GUIinputs.imageformat = FormatofimagestosaveEditField.Value;
-            GUIinputs.maxvel = MaximumVelocityEditField.Value;
-            GUIinputs.excudedangle1.min = Excludedangle1minimumEditField.Value;
-            GUIinputs.excudedangle1.max = Excludedangle1maximumEditField.Value;
-            GUIinputs.excudedangle2.min = Excludedangle2minimumEditField.Value;  
-            GUIinputs.excudedangle2.max = Excludedangle2maximumEditField.Value;
-            
-            if strcmpi(Switch_12.Value, 'YES')
-                GUIinputs.stable = 'Yes'; %'Yes' or 'No'
-            else 
-                GUIinputs.stable = 'No';
-            end
-            
-            if strcmpi(Switch_9.Value, 'YES')
-                GUIinputs.excludeangle = 'Yes'; %'Yes' or 'No'
-            else 
-                GUIinputs.excludeangle = 'No';
-            end
-            
-            if strcmpi(SmoothingofcompositearrayofallvelocitiesDropDown.Value, 'Smoothing in time and space')
-                GUIinputs.finalsmooth = 'Time and Space';
-            elseif strcmpi(SmoothingofcompositearrayofallvelocitiesDropDown.Value, 'Smoothing in time')
-                GUIinputs.finalsmooth = 'Time';
-            else
-                GUIinputs.finalsmooth = 'None';    
-            end
-            
-            GUIinputs.nummonthiter = NumberofiterationsformonthlyvelocitiesEditField.Value; 
-                    
-            %Rename this array
-            inputs = GUIinputs;
-            
-            %Call the viable image calculation script.
-            GIVruntime(inputs);
-        end   
-    
-
-end
-        
+function GIV_GUI_initialize()
+%
+%
+%This function starts off the main image velocity calculation code. It will
+%open a graphical user interface where the different input values can be
+%entered, and then run the functions to calcuate velocities for each image
+%pair inputted. 
+%
+%
+%Note this can take a long time (hours) for very large datasets, it is
+%sometimes worth testing it with smaller datasets to begin with (and/or
+%using low temporal oversampling values).
+%
+%Most of this very long file is simply setting the location of the boxes,
+%etc. Portions were generated automatically using MATLAB's app builder. You
+%can tweak it to improve layout if you like, but I would not recommend
+%changing it very much. 
+
+
+
+
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+                   %% GLACIER IMAGE VELOCIMETRY (GIV) %%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%Code written by Max Van Wyk de Vries @ University of Minnesota
+%Credit to Ben Popken and Andrew Wickert for portions of the toolbox.
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%Portions of this toolbox are based on a number of codes written by
+%previous authors, including matPIV, IMGRAFT, PIVLAB, M_Map and more.
+%Credit and thanks are due to the authors of these toolboxes, and for
+%sharing their codes online. See the user manual for a full list of third 
+%party codes used here. Accordingly, you are free to share, edit and
+%add to this GIV code. Please give us credit if you do, and share your code 
+%with the same conditions as this.
+
+% Read the associated paper here: 
+% https://doi.org/10.5194/tc-2020-204
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+                        %Version 0.7, Autumn 2020%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+                  %Feel free to contact me at vanwy048@umn.edu%
+
+
+
+%% Make sure to add functions to matlab path so that they are accessible
+if ~isdeployed
+addpath(genpath(pwd));
+end
+%Create array to hold all the components in 
+
+GUIinputs = [];
+
+
+%% This portion of the code generated the GUI and input boxes. It is not very interesting.
+
+% Create UIFigure and hide until all components are created
+            GUIFigure = uifigure('Visible', 'off');
+            GUIFigure.Position = [100 100 656 736];
+            GUIFigure.Name = 'GLACIER IMAGE VELOCIMETRY';
+
+            % Create TabGroup
+            TabGroup = uitabgroup(GUIFigure);
+            TabGroup.Position = [1 194 660 543];
+
+            % Create REQUIREDINPUTSTab
+            REQUIREDINPUTSTab = uitab(TabGroup);
+            REQUIREDINPUTSTab.Title = '                                            REQUIRED INPUTS                                            ';
+
+            % Create PathtoimagesfolderEditFieldLabel
+            PathtoimagesfolderEditFieldLabel = uilabel(REQUIREDINPUTSTab);
+            PathtoimagesfolderEditFieldLabel.HorizontalAlignment = 'right';
+            PathtoimagesfolderEditFieldLabel.FontName = 'Cambria';
+            PathtoimagesfolderEditFieldLabel.Position = [209 305 113 22];
+            PathtoimagesfolderEditFieldLabel.Text = 'Path to images folder';
+
+            % Create PathtoimagesfolderEditField
+            PathtoimagesfolderEditField = uieditfield(REQUIREDINPUTSTab, 'text');
+            PathtoimagesfolderEditField.Position = [337 305 100 22];
+            PathtoimagesfolderEditField.Value = 'C:/EXAMPLE/PATH/TO/IMAGES';
+            
+            % Create Image
+            Image = uiimage(REQUIREDINPUTSTab);
+            Image.Position = [146 355 347 154];
+            Image.ImageSource = 'logo.png';
+
+            % Create BASICINPUTSREQUIREDLabel
+            BASICINPUTSREQUIREDLabel = uilabel(REQUIREDINPUTSTab);
+            BASICINPUTSREQUIREDLabel.FontName = 'Cambria';
+            BASICINPUTSREQUIREDLabel.FontSize = 15;
+            BASICINPUTSREQUIREDLabel.FontWeight = 'bold';
+            BASICINPUTSREQUIREDLabel.Position = [236 344 191 22];
+            BASICINPUTSREQUIREDLabel.Text = 'BASIC INPUTS (REQUIRED)';
+            
+
+            % Create MinimumLatitudeLabel
+            MinimumLatitudeLabel = uilabel(REQUIREDINPUTSTab);
+            MinimumLatitudeLabel.HorizontalAlignment = 'right';
+            MinimumLatitudeLabel.FontName = 'Cambria';
+            MinimumLatitudeLabel.Position = [213 271 109 22];
+            MinimumLatitudeLabel.Text = 'Minimum Latitude   ';
+
+            % Create MinimumLatitudeEditField
+            MinimumLatitudeEditField = uieditfield(REQUIREDINPUTSTab, 'numeric');
+            MinimumLatitudeEditField.Position = [337 271 100 22];
+            MinimumLatitudeEditField.Value = -50.9640;
+
+            % Create MaximumLatitudeEditFieldLabel
+            MaximumLatitudeEditFieldLabel = uilabel(REQUIREDINPUTSTab);
+            MaximumLatitudeEditFieldLabel.HorizontalAlignment = 'right';
+            MaximumLatitudeEditFieldLabel.FontName = 'Cambria';
+            MaximumLatitudeEditFieldLabel.Position = [212 237 110 22];
+            MaximumLatitudeEditFieldLabel.Text = 'Maximum Latitude   ';
+
+            % Create MaximumLatitudeEditField
+            MaximumLatitudeEditField = uieditfield(REQUIREDINPUTSTab, 'numeric');
+            MaximumLatitudeEditField.Position = [337 237 100 22];
+            MaximumLatitudeEditField.Value = -50.8920;
+
+            % Create MinimumLongitudeEditFieldLabel
+            MinimumLongitudeEditFieldLabel = uilabel(REQUIREDINPUTSTab);
+            MinimumLongitudeEditFieldLabel.HorizontalAlignment = 'right';
+            MinimumLongitudeEditFieldLabel.FontName = 'Cambria';
+            MinimumLongitudeEditFieldLabel.Position = [207 205 115 22];
+            MinimumLongitudeEditFieldLabel.Text = 'Minimum Longitude  ';
+
+            % Create MinimumLongitudeEditField
+            MinimumLongitudeEditField = uieditfield(REQUIREDINPUTSTab, 'numeric');
+            MinimumLongitudeEditField.Position = [337 205 100 22];
+            MinimumLongitudeEditField.Value = -73.7460;
+
+            % Create MaximumLongitudeEditFieldLabel
+            MaximumLongitudeEditFieldLabel = uilabel(REQUIREDINPUTSTab);
+            MaximumLongitudeEditFieldLabel.HorizontalAlignment = 'right';
+            MaximumLongitudeEditFieldLabel.FontName = 'Cambria';
+            MaximumLongitudeEditFieldLabel.Position = [208 170 114 22];
+            MaximumLongitudeEditFieldLabel.Text = 'Maximum Longitude ';
+
+            % Create MaximumLongitudeEditField
+            MaximumLongitudeEditField = uieditfield(REQUIREDINPUTSTab, 'numeric');
+            MaximumLongitudeEditField.Position = [337 170 100 22];
+            MaximumLongitudeEditField.Value = -73.4730;
+            
+            
+            % Create ParralelizeCodeLabel
+            geotiffinputLabel = uilabel(REQUIREDINPUTSTab);
+            geotiffinputLabel.FontName = 'Cambria';
+            geotiffinputLabel.Position = [515 250 110 22];
+            geotiffinputLabel.Text = 'geoTiff input?';
+            
+             % Create geotiffinput
+            geotiffinputSwitch = uiswitch(REQUIREDINPUTSTab, 'slider');
+            geotiffinputSwitch.Items = {'No', 'Yes'};
+            geotiffinputSwitch.FontName = 'Cambria';
+            geotiffinputSwitch.Position = [525 220 110 22];
+            geotiffinputSwitch.Value = 'Yes';
+            
+            
+            % Create TimeoversamplingfactorEditFieldLabel
+            TimeoversamplingfactorEditFieldLabel = uilabel(REQUIREDINPUTSTab);
+            TimeoversamplingfactorEditFieldLabel.HorizontalAlignment = 'right';
+            TimeoversamplingfactorEditFieldLabel.FontName = 'Cambria';
+            TimeoversamplingfactorEditFieldLabel.Position = [185 134 137 22];
+            TimeoversamplingfactorEditFieldLabel.Text = 'Time oversampling factor';
+
+            % Create TimeoversamplingfactorEditField
+            TimeoversamplingfactorEditField = uieditfield(REQUIREDINPUTSTab, 'numeric');
+            TimeoversamplingfactorEditField.Position = [337 134 100 22];
+            TimeoversamplingfactorEditField.Value = 1;
+      
+            % Create ParralelizecodeSwitch
+            ParralelizecodeSwitch = uiswitch(REQUIREDINPUTSTab, 'slider');
+            ParralelizecodeSwitch.Items = {'No', 'Yes'};
+            ParralelizecodeSwitch.FontName = 'Cambria';
+            ParralelizecodeSwitch.Position = [309 15 45 20];
+            ParralelizecodeSwitch.Value = 'Yes';
+            
+          
+            % Create FilenametosaveasEditFieldLabel
+            FilenametosaveasEditFieldLabel = uilabel(REQUIREDINPUTSTab);
+            FilenametosaveasEditFieldLabel.HorizontalAlignment = 'right';
+            FilenametosaveasEditFieldLabel.FontName = 'Cambria';
+            FilenametosaveasEditFieldLabel.Position = [215 99 107 22];
+            FilenametosaveasEditFieldLabel.Text = 'File name to save as';
+
+            % Create FilenametosaveasEditField
+            FilenametosaveasEditField = uieditfield(REQUIREDINPUTSTab, 'text');
+            FilenametosaveasEditField.Position = [337 99 100 22];
+            FilenametosaveasEditField.Value = 'Glacier Velocities 1';
+            
+            
+     
+            % Create ParralelizeCodeLabel
+            ParralelizeCodeLabel = uilabel(REQUIREDINPUTSTab);
+            ParralelizeCodeLabel.Position = [282 48 101 22];
+            ParralelizeCodeLabel.FontName = 'Cambria';
+            ParralelizeCodeLabel.Text = 'Parralelize Code?';
+          
+            % Create SelectButton
+            SelectButton = uibutton(REQUIREDINPUTSTab, 'push');
+            SelectButton.BackgroundColor = [0.8 0.8 0.8];
+            SelectButton.FontName = 'Cambria';
+            SelectButton.FontWeight = 'bold';
+            SelectButton.Position = [517 305 100 23];
+            SelectButton.Text = 'Select';
+            SelectButton.ButtonPushedFcn =  @(btn,event) plotButtonPushed1(btn,GUIinputs);
+          
+            
+            % Create orLabel
+            orLabel = uilabel(REQUIREDINPUTSTab);
+            orLabel.FontName = 'Cambria';
+            orLabel.Position = [468 305 25 22];
+            orLabel.Text = 'or';
+
+            % Create AdvancedInputsTab
+            AdvancedInputsTab = uitab(TabGroup);
+            AdvancedInputsTab.Title = '             Advanced Inputs            ';
+
+            % Create Image_2
+            Image_2 = uiimage(AdvancedInputsTab);
+            Image_2.Position = [146 355 347 154];
+            Image_2.ImageSource = 'logo.png';
+
+            % Create TabGroup2
+            TabGroup2 = uitabgroup(AdvancedInputsTab);
+            TabGroup2.Position = [1 1 659 368];
+
+            % Create TemplatematchingTab
+            TemplatematchingTab = uitab(TabGroup2);
+            TemplatematchingTab.Title = '        Template matching      ';
+
+            % Create Switch
+            Switch = uiswitch(TemplatematchingTab, 'slider');
+            Switch.Items = {'Single Pass', 'Multipass'};
+            Switch.FontName = 'Cambria';
+            Switch.Position = [308 311 45 20];
+            Switch.Value = 'Multipass';
+            
+                          
+
+            % Create SignaltonoiseratioEditFieldLabel
+            SignaltonoiseratioEditFieldLabel = uilabel(TemplatematchingTab);
+            SignaltonoiseratioEditFieldLabel.HorizontalAlignment = 'right';
+            SignaltonoiseratioEditFieldLabel.FontName = 'Cambria';
+            SignaltonoiseratioEditFieldLabel.Position = [208 215 106 22];
+            SignaltonoiseratioEditFieldLabel.Text = 'Signal to noise ratio';
+
+            % Create SignaltonoiseratioEditField
+            SignaltonoiseratioEditField = uieditfield(TemplatematchingTab, 'numeric');
+            SignaltonoiseratioEditField.Position = [329 215 100 22];
+            SignaltonoiseratioEditField.Value = 5;    
+            
+            
+            % Create PeakratioEditFieldLabel
+            PeakratioEditFieldLabel = uilabel(TemplatematchingTab);
+            PeakratioEditFieldLabel.HorizontalAlignment = 'right';
+            PeakratioEditFieldLabel.FontName = 'Cambria';
+            PeakratioEditFieldLabel.Position = [208 170 106 22];
+            PeakratioEditFieldLabel.Text = 'Peak ratio';
+
+            % Create PeakratioEditFieldField
+            PeakratioEditFieldField = uieditfield(TemplatematchingTab, 'numeric');
+            PeakratioEditFieldField.Position = [329 170 100 22];
+            PeakratioEditFieldField.Value = 1.3;
+ 
+            
+            
+                        
+
+%             % Create MultipassoptionsLabel
+%             MultipassoptionsLabel = uilabel(TemplatematchingTab);
+%             MultipassoptionsLabel.FontName = 'Cambria';
+%             MultipassoptionsLabel.Position = [447 259 97 22];
+%             MultipassoptionsLabel.Text = 'Multipass options';
+% 
+%             % Create WindowmatchoverlapEditFieldLabel
+%             WindowmatchoverlapEditFieldLabel = uilabel(TemplatematchingTab);
+%             WindowmatchoverlapEditFieldLabel.HorizontalAlignment = 'right';
+%             WindowmatchoverlapEditFieldLabel.FontName = 'Cambria';
+%             WindowmatchoverlapEditFieldLabel.Position = [387 210 124 22];
+%             WindowmatchoverlapEditFieldLabel.Text = 'Window match overlap';
+% 
+%             % Create WindowmatchoverlapEditField
+%             WindowmatchoverlapEditField = uieditfield(TemplatematchingTab, 'numeric');
+%             WindowmatchoverlapEditField.Position = [526 210 100 22];
+%             WindowmatchoverlapEditField.Value = 0.5;
+%         
+%             % Create MatchwindowsizeEditFieldLabel
+%             MatchwindowsizeEditFieldLabel = uilabel(TemplatematchingTab);
+%             MatchwindowsizeEditFieldLabel.HorizontalAlignment = 'right';
+%             MatchwindowsizeEditFieldLabel.FontName = 'Cambria';
+%             MatchwindowsizeEditFieldLabel.Position = [408 170 103 22];
+%             MatchwindowsizeEditFieldLabel.Text = 'Match window size';
+% 
+%             % Create MatchwindowsizeEditField
+%             MatchwindowsizeEditField = uieditfield(TemplatematchingTab, 'numeric');
+%             MatchwindowsizeEditField.FontName = 'Cambria';
+%             MatchwindowsizeEditField.Position = [526 170 100 22];
+%             MatchwindowsizeEditField.Value = 64;
+%             
+%     
+%             
+% 
+%             % Create SinglepassoptionsLabel
+%             SinglepassoptionsLabel = uilabel(TemplatematchingTab);
+%             SinglepassoptionsLabel.FontName = 'Cambria';
+%             SinglepassoptionsLabel.Position = [89 259 103 22];
+%             SinglepassoptionsLabel.Text = 'Single pass options';
+
+            % Create IdealresolutionofoutputdataEditFieldLabel
+            IdealresolutionofoutputdataEditFieldLabel = uilabel(TemplatematchingTab);
+            IdealresolutionofoutputdataEditFieldLabel.HorizontalAlignment = 'right';
+            IdealresolutionofoutputdataEditFieldLabel.FontName = 'Cambria';
+            IdealresolutionofoutputdataEditFieldLabel.Position = [152 259 161 22];
+            IdealresolutionofoutputdataEditFieldLabel.Text = 'Ideal resolution of output data';
+
+            % Create IdealresolutionofoutputdataEditField
+            IdealresolutionofoutputdataEditField = uieditfield(TemplatematchingTab, 'numeric');
+            IdealresolutionofoutputdataEditField.Position = [328 259 100 22];
+            IdealresolutionofoutputdataEditField.Value = 50;
+                        
+        
+%             % Create SearchwindowSizeEditFieldLabel
+%             SearchwindowSizeEditFieldLabel = uilabel(TemplatematchingTab);
+%             SearchwindowSizeEditFieldLabel.HorizontalAlignment = 'right';
+%             SearchwindowSizeEditFieldLabel.FontName = 'Cambria';
+%             SearchwindowSizeEditFieldLabel.Position = [77 170 107 22];
+%             SearchwindowSizeEditFieldLabel.Text = 'Search window Size';
+% 
+%             % Create SearchwindowSizeEditField
+%             SearchwindowSizeEditField = uieditfield(TemplatematchingTab, 'numeric');
+%             SearchwindowSizeEditField.Position = [199 170 100 22];
+%             SearchwindowSizeEditField.Value = 30;
+%            
+%             % Create MinimumsearchareaEditFieldLabel
+%             MinimumsearchareaEditFieldLabel = uilabel(TemplatematchingTab);
+%             MinimumsearchareaEditFieldLabel.HorizontalAlignment = 'right';
+%             MinimumsearchareaEditFieldLabel.FontName = 'Cambria';
+%             MinimumsearchareaEditFieldLabel.Position = [68 132 116 22];
+%             MinimumsearchareaEditFieldLabel.Text = 'Minimum search area';
+% 
+%             % Create MinimumsearchareaEditField
+%             MinimumsearchareaEditField = uieditfield(TemplatematchingTab, 'numeric');
+%             MinimumsearchareaEditField.Position = [199 132 100 22];
+%             MinimumsearchareaEditField.Value = 50;
+            
+        
+            % Create DateoptionsTab
+            DateoptionsTab = uitab(TabGroup2);
+            DateoptionsTab.Title = '      Date options    ';
+
+            % Create MinimumYearEditFieldLabel
+            MinimumYearEditFieldLabel = uilabel(DateoptionsTab);
+            MinimumYearEditFieldLabel.HorizontalAlignment = 'right';
+            MinimumYearEditFieldLabel.FontName = 'Cambria';
+            MinimumYearEditFieldLabel.Position = [245 288 85 22];
+            MinimumYearEditFieldLabel.Text = 'Minimum Year  ';
+
+            % Create MinimumYearEditField
+            MinimumYearEditField = uieditfield(DateoptionsTab, 'numeric');
+            MinimumYearEditField.Position = [345 288 100 22];
+            MinimumYearEditField.Value = 1900;
+
+            % Create MaximumYearEditFieldLabel
+            MaximumYearEditFieldLabel = uilabel(DateoptionsTab);
+            MaximumYearEditFieldLabel.HorizontalAlignment = 'right';
+            MaximumYearEditFieldLabel.FontName = 'Cambria';
+            MaximumYearEditFieldLabel.Position = [243 254 87 22];
+            MaximumYearEditFieldLabel.Text = 'Maximum Year  ';
+
+            % Create MaximumYearEditField
+            MaximumYearEditField = uieditfield(DateoptionsTab, 'numeric');
+            MaximumYearEditField.Position = [345 254 100 22];
+            MaximumYearEditField.Value = 2050;
+            
+        
+            % Create MinimumMonthEditFieldLabel
+            MinimumMonthEditFieldLabel = uilabel(DateoptionsTab);
+            MinimumMonthEditFieldLabel.HorizontalAlignment = 'right';
+            MinimumMonthEditFieldLabel.FontName = 'Cambria';
+            MinimumMonthEditFieldLabel.Position = [239 222 91 22];
+            MinimumMonthEditFieldLabel.Text = 'Minimum Month';
+
+            % Create MinimumMonthEditField
+            MinimumMonthEditField = uieditfield(DateoptionsTab, 'numeric');
+            MinimumMonthEditField.Position = [345 222 100 22];
+            MinimumMonthEditField.Value = 1;
+
+            % Create MaximumMonthEditFieldLabel
+            MaximumMonthEditFieldLabel = uilabel(DateoptionsTab);
+            MaximumMonthEditFieldLabel.HorizontalAlignment = 'right';
+            MaximumMonthEditFieldLabel.FontName = 'Cambria';
+            MaximumMonthEditFieldLabel.Position = [237 187 93 22];
+            MaximumMonthEditFieldLabel.Text = 'Maximum Month';
+
+            % Create MaximumMonthEditField
+            MaximumMonthEditField = uieditfield(DateoptionsTab, 'numeric');
+            MaximumMonthEditField.Position = [345 187 100 22];
+            MaximumMonthEditField.Value = 12;
+            
+     
+
+            % Create MinimumDayEditFieldLabel
+            MinimumDayEditFieldLabel = uilabel(DateoptionsTab);
+            MinimumDayEditFieldLabel.HorizontalAlignment = 'right';
+            MinimumDayEditFieldLabel.FontName = 'Cambria';
+            MinimumDayEditFieldLabel.Position = [253 152 77 22];
+            MinimumDayEditFieldLabel.Text = 'Minimum Day';
+
+            % Create MinimumDayEditField
+            MinimumDayEditField = uieditfield(DateoptionsTab, 'numeric');
+            MinimumDayEditField.Position = [345 152 100 22];
+            MinimumDayEditField.Value = 1;
+
+            % Create MaximumDayEditFieldLabel
+            MaximumDayEditFieldLabel = uilabel(DateoptionsTab);
+            MaximumDayEditFieldLabel.HorizontalAlignment = 'right';
+            MaximumDayEditFieldLabel.FontName = 'Cambria';
+            MaximumDayEditFieldLabel.Position = [251 117 79 22];
+            MaximumDayEditFieldLabel.Text = 'Maximum Day';
+
+            % Create MaximumDayEditField
+            MaximumDayEditField = uieditfield(DateoptionsTab, 'numeric');
+            MaximumDayEditField.Position = [345 117 100 22];
+            MaximumDayEditField.Value = 31;
+            
+
+            % Create MinimumintervalforimagepairsEditFieldLabel
+            MinimumintervalforimagepairsEditFieldLabel = uilabel(DateoptionsTab);
+            MinimumintervalforimagepairsEditFieldLabel.HorizontalAlignment = 'right';
+            MinimumintervalforimagepairsEditFieldLabel.FontName = 'Cambria';
+            MinimumintervalforimagepairsEditFieldLabel.Position = [153 70 177 22];
+            MinimumintervalforimagepairsEditFieldLabel.Text = 'Minimum interval for image pairs';
+
+            % Create MinimumintervalforimagepairsEditField
+            MinimumintervalforimagepairsEditField = uieditfield(DateoptionsTab, 'numeric');
+            MinimumintervalforimagepairsEditField.Position = [345 70 100 22];
+            MinimumintervalforimagepairsEditField.Value = 0.019;
+            
+ 
+            % Create MaximumintervalforimagepairsEditFieldLabel
+            MaximumintervalforimagepairsEditFieldLabel = uilabel(DateoptionsTab);
+            MaximumintervalforimagepairsEditFieldLabel.HorizontalAlignment = 'right';
+            MaximumintervalforimagepairsEditFieldLabel.FontName = 'Cambria';
+            MaximumintervalforimagepairsEditFieldLabel.Position = [151 35 179 22];
+            MaximumintervalforimagepairsEditFieldLabel.Text = 'Maximum interval for image pairs';
+
+            % Create MaximumintervalforimagepairsEditField
+            MaximumintervalforimagepairsEditField = uieditfield(DateoptionsTab, 'numeric');
+            MaximumintervalforimagepairsEditField.FontName = 'Cambria';
+            MaximumintervalforimagepairsEditField.Position = [345 35 100 22];
+            MaximumintervalforimagepairsEditField.Value = 0.75;
+            
+
+            % Create ImagefilteringTab
+            ImagefilteringTab = uitab(TabGroup2);
+            ImagefilteringTab.Title = '        Image filtering      ';
+
+            % Create Switch_2
+            Switch_2 = uiswitch(ImagefilteringTab, 'slider');
+            Switch_2.Items = {'OFF', 'ON'};
+            Switch_2.FontName = 'Cambria';
+            Switch_2.Position = [200 293 45 20];
+            Switch_2.Value = 'OFF';
+
+            % Create ContrastLimitedHistogramEqualisationLabel
+            ContrastLimitedHistogramEqualisationLabel = uilabel(ImagefilteringTab);
+            ContrastLimitedHistogramEqualisationLabel.Position = [123 319 220 22];
+            ContrastLimitedHistogramEqualisationLabel.Text = 'Contrast Limited Histogram Equalisation';
+
+            % Create Switch_3
+            Switch_3 = uiswitch(ImagefilteringTab, 'slider');
+            Switch_3.Items = {'OFF', 'ON'};
+            Switch_3.FontName = 'Cambria';
+            Switch_3.Position = [201 240 45 20];
+            Switch_3.Value = 'OFF';
+
+            % Create HighpassFilterLabel
+            HighpassFilterLabel = uilabel(ImagefilteringTab);
+            HighpassFilterLabel.Position = [180 266 85 22];
+            HighpassFilterLabel.Text = 'Highpass Filter';
+            
+
+            % Create Switch_4
+            Switch_4 = uiswitch(ImagefilteringTab, 'slider');
+            Switch_4.Items = {'OFF', 'ON'};
+            Switch_4.FontName = 'Cambria';
+            Switch_4.Position = [202 191 45 20];
+            Switch_4.Value = 'OFF';
+
+            % Create IntensityCapLabel
+            IntensityCapLabel = uilabel(ImagefilteringTab);
+            IntensityCapLabel.Position = [187 215 75 22];
+            IntensityCapLabel.Text = 'Intensity Cap';
+ 
+
+            % Create Switch_5
+            Switch_5 = uiswitch(ImagefilteringTab, 'slider');
+            Switch_5.Items = {'OFF', 'ON'};
+            Switch_5.FontName = 'Cambria';
+            Switch_5.Position = [201 130 45 20];
+            Switch_5.Value = 'ON';
+
+            % Create OrientationFilterLabel
+            OrientationFilterLabel = uilabel(ImagefilteringTab);
+            OrientationFilterLabel.Position = [178 154 94 22];
+            OrientationFilterLabel.Text = 'Orientation Filter';
+            
+
+
+            % Create CLAHEsizeEditFieldLabel
+            CLAHEsizeEditFieldLabel = uilabel(ImagefilteringTab);
+            CLAHEsizeEditFieldLabel.HorizontalAlignment = 'right';
+            CLAHEsizeEditFieldLabel.Position = [384 298 70 22];
+            CLAHEsizeEditFieldLabel.Text = 'CLAHE size';
+
+            % Create CLAHEsizeEditField
+            CLAHEsizeEditField = uieditfield(ImagefilteringTab, 'numeric');
+            CLAHEsizeEditField.Position = [469 298 100 22];
+            CLAHEsizeEditField.Value = 10;
+            
+           
+
+
+            % Create HighpasssizeEditFieldLabel
+            HighpasssizeEditFieldLabel = uilabel(ImagefilteringTab);
+            HighpasssizeEditFieldLabel.HorizontalAlignment = 'right';
+            HighpasssizeEditFieldLabel.Position = [375 245 80 22];
+            HighpasssizeEditFieldLabel.Text = 'Highpass size';
+
+            % Create HighpasssizeEditField
+            HighpasssizeEditField = uieditfield(ImagefilteringTab, 'numeric');
+            HighpasssizeEditField.Position = [470 245 100 22];
+            HighpasssizeEditField.Value = 10;
+            
+         
+
+            % Create Switch_10
+            Switch_10 = uiswitch(ImagefilteringTab, 'slider');
+            Switch_10.Items = {'OFF', 'ON'};
+            Switch_10.FontName = 'Cambria';
+            Switch_10.Position = [202 70 45 20];
+            Switch_10.Value = 'OFF';
+
+            % Create Sobel Filter
+            Sobel_Filter = uilabel(ImagefilteringTab);
+            Sobel_Filter.Position = [187 94 75 22];
+            Sobel_Filter.Text = 'Sobel Filter';
+
+
+            % Create Switch_11
+            Switch_11 = uiswitch(ImagefilteringTab, 'slider');
+            Switch_11.Items = {'OFF', 'ON'};
+            Switch_11.FontName = 'Cambria';
+            Switch_11.Position = [201 9 45 20];
+            Switch_11.Value = 'OFF';
+            
+              % Create OrientationFilterLabel_2
+            Laplacian_filter = uilabel(ImagefilteringTab);
+            Laplacian_filter.Position = [178 33 94 22];
+            Laplacian_filter.Text = 'Laplacian filter';
+            
+
+            % Create SavingTab
+            SavingTab = uitab(TabGroup2);
+            SavingTab.Title = '       Saving      ';
+
+            % Create Switch_6
+            Switch_6 = uiswitch(SavingTab, 'slider');
+            Switch_6.Items = {'OFF', 'ON'};
+            Switch_6.FontName = 'Cambria';
+            Switch_6.Position = [298 275 45 20];
+            Switch_6.Value = 'ON';
+
+            % Create SaveMATLABdataarraysLabel
+            SaveMATLABdataarraysLabel = uilabel(SavingTab);
+            SaveMATLABdataarraysLabel.Position = [254 302 153 22];
+            SaveMATLABdataarraysLabel.Text = 'Save MATLAB data arrays?';
+
+
+            % Create Switch_7
+            Switch_7 = uiswitch(SavingTab, 'slider');
+            Switch_7.Items = {'OFF', 'ON'};
+            Switch_7.FontName = 'Cambria';
+            Switch_7.Position = [298 198 45 20];
+            Switch_7.Value = 'ON';
+
+            % Create Switch_8
+            Switch_8 = uiswitch(SavingTab, 'slider');
+            Switch_8.Items = {'OFF', 'ON'};
+            Switch_8.FontName = 'Cambria';
+            Switch_8.Position = [299 19 45 20];
+            Switch_8.Value = 'ON';
+
+            % Create SavegeoreferencedtifimagesLabel
+            SavegeoreferencedtifimagesLabel = uilabel(SavingTab);
+            SavegeoreferencedtifimagesLabel.Position = [233 46 178 22];
+            SavegeoreferencedtifimagesLabel.Text = 'Save georeferenced .tif images?';
+
+            % Create SaveimagesofkeyvelocitiesLabel
+            SaveimagesofkeyvelocitiesLabel = uilabel(SavingTab);
+            SaveimagesofkeyvelocitiesLabel.Position = [237 229 169 22];
+            SaveimagesofkeyvelocitiesLabel.Text = 'Save images of key velocities?';
+            
+
+            % Create FormatofimagestosaveEditFieldLabel
+            FormatofimagestosaveEditFieldLabel = uilabel(SavingTab);
+            FormatofimagestosaveEditFieldLabel.HorizontalAlignment = 'right';
+            FormatofimagestosaveEditFieldLabel.Position = [147 119 141 22];
+            FormatofimagestosaveEditFieldLabel.Text = 'Format of images to save';
+
+            % Create FormatofimagestosaveEditField
+            FormatofimagestosaveEditField = uieditfield(SavingTab, 'text');
+            FormatofimagestosaveEditField.Position = [303 119 100 22];
+            FormatofimagestosaveEditField.Value = 'png';
+
+
+            % Create OtherTab
+            OtherTab = uitab(TabGroup2);
+            OtherTab.Title = '     Other     ';
+
+            % Create MaximumVelocityEditFieldLabel
+            MaximumVelocityEditFieldLabel = uilabel(OtherTab);
+            MaximumVelocityEditFieldLabel.HorizontalAlignment = 'right';
+            MaximumVelocityEditFieldLabel.FontName = 'Cambria';
+            MaximumVelocityEditFieldLabel.Position = [222 300 100 22];
+            MaximumVelocityEditFieldLabel.Text = 'Maximum Velocity';
+
+            % Create MaximumVelocityEditField
+            MaximumVelocityEditField = uieditfield(OtherTab, 'numeric');
+            MaximumVelocityEditField.Position = [337 300 100 22];
+            MaximumVelocityEditField.Value = 2500;
+            
+            % Create Excludedangle1minimumEditFieldLabel
+            Excludedangle1minimumEditFieldLabel = uilabel(OtherTab);
+            Excludedangle1minimumEditFieldLabel.HorizontalAlignment = 'right';
+            Excludedangle1minimumEditFieldLabel.FontName = 'Cambria';
+            Excludedangle1minimumEditFieldLabel.Position = [58 210 144 22];
+            Excludedangle1minimumEditFieldLabel.Text = 'Excluded angle 1 minimum';
+
+            % Create Excludedangle1minimumEditField
+            Excludedangle1minimumEditField = uieditfield(OtherTab, 'numeric');
+            Excludedangle1minimumEditField.Position = [217 210 100 22];
+
+            % Create Excludedangle2minimumEditFieldLabel
+            Excludedangle2minimumEditFieldLabel = uilabel(OtherTab);
+            Excludedangle2minimumEditFieldLabel.HorizontalAlignment = 'right';
+            Excludedangle2minimumEditFieldLabel.FontName = 'Cambria';
+            Excludedangle2minimumEditFieldLabel.Position = [58 174 144 22];
+            Excludedangle2minimumEditFieldLabel.Text = 'Excluded angle 2 minimum';
+
+            % Create Excludedangle2minimumEditField
+            Excludedangle2minimumEditField = uieditfield(OtherTab, 'numeric');
+            Excludedangle2minimumEditField.Position = [217 174 100 22];
+            Excludedangle2minimumEditField.Value = 360;
+            
+                        % Create Excludedangle2maximumEditFieldLabel
+            Excludedangle2maximumEditFieldLabel = uilabel(OtherTab);
+            Excludedangle2maximumEditFieldLabel.HorizontalAlignment = 'right';
+            Excludedangle2maximumEditFieldLabel.FontName = 'Cambria';
+            Excludedangle2maximumEditFieldLabel.Position = [353 174 146 22];
+            Excludedangle2maximumEditFieldLabel.Text = 'Excluded angle 2 maximum';
+
+            % Create Excludedangle2maximumEditField
+            Excludedangle2maximumEditField = uieditfield(OtherTab, 'numeric');
+            Excludedangle2maximumEditField.Position = [514 174 100 22];
+            Excludedangle2maximumEditField.Value = 360;
+
+            % Create Excludedangle1maximumEditFieldLabel
+            Excludedangle1maximumEditFieldLabel = uilabel(OtherTab);
+            Excludedangle1maximumEditFieldLabel.HorizontalAlignment = 'right';
+            Excludedangle1maximumEditFieldLabel.FontName = 'Cambria';
+            Excludedangle1maximumEditFieldLabel.Position = [353 210 146 22];
+            Excludedangle1maximumEditFieldLabel.Text = 'Excluded angle 1 maximum';
+
+            % Create Excludedangle1maximumEditField
+            Excludedangle1maximumEditField = uieditfield(OtherTab, 'numeric');
+            Excludedangle1maximumEditField.Position = [514 210 100 22];
+            
+
+% % %             % Create MinimumangleEditFieldLabel
+% % %             MinimumangleEditFieldLabel = uilabel(OtherTab);
+% % %             MinimumangleEditFieldLabel.HorizontalAlignment = 'right';
+% % %             MinimumangleEditFieldLabel.FontName = 'Cambria';
+% % %             MinimumangleEditFieldLabel.Position = [230 187 85 22];
+% % %             MinimumangleEditFieldLabel.Text = 'Minimum angle';
+% % % 
+% % %             % Create MinimumangleEditField
+% % %             MinimumangleEditField = uieditfield(OtherTab, 'numeric');
+% % %             MinimumangleEditField.Position = [330 187 100 22];
+% % %             MinimumangleEditField.Value = 0;
+% % % 
+% % %             
+% % %             % Create MaximumAngleEditFieldLabel
+% % %             MaximumAngleEditFieldLabel = uilabel(OtherTab);
+% % %             MaximumAngleEditFieldLabel.HorizontalAlignment = 'right';
+% % %             MaximumAngleEditFieldLabel.FontName = 'Cambria';
+% % %             MaximumAngleEditFieldLabel.Position = [227 151 88 22];
+% % %             MaximumAngleEditFieldLabel.Text = 'Maximum Angle';
+% % % 
+% % %             % Create MaximumAngleEditField
+% % %             MaximumAngleEditField = uieditfield(OtherTab, 'numeric');
+% % %             MaximumAngleEditField.Position = [330 151 100 22];
+% % %             MaximumAngleEditField.Value = 360;
+
+            % Create Switch_9
+            Switch_9 = uiswitch(OtherTab, 'slider');
+            Switch_9.Items = {'NO', 'YES'};
+            Switch_9.FontName = 'Cambria';
+            Switch_9.Position = [316 243 45 20];
+            Switch_9.Value = 'NO';
+            
+
+            % Create FilterbasedonflowdirectionLabel
+            FilterbasedonflowdirectionLabel = uilabel(OtherTab);
+            FilterbasedonflowdirectionLabel.Position = [272 270 158 22];
+            FilterbasedonflowdirectionLabel.Text = 'Filter based on flow direction';
+            
+
+            
+            % Create SmoothingofcompositearrayofallvelocitiesDropDownLabel
+            SmoothingofcompositearrayofallvelocitiesDropDownLabel = uilabel(OtherTab);
+            SmoothingofcompositearrayofallvelocitiesDropDownLabel.HorizontalAlignment = 'right';
+            SmoothingofcompositearrayofallvelocitiesDropDownLabel.Position = [103 18 248 22];
+            SmoothingofcompositearrayofallvelocitiesDropDownLabel.Text = 'Smoothing of composite array of all velocities';
+
+            % Create SmoothingofcompositearrayofallvelocitiesDropDown
+            SmoothingofcompositearrayofallvelocitiesDropDown = uidropdown(OtherTab);
+            SmoothingofcompositearrayofallvelocitiesDropDown.Items = {'No Smoothing', 'Smoothing in time', 'Smoothing in time and space'};
+            SmoothingofcompositearrayofallvelocitiesDropDown.Position = [365 18 192 22];
+            SmoothingofcompositearrayofallvelocitiesDropDown.Value = 'Smoothing in time and space';
+            
+                        % Create NumberofiterationsformonthlyvelocitiesEditFieldLabel
+            NumberofiterationsformonthlyvelocitiesEditFieldLabel = uilabel(OtherTab);
+            NumberofiterationsformonthlyvelocitiesEditFieldLabel.HorizontalAlignment = 'right';
+            NumberofiterationsformonthlyvelocitiesEditFieldLabel.Position = [134 59 231 22];
+            NumberofiterationsformonthlyvelocitiesEditFieldLabel.Text = 'Number of iterations for monthly velocities';
+
+            % Create NumberofiterationsformonthlyvelocitiesEditField
+            NumberofiterationsformonthlyvelocitiesEditField = uieditfield(OtherTab, 'numeric');
+            NumberofiterationsformonthlyvelocitiesEditField.Position = [380 59 100 22];
+            NumberofiterationsformonthlyvelocitiesEditField.Value = 0;
+            
+                        % Create Switch_12
+            Switch_12 = uiswitch(OtherTab, 'slider');
+            Switch_12.Items = {'NO', 'YES'};
+            Switch_12.FontName = 'Cambria';
+            Switch_12.Position = [321 102 45 20];
+            Switch_12.Value = 'NO';
+
+            % Create NormalizetovelocityofastableregionLabel
+            NormalizetovelocityofastableregionLabel = uilabel(OtherTab);
+            NormalizetovelocityofastableregionLabel.Position = [245 130 212 22];
+            NormalizetovelocityofastableregionLabel.Text = 'Normalize to velocity of a stable region';
+
+
+            % Create GIVAGLACIERVELOCITYCALCULATIONTOOLBOXBYMAXVANWYKDEVRIESLabel
+            GIVAGLACIERVELOCITYCALCULATIONTOOLBOXBYMAXVANWYKDEVRIESLabel = uilabel(GUIFigure);
+            GIVAGLACIERVELOCITYCALCULATIONTOOLBOXBYMAXVANWYKDEVRIESLabel.FontName = 'Cambria';
+            GIVAGLACIERVELOCITYCALCULATIONTOOLBOXBYMAXVANWYKDEVRIESLabel.FontAngle = 'italic';
+            GIVAGLACIERVELOCITYCALCULATIONTOOLBOXBYMAXVANWYKDEVRIESLabel.Position = [116 26 447 22];
+            GIVAGLACIERVELOCITYCALCULATIONTOOLBOXBYMAXVANWYKDEVRIESLabel.Text = 'GIV: A GLACIER VELOCITY TOOLBOX BY VAN WYK DE VRIES AND WICKERT';
+
+            % Create WWWGIVGLACIERCOMCONTACTMEATVANWY048UMNEDULabel
+            WWWGIVGLACIERCOMCONTACTMEATVANWY048UMNEDULabel = uilabel(GUIFigure);
+            WWWGIVGLACIERCOMCONTACTMEATVANWY048UMNEDULabel.FontName = 'Cambria';
+            WWWGIVGLACIERCOMCONTACTMEATVANWY048UMNEDULabel.FontSize = 10;
+            WWWGIVGLACIERCOMCONTACTMEATVANWY048UMNEDULabel.FontAngle = 'italic';
+            WWWGIVGLACIERCOMCONTACTMEATVANWY048UMNEDULabel.Position = [184 6 295 22];
+            WWWGIVGLACIERCOMCONTACTMEATVANWY048UMNEDULabel.Text = '             CONTACT ME AT VANWY048@UMN.EDU ';
+
+            % Create CALCULATEVELOCITIESButton
+            CALCULATEVELOCITIESButton = uibutton(GUIFigure, 'push');
+            CALCULATEVELOCITIESButton.BackgroundColor = [0.302 0.7451 0.9333];
+            CALCULATEVELOCITIESButton.FontName = 'Cambria';
+            CALCULATEVELOCITIESButton.FontSize = 25;
+            CALCULATEVELOCITIESButton.FontWeight = 'bold';
+            CALCULATEVELOCITIESButton.FontAngle = 'italic';
+            CALCULATEVELOCITIESButton.FontColor = [0 0.149 1];
+            CALCULATEVELOCITIESButton.Position = [186 59 310 71];
+            CALCULATEVELOCITIESButton.Text = 'CALCULATE VELOCITIES';
+            CALCULATEVELOCITIESButton.ButtonPushedFcn = @(btn,event) plotButtonPushed2 (btn);
+
+            % Create LoadsetupButton
+            LoadsetupButton = uibutton(GUIFigure, 'push');
+            LoadsetupButton.FontName = 'Cambria';
+            LoadsetupButton.FontWeight = 'bold';
+            LoadsetupButton.Position = [26 77 100 34];
+            LoadsetupButton.Text = 'Load setup';
+            LoadsetupButton.ButtonPushedFcn =  @(btn,event) plotButtonPushed3(btn);
+            
+            % Create SavesetupButton
+            SavesetupButton = uibutton(GUIFigure, 'push');
+            SavesetupButton.BackgroundColor = [0.9412 0.9412 0.9412];
+            SavesetupButton.FontName = 'Cambria';
+            SavesetupButton.FontWeight = 'bold';
+            SavesetupButton.Position = [536 77 100 34];
+            SavesetupButton.Text = 'Save setup';
+            SavesetupButton.ButtonPushedFcn = @(btn,event) plotButtonPushed4 (btn);
+            
+                        % Create AnalyseImagePairsButton
+            AnalyseImagePairsButton = uibutton(GUIFigure, 'push');
+            AnalyseImagePairsButton.BackgroundColor = [0.302 0.7451 0.9333];
+            AnalyseImagePairsButton.FontName = 'Cambria';
+            AnalyseImagePairsButton.FontSize = 18;
+            AnalyseImagePairsButton.FontWeight = 'bold';
+            AnalyseImagePairsButton.FontAngle = 'italic';
+            AnalyseImagePairsButton.Position = [248 142 185 40];
+            AnalyseImagePairsButton.Text = 'Analyse Image Pairs';
+            AnalyseImagePairsButton.ButtonPushedFcn = @(btn,event) plotButtonPushed5 (btn);
+
+
+
+            % Show the figure after all components are created
+            GUIFigure.Visible = 'on';
+                
+            
+         %% This portion makes the buttons call the relevant functions. 
+         
+         %For ease, functions are all wrapped in a single GIV_GUI_main,
+         %which is called here.
+         
+        
+        % This button press allows you to select the input folder.    
+        function [btn,event,GUIinputs]= plotButtonPushed1(btn,GUIinputs)
+            a = uigetdir('.');  
+            PathtoimagesfolderEditField.Value = a;
+            GUIinputs.folder = a;
+            figure(GUIFigure)
+        end
+        
+        %This button runs GIV
+        function [btn,event]= plotButtonPushed2(btn,GUIinputs)
+            
+            %Display message to user
+            logo = imread('GIV_LOGO_SMALL.png');
+            msgbox({'RUNNING...YOU MAY CLOSE THE INPUTS BOX. IT MAY TAKE A FEW SECONDS TO CLOSE'},...
+            'GIV is running','custom',logo);
+
+            %Combine input into a MATLAB struct array. These are more human
+            %readable than a simple array, and easier to modify in the
+            %future.
+            GUIinputs.folder = PathtoimagesfolderEditField.Value;   
+            GUIinputs.isgeotiff = geotiffinputSwitch.Value;
+            GUIinputs.minlat = MinimumLatitudeEditField.Value;
+            GUIinputs.maxlat = MaximumLatitudeEditField.Value;
+            GUIinputs.minlon = MinimumLongitudeEditField.Value;
+            GUIinputs.maxlon = MaximumLongitudeEditField.Value;
+            GUIinputs.temporaloversampling = TimeoversamplingfactorEditField.Value; 
+            GUIinputs.parralelize = ParralelizecodeSwitch.Value;
+            GUIinputs.name = FilenametosaveasEditField.Value; 
+            
+            if strcmpi(Switch.Value, 'Multipass')    
+                GUIinputs.numpass = 'Multi'; 
+            else
+                GUIinputs.numpass = 'Single';     
+            end
+            
+            GUIinputs.snr = SignaltonoiseratioEditField.Value;
+            GUIinputs.pkr = PeakratioEditFieldField.Value;
+            GUIinputs.windowoverlap = 0.5;
+            GUIinputs.idealresolution = IdealresolutionofoutputdataEditField.Value;
+            GUIinputs.searchwindowsize = 30;
+            GUIinputs.minsearcharea = 50;
+            GUIinputs.minyear = MinimumYearEditField.Value; 
+            GUIinputs.maxyear = MaximumYearEditField.Value;
+            GUIinputs.minmonth = MinimumMonthEditField.Value; 
+            GUIinputs.maxmonth = MaximumMonthEditField.Value;
+            GUIinputs.minday = MinimumDayEditField.Value; 
+            GUIinputs.maxday = MaximumDayEditField.Value;
+            GUIinputs.mininterval = MinimumintervalforimagepairsEditField.Value;
+            GUIinputs.maxinterval = MaximumintervalforimagepairsEditField.Value;
+            
+            if strcmpi(Switch_2.Value, 'ON')
+                GUIinputs.CLAHE = 1;
+            else
+                GUIinputs.CLAHE = 0;
+            end
+            
+            if strcmpi(Switch_3.Value, 'ON')
+                GUIinputs.hipass = 1;
+            else
+                GUIinputs.hipass = 0;
+            end
+            
+            if strcmpi(Switch_4.Value, 'ON')
+                GUIinputs.intenscap = 1;
+            else
+                GUIinputs.intenscap = 0;
+            end
+            
+            if strcmpi(Switch_5.Value, 'ON')
+             GUIinputs.NAOF = 1;
+            else
+                GUIinputs.NAOF = 0;
+            end
+            
+            GUIinputs.CLAHEsize = CLAHEsizeEditField.Value;
+            GUIinputs.hipasssize = HighpasssizeEditField.Value;
+            
+            if strcmpi(Switch_10.Value, 'ON')
+             GUIinputs.sobel = 1;
+            else
+                GUIinputs.sobel = 0;
+            end
+            
+            if strcmpi(Switch_11.Value, 'ON')
+             GUIinputs.laplacian = 1;
+            else
+                GUIinputs.laplacian = 0;
+            end
+            
+            if strcmpi(Switch_6.Value, 'ON')
+                GUIinputs.savearrays = 'Yes'; %'Yes' or 'No'
+            else 
+                GUIinputs.savearrays = 'No';
+            end
+            
+            if strcmpi(Switch_7.Value, 'ON')
+                GUIinputs.savekeyvel = 'Yes'; %'Yes' or 'No'
+            else 
+                GUIinputs.savekeyvel = 'No';
+            end
+            
+            if strcmpi(Switch_8.Value, 'ON')
+                GUIinputs.savegeotiff = 'Yes'; %'Yes' or 'No'
+            else 
+                GUIinputs.savegeotiff = 'No';
+            end
+            
+            GUIinputs.imageformat = FormatofimagestosaveEditField.Value;
+            GUIinputs.maxvel = MaximumVelocityEditField.Value;
+            GUIinputs.excudedangle1.min = Excludedangle1minimumEditField.Value;
+            GUIinputs.excudedangle1.max = Excludedangle1maximumEditField.Value;
+            GUIinputs.excudedangle2.min = Excludedangle2minimumEditField.Value;  
+            GUIinputs.excudedangle2.max = Excludedangle2maximumEditField.Value;
+            
+            if strcmpi(Switch_12.Value, 'YES')
+                GUIinputs.stable = 'Yes'; %'Yes' or 'No'
+            else 
+                GUIinputs.stable = 'No';
+            end
+            
+            if strcmpi(Switch_9.Value, 'YES')
+                GUIinputs.excludeangle = 'Yes'; %'Yes' or 'No'
+            else 
+                GUIinputs.excludeangle = 'No';
+            end
+            
+            if strcmpi(SmoothingofcompositearrayofallvelocitiesDropDown.Value, 'Smoothing in time and space')
+                GUIinputs.finalsmooth = 'Time and Space';
+            elseif strcmpi(SmoothingofcompositearrayofallvelocitiesDropDown.Value, 'Smoothing in time')
+                GUIinputs.finalsmooth = 'Time';
+            else
+                GUIinputs.finalsmooth = 'None';    
+            end
+            
+            GUIinputs.nummonthiter = NumberofiterationsformonthlyvelocitiesEditField.Value; 
+                    
+            %Rename this array
+            inputs = GUIinputs;
+            
+            %Call the main wrapper function
+            GIV_GUI_main(inputs)
+        end
+        
+        %Load a previously saved inputs file.
+        function [btn,event]= plotButtonPushed3(btn)
+            
+            %Prompt user to select file
+            [fname,load_file] = uigetfile('input files', 'Select an input file you previously saved.');
+            load(strcat(load_file,'/',fname),'inputs');
+            
+            %Display message
+            logo = imread('GIV_LOGO_SMALL.png');
+            msgbox({'RUNNING...YOU MAY CLOSE THE INPUTS BOX. IT MAY TAKE A FEW SECONDS TO CLOSE'},...
+           'GIV is running','custom',logo);
+            
+            %Call main wrapper function
+            GIV_GUI_main(inputs)
+        end
+        
+        %Save an input setup
+        function [btn,event]= plotButtonPushed4(btn,GUIinputs)
+  
+            %Combine input into a MATLAB struct array. These are more human
+            %readable than a simple array, and easier to modify in the
+            %future.
+            GUIinputs.folder = PathtoimagesfolderEditField.Value;   
+            GUIinputs.isgeotiff = geotiffinputSwitch.Value;
+            GUIinputs.minlat = MinimumLatitudeEditField.Value;
+            GUIinputs.maxlat = MaximumLatitudeEditField.Value;
+            GUIinputs.minlon = MinimumLongitudeEditField.Value;
+            GUIinputs.maxlon = MaximumLongitudeEditField.Value;
+            GUIinputs.temporaloversampling = TimeoversamplingfactorEditField.Value; 
+            GUIinputs.parralelize = ParralelizecodeSwitch.Value;
+            GUIinputs.name = FilenametosaveasEditField.Value; 
+            
+            if strcmpi(Switch.Value, 'Multipass')    
+                GUIinputs.numpass = 'Multi'; 
+            else
+                GUIinputs.numpass = 'Single';     
+            end
+            
+            GUIinputs.snr = SignaltonoiseratioEditField.Value;
+            GUIinputs.pkr = PeakratioEditFieldField.Value;
+            GUIinputs.windowoverlap = 0.5;
+            GUIinputs.idealresolution = IdealresolutionofoutputdataEditField.Value;
+            GUIinputs.searchwindowsize = 30;
+            GUIinputs.minsearcharea = 50;
+            GUIinputs.minyear = MinimumYearEditField.Value; 
+            GUIinputs.maxyear = MaximumYearEditField.Value;
+            GUIinputs.minmonth = MinimumMonthEditField.Value; 
+            GUIinputs.maxmonth = MaximumMonthEditField.Value;
+            GUIinputs.minday = MinimumDayEditField.Value; 
+            GUIinputs.maxday = MaximumDayEditField.Value;
+            GUIinputs.mininterval = MinimumintervalforimagepairsEditField.Value;
+            GUIinputs.maxinterval = MaximumintervalforimagepairsEditField.Value;
+            
+            if strcmpi(Switch_2.Value, 'ON')
+                GUIinputs.CLAHE = 1;
+            else
+                GUIinputs.CLAHE = 0;
+            end
+            
+            if strcmpi(Switch_3.Value, 'ON')
+                GUIinputs.hipass = 1;
+            else
+                GUIinputs.hipass = 0;
+            end
+            
+            if strcmpi(Switch_4.Value, 'ON')
+                GUIinputs.intenscap = 1;
+            else
+                GUIinputs.intenscap = 0;
+            end
+            
+            if strcmpi(Switch_5.Value, 'ON')
+             GUIinputs.NAOF = 1;
+            else
+                GUIinputs.NAOF = 0;
+            end
+            
+            GUIinputs.CLAHEsize = CLAHEsizeEditField.Value;
+            GUIinputs.hipasssize = HighpasssizeEditField.Value;
+            
+            if strcmpi(Switch_10.Value, 'ON')
+             GUIinputs.sobel = 1;
+            else
+                GUIinputs.sobel = 0;
+            end
+            
+            if strcmpi(Switch_11.Value, 'ON')
+             GUIinputs.laplacian = 1;
+            else
+                GUIinputs.laplacian = 0;
+            end
+            
+            if strcmpi(Switch_6.Value, 'ON')
+                GUIinputs.savearrays = 'Yes'; %'Yes' or 'No'
+            else 
+                GUIinputs.savearrays = 'No';
+            end
+            
+            if strcmpi(Switch_7.Value, 'ON')
+                GUIinputs.savekeyvel = 'Yes'; %'Yes' or 'No'
+            else 
+                GUIinputs.savekeyvel = 'No';
+            end
+            
+            if strcmpi(Switch_8.Value, 'ON')
+                GUIinputs.savegeotiff = 'Yes'; %'Yes' or 'No'
+            else 
+                GUIinputs.savegeotiff = 'No';
+            end
+            
+            GUIinputs.imageformat = FormatofimagestosaveEditField.Value;
+            GUIinputs.maxvel = MaximumVelocityEditField.Value;
+            GUIinputs.excudedangle1.min = Excludedangle1minimumEditField.Value;
+            GUIinputs.excudedangle1.max = Excludedangle1maximumEditField.Value;
+            GUIinputs.excudedangle2.min = Excludedangle2minimumEditField.Value;  
+            GUIinputs.excudedangle2.max = Excludedangle2maximumEditField.Value;
+            
+            if strcmpi(Switch_12.Value, 'YES')
+                GUIinputs.stable = 'Yes'; %'Yes' or 'No'
+            else 
+                GUIinputs.stable = 'No';
+            end
+            
+            if strcmpi(Switch_9.Value, 'YES')
+                GUIinputs.excludeangle = 'Yes'; %'Yes' or 'No'
+            else 
+                GUIinputs.excludeangle = 'No';
+            end
+            
+            if strcmpi(SmoothingofcompositearrayofallvelocitiesDropDown.Value, 'Smoothing in time and space')
+                GUIinputs.finalsmooth = 'Time and Space';
+            elseif strcmpi(SmoothingofcompositearrayofallvelocitiesDropDown.Value, 'Smoothing in time')
+                GUIinputs.finalsmooth = 'Time';
+            else
+                GUIinputs.finalsmooth = 'None';    
+            end
+            
+            GUIinputs.nummonthiter = NumberofiterationsformonthlyvelocitiesEditField.Value; 
+                    
+            %Rename this array
+            inputs = GUIinputs;
+            
+            %Save the file
+            filename2 = strcat(inputs.folder,'/input files');
+            if ~exist(filename2)
+                mkdir(filename2)
+            end
+            uisave('inputs',strcat(filename2,'/','savefile'));
+            
+        end
+    
+         %Calculate number of viable images for a given setup.   
+         function [btn,event]= plotButtonPushed5(btn,GUIinputs)
+            
+            %Display message to user 
+            logo = imread('GIV_LOGO_SMALL.png');
+             msgbox({'CALCULATING NUMBER OF IMAGE PAIRS...YOU MAY CLOSE THE INPUTS BOX. IT MAY TAKE A FEW SECONDS TO CLOSE'},...
+            'GIV is running','custom',logo);
+
+            %Combine input into a MATLAB struct array. These are more human
+            %readable than a simple array, and easier to modify in the
+            %future.
+            GUIinputs.folder = PathtoimagesfolderEditField.Value;   
+            GUIinputs.isgeotiff = geotiffinputSwitch.Value;
+            GUIinputs.minlat = MinimumLatitudeEditField.Value;
+            GUIinputs.maxlat = MaximumLatitudeEditField.Value;
+            GUIinputs.minlon = MinimumLongitudeEditField.Value;
+            GUIinputs.maxlon = MaximumLongitudeEditField.Value;
+            GUIinputs.temporaloversampling = TimeoversamplingfactorEditField.Value; 
+            GUIinputs.parralelize = ParralelizecodeSwitch.Value;
+            GUIinputs.name = FilenametosaveasEditField.Value; 
+            
+            if strcmpi(Switch.Value, 'Multipass')    
+                GUIinputs.numpass = 'Multi'; 
+            else
+                GUIinputs.numpass = 'Single';     
+            end
+            
+            GUIinputs.snr = SignaltonoiseratioEditField.Value;
+            GUIinputs.pkr = PeakratioEditFieldField.Value;
+            GUIinputs.windowoverlap = 0.5;
+            GUIinputs.idealresolution = IdealresolutionofoutputdataEditField.Value;
+            GUIinputs.searchwindowsize = 30;
+            GUIinputs.minsearcharea = 50;
+            GUIinputs.minyear = MinimumYearEditField.Value; 
+            GUIinputs.maxyear = MaximumYearEditField.Value;
+            GUIinputs.minmonth = MinimumMonthEditField.Value; 
+            GUIinputs.maxmonth = MaximumMonthEditField.Value;
+            GUIinputs.minday = MinimumDayEditField.Value; 
+            GUIinputs.maxday = MaximumDayEditField.Value;
+            GUIinputs.mininterval = MinimumintervalforimagepairsEditField.Value;
+            GUIinputs.maxinterval = MaximumintervalforimagepairsEditField.Value;
+            
+            if strcmpi(Switch_2.Value, 'ON')
+                GUIinputs.CLAHE = 1;
+            else
+                GUIinputs.CLAHE = 0;
+            end
+            
+            if strcmpi(Switch_3.Value, 'ON')
+                GUIinputs.hipass = 1;
+            else
+                GUIinputs.hipass = 0;
+            end
+            
+            if strcmpi(Switch_4.Value, 'ON')
+                GUIinputs.intenscap = 1;
+            else
+                GUIinputs.intenscap = 0;
+            end
+            
+            if strcmpi(Switch_5.Value, 'ON')
+             GUIinputs.NAOF = 1;
+            else
+                GUIinputs.NAOF = 0;
+            end
+            
+            GUIinputs.CLAHEsize = CLAHEsizeEditField.Value;
+            GUIinputs.hipasssize = HighpasssizeEditField.Value;
+            
+            if strcmpi(Switch_10.Value, 'ON')
+             GUIinputs.sobel = 1;
+            else
+                GUIinputs.sobel = 0;
+            end
+            
+            if strcmpi(Switch_11.Value, 'ON')
+             GUIinputs.laplacian = 1;
+            else
+                GUIinputs.laplacian = 0;
+            end
+            
+            if strcmpi(Switch_6.Value, 'ON')
+                GUIinputs.savearrays = 'Yes'; %'Yes' or 'No'
+            else 
+                GUIinputs.savearrays = 'No';
+            end
+            
+            if strcmpi(Switch_7.Value, 'ON')
+                GUIinputs.savekeyvel = 'Yes'; %'Yes' or 'No'
+            else 
+                GUIinputs.savekeyvel = 'No';
+            end
+            
+            if strcmpi(Switch_8.Value, 'ON')
+                GUIinputs.savegeotiff = 'Yes'; %'Yes' or 'No'
+            else 
+                GUIinputs.savegeotiff = 'No';
+            end
+            
+            GUIinputs.imageformat = FormatofimagestosaveEditField.Value;
+            GUIinputs.maxvel = MaximumVelocityEditField.Value;
+            GUIinputs.excudedangle1.min = Excludedangle1minimumEditField.Value;
+            GUIinputs.excudedangle1.max = Excludedangle1maximumEditField.Value;
+            GUIinputs.excudedangle2.min = Excludedangle2minimumEditField.Value;  
+            GUIinputs.excudedangle2.max = Excludedangle2maximumEditField.Value;
+            
+            if strcmpi(Switch_12.Value, 'YES')
+                GUIinputs.stable = 'Yes'; %'Yes' or 'No'
+            else 
+                GUIinputs.stable = 'No';
+            end
+            
+            if strcmpi(Switch_9.Value, 'YES')
+                GUIinputs.excludeangle = 'Yes'; %'Yes' or 'No'
+            else 
+                GUIinputs.excludeangle = 'No';
+            end
+            
+            if strcmpi(SmoothingofcompositearrayofallvelocitiesDropDown.Value, 'Smoothing in time and space')
+                GUIinputs.finalsmooth = 'Time and Space';
+            elseif strcmpi(SmoothingofcompositearrayofallvelocitiesDropDown.Value, 'Smoothing in time')
+                GUIinputs.finalsmooth = 'Time';
+            else
+                GUIinputs.finalsmooth = 'None';    
+            end
+            
+            GUIinputs.nummonthiter = NumberofiterationsformonthlyvelocitiesEditField.Value; 
+                    
+            %Rename this array
+            inputs = GUIinputs;
+            
+            %Call the viable image calculation script.
+            GIVruntime(inputs);
+        end   
+    
+
+end
+