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lines changed Original file line number Diff line number Diff line change 18
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"/media/starfish/Storage/metacell/Isl1-GFP_E13-5_F129-3_CMN-R-L_02052024-GLC-stitched.ome.tiff"
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)
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OUTPUT_PATH = Path (
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- "/media/starfish/Storage/metacell/converted/Isl1-GFP_E13-5_F129-3_CMN-R-L_02052024-GLC-stitched"
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+ "/media/starfish/Storage/metacell/converted/Isl1-GFP_E13-5_F129-3_CMN-R-L_02052024-GLC-stitched-raw "
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)
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OUTPUT_PATH .mkdir (exist_ok = True , parents = True )
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OVERWRITE = False
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max_mip = 2 ,
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factor = Vec (2 , 2 , 2 ),
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)
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- vols = [CloudVolume ("file://" + str (OUTPUT_PATH ), mip = i ) for i in range (3 )]
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- vols [0 ].provenance .description = "Example data conversion"
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- vols [0 ].commit_info ()
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- vols [0 ].commit_provenance ()
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-
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+ vol = CloudVolume (
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+ "file://" + str (OUTPUT_PATH ),
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+ info = info ,
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+ mip = 0 ,
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+ )
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+ vol .commit_info ()
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+ vol .provenance .description = "Example data conversion"
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+ vol .commit_provenance ()
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+ del vol
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+
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+ vols = [
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+ CloudVolume ("file://" + str (OUTPUT_PATH ), mip = i , compress = False ) for i in range (3 )
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+ ]
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# %% Setup somewhere to hold progress
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progress_dir = OUTPUT_PATH / "progress"
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progress_dir .mkdir (exist_ok = True )
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