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pMyMarsUtil.py
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pMyMarsUtil.py
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#!/bin/env python
"""General utility file of classes and methods for MAGIC data analysis.
Start with : python -i pMyMarsUtil.py
Make an object of QuickMARS or SlowMARS
QuickMARS: For daily anlaysis, flare advcoate.
SlowMARS: For analysis in detail. You should know your data's DC level.
"""
from astropy.time import Time
from numpy import array
import time
import ROOT
from ROOT import std, TParameter
import os
import os.path as path
import shutil
import subprocess
from datetime import datetime
import re
import string
from math import log10
import glob
from pGetLC_bins import GetLC_bins
from pSubmitPJ import *
from Fermi.pLsList import ls_list
from pCommon import *
from pShellCom import *
from pTable import Table
from GetUnfoldedSED import GetUnfoldedSED
from GetOdieResults import GetOdieResults
NBIN_ENERGY_DECADE_STD = 6
class SettingsDC:
"""Class for settings of quate, image cleaning and tuning of MC, depending on DC.
SettingsDC(naDC=<DC in nA>, bReducedHV=False)"""
def __init__(self, naDC=2000., bReducedHV=False):
self.naDC = naDC
self.bReducedHV = bReducedHV
if self.bReducedHV==False:
if self.naDC<=2000:
self.aCleaning = [6.0, 3.5]
elif self.naDC<=3000:
self.aCleaning = [7.0, 4.5]
elif self.naDC<=5000:
self.aCleaning = [8.0, 5.0]
elif self.naDC<=8000:
self.aCleaning = [9.0, 5.5]
else:
print 'The DC is not acceptable for this class.'
else:
if self.naDC<=5000:
self.aCleaning = [10.0, 6.0]
elif self.naDC<=8000:
self.aCleaning = [11.0, 7.0]
elif self.naDC<=12000:
self.aCleaning = [13.0, 8.0]
elif self.naDC<=20000:
self.aCleaning = [14.0, 9.0]
else:
print 'The DC is not acceptable for this class.'
if bReducedHV==True or naDC>2000:
self.bTunedTrain = True
else:
self.bTunedTrain = False
if bReducedHV==True or naDC>2000:
self.bTunedTest = True
else:
self.bTunedTest = False
def getName(self):
strName = "DC{0}".format(int(self.naDC))
if self.bReducedHV==True:
strName = strName + "_ReducedHV"
return strName
def getNaDC(self, nForm='float'):
"""Get the cut value for DC in nA
.getNaDC(nForm='int')
nForm: int, float, str"""
if nForm=='int':
return int(self.naDC)
elif nForm=='float':
return self.naDC
elif nForm=='str':
return str(int(self.naDC))
else:
print "Wrong format."
return -1
def getBoolReducedHV(self):
return self.bReducedHV
def getLVsCleaning(self):
return self.aCleaning
def getLowerLVsCleaning(self):
return self.aCleaning[1]
def getHigherLVsCleaning(self):
return self.aCleaning[0]
def getBoolTunedTrain(self):
return self.bTunedTrain
def getBoolTunedTest(self):
return self.bTunedTest
class QuickMARS:
"""Class for slow analysis. You should know which data file is corresponding to each cut condition.
QuickMARS(nameSrc, strNight, ZenithCut='35to50', TransCut9km='55', CloudCut='No', naCutDC=3000., bReducedHV=False, bTimesOption=True, strTypeMC='', strPeriodMC=''):
Ex) qma = QuickMARS('1ES1959+650', '2016-04-29', ZenithCut='35to50', TransCut9km='No', CloudCut='45', naCutDC='4500', bReducedHV=False, bTimesOption=True)
1) qma = QuickMARS(nameSrc, strTitle, ZenithCut='35to50', TransCut9km='55', CloudCut='No', NumStarCut='No', naCutDC=2000., bReducedHV=False, bTimesOption=True)
2) qma.makeDirs()
== No Moon ==
3) Put your superstar files to the created directories
4) qma.downloadData(password, "S")
5) qma.quate()
6) qma.melibea()
7) qma.odie(bLE=True, bFR=True, bHE=False)
8) qma.flute(eth=300, assumedSpectrum="", redshift="", bMelibeaNonStdMc=False, bNightWise=True, bRunWise=True, bSingleBin=False, bCustom=False, fluxMaxInCrab=1.1)
== Moderate Moon ==
3) Put your superstar files to the created directories
4) qma.downloadData(password, "S")
5) qma.quate()
6) qma.melibea()
7) qma.odie(bLE=True, bFR=True, bHE=False)
8) qma.downloadData(password, "ssignal")
9) qma.ssignal()
10) qma.starMC(bTrain=False, bTest=True)
11) qma.superstarMC(bTrain=False, bTest=True)
12) qma.selectmc(False, True)
13) qma.melibeaMC(False, True)
14) qma.flute(eth=300, assumedSpectrum="", redshift="", bMelibeaNonStdMc=True, bNightWise=True, bRunWise=True, bSingleBin=False, bCustom=False, fluxMaxInCrab=1.1)
== Decent Moon ==
3) Put your calibrated files to the created directories
4) qma.downloadData(password, "ssignal")
5) qma.downloadData(password, "Y", 1, bPjsub=True)
6) qma.ssignal()
7) qma.starMC(bTrain=True, bTest=True)
8) qma.star()
9) qma.starOFF()
10) qma.superstar()
11) qma.superstarMC(bTrain=True, bTest=True)
12) qma.superstarOFF()
13) qma.selectmc(True, True)
14) qma.coach()
15) qma.melibea(True)
15) qma.melibeaMC(False, True)
16) qma.odie(bLE=True, bFR=True, bHE=False)
17) qma.flute(eth=300, assumedSpectrum="", redshift="", bMelibeaNonStdMc=True, bNightWise=True, bRunWise=True, bSingleBin=False, bCustom=False, fluxMaxInCrab=1.1)
"""
def __init__(self, nameSrc, strNight, ZenithCut='35to50', TransCut9km='55', CloudCut='No', NumStarCut='No', naCutDC=3000., bReducedHV=False, bTimesOption=True, strTypeMC='', strPeriodMC='', bForce=True):
SetEnvironForMARS(verRoot = "5.34.24")
self.PATH_MARSSYS = os.environ['MARSSYS']
self.PATH_PYTHON_MODULE_MINE = os.environ['PATH_PYTHON_MODULE_MINE']
#self.PATH_BASE = "/Volumes/SHUNZEI/MAGIC" #"/Volumes/KARYU/MAGIC"
self.PATH_BASE = os.environ['PATH_MARS_BASE']
#self.PATH_DIR_RC = "/Users/Mitsunari/MAGIC/RC"
self.PATH_DIR_RC = os.environ['PATH_MARS_RC_MINE']
self.nameSrc = nameSrc
self.timeThisNight = Time(strNight, format='iso', in_subfmt='date', out_subfmt='date', scale='utc')
if strPeriodMC=='':
self.strVersionMC = '{0}{1}'.format(getPeriodMC(self.timeThisNight), strTypeMC)
else:
self.strVersionMC = '{0}{1}'.format(strPeriodMC, strTypeMC)
# self.versionMC = ''
self.titleAnalysis = self.timeThisNight
self.isoThisNight = self.timeThisNight.value
self.bTimesOption = bTimesOption
self.bForce = bForce
#self.mjdThisNight = int(self.timeThisNight.mjd)
#self.ZenithCut = ZenithCut
self.setZenithCut(ZenithCut)
self.TransCut9km = TransCut9km
self.CloudCut = CloudCut
self.NumStarCut = NumStarCut
self.DcCut = str(int(naCutDC))
self.settingsDC = SettingsDC(naCutDC, bReducedHV)
self.nameCfg = 'ZenithCut{0}_TransCut9km{1}_CloudCut{2}_NumStarCut{3}_{4}'.format(self.getZenithCut(), self.getTransCut9km(), self.getCloudCut(), self.getNumStarCut(), self.settingsDC.getName())
#self.nameCfg = 'ZenithCut{0}_TransCut9km{1}_CloudCut{2}_DcCut{3}'.format(self.getZenithCut(), self.getTransCut9km(), self.getCloudCut(), self.getDcCut())
self.pathDirSpot = '{0}/{1}/{2}'.format(self.getPathBase(), self.getSourceName(), self.getTitleAnalysis())
self.pathDirCondition = '{0}/{1}'.format(self.getPathDirSpot(), self.getConfigName())
self.PATH_DIR_MC = '{0}/standard/{1}'.format(self.getPathBase(), self.getVersionMC())
self.setSubDirs()
def setSubDirs(self):
"""Set paths of sub-directories.
.setSubDirs()
"""
self.pathDirSsignal = '{0}/ssignal'.format(self.getPathDirSpot())
self.pathDirStar = '{0}/star'.format(self.getPathDirSpot())
self.pathDirStarMC = '{0}/starMC'.format(self.getPathDirSpot())
self.pathDirSuperstarOFF = '{0}/superstarOFF'.format(self.getPathDirSpot())
self.pathDirSuperstarCrab = '{0}/superstarCrab'.format(self.getPathDirSpot())
self.pathDirStarOFF = '{0}/starOFF'.format(self.getPathDirSpot())
self.pathDirStarCrab = '{0}/starCrab'.format(self.getPathDirSpot())
self.pathDirCalibrated = '{0}/calibrated'.format(self.getPathDirSpot())
self.pathDirCalibratedOFF = '{0}/standard/OFF/calibrated'.format(self.getPathBase())
self.pathDirQuate = '{0}/quate'.format(self.getPathDirCondition())
# self.pathDirQuateOFF = '{0}/{1}/{2}/{3}/quateOFF'.format(self.getPathDirSpot(), self.getConfigName())
self.pathDirQuateCrab = '{0}/quateCrab'.format(self.getPathDirCondition())
self.pathDirSuperstarMC = '{0}/superstarMC'.format(self.getPathDirSpot())
self.pathDirMelibeaMC = '{0}/melibeaMC/za{1}'.format(self.getPathDirMC(), self.getZenithCut())
self.pathDirMelibeaNonStdMC = '{0}/melibeaMC'.format(self.getPathDirSpot())
self.pathDirSuperstar = '{0}/superstar'.format(self.getPathDirSpot())
if self.getTimesOption()==True:
self.pathDirSuperstarUsed = '{0}/superstar'.format(self.getPathDirSpot())
else:
self.pathDirSuperstarUsed = '{0}/good'.format(self.getPathDirQuate())
self.pathDirMelibea = '{0}/melibea'.format(self.getPathDirCondition())
self.pathDirMelibeaCrab = '{0}/melibeaCrab'.format(self.getPathDirCondition())
self.pathDirOdie = '{0}/odie'.format(self.getPathDirCondition())
self.pathDirOdieCrab = '{0}/odieCrab'.format(self.getPathDirCondition())
self.pathDirCaspar = '{0}/caspar'.format(self.getPathDirCondition())
self.pathDirFlute = '{0}/flute'.format(self.getPathDirCondition())
self.pathDirFluteCrab = '{0}/fluteCrab'.format(self.getPathDirCondition())
self.pathDirCoach = '{0}/coach/za{1}'.format(self.getPathDirMC(), self.getZenithCut())
self.pathDirCoachNonStd = '{0}/coachNonStd'.format(self.getPathDirSpot())
self.pathDirNightlyFlute = '{0}/NightlyFlute'.format(self.getPathDirSpot())
def help(self, strCmd=""):
if strCmd=="makeDirs" or strCmd=="":
print ".makeDirs(bSuperstar=True, bQuate=True, bMelibea=True, bOdie=True, bOdieCrab=True, bCaspar=False, bFlute=True, bStarMC=False, bSuperstarMC=False, bMelibeaMC=False, bMelibeaCrab=False, bFluteCrab=False, bQuateCrab=False, bSsignal=False, bStarOFF=False, bCoachNonStd=False)"
if strCmd=="downloadData" or strCmd=="":
print ".downloadData(password, cDataType='S', verData=1)"
if strCmd=="quate" or strCmd=="":
print ".quate()"
if strCmd=="quateCrab" or strCmd=="":
print ".quateCrab()"
if strCmd=="ssignal" or strCmd=="":
print ".ssignal(self, bTighterCleaning=False)"
if strCmd=="star" or strCmd=="":
print ".star()"
if strCmd=="starMC" or strCmd=="":
print ".starMC(bTrain=False, bTest=True)"
if strCmd=="starOFF" or strCmd=="":
print ".starOFF()"
if strCmd=="starCrab" or strCmd=="":
print ".starCrab()"
if strCmd=="superstarMC" or strCmd=="":
print ".superstarMC(bTrain=False, bTest=True))"
if strCmd=="superstarOFF" or strCmd=="":
print ".superstarOFF()"
if strCmd=="superstarCrab" or strCmd=="":
print ".superstarCrab()"
if strCmd=="coach" or strCmd=="":
print ".coach()"
if strCmd=="melibea" or strCmd=="":
print ".melibea(pathCoachNonStd=self.getPathDirCoach())"
if strCmd=="melibeaMC" or strCmd=="":
print ".melibeaMC(bTrain=False, bTest=True, pathCoachNonStd=self.getPathDirCoach())"
if strCmd=="melibeaCrab" or strCmd=="":
print ".melibeaCrab()"
if strCmd=="odie" or strCmd=="":
print ".odie(bLE=True, bFR=True, bHE=False)"
if strCmd=="odieCrab" or strCmd=="":
print ".odieCrab(bLE=True, bFR=True, bHE=False)"
if strCmd=="flute" or strCmd=="":
print ".flute(eth=300, assumedSpectrum="", redshift="", bNightWise=True, bRunWise=True, bSingleBin=False)"
if strCmd=="fluteCrab" or strCmd=="":
print ".fluteCrab(eth=300, bMelibeaNonStdMc=False)"
def setTitleAnalysis(self, strTitle):
self.titleAnalysis = strTitle
def getTitleAnalysis(self):
return self.titleAnalysis
def setZenithCut(self, strCut):
if strCut=='No' or strCut=='no':
self.ZenithCut = 'No'
self.ZenithCutLow = 0
self.ZenithCutUp = 70
return 0
elif len(strCut)==6 and strCut[2:4]=="to" and int(strCut[0:2])>=0 and int(strCut[4:6])<=70 and int(strCut[0:2])<int(strCut[4:6]) :
self.ZenithCut = strCut
self.ZenithCutLow = int(strCut[0:2])
self.ZenithCutUp = int(strCut[4:6])
else:
print strCut, "cannot be set as ZenithCut."
return 1
# def setZenithCut(self, nCutLow, nCutUp):
# if nCutLow>=0 and nCutUp<=100 and nCutLow<nCutUp:
# self.ZenithCut = '{0}to{1}'.format(nCutLow, nCutUp)
# self.ZenithCutLow = float(nCutLow)
# self.ZenithCutUp = float(nCutUp)
# return 0
# else:
# print nCutLow, 'to', nCutUp, "cannot be set as ZenithCut."
# return 1
def getZenithCut(self):
return self.ZenithCut
def getZenithCutLow(self):
return self.ZenithCutLow
def getZenithCutUp(self):
return self.ZenithCutUp
def setTransCut9km(self, nCutVal):
if nCutVal=='No' or nCutVal=='no':
self.TransCut9km = 'No'
return 0
elif nCutVal>=0 and nCutVal<=100:
self.TransCut9km = '{0}'.format(nCutVal)
return 0
else:
print nCutVal, "cannot be set as TransCut9km."
return 1
def setCloudCut(self, nCutVal):
if nCutVal=='No' or nCutVal=='no':
self.CloudCut = 'No'
return 0
elif nCutVal>=0 and nCutVal<=100:
self.CloudCut = '{0}'.format(nCutVal)
return 0
else:
print nCutVal, "cannot be set as CloudCut."
return 1
def setDcCut(self, nCutVal):
if nCutVal=='No' or nCutVal=='no':
self.DcCut = 'No'
return 0
elif nCutVal>=0:
self.DcCut = '{0}'.format(nCutVal)
return 0
else:
print nCutVal, "cannot be set as DcCut."
return 1
def getTimesOption(self):
return self.bTimesOption
def getVersionMC(self):
return self.strVersionMC
def getTransCut9km(self):
return self.TransCut9km
def getCloudCut(self):
return self.CloudCut
def getNumStarCut(self):
return self.NumStarCut
def getSettingsDC(self):
return self.settingsDC
def getDcCut(self):
return self.DcCut
def getPathBase(self):
return self.PATH_BASE
def getPathDirMC(self):
return self.PATH_DIR_MC
def getPathMarssys(self):
return self.PATH_MARSSYS
def getPathPythonModuleMine(self):
return self.PATH_PYTHON_MODULE_MINE
def getPathDirRc(self):
return self.PATH_DIR_RC
def getConfigName(self):
return self.nameCfg
def getSourceName(self):
return self.nameSrc
def getTimeThisNight(self, strFmt='', bInt=False):
timeTmp = self.timeThisNight
if strFmt=='':
return timeTmp
elif strFmt=='short':
strTemp = timeTmp.value
#strShort = '{0}{1}{2}'.format(strTemp[:4], strTemp[5:7], strTemp[8:])
strShort = MakeShortDateExpression(strTemp)
return strShort
else:
timeTmp.format = strFmt
if bInt==True:
return int(timeTmp.value)
else:
return timeTmp.value
def getIsoThisNight(self):
return self.isoThisNight
def getTitleAnalysis(self):
return self.titleAnalysis
# def getMjdThisNight(self):
# return self.mjdThisNight
def getPathDirSpot(self):
return self.pathDirSpot
def getPathDirCondition(self):
return self.pathDirCondition
def getPathDirSsignal(self):
return self.pathDirSsignal
def getPathDirCalibrated(self):
return self.pathDirCalibrated
# def getPathDirCalibratedMC(self):
# return self.pathDirCalibratedMC
def getPathDirCalibratedOFF(self):
return self.pathDirCalibratedOFF
def getPathDirStar(self):
return self.pathDirStar
def getPathDirStarMC(self):
return self.pathDirStarMC
def getPathDirStarOFF(self):
return self.pathDirStarOFF
def getPathDirStarCrab(self):
return self.pathDirStarCrab
def getPathDirSuperstarOFF(self):
return self.pathDirSuperstarOFF
def getPathDirSuperstarCrab(self):
return self.pathDirSuperstarCrab
def getPathDirSuperstarMC(self):
return self.pathDirSuperstarMC
def getPathDirMelibeaMC(self):
return self.pathDirMelibeaMC
def getPathDirMelibeaNonStdMC(self):
return self.pathDirMelibeaNonStdMC
def getPathDirSuperstar(self):
return self.pathDirSuperstar
def getPathDirSuperstarUsed(self):
return self.pathDirSuperstarUsed
def getPathDirQuate(self):
return self.pathDirQuate
def getPathDirQuateOFF(self):
return self.pathDirQuateOFF
def getPathDirQuateCrab(self):
return self.pathDirQuateCrab
def getPathDirMelibea(self):
return self.pathDirMelibea
def getPathDirMelibeaCrab(self):
return self.pathDirMelibeaCrab
def getPathDirOdie(self):
return self.pathDirOdie
def getPathDirOdieCrab(self):
return self.pathDirOdieCrab
def getPathDirCaspar(self):
return self.pathDirCaspar
def getPathDirFlute(self):
return self.pathDirFlute
def getPathDirFluteCrab(self):
return self.pathDirFluteCrab
def getPathDirCoach(self):
return self.pathDirCoach
def getPathDirCoachNonStd(self):
return self.pathDirCoachNonStd
def getPathDirNightlyFlute(self):
return self.pathDirNightlyFlute
def makeDirs(self, bSuperstar=True, bCalibrated=True, bQuate=True, bQuateCrab=True, bMelibea=True, bOdie=True, bOdieCrab=True, bCaspar=True, bFlute=True, bNightlyFlute=True, bSuperstarCrab=True, bStarCrab=True, bStar=True, bStarMC=True, bSuperstarMC=True, bMelibeaNonStdMC=True, bMelibeaCrab=True, bFluteCrab=True, bSsignal=True, bStarOFF=True, bCalibratedOFF=True, bSuperstarOFF=True, bCoachNonStd=True):
"""Make directories for analysis, following the configuration set by setSubDirs.
.makeDirs(bSuperstar=True, bQuate=True, bQuateCrab=True, bMelibea=True, bOdie=True, bOdieCrab=True, bCaspar=True, bFlute=True, bSuperstarCrab=True, bStarCrab=True, bStar=True, bStarMC=True, bSuperstarMC=True, bMelibeaNonStdMC=True, bMelibeaCrab=True, bFluteCrab=True, bSsignal=True, bStarOFF=True, bSuperstarOFF=True, bCoachNonStd=True):
"""
if bSsignal==True:
#os.makedirs('{0}'.format(self.getPathDirSsignal()))
aTel = ['M1', 'M2']
for tel in aTel:
pathDirWork = '{0}/{1}'.format(self.getPathDirSsignal(), tel)
if path.exists(pathDirWork)==False:
os.makedirs(pathDirWork)
if bCalibrated==True:
aTel = ['M1', 'M2']
for tel in aTel:
pathDirWork = '{0}/{1}'.format(self.getPathDirCalibrated(), tel)
if path.exists(pathDirWork)==False:
os.makedirs(pathDirWork)
os.chdir(pathDirWork)
print os.getcwd()
# if bCalibratedMC==True:
# aTel = ['M1', 'M2']
# aSet = ['TRAIN', 'TEST']
# for tel in aTel:
# for dset in aSet:
# pathDirWork = '{0}/{1}/{2}'.format(self.getPathDirCalibratedMC(), tel, dset)
# if path.exists(pathDirWork)==False:
# os.makedirs(pathDirWork)
# os.chdir(pathDirWork)
# print os.getcwd()
if bCalibratedOFF==True:
aTel = ['M1', 'M2']
for tel in aTel:
pathDirWork = '{0}/{1}'.format(self.getPathDirCalibratedOFF(), tel)
if path.exists(pathDirWork)==False:
os.makedirs(pathDirWork)
if bStar==True:
aTel = ['M1', 'M2']
for tel in aTel:
pathDirWork = '{0}/{1}'.format(self.getPathDirStar(), tel)
if path.exists(pathDirWork)==False:
os.makedirs(pathDirWork)
os.chdir(pathDirWork)
print os.getcwd()
if bStarMC==True:
aTel = ['M1', 'M2']
aSet = ['TRAIN', 'TEST']
for tel in aTel:
for dset in aSet:
pathDirWork = '{0}/{1}/{2}'.format(self.getPathDirStarMC(), tel, dset)
if path.exists(pathDirWork)==False:
os.makedirs(pathDirWork)
os.chdir(pathDirWork)
print os.getcwd()
#os.makedirs('TRAIN')
#os.makedirs('TEST')
# shutil.copy('{0}/star_{1}_OSA.rc'.format(self.getPathDirRc(), tel), './star_{0}_{1}.rc'.format(tel, self.getTimeThisNight('short', True)))
#pathDirWork = '{0}/{1}'.format(self.getPathDirStarMC(), tel)
if bStarOFF==True:
# os.makedirs('{0}'.format(self.getPathDirStarOFF()))
aTel = ['M1', 'M2']
for tel in aTel:
pathDirWork = '{0}/{1}'.format(self.getPathDirStarOFF(), tel)
if path.exists(pathDirWork)==False:
os.makedirs(pathDirWork)
if bStarCrab==True:
#os.makedirs('{0}'.format(self.getPathDirStarCrab()))
aTel = ['M1', 'M2']
for tel in aTel:
pathDirWork = '{0}/{1}'.format(self.getPathDirStarCrab(), tel)
if path.exists(pathDirWork)==False:
os.makedirs(pathDirWork)
if bSuperstarMC==True:
aSet = ['TRAIN', 'TEST']
for dset in aSet:
pathDirWork = '{0}/{1}'.format(self.getPathDirSuperstarMC(), dset)
if path.exists(pathDirWork)==False:
os.makedirs(pathDirWork)
os.chdir(pathDirWork)
print os.getcwd()
if bSuperstarOFF==True:
pathDirWork = self.getPathDirSuperstarOFF()
if path.exists(pathDirWork)==False:
os.makedirs(pathDirWork)
os.chdir(pathDirWork)
print os.getcwd()
if bSuperstarCrab==True:
pathDirWork = self.getPathDirSuperstarCrab()
if path.exists(pathDirWork)==False:
os.makedirs(pathDirWork)
os.chdir(pathDirWork)
print os.getcwd()
if bCoachNonStd==True:
pathDirWork = self.getPathDirCoachNonStd()
if path.exists(pathDirWork)==False:
os.makedirs(pathDirWork)
os.chdir(pathDirWork)
print os.getcwd()
if bMelibeaNonStdMC==True:
aSet = ['TRAIN', 'TEST']
for dset in aSet:
#os.makedirs('{0}'.format(self.getPathDirMelibeaMC()))
pathDirWork = '{0}/{1}'.format(self.getPathDirMelibeaNonStdMC(), dset)
if path.exists(pathDirWork)==False:
os.makedirs(pathDirWork)
os.chdir(pathDirWork)
print os.getcwd()
#os.makedirs('TRAIN')
#os.makedirs('TEST')
if bSuperstar==True and path.exists('{0}'.format(self.getPathDirSuperstar()))==False:
os.makedirs('{0}'.format(self.getPathDirSuperstar()))
if bQuate==True and path.exists('{0}'.format(self.getPathDirQuate()))==False:
os.makedirs('{0}'.format(self.getPathDirQuate()))
if bQuateCrab==True and path.exists('{0}'.format(self.getPathDirQuateCrab()))==False:
os.makedirs('{0}'.format(self.getPathDirQuateCrab()))
if bMelibea==True and path.exists('{0}'.format(self.getPathDirMelibea()))==False:
os.makedirs('{0}'.format(self.getPathDirMelibea()))
if bMelibeaCrab==True and path.exists('{0}'.format(self.getPathDirMelibeaCrab()))==False:
os.makedirs('{0}'.format(self.getPathDirMelibeaCrab()))
if bOdie==True and path.exists('{0}'.format(self.getPathDirOdie()))==False:
os.makedirs('{0}'.format(self.getPathDirOdie()))
if bOdieCrab==True and path.exists('{0}'.format(self.getPathDirOdieCrab()))==False:
os.makedirs('{0}'.format(self.getPathDirOdieCrab()))
if bCaspar==True and path.exists('{0}'.format(self.getPathDirCaspar()))==False:
os.makedirs('{0}'.format(self.getPathDirCaspar()))
if bFlute==True:
#os.makedirs('{0}'.format(self.getPathDirFlute()))
pathDirWork = ''
aBinning = ['single-bin', 'run-wise', 'night-wise', 'custom']
for wise in aBinning:
pathDirWork = '{0}/{1}'.format(self.getPathDirFlute(), wise)
if path.exists(pathDirWork)==False:
os.makedirs(pathDirWork)
os.chdir(pathDirWork)
print os.getcwd()
os.chdir('..')
if bNightlyFlute==True:
pathDirWork = self.getPathDirNightlyFlute()
if path.exists(pathDirWork)==False:
os.makedirs(pathDirWork)
os.chdir(pathDirWork)
print os.getcwd()
os.chdir('..')
if bFluteCrab==True:
pathDirWork = ''
aBinning = ['single-bin']
for wise in aBinning:
pathDirWork = '{0}/{1}'.format(self.getPathDirFluteCrab(), wise)
if path.exists(pathDirWork)==False:
os.makedirs(pathDirWork)
os.chdir(pathDirWork)
print os.getcwd()
os.chdir('..')
def quate(self):
SetEnvironForMARS("5.34.24")
os.chdir(self.getPathDirQuate())
print os.getcwd()
#if path.exists('{0}/quate_{1}.rc'.format(self.getPathDirRc(), self.getConfigName()))==False:
# print '{0}/quate_{1}.rc'.format(self.getPathDirRc(), self.getConfigName()), 'does not exist.'
# return 1
#shutil.copy('{0}/quate_{1}.rc'.format(self.getPathDirRc(), self.getConfigName()), './quate.rc')
if self.getTransCut9km()!='No':
bTransCut = 'yes'
vTransCut = float(self.getTransCut9km())/100.
else:
bTransCut = 'no'
vTransCut = 1.00
if self.getCloudCut()!='No':
bCloudCut = 'yes'
vCloudCut = int(self.getCloudCut())
else:
bCloudCut = 'no'
vCloudCut = 100
if self.getNumStarCut()!='No':
bNumStarCut = 'yes'
vNumStarCut = int(self.getNumStarCut())
else:
bNumStarCut = 'no'
vNumStarCut = 100
strQuate="""
UseDCCuts: yes
DCMax: {0} // for stereo and MAGIC-II, while 1500. for only MAGIC-I
ZdMin: {1}
ZdMax: {2}
UseAerosolTrans9km: {3}
MinAerosolTrans9km: {4}
UseCloudCuts: {5}
CloudinessMax: {6}
UseNumberStarsCuts: {7}
NumberStarsMin: {8}
""".format(self.getDcCut(), self.getZenithCutLow(), self.getZenithCutUp(), bTransCut, vTransCut, bCloudCut, vCloudCut, bNumStarCut, vNumStarCut)
pathRcNew = '{0}/quate.rc'.format(self.getPathDirQuate())
rcNew = open(pathRcNew, 'w')
rcNew.write(strQuate)
rcOrig = open('{0}/mrcfiles/quate.rc'.format(self.getPathMarssys()), 'r')
rcCopied = rcOrig.read()
rcNew.write(rcCopied)
rcOrig.close()
rcNew.close()
subprocess.call(['head', '-n 20', pathRcNew])
if self.getTimesOption()==True:
aCmd = [ 'quate', '-b', '--stereo', '-f', '--config={0}'.format(pathRcNew), '--ind={0}'.format(self.getPathDirSuperstar()), '--out=.', '--times' ]
else:
aCmd = [ 'quate', '-b', '--stereo', '-f', '--config={0}'.format(pathRcNew), '--ind={0}'.format(self.getPathDirSuperstar()), '--out=.' ]
print aCmd
subprocess.call(aCmd)
if os.environ['OSTYPE'][:6]=='darwin':
subprocess.call(['open', 'Overview.pdf'])
subprocess.call(['open', '.'])
elif os.environ['OSTYPE']=='linux':
subprocess.call(['evince', 'Overview.pdf'])
if self.getTimesOption()==True:
print "M1 excluded:"
subprocess.call(['cat', '{0}/excluded_1.times'.format(self.getPathDirQuate())])
print "M2 excluded:"
subprocess.call(['cat', '{0}/excluded_2.times'.format(self.getPathDirQuate())])
else:
print "good:"
subprocess.call(['ls', '{0}/good'.format(self.getPathDirQuate())])
print "bad:"
subprocess.call(['ls', '{0}/bad'.format(self.getPathDirQuate())])
print "out-of-zd:"
subprocess.call(['ls', '{0}/out-of-zd'.format(self.getPathDirQuate())])
def quateOFF(self):
SetEnvironForMARS("5.34.24")
os.chdir(self.getPathDirSuperstarOFF())
shellCom('unlink good/*.root out-of-zd/*.root out-of-az/*.root bad/*.root')
print os.getcwd()
if path.exists('{0}/quate.rc'.format(self.getPathDirQuate()))==False:
print '{0}/quate.rc'.format(self.getPathDirQuate()), 'does not exist.'
return 1
str_zenith = """ZdMin: {0}
ZdMax: {1}""".format(max(0, self.getZenithCutLow()-5), self.getZenithCutUp()+5)
AddToRcFile(strAdd, pathFileOriginal='{0}/quate.rc'.format(self.getPathDirQuate()), pathFileTarget='quate_OFF.rc')
aCmd = [ 'quate', '-b', '--stereo', '-f', '--config={0}/quate_OFF.rc'.format(self.getPathDirQuate()), '--ind={0}'.format(self.getPathDirSuperstarOFF()), '--out={0}'.format(self.getPathDirSuperstarOFF()) ]
print aCmd
subprocess.call(aCmd)
if os.environ['OSTYPE'][:6]=='darwin':
subprocess.call(['open', 'Overview.pdf'])
subprocess.call(['open', '.'])
elif os.environ['OSTYPE']=='linux':
subprocess.call(['evince', 'Overview.pdf'])
#print "M1 excluded:"
#subprocess.call(['cat', '{0}/excluded_1.times'.format(self.getPathDirQuate())])
#print "M2 excluded:"
#subprocess.call(['cat', '{0}/excluded_2.times'.format(self.getPathDirQuate())])
def quateCrab(self):
SetEnvironForMARS("5.34.24")
os.chdir(self.getPathDirQuateCrab())
print os.getcwd()
aCmd = [ 'quate', '-b', '--stereo', '-f', '--config={0}/quate.rc'.format(self.getPathDirQuate()), '--ind={0}'.format(self.getPathDirSuperstarCrab()), '--out=.', '--times' ]
print aCmd
subprocess.call(aCmd)
if os.environ['OSTYPE'][:6]=='darwin':
subprocess.call(['open', 'Overview.pdf'])
subprocess.call(['open', '.'])
elif os.environ['OSTYPE']=='linux':
subprocess.call(['evince', 'Overview.pdf'])
print "M1 excluded:"
subprocess.call(['cat', '{0}/excluded_1.times'.format(self.getPathDirQuateCrab())])
print "M2 excluded:"
subprocess.call(['cat', '{0}/excluded_2.times'.format(self.getPathDirQuateCrab())])
def coach(self):
pathDirWork = self.getPathDirCoachNonStd()
os.chdir(pathDirWork)
print os.getcwd()
SetEnvironForMARS("5.34.24")
# Modify RC file
strRcAdd = """RF.mcdata: {0}/TRAIN/GA_za*_TRAIN_S_wr.root
RF.data: {1}/good/20*_S_*.root
RF.outpath: {2}
RF.outname: coach_{3}
RF.zdmin: {4}
RF.zdmax: {5}
""".format(self.getPathDirSuperstarMC(), self.getPathDirSuperstarOFF(), self.getPathDirCoachNonStd(), self.getConfigName(), self.getZenithCutLow(), self.getZenithCutUp())
pathRcNew = './coach_{0}.rc'.format(self.getConfigName())
rcNew = open(pathRcNew, 'w')
rcNew.write(strRcAdd)
rcOrig = open('{0}/mrcfiles/coach.rc'.format(self.getPathMarssys()), 'r')
rcCopied = rcOrig.read()
#print rcCopied
rcNew.write(rcCopied)
rcOrig.close()
rcNew.close()
subprocess.call(['head', '-n 20', pathRcNew])
aCmd = [ 'coach', '--config=./coach_{0}.rc'.format(self.getConfigName()), '-RFgh', '-RFdisp', '-LUTs', '-q', '-b', '-RFenStereo']
print aCmd
subprocess.call(aCmd)
#aCmd = 'coach --config=./coach_{0}.rc -RFgh -RFdisp -LUTs -q -b'.format(self.getConfigName())
#SubmitPJ(aCmd, pathDirWork, 'Coach')
#bCmd = 'coach --config=./coach_{0}.rc -RFdisp -q -b'.format(self.getConfigName())
#SubmitPJ(bCmd, pathDirWork, 'RFdisp')
#cCmd = 'coach --config=./coach_{0}.rc -LUTs -q -b'.format(self.getConfigName())
#SubmitPJ(cCmd, pathDirWork, 'LUTs')
def melibea(self, bCoachNonStd="", strDesignate='20'):
if not isinstance(bCoachNonStd, bool):
bCoachNonStd=self.getSettingsDC().getBoolTunedTrain()
if bCoachNonStd==True:
pathCoachNonStd = self.getPathDirCoachNonStd()
else:
pathCoachNonStd=self.getPathDirCoach()
# if pathCoachNonStd=="":
# pathCoachNonStd = self.getPathDirCoach()
os.chdir(self.getPathDirMelibea())
print os.getcwd()
SetEnvironForMARS("5.34.24")
strZd = """
# Zenith Cuts
RF.zdmin: default: {0}
RF.zdmax: default: {1}
""".format(self.getZenithCutLow(), self.getZenithCutUp())
pathRcNew = '{0}/melibea_stereo.rc'.format(self.getPathDirMelibea())
rcNew = open(pathRcNew, 'w')
rcNew.write(strZd)
rcOrig = open('{0}/mrcfiles/melibea_stereo.rc'.format(self.getPathMarssys()), 'r')
rcCopied = rcOrig.read()
rcNew.write(rcCopied)
rcOrig.close()
rcNew.close()
if self.getTimesOption()==True:
aCmd = [ 'melibea', '-b', '-q', '--config={0}'.format(pathRcNew), '--ind={0}/{1}*_S_*.root'.format(self.getPathDirSuperstarUsed(), strDesignate), '--out=./', '--stereo', '--rf', '--rftree={0}/RF.root'.format(pathCoachNonStd), '--calc-disp-rf', '--rfdisptree={0}/disp1/DispRF.root'.format(pathCoachNonStd), '--calc-disp2-rf', '--rfdisp2tree={0}/disp2/DispRF.root'.format(pathCoachNonStd), '--calcstereodisp', '--disp-rf-sstrained', '-erec', '--etab={0}/Energy_Table.root'.format(pathCoachNonStd), '--timeslices={0}/excluded.times'.format(self.getPathDirQuate()) ] #, '-erec-rf', '--erf={0}/EnRF_Stereo.root'.format(pathCoachNonStd) ]
else:
aCmd = [ 'melibea', '-b', '-q', '--config={0}'.format(pathRcNew), '--ind={0}/{1}*_S_*.root'.format(self.getPathDirSuperstarUsed(), strDesignate), '--out=./', '--stereo', '--rf', '--rftree={0}/RF.root'.format(pathCoachNonStd), '--calc-disp-rf', '--rfdisptree={0}/disp1/DispRF.root'.format(pathCoachNonStd), '--calc-disp2-rf', '--rfdisp2tree={0}/disp2/DispRF.root'.format(pathCoachNonStd), '--calcstereodisp', '--disp-rf-sstrained', '-erec', '--etab={0}/Energy_Table.root'.format(pathCoachNonStd) ] #, '-erec-rf', '--erf={0}/EnRF_Stereo.root'.format(pathCoachNonStd) ]
if self.bForce==True:
aCmd.append('-f')
print aCmd
subprocess.call(aCmd)
def melibeaCrab(self, bCoachNonStd=False):
if bCoachNonStd==True:
pathCoachNonStd = self.getPathDirCoachNonStd()
else:
pathCoachNonStd=self.getPathDirCoach()
# if pathCoachNonStd=="":
# pathCoachNonStd = self.getPathDirCoach()
os.chdir(self.getPathDirMelibeaCrab())
print os.getcwd()
SetEnvironForMARS("5.34.24")
aCmd = [ 'melibea', '-b', '-q', '-f', '--config={0}/melibea_stereo.rc'.format(self.getPathDirMelibea()), '--ind={0}/20*_S_*.root'.format(self.getPathDirSuperstarCrab()), '--out=./', '--stereo', '--rf', '--rftree={0}/RF.root'.format(pathCoachNonStd), '--calc-disp-rf', '--rfdisptree={0}/disp1/DispRF.root'.format(pathCoachNonStd), '--calc-disp2-rf', '--rfdisp2tree={0}/disp2/DispRF.root'.format(pathCoachNonStd), '--calcstereodisp', '--disp-rf-sstrained', '-erec', '--etab={0}/Energy_Table.root'.format(pathCoachNonStd), '--timeslices={0}/excluded.times'.format(self.getPathDirQuateCrab()), '-erec-rf', '--erf={0}/EnRF_Stereo.root'.format(pathCoachNonStd) ]
print aCmd
subprocess.call(aCmd)
# def melibeaMC(self, bTrain=False, bTest=True, bCoachNonStd=False):
def melibeaMC(self, bTrain="", bTest="", bCoachNonStd=""):
if not isinstance(bTrain, bool):
bTrain=self.getSettingsDC().getBoolTunedTrain()
if not isinstance(bTest, bool):
bTest=self.getSettingsDC().getBoolTunedTest()
if not isinstance(bCoachNonStd, bool):
bCoachNonStd=self.getSettingsDC().getBoolTunedTrain()
SetEnvironForMARS("5.34.24")
#if pathCoachNonStd=="":
# pathCoachNonStd=self.getPathDirCoach()
if bCoachNonStd==True:
pathCoachNonStd = self.getPathDirCoachNonStd()
else:
pathCoachNonStd=self.getPathDirCoach()
aDSet=[]
if bTrain==True:
aDSet.append('TRAIN')
if bTest==True:
aDSet.append('TEST')
for dset in aDSet:
pathDirWork = '{0}/{1}'.format(self.getPathDirMelibeaNonStdMC(), dset)
os.chdir(pathDirWork)
print os.getcwd()
aCmd = [ 'melibea', '-b', '-q', '-f', '--config={0}/melibea_stereo.rc'.format(self.getPathDirMelibea()), '--ind={0}/{1}/GA_za*{1}_S_wr.root'.format(self.getPathDirSuperstarMC(), dset), '--out=./', '--stereo', '--rf', '--rftree={0}/RF.root'.format(pathCoachNonStd), '--calc-disp-rf', '--rfdisptree={0}/disp1/DispRF.root'.format(pathCoachNonStd), '--calc-disp2-rf', '--rfdisp2tree={0}/disp2/DispRF.root'.format(pathCoachNonStd), '--calcstereodisp', '--disp-rf-sstrained', '-erec', '--etab={0}/Energy_Table.root'.format(pathCoachNonStd), '-mc' ] #, '-erec-rf', '--erf={0}/EnRF_Stereo.root'.format(pathCoachNonStd) ]
print aCmd
subprocess.call(aCmd)
def melibeaNonStdMC(self, bCoachNonStd=True):
if bCoachNonStd==True:
pathCoachNonStd = self.getPathDirCoachNonStd()
else:
pathCoachNonStd=self.getPathDirCoach()
#if pathCoachNonStd=="":
# pathCoachNonStd = self.getPathDirCoach()
os.chdir(self.getPathDirMelibeaNonStdMC())
print os.getcwd()
SetEnvironForMARS("5.34.24")
aCmd = [ 'melibea', '-mc', '-b', '-q', '-f', '--config={0}/melibea_stereo.rc'.format(self.getPathDirMelibea()), '--ind={0}/GA_*_S_*.root'.format(self.getPathDirSuperstarMC()), '--out=./', '--stereo', '--rf', '--rftree={0}/RF.root'.format(pathCoachNonStd), '--calc-disp-rf', '--rfdisptree={0}/disp1/DispRF.root'.format(pathCoachNonStd), '--calc-disp2-rf', '--rfdisp2tree={0}/disp2/DispRF.root'.format(pathCoachNonStd), '--calcstereodisp', '--disp-rf-sstrained', '-erec', '--etab={0}/Energy_Table.root'.format(pathCoachNonStd) ] #, '-erec-rf', '--erf={0}/EnRF_Stereo.root'.format(pathCoachNonStd) ]
print aCmd
subprocess.call(aCmd)
def odie(self, bLE=True, bFR=True, bHE=False, bDisplay=True, nightDesignate='', runDesignate='', pathDirSup=''):
desig = Designate(nightDesignate, runDesignate)
pathDirWork = ''
aER = []
if bLE==True:
aER.append('LE')
if bFR==True:
aER.append('FR')
if bHE==True:
aER.append('HE')
for er in aER:
if pathDirSup=='':
pathDirWork = '{0}/{1}'.format(self.getPathDirOdie(), er)
else:
pathDirWork = '{0}/{1}'.format(pathDirSup, er)
if path.exists(pathDirWork)==False:
os.makedirs(pathDirWork)
os.chdir(pathDirWork)
print os.getcwd()
SetEnvironForMARS("5.34.24")
strOutput = '{0}{1}_{2}'.format(desig[1], self.getConfigName(), er)
pathOutput = '{0}/Output_odie_{1}.root'.format(pathDirWork, strOutput)
#shutil.copy('{0}/odie_{1}_{2}.rc'.format(self.getPathDirRc(), self.getConfigName(), er), './odie.rc')
strData = """Odie.dataName: {0}/{1}*_Q_*.root
Odie.outFileName: {2}
Odie.deadTime: 26.e-6
""".format(self.getPathDirMelibea(), desig[0], pathOutput)
strCut = ""
if er == "LE":
strCut = """
# For low energy (LE) analysis
# Sensitivity ~ 1.2% Crab
Odie.analysisEpoch: Jul13
Odie.eRange: LE
Odie.signalCut: 0.02
Odie.psf40: 0.056
Odie.psftailfract: 0.462
Odie.psftailsigma: 0.115
"""
elif er == "FR":
strCut = """
# For full range (FR) analysis
# Sensitivity ~ 0.7% Crab
Odie.analysisEpoch: Jul13
Odie.eRange: FR
Odie.signalCut: 0.009
Odie.psf40: 0.046
Odie.psftailfract: 0.356
Odie.psftailsigma: 0.084
"""
elif er == "HE":
strCut = """
# For high energy (HE) analysis
# Sensitivity ~ 1.% Crab
Odie.analysisEpoch: Jul13
Odie.eRange: HE
Odie.signalCut: 0.007
Odie.psf40: 0.037
Odie.psftailfract: 0.356
Odie.psftailsigma: 0.070
"""
strZenith = """
Odie.minZenith: {0}
Odie.maxZenith: {1}
""".format(self.getZenithCutLow(), self.getZenithCutUp())
strAdd = strData + strCut + strZenith
AddToRcFile(strAdd, "{0}/mrcfiles/odie.rc".format(self.getPathMarssys()), "{0}/odie_{1}.rc".format(pathDirWork, strOutput))
aCmd = [ 'odie', '-b', '-q', '--config=./odie_{0}.rc'.format(strOutput), '--ind={0}/{1}*_Q_*.root'.format(self.getPathDirMelibea(), desig[0]) ]
print aCmd
subprocess.call(aCmd)
GetOdieResults(pathOutput, None, None)
SetEnvironForMARS("5.34.14")
subprocess.call([ 'root', '-b', '-q', '{0}/MarsUtil/SaveTh2OnAndOffCan.C("{1}", "{2}", "{3}")'.format(self.getPathPythonModuleMine(), pathOutput, self.getSourceName(), strOutput)]) #self.getTitleAnalysis())])
#pathImage = '{0}/th2OnAndOffCan_{1}_{2}_{3}.png'.format(pathDirWork, self.getSourceName(), self.getTitleAnalysis(), er)
pathImage = '{0}/th2OnAndOffCan_{1}_{2}.png'.format(pathDirWork, self.getSourceName(), strOutput)
print pathImage
if bDisplay==True:
catchImage(pathImage)
if os.environ['OSTYPE'][:6]=='darwin':
subprocess.call(['open', '..'])
def odieAllRunByRun(self, bLE=True, bFR=True, bHE=False, strFileInitial='20'):
aFile = glob.glob('{0}/{1}*_Q_*.root'.format(self.getPathDirMelibea(), strFileInitial))
self.listAllRuns(aFile)
for runUiq in self.LST_ALLRUNS:
print '=====', runUiq, '====='
pathDirOut = '{0}/{1}'.format(self.getPathDirNightlyFlute(), self.DCT_RUN2NIGHT[runUiq])
self.odie(bLE=True, bFR=True, bHE=False, bDisplay=False, runDesignate=runUiq, pathDirSup=pathDirOut)
def odieCrab(self, bLE=True, bFR=True, bHE=False):
pathDirWork = ''
aER = []
if bLE==True:
aER.append('LE')
if bFR==True:
aER.append('FR')
if bHE==True:
aER.append('HE')
for er in aER:
pathDirWork = '{0}/{1}'.format(self.getPathDirOdieCrab(), er)
if path.exists(pathDirWork)==False:
os.makedirs(pathDirWork)
os.chdir(pathDirWork)
print os.getcwd()
os.symlink('{0}/{1}/odie.rc'.format(self.getPathDirOdie(), er), "{0}/odie.rc".format(pathDirWork))
SetEnvironForMARS("5.34.24")
#shutil.copy('{0}/odie_{1}_{2}.rc'.format(self.getPathDirRc(), self.getConfigName(), er), './odie.rc')
#aCmd = [ 'odie', '-b', '-q', '--config={0}/{1}/odie.rc'.format(self.getPathDirOdie(), er), '--ind={0}/20*_Q_*.root'.format(self.getPathDirMelibeaCrab()) ]
aCmd = [ 'odie', '-b', '-q', '--config=./odie.rc', '--ind={0}/20*_Q_*.root'.format(self.getPathDirMelibeaCrab()) ]
print aCmd
subprocess.call(aCmd)
SetEnvironForMARS("5.34.14")
subprocess.call([ 'root', '-b', '-q', '{0}/MarsUtil/SaveTh2OnAndOffCan.C("Output_odie.root", "{1}", "CrabSanityCheck_{2}_{3}")'.format(self.getPathPythonModuleMine(), self.getSourceName(), self.getTitleAnalysis(), er)])
if os.environ['OSTYPE'][:6]=='darwin':
subprocess.call(['open', 'th2OnAndOffCan_{0}_CrabSanityCheck_{1}_{2}.png'.format(self.getSourceName(), self.getTitleAnalysis(), er)])
else:
subprocess.call(['eog', 'th2OnAndOffCan_{0}_CrabSanityCheck_{1}_{2}.png'.format(self.getSourceName(), self.getTitleAnalysis(), er)])
if os.environ['OSTYPE'][:6]=='darwin':
subprocess.call(['open', '..'])
def flute(self, eth=300, assumedSpectrum="", redshift="", bMelibeaNonStdMc="", bNightWise=True, bRunWise=True, bSingleBin=False, bCustom=False, fluxMaxInCrab=1.1, nightDesignate='', runDesignate='', bDisplay=True, nameSubDirWork='', emin=10, emax=100000, nebin=0, nbinAz=1, pathCustomBinRefer="", bForce=False, bEnRF=False, bAtmCorr=True, pathPreviousSpec="", wCustomBin=3.0):#, pathFindConfig=''):#, pathPreviousSpec=""):
SetEnvironForMARS("5.34.24")
if not isinstance(bMelibeaNonStdMc, bool):
bMelibeaNonStdMc=self.getSettingsDC().getBoolTunedTest()
if bMelibeaNonStdMc==True:
pathMelibeaMC = self.getPathDirMelibeaNonStdMC()
else:
pathMelibeaMC = self.getPathDirMelibeaMC()
if nightDesignate=='':
if runDesignate=='':
strInDesignate = '20'
strOutDesignate = ''
else:
strInDesignate = '20*_{0}'.format(runDesignate)
strOutDesignate = 'run{0}_'.format(runDesignate)
else:
if runDesignate=='':
strInDesignate = nightDesignate
strOutDesignate = '{0}_'.format(nightDesignate)
else:
strInDesignate = '{0}_{1}'.format(nightDesignate, runDesignate)
strOutDesignate = '{0}run{1}_'.format(nightDesignate, runDesignate)
strRcData=''
strRcData="""
flute.mcdata: {0}/TEST/GA_*_Q_*.root
flute.data: {1}/{2}*_Q_*.root
""".format(pathMelibeaMC, self.getPathDirMelibea(), strInDesignate)
strRcZd="""flute.minZd: {0}
flute.maxZd: {1}
""".format(self.getZenithCutLow(), self.getZenithCutUp())
strRcSize = ""
if float(self.getDcCut())>=4000 or eth>=500:
strRcSize = """flute.minSize: 100.
"""
if redshift=="":
redshift = GetRedshift(self.getSourceName())
strRcRedshift = """flute.SourceRedshift: {0}
""".format(redshift)
strRcAtmCorr = """flute.AeffAtmCorr: {0}
""".format(int(bAtmCorr))
if pathPreviousSpec!="":
if path.exists(pathPreviousSpec)==False:
print pathPreviousSpec, 'does not exist!!!'
return 1
filePrev = ROOT.TFile(pathPreviousSpec, 'READ')
if os.path.basename(pathPreviousSpec)[:12]=='Output_flute':
sedPrev = filePrev.Get('DeabsorbedSED')
# Power-law
fcPWL = ROOT.TF1('fcPWL', '[0]*TMath::Power(x/[1], 2.+[2])', 1, 100000)
fcPWL.SetParameter(0, 1e-10)
fcPWL.FixParameter(1, eth)
fcPWL.SetParLimits(2, -4, -1)
fcPWL.SetParameter(2, -2.31)
sedPrev.Fit(fcPWL, "", "goff", emin, emax)
chisqPWL = fcPWL.GetChisquare()
if sedPrev.GetN()>2: