diff --git a/utilities/mutational_load_snpeff/slurm/profile/config_plugin_dardel.yaml b/utilities/mutational_load_snpeff/slurm/profile/config_plugin_dardel.yaml index 32cb4b9..8c0f641 100644 --- a/utilities/mutational_load_snpeff/slurm/profile/config_plugin_dardel.yaml +++ b/utilities/mutational_load_snpeff/slurm/profile/config_plugin_dardel.yaml @@ -4,6 +4,8 @@ executor: slurm jobs: 100 printshellcmds: true software-deployment-method: apptainer +use-apptainer: True +apptainer-args: "-B $PWD" # slurm resources ## default-resources: applied to all jobs, overruled by resources defined below for jobs