diff --git a/ActivityDefinition-example-study-data-dictionary-table-1-testing.html b/ActivityDefinition-example-study-data-dictionary-table-1-testing.html index 0177db4f..8008bfd1 100644 --- a/ActivityDefinition-example-study-data-dictionary-table-1-testing.html +++ b/ActivityDefinition-example-study-data-dictionary-table-1-testing.html @@ -150,7 +150,7 @@ Childhood Cancer
  • - Using "Source" Data + Using "Source" Data
  • EHR Data @@ -266,7 +266,7 @@

    ActivityDefinition: Active - as of 2022-11-28 + as of 2022-12-09 @@ -309,7 +309,7 @@

    ActivityDefinition:

    - IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-11-28 + IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-12-09
    Links: Table of Contents | diff --git a/ActivityDefinition-example-study-data-dictionary-table-1.change.history.html b/ActivityDefinition-example-study-data-dictionary-table-1.change.history.html index 9f39daa4..4a97ae0c 100644 --- a/ActivityDefinition-example-study-data-dictionary-table-1.change.history.html +++ b/ActivityDefinition-example-study-data-dictionary-table-1.change.history.html @@ -154,7 +154,7 @@ Childhood Cancer

  • - Using "Source" Data + Using "Source" Data
  • EHR Data @@ -312,7 +312,7 @@

    : ActivityDefinition/example-study-data-dictionary-table-1 - Chang

    - IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-11-28 + IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-12-09
    Links: Table of Contents | diff --git a/ActivityDefinition-example-study-data-dictionary-table-1.html b/ActivityDefinition-example-study-data-dictionary-table-1.html index 6d9c6e9d..e968af22 100644 --- a/ActivityDefinition-example-study-data-dictionary-table-1.html +++ b/ActivityDefinition-example-study-data-dictionary-table-1.html @@ -150,7 +150,7 @@ Childhood Cancer

  • - Using "Source" Data + Using "Source" Data
  • EHR Data @@ -268,7 +268,7 @@

    Example ActivityDefinition: Data-Dictionary Table

    Active - as of 2022-11-28 + as of 2022-12-09 @@ -283,7 +283,7 @@

    Example ActivityDefinition: Data-Dictionary Table

    -

    Generated Narrative: ActivityDefinition

    Resource ActivityDefinition "example-study-data-dictionary-table-1"

    Profile: NCPI Study Data Dictionary Data Table

    url: https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1

    version: 0.2.0

    status: active

    date: 2022-11-28 09:07:57+0000

    publisher: NCPI FHIR Working Group

    contact: NCPI FHIR Working Group: https://github.com/nih-ncpi, Meen Chul Kim: meenchul@d3b.center

    topic: Research (umls#C0035168)

    code: Demographic data (Dataset CodeSystem (lists all tables)#demographics)

    observationResultRequirement:

    +

    Generated Narrative: ActivityDefinition

    Resource ActivityDefinition "example-study-data-dictionary-table-1"

    Profile: NCPI Study Data Dictionary Data Table

    url: https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1

    version: 0.2.0

    status: active

    date: 2022-12-09 17:30:30+0000

    publisher: NCPI FHIR Working Group

    contact: NCPI FHIR Working Group: https://github.com/nih-ncpi, Meen Chul Kim: meenchul@d3b.center

    topic: Research (umls#C0035168)

    code: Demographic data (Dataset CodeSystem (lists all tables)#demographics)

    observationResultRequirement:

    @@ -314,7 +314,7 @@

    Example ActivityDefinition: Data-Dictionary Table

    - IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-11-28 + IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-12-09
    Links: Table of Contents | diff --git a/ActivityDefinition-example-study-data-dictionary-table-1.json b/ActivityDefinition-example-study-data-dictionary-table-1.json index 22544f39..c0e4005e 100644 --- a/ActivityDefinition-example-study-data-dictionary-table-1.json +++ b/ActivityDefinition-example-study-data-dictionary-table-1.json @@ -1,73 +1,57 @@ -{ - "resourceType": "ActivityDefinition", - "id": "example-study-data-dictionary-table-1", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-table" - ] - }, - "text": { - "status": "generated", - "div": "

    Generated Narrative: ActivityDefinition

    Resource ActivityDefinition "example-study-data-dictionary-table-1"

    Profile: NCPI Study Data Dictionary Data Table

    url: https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1

    version: 0.2.0

    status: active

    date: 2022-11-28 09:07:57+0000

    publisher: NCPI FHIR Working Group

    contact: NCPI FHIR Working Group: https://github.com/nih-ncpi, Meen Chul Kim: meenchul@d3b.center

    topic: Research (umls#C0035168)

    code: Demographic data (Dataset CodeSystem (lists all tables)#demographics)

    observationResultRequirement:

    " - }, - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1", - "version": "0.2.0", - "status": "active", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "topic": [ - { - "coding": [ - { - "system": "https://uts.nlm.nih.gov/uts/umls", - "code": "C0035168", - "display": "Research" - } - ] - } - ], - "code": { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1", - "code": "demographics", - "display": "Demographic data" - } - ] - }, - "observationResultRequirement": [ - { - "reference": "ObservationDefinition/example-study-data-dictionary-variable-1-1" - }, - { - "reference": "ObservationDefinition/example-study-data-dictionary-variable-1-2" - }, - { - "reference": "ObservationDefinition/example-study-data-dictionary-variable-1-3" - }, - { - "reference": "ObservationDefinition/example-study-data-dictionary-variable-1-4" - } - ] +{ + "resourceType" : "ActivityDefinition", + "id" : "example-study-data-dictionary-table-1", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-table"] + }, + "text" : { + "status" : "generated", + "div" : "

    Generated Narrative: ActivityDefinition

    Resource ActivityDefinition "example-study-data-dictionary-table-1"

    Profile: NCPI Study Data Dictionary Data Table

    url: https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1

    version: 0.2.0

    status: active

    date: 2022-12-09 17:30:30+0000

    publisher: NCPI FHIR Working Group

    contact: NCPI FHIR Working Group: https://github.com/nih-ncpi, Meen Chul Kim: meenchul@d3b.center

    topic: Research (umls#C0035168)

    code: Demographic data (Dataset CodeSystem (lists all tables)#demographics)

    observationResultRequirement:

    " + }, + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1", + "version" : "0.2.0", + "status" : "active", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "topic" : [{ + "coding" : [{ + "system" : "https://uts.nlm.nih.gov/uts/umls", + "code" : "C0035168", + "display" : "Research" + }] + }], + "code" : { + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1", + "code" : "demographics", + "display" : "Demographic data" + }] + }, + "observationResultRequirement" : [{ + "reference" : "ObservationDefinition/example-study-data-dictionary-variable-1-1" + }, + { + "reference" : "ObservationDefinition/example-study-data-dictionary-variable-1-2" + }, + { + "reference" : "ObservationDefinition/example-study-data-dictionary-variable-1-3" + }, + { + "reference" : "ObservationDefinition/example-study-data-dictionary-variable-1-4" + }] } \ No newline at end of file diff --git a/ActivityDefinition-example-study-data-dictionary-table-1.json.html b/ActivityDefinition-example-study-data-dictionary-table-1.json.html index 0bff53b4..2dc67476 100644 --- a/ActivityDefinition-example-study-data-dictionary-table-1.json.html +++ b/ActivityDefinition-example-study-data-dictionary-table-1.json.html @@ -152,7 +152,7 @@ Childhood Cancer
  • - Using "Source" Data + Using "Source" Data
  • EHR Data @@ -268,7 +268,7 @@

    : Data-Dictionary Table - JSON Representation

    Active - as of 2022-11-28 + as of 2022-12-09 @@ -295,12 +295,12 @@

    : Data-Dictionary Table - JSON Representation

    }, "text" : { "status" : "generated", - "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ActivityDefinition</b><a name=\"example-study-data-dictionary-table-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ActivityDefinition &quot;example-study-data-dictionary-table-1&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-table.html\">NCPI Study Data Dictionary Data Table</a></p></div><p><b>url</b>: <code>https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1</code></p><p><b>version</b>: 0.2.0</p><p><b>status</b>: active</p><p><b>date</b>: 2022-11-28 09:07:57+0000</p><p><b>publisher</b>: NCPI FHIR Working Group</p><p><b>contact</b>: NCPI FHIR Working Group: <a href=\"https://github.com/nih-ncpi\">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href=\"mailto:meenchul@d3b.center\">meenchul@d3b.center</a></p><p><b>topic</b>: Research <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C0035168)</span></p><p><b>code</b>: Demographic data <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-dataset-codesystem-1.html\">Dataset CodeSystem (lists all tables)</a>#demographics)</span></p><p><b>observationResultRequirement</b>: </p><ul><li><a href=\"ObservationDefinition-example-study-data-dictionary-variable-1-1.html\">ObservationDefinition/example-study-data-dictionary-variable-1-1</a></li><li><a href=\"ObservationDefinition-example-study-data-dictionary-variable-1-2.html\">ObservationDefinition/example-study-data-dictionary-variable-1-2</a></li><li><a href=\"ObservationDefinition-example-study-data-dictionary-variable-1-3.html\">ObservationDefinition/example-study-data-dictionary-variable-1-3</a></li><li><a href=\"ObservationDefinition-example-study-data-dictionary-variable-1-4.html\">ObservationDefinition/example-study-data-dictionary-variable-1-4</a></li></ul></div>" + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ActivityDefinition</b><a name=\"example-study-data-dictionary-table-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ActivityDefinition &quot;example-study-data-dictionary-table-1&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-table.html\">NCPI Study Data Dictionary Data Table</a></p></div><p><b>url</b>: <code>https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1</code></p><p><b>version</b>: 0.2.0</p><p><b>status</b>: active</p><p><b>date</b>: 2022-12-09 17:30:30+0000</p><p><b>publisher</b>: NCPI FHIR Working Group</p><p><b>contact</b>: NCPI FHIR Working Group: <a href=\"https://github.com/nih-ncpi\">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href=\"mailto:meenchul@d3b.center\">meenchul@d3b.center</a></p><p><b>topic</b>: Research <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C0035168)</span></p><p><b>code</b>: Demographic data <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-dataset-codesystem-1.html\">Dataset CodeSystem (lists all tables)</a>#demographics)</span></p><p><b>observationResultRequirement</b>: </p><ul><li><a href=\"ObservationDefinition-example-study-data-dictionary-variable-1-1.html\">ObservationDefinition/example-study-data-dictionary-variable-1-1</a></li><li><a href=\"ObservationDefinition-example-study-data-dictionary-variable-1-2.html\">ObservationDefinition/example-study-data-dictionary-variable-1-2</a></li><li><a href=\"ObservationDefinition-example-study-data-dictionary-variable-1-3.html\">ObservationDefinition/example-study-data-dictionary-variable-1-3</a></li><li><a href=\"ObservationDefinition-example-study-data-dictionary-variable-1-4.html\">ObservationDefinition/example-study-data-dictionary-variable-1-4</a></li></ul></div>" }, "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1", "version" : "0.2.0", "status" : "active", - "date" : "2022-11-28T21:07:57+00:00", + "date" : "2022-12-09T17:30:30+00:00", "publisher" : "NCPI FHIR Working Group", "contact" : [ { @@ -387,7 +387,7 @@

    : Data-Dictionary Table - JSON Representation

    - IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-11-28 + IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-12-09
    Links: Table of Contents | diff --git a/ActivityDefinition-example-study-data-dictionary-table-1.ttl b/ActivityDefinition-example-study-data-dictionary-table-1.ttl index 543fc867..7f818d43 100644 --- a/ActivityDefinition-example-study-data-dictionary-table-1.ttl +++ b/ActivityDefinition-example-study-data-dictionary-table-1.ttl @@ -7,23 +7,23 @@ a fhir:ActivityDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "example-study-data-dictionary-table-1"]; + fhir:Resource.id [ fhir:value "example-study-data-dictionary-table-1"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-table"; fhir:index 0; fhir:link ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; - fhir:Narrative.div "

    Generated Narrative: ActivityDefinition

    Resource ActivityDefinition "example-study-data-dictionary-table-1"

    Profile: NCPI Study Data Dictionary Data Table

    url: https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1

    version: 0.2.0

    status: active

    date: 2022-11-28 09:07:57+0000

    publisher: NCPI FHIR Working Group

    contact: NCPI FHIR Working Group: https://github.com/nih-ncpi, Meen Chul Kim: meenchul@d3b.center

    topic: Research (umls#C0035168)

    code: Demographic data (Dataset CodeSystem (lists all tables)#demographics)

    observationResultRequirement:

    " - ]; - fhir:ActivityDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1"]; - fhir:ActivityDefinition.version [ fhir:value "0.2.0"]; - fhir:ActivityDefinition.status [ fhir:value "active"]; - fhir:ActivityDefinition.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:ActivityDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; + fhir:Narrative.div "

    Generated Narrative: ActivityDefinition

    Resource ActivityDefinition "example-study-data-dictionary-table-1"

    Profile: NCPI Study Data Dictionary Data Table

    url: https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1

    version: 0.2.0

    status: active

    date: 2022-12-09 17:30:30+0000

    publisher: NCPI FHIR Working Group

    contact: NCPI FHIR Working Group: https://github.com/nih-ncpi, Meen Chul Kim: meenchul@d3b.center

    topic: Research (umls#C0035168)

    code: Demographic data (Dataset CodeSystem (lists all tables)#demographics)

    observationResultRequirement:

    " + ]; # + fhir:ActivityDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1"]; # + fhir:ActivityDefinition.version [ fhir:value "0.2.0"]; # + fhir:ActivityDefinition.status [ fhir:value "active"]; # + fhir:ActivityDefinition.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:ActivityDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:ActivityDefinition.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -41,7 +41,7 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; + ]; # fhir:ActivityDefinition.topic [ fhir:index 0; fhir:CodeableConcept.coding [ @@ -50,7 +50,7 @@ fhir:Coding.code [ fhir:value "C0035168" ]; fhir:Coding.display [ fhir:value "Research" ] ] - ]; + ]; # fhir:ActivityDefinition.code [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -58,7 +58,7 @@ fhir:Coding.code [ fhir:value "demographics" ]; fhir:Coding.display [ fhir:value "Demographic data" ] ] - ]; + ]; # fhir:ActivityDefinition.observationResultRequirement [ fhir:index 0; fhir:link ; @@ -75,7 +75,7 @@ fhir:index 3; fhir:link ; fhir:Reference.reference [ fhir:value "ObservationDefinition/example-study-data-dictionary-variable-1-4" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ActivityDefinition-example-study-data-dictionary-table-1.ttl.html b/ActivityDefinition-example-study-data-dictionary-table-1.ttl.html index d866fa08..3b548eca 100644 --- a/ActivityDefinition-example-study-data-dictionary-table-1.ttl.html +++ b/ActivityDefinition-example-study-data-dictionary-table-1.ttl.html @@ -152,7 +152,7 @@ Childhood Cancer
  • - Using "Source" Data + Using "Source" Data
  • EHR Data @@ -268,7 +268,7 @@

    : Data-Dictionary Table - TTL Representation

    Active - as of 2022-11-28 + as of 2022-12-09 @@ -294,22 +294,22 @@

    : Data-Dictionary Table - TTL Representation

    a fhir:ActivityDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "example-study-data-dictionary-table-1"]; + fhir:Resource.id [ fhir:value "example-study-data-dictionary-table-1"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-table"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-table> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; - fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ActivityDefinition</b><a name=\"example-study-data-dictionary-table-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ActivityDefinition &quot;example-study-data-dictionary-table-1&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-table.html\">NCPI Study Data Dictionary Data Table</a></p></div><p><b>url</b>: <code>https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1</code></p><p><b>version</b>: 0.2.0</p><p><b>status</b>: active</p><p><b>date</b>: 2022-11-28 09:07:57+0000</p><p><b>publisher</b>: NCPI FHIR Working Group</p><p><b>contact</b>: NCPI FHIR Working Group: <a href=\"https://github.com/nih-ncpi\">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href=\"mailto:meenchul@d3b.center\">meenchul@d3b.center</a></p><p><b>topic</b>: Research <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C0035168)</span></p><p><b>code</b>: Demographic data <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-dataset-codesystem-1.html\">Dataset CodeSystem (lists all tables)</a>#demographics)</span></p><p><b>observationResultRequirement</b>: </p><ul><li><a href=\"ObservationDefinition-example-study-data-dictionary-variable-1-1.html\">ObservationDefinition/example-study-data-dictionary-variable-1-1</a></li><li><a href=\"ObservationDefinition-example-study-data-dictionary-variable-1-2.html\">ObservationDefinition/example-study-data-dictionary-variable-1-2</a></li><li><a href=\"ObservationDefinition-example-study-data-dictionary-variable-1-3.html\">ObservationDefinition/example-study-data-dictionary-variable-1-3</a></li><li><a href=\"ObservationDefinition-example-study-data-dictionary-variable-1-4.html\">ObservationDefinition/example-study-data-dictionary-variable-1-4</a></li></ul></div>" - ]; - fhir:ActivityDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1"]; - fhir:ActivityDefinition.version [ fhir:value "0.2.0"]; - fhir:ActivityDefinition.status [ fhir:value "active"]; - fhir:ActivityDefinition.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:ActivityDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; + fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ActivityDefinition</b><a name=\"example-study-data-dictionary-table-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ActivityDefinition &quot;example-study-data-dictionary-table-1&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-table.html\">NCPI Study Data Dictionary Data Table</a></p></div><p><b>url</b>: <code>https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1</code></p><p><b>version</b>: 0.2.0</p><p><b>status</b>: active</p><p><b>date</b>: 2022-12-09 17:30:30+0000</p><p><b>publisher</b>: NCPI FHIR Working Group</p><p><b>contact</b>: NCPI FHIR Working Group: <a href=\"https://github.com/nih-ncpi\">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href=\"mailto:meenchul@d3b.center\">meenchul@d3b.center</a></p><p><b>topic</b>: Research <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C0035168)</span></p><p><b>code</b>: Demographic data <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-dataset-codesystem-1.html\">Dataset CodeSystem (lists all tables)</a>#demographics)</span></p><p><b>observationResultRequirement</b>: </p><ul><li><a href=\"ObservationDefinition-example-study-data-dictionary-variable-1-1.html\">ObservationDefinition/example-study-data-dictionary-variable-1-1</a></li><li><a href=\"ObservationDefinition-example-study-data-dictionary-variable-1-2.html\">ObservationDefinition/example-study-data-dictionary-variable-1-2</a></li><li><a href=\"ObservationDefinition-example-study-data-dictionary-variable-1-3.html\">ObservationDefinition/example-study-data-dictionary-variable-1-3</a></li><li><a href=\"ObservationDefinition-example-study-data-dictionary-variable-1-4.html\">ObservationDefinition/example-study-data-dictionary-variable-1-4</a></li></ul></div>" + ]; # + fhir:ActivityDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1"]; # + fhir:ActivityDefinition.version [ fhir:value "0.2.0"]; # + fhir:ActivityDefinition.status [ fhir:value "active"]; # + fhir:ActivityDefinition.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:ActivityDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:ActivityDefinition.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -325,7 +325,7 @@

    : Data-Dictionary Table - TTL Representation

    fhir:ContactPoint.system [ fhir:value "email" ]; fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; + ]; # fhir:ActivityDefinition.topic [ fhir:index 0; fhir:CodeableConcept.coding [ @@ -333,14 +333,14 @@

    : Data-Dictionary Table - TTL Representation

    fhir:Coding.system [ fhir:value "https://uts.nlm.nih.gov/uts/umls" ]; fhir:Coding.code [ fhir:value "C0035168" ]; fhir:Coding.display [ fhir:value "Research" ] ] - ]; + ]; # fhir:ActivityDefinition.code [ fhir:CodeableConcept.coding [ fhir:index 0; fhir:Coding.system [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1" ]; fhir:Coding.code [ fhir:value "demographics" ]; fhir:Coding.display [ fhir:value "Demographic data" ] ] - ]; + ]; # fhir:ActivityDefinition.observationResultRequirement [ fhir:index 0; fhir:Reference.reference [ fhir:value "ObservationDefinition/example-study-data-dictionary-variable-1-1" ] @@ -353,7 +353,7 @@

    : Data-Dictionary Table - TTL Representation

    ], [ fhir:index 3; fhir:Reference.reference [ fhir:value "ObservationDefinition/example-study-data-dictionary-variable-1-4" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -391,7 +391,7 @@

    : Data-Dictionary Table - TTL Representation

    - IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-11-28 + IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-12-09
    Links: Table of Contents | diff --git a/ActivityDefinition-example-study-data-dictionary-table-1.xml b/ActivityDefinition-example-study-data-dictionary-table-1.xml index 58b6e40a..5134b3e2 100644 --- a/ActivityDefinition-example-study-data-dictionary-table-1.xml +++ b/ActivityDefinition-example-study-data-dictionary-table-1.xml @@ -6,12 +6,12 @@ -

    Generated Narrative: ActivityDefinition

    Resource ActivityDefinition "example-study-data-dictionary-table-1"

    Profile: NCPI Study Data Dictionary Data Table

    url: https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1

    version: 0.2.0

    status: active

    date: 2022-11-28 09:07:57+0000

    publisher: NCPI FHIR Working Group

    contact: NCPI FHIR Working Group: https://github.com/nih-ncpi, Meen Chul Kim: meenchul@d3b.center

    topic: Research (umls#C0035168)

    code: Demographic data (Dataset CodeSystem (lists all tables)#demographics)

    observationResultRequirement:

    +

    Generated Narrative: ActivityDefinition

    Resource ActivityDefinition "example-study-data-dictionary-table-1"

    Profile: NCPI Study Data Dictionary Data Table

    url: https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1

    version: 0.2.0

    status: active

    date: 2022-12-09 17:30:30+0000

    publisher: NCPI FHIR Working Group

    contact: NCPI FHIR Working Group: https://github.com/nih-ncpi, Meen Chul Kim: meenchul@d3b.center

    topic: Research (umls#C0035168)

    code: Demographic data (Dataset CodeSystem (lists all tables)#demographics)

    observationResultRequirement:

    - + diff --git a/ActivityDefinition-example-study-data-dictionary-table-1.xml.html b/ActivityDefinition-example-study-data-dictionary-table-1.xml.html index 1217639e..08167fa8 100644 --- a/ActivityDefinition-example-study-data-dictionary-table-1.xml.html +++ b/ActivityDefinition-example-study-data-dictionary-table-1.xml.html @@ -152,7 +152,7 @@ Childhood Cancer
  • - Using "Source" Data + Using "Source" Data
  • EHR Data @@ -268,7 +268,7 @@

    : Data-Dictionary Table - XML Representation

    Active - as of 2022-11-28 + as of 2022-12-09 @@ -294,13 +294,13 @@

    : Data-Dictionary Table - XML Representation

    </meta> <text> <status value="generated"/> - <div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative: ActivityDefinition</b><a name="example-study-data-dictionary-table-1"> </a></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource ActivityDefinition &quot;example-study-data-dictionary-table-1&quot; </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-study-data-dictionary-table.html">NCPI Study Data Dictionary Data Table</a></p></div><p><b>url</b>: <code>https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1</code></p><p><b>version</b>: 0.2.0</p><p><b>status</b>: active</p><p><b>date</b>: 2022-11-28 09:07:57+0000</p><p><b>publisher</b>: NCPI FHIR Working Group</p><p><b>contact</b>: NCPI FHIR Working Group: <a href="https://github.com/nih-ncpi">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href="mailto:meenchul@d3b.center">meenchul@d3b.center</a></p><p><b>topic</b>: Research <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (umls#C0035168)</span></p><p><b>code</b>: Demographic data <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="CodeSystem-example-study-data-dictionary-dataset-codesystem-1.html">Dataset CodeSystem (lists all tables)</a>#demographics)</span></p><p><b>observationResultRequirement</b>: </p><ul><li><a href="ObservationDefinition-example-study-data-dictionary-variable-1-1.html">ObservationDefinition/example-study-data-dictionary-variable-1-1</a></li><li><a href="ObservationDefinition-example-study-data-dictionary-variable-1-2.html">ObservationDefinition/example-study-data-dictionary-variable-1-2</a></li><li><a href="ObservationDefinition-example-study-data-dictionary-variable-1-3.html">ObservationDefinition/example-study-data-dictionary-variable-1-3</a></li><li><a href="ObservationDefinition-example-study-data-dictionary-variable-1-4.html">ObservationDefinition/example-study-data-dictionary-variable-1-4</a></li></ul></div> + <div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative: ActivityDefinition</b><a name="example-study-data-dictionary-table-1"> </a></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource ActivityDefinition &quot;example-study-data-dictionary-table-1&quot; </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-study-data-dictionary-table.html">NCPI Study Data Dictionary Data Table</a></p></div><p><b>url</b>: <code>https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1</code></p><p><b>version</b>: 0.2.0</p><p><b>status</b>: active</p><p><b>date</b>: 2022-12-09 17:30:30+0000</p><p><b>publisher</b>: NCPI FHIR Working Group</p><p><b>contact</b>: NCPI FHIR Working Group: <a href="https://github.com/nih-ncpi">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href="mailto:meenchul@d3b.center">meenchul@d3b.center</a></p><p><b>topic</b>: Research <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (umls#C0035168)</span></p><p><b>code</b>: Demographic data <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="CodeSystem-example-study-data-dictionary-dataset-codesystem-1.html">Dataset CodeSystem (lists all tables)</a>#demographics)</span></p><p><b>observationResultRequirement</b>: </p><ul><li><a href="ObservationDefinition-example-study-data-dictionary-variable-1-1.html">ObservationDefinition/example-study-data-dictionary-variable-1-1</a></li><li><a href="ObservationDefinition-example-study-data-dictionary-variable-1-2.html">ObservationDefinition/example-study-data-dictionary-variable-1-2</a></li><li><a href="ObservationDefinition-example-study-data-dictionary-variable-1-3.html">ObservationDefinition/example-study-data-dictionary-variable-1-3</a></li><li><a href="ObservationDefinition-example-study-data-dictionary-variable-1-4.html">ObservationDefinition/example-study-data-dictionary-variable-1-4</a></li></ul></div> </text> <url value="https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1"/> <version value="0.2.0"/> <status value="active"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> @@ -378,7 +378,7 @@

    : Data-Dictionary Table - XML Representation

    - IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-11-28 + IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-12-09
    Links: Table of Contents | diff --git a/CodeSystem-ConditionInheritanceMode-testing.html b/CodeSystem-ConditionInheritanceMode-testing.html index 1ca0a9c4..aff16bfb 100644 --- a/CodeSystem-ConditionInheritanceMode-testing.html +++ b/CodeSystem-ConditionInheritanceMode-testing.html @@ -150,7 +150,7 @@ Childhood Cancer

  • - Using "Source" Data + Using "Source" Data
  • EHR Data @@ -266,7 +266,7 @@

    CodeSystem: Condition Inheritance Pattern - Testing Active - as of 2022-11-28 + as of 2022-12-09 @@ -309,7 +309,7 @@

    CodeSystem: Condition Inheritance Pattern - Testing

    - IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-11-28 + IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-12-09
    Links: Table of Contents | diff --git a/CodeSystem-ConditionInheritanceMode.change.history.html b/CodeSystem-ConditionInheritanceMode.change.history.html index 2226fe97..9a5c8c69 100644 --- a/CodeSystem-ConditionInheritanceMode.change.history.html +++ b/CodeSystem-ConditionInheritanceMode.change.history.html @@ -154,7 +154,7 @@ Childhood Cancer

  • - Using "Source" Data + Using "Source" Data
  • EHR Data @@ -312,7 +312,7 @@

    : ConditionInheritanceMode - Change History

    - IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-11-28 + IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-12-09
    Links: Table of Contents | diff --git a/CodeSystem-ConditionInheritanceMode.html b/CodeSystem-ConditionInheritanceMode.html index 12dc7a3e..eb948141 100644 --- a/CodeSystem-ConditionInheritanceMode.html +++ b/CodeSystem-ConditionInheritanceMode.html @@ -150,7 +150,7 @@ Childhood Cancer

  • - Using "Source" Data + Using "Source" Data
  • EHR Data @@ -281,7 +281,7 @@

    CodeSystem: Condition Inheritance Pattern Active - as of 2022-11-28 + as of 2022-12-09 @@ -353,7 +353,7 @@

    CodeSystem: Condition Inheritance Pattern

    - IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-11-28 + IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-12-09
    Links: Table of Contents | diff --git a/CodeSystem-ConditionInheritanceMode.json b/CodeSystem-ConditionInheritanceMode.json index 14db38a3..c83154ae 100644 --- a/CodeSystem-ConditionInheritanceMode.json +++ b/CodeSystem-ConditionInheritanceMode.json @@ -1,151 +1,139 @@ -{ - "resourceType": "CodeSystem", - "id": "ConditionInheritanceMode", - "text": { - "status": "generated", - "div": "

    This code system https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode defines the following codes:

    CodeDisplay
    GENO:0000143 Codominant inheritance
    GENO:0000889 Unknown inheritance
    GENO:0000892 Mitochondrial inheritance (primarily or exclusively heteroplasmic)
    GENO:0000893 Mitochondrial inheritance (primarily or exclusively homoplasmic)
    HP:0000006 Autosomal dominant inheritance
    HP:0000007 Autosomal recessive inheritance
    HP:0001417 X-linked inheritance
    HP:0001419 X-linked inheritance (recessive)
    HP:0001423 X-linked inheritance (dominant)
    HP:0001426 Multifactorial inheritance
    HP:0001427 Mitochondrial inheritance
    HP:0001428 Somatic mutation
    HP:0001450 Y-linked inheritance
    HP:0001470 Autosomal dominant inheritance (sex-limited)
    HP:0003743 Genetic anticipation
    HP:0003745 Sporadic
    HP:0010983 Oligogenic
    HP:0012274 Autosomal dominant inheritance (with paternal imprinting)
    HP:0012275 Autosomal dominant inheritance (with maternal imprinting)
    HP:0025352 Autosomal dominant inheritance (primarily or exclusively de novo)
    HP:0031362 Autosomal recessive inheritance (sex-limited)
    SEPIO-CG:97020 Semidominant inheritance
    SEPIO-CG:97021 X-linked inheritance (primarily recessive with milder female expression)
    SEPIO-CG:97022 Autosomal dominant inheritance (with genetic anticipation)
    SEPIO-CG:97023 Autosomal recessive inheritance (with genetic anticipation)
    " - }, - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode", - "version": "0.2.0", - "name": "ConditionInheritanceMode", - "title": "Condition Inheritance Pattern", - "status": "active", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "A set of terms that describe the transmission pattern of a condition in a pedigree.", - "jurisdiction": [ - { - "coding": [ - { - "system": "http://unstats.un.org/unsd/methods/m49/m49.htm", - "code": "001" - } - ] - } - ], - "content": "complete", - "count": 25, - "concept": [ - { - "code": "GENO:0000143", - "display": "Codominant inheritance" - }, - { - "code": "GENO:0000889", - "display": "Unknown inheritance" - }, - { - "code": "GENO:0000892", - "display": "Mitochondrial inheritance (primarily or exclusively heteroplasmic)" - }, - { - "code": "GENO:0000893", - "display": "Mitochondrial inheritance (primarily or exclusively homoplasmic)" - }, - { - "code": "HP:0000006", - "display": "Autosomal dominant inheritance" - }, - { - "code": "HP:0000007", - "display": "Autosomal recessive inheritance" - }, - { - "code": "HP:0001417", - "display": "X-linked inheritance" - }, - { - "code": "HP:0001419", - "display": "X-linked inheritance (recessive)" - }, - { - "code": "HP:0001423", - "display": "X-linked inheritance (dominant)" - }, - { - "code": "HP:0001426", - "display": "Multifactorial inheritance" - }, - { - "code": "HP:0001427", - "display": "Mitochondrial inheritance" - }, - { - "code": "HP:0001428", - "display": "Somatic mutation" - }, - { - "code": "HP:0001450", - "display": "Y-linked inheritance" - }, - { - "code": "HP:0001470", - "display": "Autosomal dominant inheritance (sex-limited)" - }, - { - "code": "HP:0003743", - "display": "Genetic anticipation" - }, - { - "code": "HP:0003745", - "display": "Sporadic" - }, - { - "code": "HP:0010983", - "display": "Oligogenic" - }, - { - "code": "HP:0012274", - "display": "Autosomal dominant inheritance (with paternal imprinting)" - }, - { - "code": "HP:0012275", - "display": "Autosomal dominant inheritance (with maternal imprinting)" - }, - { - "code": "HP:0025352", - "display": "Autosomal dominant inheritance (primarily or exclusively de novo)" - }, - { - "code": "HP:0031362", - "display": "Autosomal recessive inheritance (sex-limited)" - }, - { - "code": "SEPIO-CG:97020", - "display": "Semidominant inheritance" - }, - { - "code": "SEPIO-CG:97021", - "display": "X-linked inheritance (primarily recessive with milder female expression)" - }, - { - "code": "SEPIO-CG:97022", - "display": "Autosomal dominant inheritance (with genetic anticipation)" - }, - { - "code": "SEPIO-CG:97023", - "display": "Autosomal recessive inheritance (with genetic anticipation)" - } - ] +{ + "resourceType" : "CodeSystem", + "id" : "ConditionInheritanceMode", + "text" : { + "status" : "generated", + "div" : "

    This code system https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode defines the following codes:

    CodeDisplay
    GENO:0000143 Codominant inheritance
    GENO:0000889 Unknown inheritance
    GENO:0000892 Mitochondrial inheritance (primarily or exclusively heteroplasmic)
    GENO:0000893 Mitochondrial inheritance (primarily or exclusively homoplasmic)
    HP:0000006 Autosomal dominant inheritance
    HP:0000007 Autosomal recessive inheritance
    HP:0001417 X-linked inheritance
    HP:0001419 X-linked inheritance (recessive)
    HP:0001423 X-linked inheritance (dominant)
    HP:0001426 Multifactorial inheritance
    HP:0001427 Mitochondrial inheritance
    HP:0001428 Somatic mutation
    HP:0001450 Y-linked inheritance
    HP:0001470 Autosomal dominant inheritance (sex-limited)
    HP:0003743 Genetic anticipation
    HP:0003745 Sporadic
    HP:0010983 Oligogenic
    HP:0012274 Autosomal dominant inheritance (with paternal imprinting)
    HP:0012275 Autosomal dominant inheritance (with maternal imprinting)
    HP:0025352 Autosomal dominant inheritance (primarily or exclusively de novo)
    HP:0031362 Autosomal recessive inheritance (sex-limited)
    SEPIO-CG:97020 Semidominant inheritance
    SEPIO-CG:97021 X-linked inheritance (primarily recessive with milder female expression)
    SEPIO-CG:97022 Autosomal dominant inheritance (with genetic anticipation)
    SEPIO-CG:97023 Autosomal recessive inheritance (with genetic anticipation)
    " + }, + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode", + "version" : "0.2.0", + "name" : "ConditionInheritanceMode", + "title" : "Condition Inheritance Pattern", + "status" : "active", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "A set of terms that describe the transmission pattern of a condition in a pedigree.", + "jurisdiction" : [{ + "coding" : [{ + "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm", + "code" : "001" + }] + }], + "content" : "complete", + "count" : 25, + "concept" : [{ + "code" : "GENO:0000143", + "display" : "Codominant inheritance" + }, + { + "code" : "GENO:0000889", + "display" : "Unknown inheritance" + }, + { + "code" : "GENO:0000892", + "display" : "Mitochondrial inheritance (primarily or exclusively heteroplasmic)" + }, + { + "code" : "GENO:0000893", + "display" : "Mitochondrial inheritance (primarily or exclusively homoplasmic)" + }, + { + "code" : "HP:0000006", + "display" : "Autosomal dominant inheritance" + }, + { + "code" : "HP:0000007", + "display" : "Autosomal recessive inheritance" + }, + { + "code" : "HP:0001417", + "display" : "X-linked inheritance" + }, + { + "code" : "HP:0001419", + "display" : "X-linked inheritance (recessive)" + }, + { + "code" : "HP:0001423", + "display" : "X-linked inheritance (dominant)" + }, + { + "code" : "HP:0001426", + "display" : "Multifactorial inheritance" + }, + { + "code" : "HP:0001427", + "display" : "Mitochondrial inheritance" + }, + { + "code" : "HP:0001428", + "display" : "Somatic mutation" + }, + { + "code" : "HP:0001450", + "display" : "Y-linked inheritance" + }, + { + "code" : "HP:0001470", + "display" : "Autosomal dominant inheritance (sex-limited)" + }, + { + "code" : "HP:0003743", + "display" : "Genetic anticipation" + }, + { + "code" : "HP:0003745", + "display" : "Sporadic" + }, + { + "code" : "HP:0010983", + "display" : "Oligogenic" + }, + { + "code" : "HP:0012274", + "display" : "Autosomal dominant inheritance (with paternal imprinting)" + }, + { + "code" : "HP:0012275", + "display" : "Autosomal dominant inheritance (with maternal imprinting)" + }, + { + "code" : "HP:0025352", + "display" : "Autosomal dominant inheritance (primarily or exclusively de novo)" + }, + { + "code" : "HP:0031362", + "display" : "Autosomal recessive inheritance (sex-limited)" + }, + { + "code" : "SEPIO-CG:97020", + "display" : "Semidominant inheritance" + }, + { + "code" : "SEPIO-CG:97021", + "display" : "X-linked inheritance (primarily recessive with milder female expression)" + }, + { + "code" : "SEPIO-CG:97022", + "display" : "Autosomal dominant inheritance (with genetic anticipation)" + }, + { + "code" : "SEPIO-CG:97023", + "display" : "Autosomal recessive inheritance (with genetic anticipation)" + }] } \ No newline at end of file diff --git a/CodeSystem-ConditionInheritanceMode.json.html b/CodeSystem-ConditionInheritanceMode.json.html index 3199bad6..ab6c4bed 100644 --- a/CodeSystem-ConditionInheritanceMode.json.html +++ b/CodeSystem-ConditionInheritanceMode.json.html @@ -152,7 +152,7 @@ Childhood Cancer

  • - Using "Source" Data + Using "Source" Data
  • EHR Data @@ -268,7 +268,7 @@

    : Condition Inheritance Pattern - JSON Representation

    Active - as of 2022-11-28 + as of 2022-12-09 @@ -297,7 +297,7 @@

    : Condition Inheritance Pattern - JSON Representation

    "name" : "ConditionInheritanceMode", "title" : "Condition Inheritance Pattern", "status" : "active", - "date" : "2022-11-28T21:07:57+00:00", + "date" : "2022-12-09T17:30:30+00:00", "publisher" : "NCPI FHIR Working Group", "contact" : [ { @@ -465,7 +465,7 @@

    : Condition Inheritance Pattern - JSON Representation

    - IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-11-28 + IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-12-09
    Links: Table of Contents | diff --git a/CodeSystem-ConditionInheritanceMode.ttl b/CodeSystem-ConditionInheritanceMode.ttl index 14f792c6..4ce59608 100644 --- a/CodeSystem-ConditionInheritanceMode.ttl +++ b/CodeSystem-ConditionInheritanceMode.ttl @@ -7,18 +7,18 @@ a fhir:CodeSystem; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "ConditionInheritanceMode"]; + fhir:Resource.id [ fhir:value "ConditionInheritanceMode"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "

    This code system https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode defines the following codes:

    CodeDisplay
    GENO:0000143 Codominant inheritance
    GENO:0000889 Unknown inheritance
    GENO:0000892 Mitochondrial inheritance (primarily or exclusively heteroplasmic)
    GENO:0000893 Mitochondrial inheritance (primarily or exclusively homoplasmic)
    HP:0000006 Autosomal dominant inheritance
    HP:0000007 Autosomal recessive inheritance
    HP:0001417 X-linked inheritance
    HP:0001419 X-linked inheritance (recessive)
    HP:0001423 X-linked inheritance (dominant)
    HP:0001426 Multifactorial inheritance
    HP:0001427 Mitochondrial inheritance
    HP:0001428 Somatic mutation
    HP:0001450 Y-linked inheritance
    HP:0001470 Autosomal dominant inheritance (sex-limited)
    HP:0003743 Genetic anticipation
    HP:0003745 Sporadic
    HP:0010983 Oligogenic
    HP:0012274 Autosomal dominant inheritance (with paternal imprinting)
    HP:0012275 Autosomal dominant inheritance (with maternal imprinting)
    HP:0025352 Autosomal dominant inheritance (primarily or exclusively de novo)
    HP:0031362 Autosomal recessive inheritance (sex-limited)
    SEPIO-CG:97020 Semidominant inheritance
    SEPIO-CG:97021 X-linked inheritance (primarily recessive with milder female expression)
    SEPIO-CG:97022 Autosomal dominant inheritance (with genetic anticipation)
    SEPIO-CG:97023 Autosomal recessive inheritance (with genetic anticipation)
    " - ]; - fhir:CodeSystem.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode"]; - fhir:CodeSystem.version [ fhir:value "0.2.0"]; - fhir:CodeSystem.name [ fhir:value "ConditionInheritanceMode"]; - fhir:CodeSystem.title [ fhir:value "Condition Inheritance Pattern"]; - fhir:CodeSystem.status [ fhir:value "active"]; - fhir:CodeSystem.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:CodeSystem.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode"]; # + fhir:CodeSystem.version [ fhir:value "0.2.0"]; # + fhir:CodeSystem.name [ fhir:value "ConditionInheritanceMode"]; # + fhir:CodeSystem.title [ fhir:value "Condition Inheritance Pattern"]; # + fhir:CodeSystem.status [ fhir:value "active"]; # + fhir:CodeSystem.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:CodeSystem.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -36,8 +36,8 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:CodeSystem.description [ fhir:value "A set of terms that describe the transmission pattern of a condition in a pedigree."]; + ]; # + fhir:CodeSystem.description [ fhir:value "A set of terms that describe the transmission pattern of a condition in a pedigree."]; # fhir:CodeSystem.jurisdiction [ fhir:index 0; fhir:CodeableConcept.coding [ @@ -45,9 +45,9 @@ fhir:Coding.system [ fhir:value "http://unstats.un.org/unsd/methods/m49/m49.htm" ]; fhir:Coding.code [ fhir:value "001" ] ] - ]; - fhir:CodeSystem.content [ fhir:value "complete"]; - fhir:CodeSystem.count [ fhir:value "25"^^xsd:nonNegativeInteger]; + ]; # + fhir:CodeSystem.content [ fhir:value "complete"]; # + fhir:CodeSystem.count [ fhir:value "25"^^xsd:nonNegativeInteger]; # fhir:CodeSystem.concept [ fhir:index 0; fhir:CodeSystem.concept.code [ fhir:value "GENO:0000143" ]; @@ -148,7 +148,7 @@ fhir:index 24; fhir:CodeSystem.concept.code [ fhir:value "SEPIO-CG:97023" ]; fhir:CodeSystem.concept.display [ fhir:value "Autosomal recessive inheritance (with genetic anticipation)" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/CodeSystem-ConditionInheritanceMode.ttl.html b/CodeSystem-ConditionInheritanceMode.ttl.html index 6c3d8db4..22652944 100644 --- a/CodeSystem-ConditionInheritanceMode.ttl.html +++ b/CodeSystem-ConditionInheritanceMode.ttl.html @@ -152,7 +152,7 @@ Childhood Cancer
  • - Using "Source" Data + Using "Source" Data
  • EHR Data @@ -268,7 +268,7 @@

    : Condition Inheritance Pattern - TTL Representation

    Active - as of 2022-11-28 + as of 2022-12-09 @@ -294,18 +294,18 @@

    : Condition Inheritance Pattern - TTL Representation

    a fhir:CodeSystem; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "ConditionInheritanceMode"]; + fhir:Resource.id [ fhir:value "ConditionInheritanceMode"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">GENO:0000143<a name=\"ConditionInheritanceMode-GENO.580000143\"> </a></td><td>Codominant inheritance</td></tr><tr><td style=\"white-space:nowrap\">GENO:0000889<a name=\"ConditionInheritanceMode-GENO.580000889\"> </a></td><td>Unknown inheritance</td></tr><tr><td style=\"white-space:nowrap\">GENO:0000892<a name=\"ConditionInheritanceMode-GENO.580000892\"> </a></td><td>Mitochondrial inheritance (primarily or exclusively heteroplasmic)</td></tr><tr><td style=\"white-space:nowrap\">GENO:0000893<a name=\"ConditionInheritanceMode-GENO.580000893\"> </a></td><td>Mitochondrial inheritance (primarily or exclusively homoplasmic)</td></tr><tr><td style=\"white-space:nowrap\">HP:0000006<a name=\"ConditionInheritanceMode-HP.580000006\"> </a></td><td>Autosomal dominant inheritance</td></tr><tr><td style=\"white-space:nowrap\">HP:0000007<a name=\"ConditionInheritanceMode-HP.580000007\"> </a></td><td>Autosomal recessive inheritance</td></tr><tr><td style=\"white-space:nowrap\">HP:0001417<a name=\"ConditionInheritanceMode-HP.580001417\"> </a></td><td>X-linked inheritance</td></tr><tr><td style=\"white-space:nowrap\">HP:0001419<a name=\"ConditionInheritanceMode-HP.580001419\"> </a></td><td>X-linked inheritance (recessive)</td></tr><tr><td style=\"white-space:nowrap\">HP:0001423<a name=\"ConditionInheritanceMode-HP.580001423\"> </a></td><td>X-linked inheritance (dominant)</td></tr><tr><td style=\"white-space:nowrap\">HP:0001426<a name=\"ConditionInheritanceMode-HP.580001426\"> </a></td><td>Multifactorial inheritance</td></tr><tr><td style=\"white-space:nowrap\">HP:0001427<a name=\"ConditionInheritanceMode-HP.580001427\"> </a></td><td>Mitochondrial inheritance</td></tr><tr><td style=\"white-space:nowrap\">HP:0001428<a name=\"ConditionInheritanceMode-HP.580001428\"> </a></td><td>Somatic mutation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001450<a name=\"ConditionInheritanceMode-HP.580001450\"> </a></td><td>Y-linked inheritance</td></tr><tr><td style=\"white-space:nowrap\">HP:0001470<a name=\"ConditionInheritanceMode-HP.580001470\"> </a></td><td>Autosomal dominant inheritance (sex-limited)</td></tr><tr><td style=\"white-space:nowrap\">HP:0003743<a name=\"ConditionInheritanceMode-HP.580003743\"> </a></td><td>Genetic anticipation</td></tr><tr><td style=\"white-space:nowrap\">HP:0003745<a name=\"ConditionInheritanceMode-HP.580003745\"> </a></td><td>Sporadic</td></tr><tr><td style=\"white-space:nowrap\">HP:0010983<a name=\"ConditionInheritanceMode-HP.580010983\"> </a></td><td>Oligogenic</td></tr><tr><td style=\"white-space:nowrap\">HP:0012274<a name=\"ConditionInheritanceMode-HP.580012274\"> </a></td><td>Autosomal dominant inheritance (with paternal imprinting)</td></tr><tr><td style=\"white-space:nowrap\">HP:0012275<a name=\"ConditionInheritanceMode-HP.580012275\"> </a></td><td>Autosomal dominant inheritance (with maternal imprinting)</td></tr><tr><td style=\"white-space:nowrap\">HP:0025352<a name=\"ConditionInheritanceMode-HP.580025352\"> </a></td><td>Autosomal dominant inheritance (primarily or exclusively de novo)</td></tr><tr><td style=\"white-space:nowrap\">HP:0031362<a name=\"ConditionInheritanceMode-HP.580031362\"> </a></td><td>Autosomal recessive inheritance (sex-limited)</td></tr><tr><td style=\"white-space:nowrap\">SEPIO-CG:97020<a name=\"ConditionInheritanceMode-SEPIO-CG.5897020\"> </a></td><td>Semidominant inheritance</td></tr><tr><td style=\"white-space:nowrap\">SEPIO-CG:97021<a name=\"ConditionInheritanceMode-SEPIO-CG.5897021\"> </a></td><td>X-linked inheritance (primarily recessive with milder female expression)</td></tr><tr><td style=\"white-space:nowrap\">SEPIO-CG:97022<a name=\"ConditionInheritanceMode-SEPIO-CG.5897022\"> </a></td><td>Autosomal dominant inheritance (with genetic anticipation)</td></tr><tr><td style=\"white-space:nowrap\">SEPIO-CG:97023<a name=\"ConditionInheritanceMode-SEPIO-CG.5897023\"> </a></td><td>Autosomal recessive inheritance (with genetic anticipation)</td></tr></table></div>" - ]; - fhir:CodeSystem.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode"]; - fhir:CodeSystem.version [ fhir:value "0.2.0"]; - fhir:CodeSystem.name [ fhir:value "ConditionInheritanceMode"]; - fhir:CodeSystem.title [ fhir:value "Condition Inheritance Pattern"]; - fhir:CodeSystem.status [ fhir:value "active"]; - fhir:CodeSystem.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:CodeSystem.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode"]; # + fhir:CodeSystem.version [ fhir:value "0.2.0"]; # + fhir:CodeSystem.name [ fhir:value "ConditionInheritanceMode"]; # + fhir:CodeSystem.title [ fhir:value "Condition Inheritance Pattern"]; # + fhir:CodeSystem.status [ fhir:value "active"]; # + fhir:CodeSystem.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:CodeSystem.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -321,17 +321,17 @@

    : Condition Inheritance Pattern - TTL Representation

    fhir:ContactPoint.system [ fhir:value "email" ]; fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:CodeSystem.description [ fhir:value "A set of terms that describe the transmission pattern of a condition in a pedigree."]; + ]; # + fhir:CodeSystem.description [ fhir:value "A set of terms that describe the transmission pattern of a condition in a pedigree."]; # fhir:CodeSystem.jurisdiction [ fhir:index 0; fhir:CodeableConcept.coding [ fhir:index 0; fhir:Coding.system [ fhir:value "http://unstats.un.org/unsd/methods/m49/m49.htm" ]; fhir:Coding.code [ fhir:value "001" ] ] - ]; - fhir:CodeSystem.content [ fhir:value "complete"]; - fhir:CodeSystem.count [ fhir:value "25"^^xsd:nonNegativeInteger]; + ]; # + fhir:CodeSystem.content [ fhir:value "complete"]; # + fhir:CodeSystem.count [ fhir:value "25"^^xsd:nonNegativeInteger]; # fhir:CodeSystem.concept [ fhir:index 0; fhir:CodeSystem.concept.code [ fhir:value "GENO:0000143" ]; @@ -432,7 +432,7 @@

    : Condition Inheritance Pattern - TTL Representation

    fhir:index 24; fhir:CodeSystem.concept.code [ fhir:value "SEPIO-CG:97023" ]; fhir:CodeSystem.concept.display [ fhir:value "Autosomal recessive inheritance (with genetic anticipation)" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -470,7 +470,7 @@

    : Condition Inheritance Pattern - TTL Representation

    - IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-11-28 + IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-12-09
    Links: Table of Contents | diff --git a/CodeSystem-ConditionInheritanceMode.xlsx b/CodeSystem-ConditionInheritanceMode.xlsx index e939dfd8..e05b939f 100644 Binary files a/CodeSystem-ConditionInheritanceMode.xlsx and b/CodeSystem-ConditionInheritanceMode.xlsx differ diff --git a/CodeSystem-ConditionInheritanceMode.xml b/CodeSystem-ConditionInheritanceMode.xml index 32655d3d..b64f2e9c 100644 --- a/CodeSystem-ConditionInheritanceMode.xml +++ b/CodeSystem-ConditionInheritanceMode.xml @@ -10,7 +10,7 @@ <status value="active"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/CodeSystem-ConditionInheritanceMode.xml.html b/CodeSystem-ConditionInheritanceMode.xml.html index 1a2e3210..c07ab9cf 100644 --- a/CodeSystem-ConditionInheritanceMode.xml.html +++ b/CodeSystem-ConditionInheritanceMode.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Condition Inheritance Pattern - XML Representation</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: Condition Inheritance Pattern - XML Representation</h2> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="ConditionInheritanceMode"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Condition Inheritance Pattern"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="active"/> - <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -463,7 +463,7 @@ <h2 id="root">: Condition Inheritance Pattern - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1-testing.html b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1-testing.html index f67d279b..49739c5c 100644 --- a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1-testing.html +++ b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">CodeSystem: Dataset CodeSystem (lists all tables) - Testing Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">CodeSystem: Dataset CodeSystem (lists all tables) - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.change.history.html b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.change.history.html index 598e1bad..ffe3140a 100644 --- a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.change.history.html +++ b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ExampleStudyDataDictionaryStudyDatasetCS1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.html b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.html index 6db785db..9b3465ac 100644 --- a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.html +++ b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -281,7 +281,7 @@ <h2 id="root">CodeSystem: Dataset CodeSystem (lists all tables) Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -356,7 +356,7 @@ <h2 id="root">CodeSystem: Dataset CodeSystem (lists all tables) <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.json b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.json index 83b3be6c..daaf39b4 100644 --- a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.json +++ b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.json @@ -1,44 +1,36 @@ -{ - "resourceType": "CodeSystem", - "id": "example-study-data-dictionary-dataset-codesystem-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td></tr><tr><td style=\"white-space:nowrap\">demographics<a name=\"example-study-data-dictionary-dataset-codesystem-1-demographics\"> </a></td></tr></table></div>" - }, - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1", - "version": "0.2.0", - "name": "ExampleStudyDataDictionaryStudyDatasetCS1", - "title": "Dataset CodeSystem (lists all tables)", - "status": "active", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "Example CodeSystem for a data-dictionary dataset with only 1 table.", - "content": "complete", - "count": 1, - "concept": [ - { - "code": "demographics" - } - ] +{ + "resourceType" : "CodeSystem", + "id" : "example-study-data-dictionary-dataset-codesystem-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td></tr><tr><td style=\"white-space:nowrap\">demographics<a name=\"example-study-data-dictionary-dataset-codesystem-1-demographics\"> </a></td></tr></table></div>" + }, + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1", + "version" : "0.2.0", + "name" : "ExampleStudyDataDictionaryStudyDatasetCS1", + "title" : "Dataset CodeSystem (lists all tables)", + "status" : "active", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "Example CodeSystem for a data-dictionary dataset with only 1 table.", + "content" : "complete", + "count" : 1, + "concept" : [{ + "code" : "demographics" + }] } \ No newline at end of file diff --git a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.json.html b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.json.html index 55094652..0bf5bb0d 100644 --- a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.json.html +++ b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Dataset CodeSystem (lists all tables) - JSON Representation</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -297,7 +297,7 @@ <h2 id="root">: Dataset CodeSystem (lists all tables) - JSON Representation</h2> "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">name</a>" : "ExampleStudyDataDictionaryStudyDatasetCS1", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a>" : "Dataset CodeSystem (lists all tables)", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a>" : "active", - "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>" : [ { @@ -358,7 +358,7 @@ <h2 id="root">: Dataset CodeSystem (lists all tables) - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.ttl b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.ttl index 3bfa01b6..989bb18f 100644 --- a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.ttl +++ b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.ttl @@ -7,18 +7,18 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1> a fhir:CodeSystem; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "example-study-data-dictionary-dataset-codesystem-1"]; + fhir:Resource.id [ fhir:value "example-study-data-dictionary-dataset-codesystem-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td></tr><tr><td style=\"white-space:nowrap\">demographics<a name=\"example-study-data-dictionary-dataset-codesystem-1-demographics\"> </a></td></tr></table></div>" - ]; - fhir:CodeSystem.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1"]; - fhir:CodeSystem.version [ fhir:value "0.2.0"]; - fhir:CodeSystem.name [ fhir:value "ExampleStudyDataDictionaryStudyDatasetCS1"]; - fhir:CodeSystem.title [ fhir:value "Dataset CodeSystem (lists all tables)"]; - fhir:CodeSystem.status [ fhir:value "active"]; - fhir:CodeSystem.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:CodeSystem.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1"]; # + fhir:CodeSystem.version [ fhir:value "0.2.0"]; # + fhir:CodeSystem.name [ fhir:value "ExampleStudyDataDictionaryStudyDatasetCS1"]; # + fhir:CodeSystem.title [ fhir:value "Dataset CodeSystem (lists all tables)"]; # + fhir:CodeSystem.status [ fhir:value "active"]; # + fhir:CodeSystem.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:CodeSystem.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -36,14 +36,14 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:CodeSystem.description [ fhir:value "Example CodeSystem for a data-dictionary dataset with only 1 table."]; - fhir:CodeSystem.content [ fhir:value "complete"]; - fhir:CodeSystem.count [ fhir:value "1"^^xsd:nonNegativeInteger]; + ]; # + fhir:CodeSystem.description [ fhir:value "Example CodeSystem for a data-dictionary dataset with only 1 table."]; # + fhir:CodeSystem.content [ fhir:value "complete"]; # + fhir:CodeSystem.count [ fhir:value "1"^^xsd:nonNegativeInteger]; # fhir:CodeSystem.concept [ fhir:index 0; fhir:CodeSystem.concept.code [ fhir:value "demographics" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.ttl.html b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.ttl.html index 38c30088..fc397beb 100644 --- a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.ttl.html +++ b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Dataset CodeSystem (lists all tables) - TTL Representation</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,18 +294,18 @@ <h2 id="root">: Dataset CodeSystem (lists all tables) - TTL Representation</h2> a fhir:CodeSystem; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "example-study-data-dictionary-dataset-codesystem-1"]; + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "example-study-data-dictionary-dataset-codesystem-1"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td></tr><tr><td style=\"white-space:nowrap\">demographics<a name=\"example-study-data-dictionary-dataset-codesystem-1-demographics\"> </a></td></tr></table></div>" - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ExampleStudyDataDictionaryStudyDatasetCS1"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Dataset CodeSystem (lists all tables)"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ExampleStudyDataDictionaryStudyDatasetCS1"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Dataset CodeSystem (lists all tables)"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">fhir:CodeSystem.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -321,14 +321,14 @@ <h2 id="root">: Dataset CodeSystem (lists all tables) - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Example CodeSystem for a data-dictionary dataset with only 1 table."]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "complete"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.count">fhir:CodeSystem.count</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "1"^^xsd:nonNegativeInteger]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Example CodeSystem for a data-dictionary dataset with only 1 table."]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "complete"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.count">fhir:CodeSystem.count</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "1"^^xsd:nonNegativeInteger]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept">fhir:CodeSystem.concept</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "demographics" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -366,7 +366,7 @@ <h2 id="root">: Dataset CodeSystem (lists all tables) - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.xlsx b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.xlsx index 9c8071f5..742c388e 100644 Binary files a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.xlsx and b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.xlsx differ diff --git a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.xml b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.xml index 3d077969..b976635c 100644 --- a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.xml +++ b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.xml @@ -10,7 +10,7 @@ <name value="ExampleStudyDataDictionaryStudyDatasetCS1"/> <title value="Dataset CodeSystem (lists all tables)"/> <status value="active"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.xml.html b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.xml.html index c25bfc3b..90bafb5e 100644 --- a/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.xml.html +++ b/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Dataset CodeSystem (lists all tables) - XML Representation</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: Dataset CodeSystem (lists all tables) - XML Representation</h2> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="ExampleStudyDataDictionaryStudyDatasetCS1"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Dataset CodeSystem (lists all tables)"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="active"/> - <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -352,7 +352,7 @@ <h2 id="root">: Dataset CodeSystem (lists all tables) - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1-testing.html b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1-testing.html index 4b5b12bc..6d6a46b4 100644 --- a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1-testing.html +++ b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">CodeSystem: Datatable CodeSystem (lists all variables) - Testing Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">CodeSystem: Datatable CodeSystem (lists all variables) - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.change.history.html b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.change.history.html index 160173b3..01ad6ff5 100644 --- a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.change.history.html +++ b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ExampleStudyDataDictionaryStudyTableCS1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html index feea0817..49e14de4 100644 --- a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html +++ b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -281,7 +281,7 @@ <h2 id="root">CodeSystem: Datatable CodeSystem (lists all variables) Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -359,7 +359,7 @@ <h2 id="root">CodeSystem: Datatable CodeSystem (lists all variables) <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.json b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.json index 0d03573b..dbb7eb32 100644 --- a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.json +++ b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.json @@ -1,61 +1,53 @@ -{ - "resourceType": "CodeSystem", - "id": "example-study-data-dictionary-datatable-codesystem-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">subjectid<a name=\"example-study-data-dictionary-datatable-codesystem-1-subjectid\"> </a></td><td>Subject's Unique Identifier</td></tr><tr><td style=\"white-space:nowrap\">gender<a name=\"example-study-data-dictionary-datatable-codesystem-1-gender\"> </a></td><td>Gender</td></tr><tr><td style=\"white-space:nowrap\">age_at_enrollment<a name=\"example-study-data-dictionary-datatable-codesystem-1-age_at_enrollment\"> </a></td><td>Subject's Age at Enrollment in days</td></tr><tr><td style=\"white-space:nowrap\">bmi<a name=\"example-study-data-dictionary-datatable-codesystem-1-bmi\"> </a></td><td>Subject's BMI, Measured at Enrollment</td></tr><tr><td style=\"white-space:nowrap\">status<a name=\"example-study-data-dictionary-datatable-codesystem-1-status\"> </a></td><td>Subject's status (Case or Control)</td></tr></table></div>" - }, - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "version": "0.2.0", - "name": "ExampleStudyDataDictionaryStudyTableCS1", - "title": "Datatable CodeSystem (lists all variables)", - "status": "active", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "Example CodeSystem for a data-dictionary table with 4 variables represented as codes.", - "content": "complete", - "count": 5, - "concept": [ - { - "code": "subjectid", - "display": "Subject's Unique Identifier" - }, - { - "code": "gender", - "display": "Gender" - }, - { - "code": "age_at_enrollment", - "display": "Subject's Age at Enrollment in days" - }, - { - "code": "bmi", - "display": "Subject's BMI, Measured at Enrollment" - }, - { - "code": "status", - "display": "Subject's status (Case or Control)" - } - ] +{ + "resourceType" : "CodeSystem", + "id" : "example-study-data-dictionary-datatable-codesystem-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">subjectid<a name=\"example-study-data-dictionary-datatable-codesystem-1-subjectid\"> </a></td><td>Subject's Unique Identifier</td></tr><tr><td style=\"white-space:nowrap\">gender<a name=\"example-study-data-dictionary-datatable-codesystem-1-gender\"> </a></td><td>Gender</td></tr><tr><td style=\"white-space:nowrap\">age_at_enrollment<a name=\"example-study-data-dictionary-datatable-codesystem-1-age_at_enrollment\"> </a></td><td>Subject's Age at Enrollment in days</td></tr><tr><td style=\"white-space:nowrap\">bmi<a name=\"example-study-data-dictionary-datatable-codesystem-1-bmi\"> </a></td><td>Subject's BMI, Measured at Enrollment</td></tr><tr><td style=\"white-space:nowrap\">status<a name=\"example-study-data-dictionary-datatable-codesystem-1-status\"> </a></td><td>Subject's status (Case or Control)</td></tr></table></div>" + }, + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "version" : "0.2.0", + "name" : "ExampleStudyDataDictionaryStudyTableCS1", + "title" : "Datatable CodeSystem (lists all variables)", + "status" : "active", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "Example CodeSystem for a data-dictionary table with 4 variables represented as codes.", + "content" : "complete", + "count" : 5, + "concept" : [{ + "code" : "subjectid", + "display" : "Subject's Unique Identifier" + }, + { + "code" : "gender", + "display" : "Gender" + }, + { + "code" : "age_at_enrollment", + "display" : "Subject's Age at Enrollment in days" + }, + { + "code" : "bmi", + "display" : "Subject's BMI, Measured at Enrollment" + }, + { + "code" : "status", + "display" : "Subject's status (Case or Control)" + }] } \ No newline at end of file diff --git a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.json.html b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.json.html index a88a3596..b2ffd08f 100644 --- a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.json.html +++ b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Datatable CodeSystem (lists all variables) - JSON Representation Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -297,7 +297,7 @@ <h2 id="root">: Datatable CodeSystem (lists all variables) - JSON Representation "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">name</a>" : "ExampleStudyDataDictionaryStudyTableCS1", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a>" : "Datatable CodeSystem (lists all variables)", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a>" : "active", - "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>" : [ { @@ -375,7 +375,7 @@ <h2 id="root">: Datatable CodeSystem (lists all variables) - JSON Representation <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.ttl b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.ttl index 905c7ddd..edd2a68d 100644 --- a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.ttl +++ b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.ttl @@ -7,18 +7,18 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1> a fhir:CodeSystem; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "example-study-data-dictionary-datatable-codesystem-1"]; + fhir:Resource.id [ fhir:value "example-study-data-dictionary-datatable-codesystem-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">subjectid<a name=\"example-study-data-dictionary-datatable-codesystem-1-subjectid\"> </a></td><td>Subject's Unique Identifier</td></tr><tr><td style=\"white-space:nowrap\">gender<a name=\"example-study-data-dictionary-datatable-codesystem-1-gender\"> </a></td><td>Gender</td></tr><tr><td style=\"white-space:nowrap\">age_at_enrollment<a name=\"example-study-data-dictionary-datatable-codesystem-1-age_at_enrollment\"> </a></td><td>Subject's Age at Enrollment in days</td></tr><tr><td style=\"white-space:nowrap\">bmi<a name=\"example-study-data-dictionary-datatable-codesystem-1-bmi\"> </a></td><td>Subject's BMI, Measured at Enrollment</td></tr><tr><td style=\"white-space:nowrap\">status<a name=\"example-study-data-dictionary-datatable-codesystem-1-status\"> </a></td><td>Subject's status (Case or Control)</td></tr></table></div>" - ]; - fhir:CodeSystem.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1"]; - fhir:CodeSystem.version [ fhir:value "0.2.0"]; - fhir:CodeSystem.name [ fhir:value "ExampleStudyDataDictionaryStudyTableCS1"]; - fhir:CodeSystem.title [ fhir:value "Datatable CodeSystem (lists all variables)"]; - fhir:CodeSystem.status [ fhir:value "active"]; - fhir:CodeSystem.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:CodeSystem.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1"]; # + fhir:CodeSystem.version [ fhir:value "0.2.0"]; # + fhir:CodeSystem.name [ fhir:value "ExampleStudyDataDictionaryStudyTableCS1"]; # + fhir:CodeSystem.title [ fhir:value "Datatable CodeSystem (lists all variables)"]; # + fhir:CodeSystem.status [ fhir:value "active"]; # + fhir:CodeSystem.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:CodeSystem.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -36,10 +36,10 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:CodeSystem.description [ fhir:value "Example CodeSystem for a data-dictionary table with 4 variables represented as codes."]; - fhir:CodeSystem.content [ fhir:value "complete"]; - fhir:CodeSystem.count [ fhir:value "5"^^xsd:nonNegativeInteger]; + ]; # + fhir:CodeSystem.description [ fhir:value "Example CodeSystem for a data-dictionary table with 4 variables represented as codes."]; # + fhir:CodeSystem.content [ fhir:value "complete"]; # + fhir:CodeSystem.count [ fhir:value "5"^^xsd:nonNegativeInteger]; # fhir:CodeSystem.concept [ fhir:index 0; fhir:CodeSystem.concept.code [ fhir:value "subjectid" ]; @@ -60,7 +60,7 @@ fhir:index 4; fhir:CodeSystem.concept.code [ fhir:value "status" ]; fhir:CodeSystem.concept.display [ fhir:value "Subject's status (Case or Control)" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.ttl.html b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.ttl.html index cfdc1a5c..17dd035e 100644 --- a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.ttl.html +++ b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Datatable CodeSystem (lists all variables) - TTL Representation< Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,18 +294,18 @@ <h2 id="root">: Datatable CodeSystem (lists all variables) - TTL Representation< a fhir:CodeSystem; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "example-study-data-dictionary-datatable-codesystem-1"]; + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "example-study-data-dictionary-datatable-codesystem-1"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">subjectid<a name=\"example-study-data-dictionary-datatable-codesystem-1-subjectid\"> </a></td><td>Subject's Unique Identifier</td></tr><tr><td style=\"white-space:nowrap\">gender<a name=\"example-study-data-dictionary-datatable-codesystem-1-gender\"> </a></td><td>Gender</td></tr><tr><td style=\"white-space:nowrap\">age_at_enrollment<a name=\"example-study-data-dictionary-datatable-codesystem-1-age_at_enrollment\"> </a></td><td>Subject's Age at Enrollment in days</td></tr><tr><td style=\"white-space:nowrap\">bmi<a name=\"example-study-data-dictionary-datatable-codesystem-1-bmi\"> </a></td><td>Subject's BMI, Measured at Enrollment</td></tr><tr><td style=\"white-space:nowrap\">status<a name=\"example-study-data-dictionary-datatable-codesystem-1-status\"> </a></td><td>Subject's status (Case or Control)</td></tr></table></div>" - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ExampleStudyDataDictionaryStudyTableCS1"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Datatable CodeSystem (lists all variables)"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ExampleStudyDataDictionaryStudyTableCS1"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Datatable CodeSystem (lists all variables)"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">fhir:CodeSystem.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -321,10 +321,10 @@ <h2 id="root">: Datatable CodeSystem (lists all variables) - TTL Representation< <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Example CodeSystem for a data-dictionary table with 4 variables represented as codes."]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "complete"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.count">fhir:CodeSystem.count</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "5"^^xsd:nonNegativeInteger]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Example CodeSystem for a data-dictionary table with 4 variables represented as codes."]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "complete"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.count">fhir:CodeSystem.count</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "5"^^xsd:nonNegativeInteger]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept">fhir:CodeSystem.concept</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "subjectid" ]; @@ -345,7 +345,7 @@ <h2 id="root">: Datatable CodeSystem (lists all variables) - TTL Representation< <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 4; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "status" ]; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.display">fhir:CodeSystem.concept.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Subject's status (Case or Control)" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -383,7 +383,7 @@ <h2 id="root">: Datatable CodeSystem (lists all variables) - TTL Representation< <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.xlsx b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.xlsx index e6850b5c..2146d5f0 100644 Binary files a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.xlsx and b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.xlsx differ diff --git a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.xml b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.xml index 45100941..dfebd41f 100644 --- a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.xml +++ b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.xml @@ -10,7 +10,7 @@ <name value="ExampleStudyDataDictionaryStudyTableCS1"/> <title value="Datatable CodeSystem (lists all variables)"/> <status value="active"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.xml.html b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.xml.html index 2ccfb63f..7423e0f9 100644 --- a/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.xml.html +++ b/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Datatable CodeSystem (lists all variables) - XML Representation< Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: Datatable CodeSystem (lists all variables) - XML Representation< <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="ExampleStudyDataDictionaryStudyTableCS1"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Datatable CodeSystem (lists all variables)"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="active"/> - <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -369,7 +369,7 @@ <h2 id="root">: Datatable CodeSystem (lists all variables) - XML Representation< <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-hpo-testing.html b/CodeSystem-hpo-testing.html index 1d655ea0..17a81535 100644 --- a/CodeSystem-hpo-testing.html +++ b/CodeSystem-hpo-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">CodeSystem: Human Phenotype Ontology - Testing Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">CodeSystem: Human Phenotype Ontology - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-hpo.change.history.html b/CodeSystem-hpo.change.history.html index 4357e1f1..494e7e5e 100644 --- a/CodeSystem-hpo.change.history.html +++ b/CodeSystem-hpo.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: HPO - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-hpo.html b/CodeSystem-hpo.html index 5eadf16a..897cf7cb 100644 --- a/CodeSystem-hpo.html +++ b/CodeSystem-hpo.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -281,7 +281,7 @@ <h2 id="root">CodeSystem: Human Phenotype Ontology Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -350,7 +350,7 @@ <h2 id="root">CodeSystem: Human Phenotype Ontology <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-hpo.json b/CodeSystem-hpo.json index 4bcb187c..b9821397 100644 --- a/CodeSystem-hpo.json +++ b/CodeSystem-hpo.json @@ -1,7611 +1,7593 @@ -{ - "resourceType": "CodeSystem", - "id": "hpo", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Properties</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Type</b></td><td><b>Description</b></td></tr><tr><td>parent</td><td>code</td><td>Parent codes.</td></tr><tr><td>imported</td><td>boolean</td><td>Indicates if the concept is imported from another code system.</td></tr><tr><td>root</td><td>boolean</td><td>Indicates if this concept is a root concept (i.e. Thing is equivalent or a direct parent)</td></tr><tr><td>deprecated</td><td>boolean</td><td>Indicates if this concept is deprecated.</td></tr></table><p><b>Filters</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Description</b></td><td><b>operator</b></td><td><b>Value</b></td></tr><tr><td>root</td><td/><td>= </td><td>True or false.</td></tr><tr><td>deprecated</td><td/><td>= </td><td>True or false.</td></tr><tr><td>imported</td><td/><td>= </td><td>True or false</td></tr></table><p>This code system <code>http://purl.obolibrary.org/obo/hp.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">HP:0000365<a name=\"hpo-HP.580000365\"> </a></td><td>Hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002564<a name=\"hpo-HP.580002564\"> </a></td><td>obsolete Malformation of the heart and great vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0001028<a name=\"hpo-HP.580001028\"> </a></td><td>Hemangioma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000476<a name=\"hpo-HP.580000476\"> </a></td><td>Cystic hygroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000568<a name=\"hpo-HP.580000568\"> </a></td><td>Microphthalmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000518<a name=\"hpo-HP.580000518\"> </a></td><td>Cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000612<a name=\"hpo-HP.580000612\"> </a></td><td>Iris coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000567<a name=\"hpo-HP.580000567\"> </a></td><td>Chorioretinal coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000316<a name=\"hpo-HP.580000316\"> </a></td><td>Hypertelorism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000482<a name=\"hpo-HP.580000482\"> </a></td><td>Microcornea</td></tr><tr><td style=\"white-space:nowrap\">HP:0000588<a name=\"hpo-HP.580000588\"> </a></td><td>Optic nerve coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0004426<a name=\"hpo-HP.580004426\"> </a></td><td>Abnormality of the cheek</td></tr><tr><td style=\"white-space:nowrap\">HP:0009125<a name=\"hpo-HP.580009125\"> </a></td><td>Lipodystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002023<a name=\"hpo-HP.580002023\"> </a></td><td>Anal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003468<a name=\"hpo-HP.580003468\"> </a></td><td>Abnormal vertebral morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000545<a name=\"hpo-HP.580000545\"> </a></td><td>Myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000122<a name=\"hpo-HP.580000122\"> </a></td><td>Unilateral renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002143<a name=\"hpo-HP.580002143\"> </a></td><td>Abnormality of the spinal cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0003508<a name=\"hpo-HP.580003508\"> </a></td><td>Proportionate short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0000271<a name=\"hpo-HP.580000271\"> </a></td><td>Abnormality of the face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000637<a name=\"hpo-HP.580000637\"> </a></td><td>Long palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000492<a name=\"hpo-HP.580000492\"> </a></td><td>Abnormal eyelid morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000389<a name=\"hpo-HP.580000389\"> </a></td><td>Chronic otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0000400<a name=\"hpo-HP.580000400\"> </a></td><td>Macrotia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000405<a name=\"hpo-HP.580000405\"> </a></td><td>Conductive hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0012712<a name=\"hpo-HP.580012712\"> </a></td><td>Mild hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0005280<a name=\"hpo-HP.580005280\"> </a></td><td>Depressed nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000431<a name=\"hpo-HP.580000431\"> </a></td><td>Wide nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000319<a name=\"hpo-HP.580000319\"> </a></td><td>Smooth philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000175<a name=\"hpo-HP.580000175\"> </a></td><td>Cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001611<a name=\"hpo-HP.580001611\"> </a></td><td>Nasal speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0002099<a name=\"hpo-HP.580002099\"> </a></td><td>Asthma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001397<a name=\"hpo-HP.580001397\"> </a></td><td>Hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001081<a name=\"hpo-HP.580001081\"> </a></td><td>Cholelithiasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002650<a name=\"hpo-HP.580002650\"> </a></td><td>Scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001212<a name=\"hpo-HP.580001212\"> </a></td><td>Prominent fingertip pads</td></tr><tr><td style=\"white-space:nowrap\">HP:0001328<a name=\"hpo-HP.580001328\"> </a></td><td>Specific learning disability</td></tr><tr><td style=\"white-space:nowrap\">HP:0000824<a name=\"hpo-HP.580000824\"> </a></td><td>Growth hormone deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002607<a name=\"hpo-HP.580002607\"> </a></td><td>Bowel incontinence</td></tr><tr><td style=\"white-space:nowrap\">HP:0100731<a name=\"hpo-HP.580100731\"> </a></td><td>Transverse facial cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0000528<a name=\"hpo-HP.580000528\"> </a></td><td>Anophthalmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000601<a name=\"hpo-HP.580000601\"> </a></td><td>Hypotelorism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000369<a name=\"hpo-HP.580000369\"> </a></td><td>Low-set ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001274<a name=\"hpo-HP.580001274\"> </a></td><td>Agenesis of corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002084<a name=\"hpo-HP.580002084\"> </a></td><td>Encephalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0007033<a name=\"hpo-HP.580007033\"> </a></td><td>Cerebellar dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100336<a name=\"hpo-HP.580100336\"> </a></td><td>Bilateral cleft lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0100337<a name=\"hpo-HP.580100337\"> </a></td><td>Bilateral cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001511<a name=\"hpo-HP.580001511\"> </a></td><td>Intrauterine growth retardation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011451<a name=\"hpo-HP.580011451\"> </a></td><td>Congenital microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000324<a name=\"hpo-HP.580000324\"> </a></td><td>Facial asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0000581<a name=\"hpo-HP.580000581\"> </a></td><td>Blepharophimosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000508<a name=\"hpo-HP.580000508\"> </a></td><td>Ptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008551<a name=\"hpo-HP.580008551\"> </a></td><td>Microtia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001631<a name=\"hpo-HP.580001631\"> </a></td><td>Atrial septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0000085<a name=\"hpo-HP.580000085\"> </a></td><td>Horseshoe kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0011927<a name=\"hpo-HP.580011927\"> </a></td><td>Short digit</td></tr><tr><td style=\"white-space:nowrap\">HP:0001156<a name=\"hpo-HP.580001156\"> </a></td><td>Brachydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002066<a name=\"hpo-HP.580002066\"> </a></td><td>Gait ataxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001250<a name=\"hpo-HP.580001250\"> </a></td><td>Seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001263<a name=\"hpo-HP.580001263\"> </a></td><td>Global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0001562<a name=\"hpo-HP.580001562\"> </a></td><td>Oligohydramnios</td></tr><tr><td style=\"white-space:nowrap\">HP:0001195<a name=\"hpo-HP.580001195\"> </a></td><td>Single umbilical artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0006349<a name=\"hpo-HP.580006349\"> </a></td><td>Agenesis of permanent teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000668<a name=\"hpo-HP.580000668\"> </a></td><td>Hypodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000677<a name=\"hpo-HP.580000677\"> </a></td><td>Oligodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001252<a name=\"hpo-HP.580001252\"> </a></td><td>Muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003429<a name=\"hpo-HP.580003429\"> </a></td><td>CNS hypomyelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0010864<a name=\"hpo-HP.580010864\"> </a></td><td>Intellectual disability, severe</td></tr><tr><td style=\"white-space:nowrap\">HP:0004325<a name=\"hpo-HP.580004325\"> </a></td><td>Decreased body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000666<a name=\"hpo-HP.580000666\"> </a></td><td>Horizontal nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000218<a name=\"hpo-HP.580000218\"> </a></td><td>High palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0010809<a name=\"hpo-HP.580010809\"> </a></td><td>Broad uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000767<a name=\"hpo-HP.580000767\"> </a></td><td>Pectus excavatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0003691<a name=\"hpo-HP.580003691\"> </a></td><td>Scapular winging</td></tr><tr><td style=\"white-space:nowrap\">HP:0002616<a name=\"hpo-HP.580002616\"> </a></td><td>Aortic root aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0001601<a name=\"hpo-HP.580001601\"> </a></td><td>Laryngomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002021<a name=\"hpo-HP.580002021\"> </a></td><td>Pyloric stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001388<a name=\"hpo-HP.580001388\"> </a></td><td>Joint laxity</td></tr><tr><td style=\"white-space:nowrap\">HP:0001187<a name=\"hpo-HP.580001187\"> </a></td><td>Hyperextensibility of the finger joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0000741<a name=\"hpo-HP.580000741\"> </a></td><td>Apathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000817<a name=\"hpo-HP.580000817\"> </a></td><td>Poor eye contact</td></tr><tr><td style=\"white-space:nowrap\">HP:0000821<a name=\"hpo-HP.580000821\"> </a></td><td>Hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000002<a name=\"hpo-HP.580000002\"> </a></td><td>Abnormality of body height</td></tr><tr><td style=\"white-space:nowrap\">HP:0000079<a name=\"hpo-HP.580000079\"> </a></td><td>Abnormality of the urinary system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000164<a name=\"hpo-HP.580000164\"> </a></td><td>Abnormality of the dentition</td></tr><tr><td style=\"white-space:nowrap\">HP:0000364<a name=\"hpo-HP.580000364\"> </a></td><td>Hearing abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000366<a name=\"hpo-HP.580000366\"> </a></td><td>Abnormality of the nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0000464<a name=\"hpo-HP.580000464\"> </a></td><td>Abnormality of the neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000707<a name=\"hpo-HP.580000707\"> </a></td><td>Abnormality of the nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000708<a name=\"hpo-HP.580000708\"> </a></td><td>Behavioral abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000769<a name=\"hpo-HP.580000769\"> </a></td><td>Abnormality of the breast</td></tr><tr><td style=\"white-space:nowrap\">HP:0000772<a name=\"hpo-HP.580000772\"> </a></td><td>Abnormality of the ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000775<a name=\"hpo-HP.580000775\"> </a></td><td>Abnormality of the diaphragm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000889<a name=\"hpo-HP.580000889\"> </a></td><td>Abnormality of the clavicle</td></tr><tr><td style=\"white-space:nowrap\">HP:0000925<a name=\"hpo-HP.580000925\"> </a></td><td>Abnormality of the vertebral column</td></tr><tr><td style=\"white-space:nowrap\">HP:0001080<a name=\"hpo-HP.580001080\"> </a></td><td>Biliary tract abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001392<a name=\"hpo-HP.580001392\"> </a></td><td>Abnormality of the liver</td></tr><tr><td style=\"white-space:nowrap\">HP:0001438<a name=\"hpo-HP.580001438\"> </a></td><td>Abnormal abdomen morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001608<a name=\"hpo-HP.580001608\"> </a></td><td>Abnormality of the voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001627<a name=\"hpo-HP.580001627\"> </a></td><td>Abnormal heart morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001732<a name=\"hpo-HP.580001732\"> </a></td><td>Abnormality of the pancreas</td></tr><tr><td style=\"white-space:nowrap\">HP:0001739<a name=\"hpo-HP.580001739\"> </a></td><td>Abnormality of the nasopharynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0001743<a name=\"hpo-HP.580001743\"> </a></td><td>Abnormality of the spleen</td></tr><tr><td style=\"white-space:nowrap\">HP:0001760<a name=\"hpo-HP.580001760\"> </a></td><td>Abnormal foot morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001871<a name=\"hpo-HP.580001871\"> </a></td><td>Abnormality of blood and blood-forming tissues</td></tr><tr><td style=\"white-space:nowrap\">HP:0002031<a name=\"hpo-HP.580002031\"> </a></td><td>Abnormal esophagus morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002244<a name=\"hpo-HP.580002244\"> </a></td><td>Abnormality of the small intestine</td></tr><tr><td style=\"white-space:nowrap\">HP:0002246<a name=\"hpo-HP.580002246\"> </a></td><td>Abnormality of the duodenum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002250<a name=\"hpo-HP.580002250\"> </a></td><td>Abnormal large intestine morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002644<a name=\"hpo-HP.580002644\"> </a></td><td>Abnormality of pelvic girdle bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002664<a name=\"hpo-HP.580002664\"> </a></td><td>Neoplasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0002715<a name=\"hpo-HP.580002715\"> </a></td><td>Abnormality of the immune system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002814<a name=\"hpo-HP.580002814\"> </a></td><td>Abnormality of the lower limb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002817<a name=\"hpo-HP.580002817\"> </a></td><td>Abnormality of the upper limb</td></tr><tr><td style=\"white-space:nowrap\">HP:0005483<a name=\"hpo-HP.580005483\"> </a></td><td>Abnormal epiglottis morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008777<a name=\"hpo-HP.580008777\"> </a></td><td>Abnormal vocal cord morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011844<a name=\"hpo-HP.580011844\"> </a></td><td>Abnormal appendicular skeleton morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012732<a name=\"hpo-HP.580012732\"> </a></td><td>Anorectal anomaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001508<a name=\"hpo-HP.580001508\"> </a></td><td>Failure to thrive</td></tr><tr><td style=\"white-space:nowrap\">HP:0002902<a name=\"hpo-HP.580002902\"> </a></td><td>Hyponatremia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012236<a name=\"hpo-HP.580012236\"> </a></td><td>Elevated sweat chloride</td></tr><tr><td style=\"white-space:nowrap\">HP:0000347<a name=\"hpo-HP.580000347\"> </a></td><td>Micrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000926<a name=\"hpo-HP.580000926\"> </a></td><td>Platyspondyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001371<a name=\"hpo-HP.580001371\"> </a></td><td>Flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0001875<a name=\"hpo-HP.580001875\"> </a></td><td>Neutropenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001888<a name=\"hpo-HP.580001888\"> </a></td><td>Lymphopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002857<a name=\"hpo-HP.580002857\"> </a></td><td>Genu valgum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002986<a name=\"hpo-HP.580002986\"> </a></td><td>Radial bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003015<a name=\"hpo-HP.580003015\"> </a></td><td>Flared metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003025<a name=\"hpo-HP.580003025\"> </a></td><td>Metaphyseal irregularity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003097<a name=\"hpo-HP.580003097\"> </a></td><td>Short femur</td></tr><tr><td style=\"white-space:nowrap\">HP:0003300<a name=\"hpo-HP.580003300\"> </a></td><td>Ovoid vertebral bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0003307<a name=\"hpo-HP.580003307\"> </a></td><td>Hyperlordosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004209<a name=\"hpo-HP.580004209\"> </a></td><td>Clinodactyly of the 5th finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0004322<a name=\"hpo-HP.580004322\"> </a></td><td>Short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0005792<a name=\"hpo-HP.580005792\"> </a></td><td>Short humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0006248<a name=\"hpo-HP.580006248\"> </a></td><td>Limited wrist movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0000944<a name=\"hpo-HP.580000944\"> </a></td><td>Abnormality of the metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011921<a name=\"hpo-HP.580011921\"> </a></td><td>Exudative pleural effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0003043<a name=\"hpo-HP.580003043\"> </a></td><td>Abnormality of the shoulder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000290<a name=\"hpo-HP.580000290\"> </a></td><td>Abnormality of the forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0005288<a name=\"hpo-HP.580005288\"> </a></td><td>Abnormality of the nares</td></tr><tr><td style=\"white-space:nowrap\">HP:0000234<a name=\"hpo-HP.580000234\"> </a></td><td>Abnormality of the head</td></tr><tr><td style=\"white-space:nowrap\">HP:0004323<a name=\"hpo-HP.580004323\"> </a></td><td>Abnormality of body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000483<a name=\"hpo-HP.580000483\"> </a></td><td>Astigmatism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011003<a name=\"hpo-HP.580011003\"> </a></td><td>High myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000470<a name=\"hpo-HP.580000470\"> </a></td><td>Short neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0030044<a name=\"hpo-HP.580030044\"> </a></td><td>Flexion contracture of digit</td></tr><tr><td style=\"white-space:nowrap\">HP:0100871<a name=\"hpo-HP.580100871\"> </a></td><td>Abnormality of the palm</td></tr><tr><td style=\"white-space:nowrap\">HP:0004334<a name=\"hpo-HP.580004334\"> </a></td><td>Dermal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001845<a name=\"hpo-HP.580001845\"> </a></td><td>Overlapping toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000496<a name=\"hpo-HP.580000496\"> </a></td><td>Abnormality of eye movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0001780<a name=\"hpo-HP.580001780\"> </a></td><td>Abnormality of toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001626<a name=\"hpo-HP.580001626\"> </a></td><td>Abnormality of the cardiovascular system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002086<a name=\"hpo-HP.580002086\"> </a></td><td>Abnormality of the respiratory system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000818<a name=\"hpo-HP.580000818\"> </a></td><td>Abnormality of the endocrine system</td></tr><tr><td style=\"white-space:nowrap\">HP:0012372<a name=\"hpo-HP.580012372\"> </a></td><td>Abnormal eye morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009473<a name=\"hpo-HP.580009473\"> </a></td><td>Joint contracture of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0003199<a name=\"hpo-HP.580003199\"> </a></td><td>Decreased muscle mass</td></tr><tr><td style=\"white-space:nowrap\">HP:0003202<a name=\"hpo-HP.580003202\"> </a></td><td>Skeletal muscle atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003551<a name=\"hpo-HP.580003551\"> </a></td><td>Difficulty climbing stairs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002355<a name=\"hpo-HP.580002355\"> </a></td><td>Difficulty walking</td></tr><tr><td style=\"white-space:nowrap\">HP:0003546<a name=\"hpo-HP.580003546\"> </a></td><td>Exercise intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0003325<a name=\"hpo-HP.580003325\"> </a></td><td>Limb-girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003701<a name=\"hpo-HP.580003701\"> </a></td><td>Proximal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003547<a name=\"hpo-HP.580003547\"> </a></td><td>Shoulder girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0007340<a name=\"hpo-HP.580007340\"> </a></td><td>Lower limb muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002168<a name=\"hpo-HP.580002168\"> </a></td><td>Scanning speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0001265<a name=\"hpo-HP.580001265\"> </a></td><td>Hyporeflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001284<a name=\"hpo-HP.580001284\"> </a></td><td>Areflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003477<a name=\"hpo-HP.580003477\"> </a></td><td>Peripheral axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000924<a name=\"hpo-HP.580000924\"> </a></td><td>Abnormality of the skeletal system</td></tr><tr><td style=\"white-space:nowrap\">HP:0001291<a name=\"hpo-HP.580001291\"> </a></td><td>Abnormal cranial nerve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003687<a name=\"hpo-HP.580003687\"> </a></td><td>Centrally nucleated skeletal muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0001324<a name=\"hpo-HP.580001324\"> </a></td><td>Muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002515<a name=\"hpo-HP.580002515\"> </a></td><td>Waddling gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0100280<a name=\"hpo-HP.580100280\"> </a></td><td>Crohn's disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0002631<a name=\"hpo-HP.580002631\"> </a></td><td>obsolete Dilatation of ascending aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0100026<a name=\"hpo-HP.580100026\"> </a></td><td>Arteriovenous malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002637<a name=\"hpo-HP.580002637\"> </a></td><td>Cerebral ischemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002619<a name=\"hpo-HP.580002619\"> </a></td><td>Varicose veins</td></tr><tr><td style=\"white-space:nowrap\">HP:0001159<a name=\"hpo-HP.580001159\"> </a></td><td>Syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002069<a name=\"hpo-HP.580002069\"> </a></td><td>Bilateral tonic-clonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000977<a name=\"hpo-HP.580000977\"> </a></td><td>Soft skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010648<a name=\"hpo-HP.580010648\"> </a></td><td>Dermal translucency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000978<a name=\"hpo-HP.580000978\"> </a></td><td>Bruising susceptibility</td></tr><tr><td style=\"white-space:nowrap\">HP:0001956<a name=\"hpo-HP.580001956\"> </a></td><td>Truncal obesity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000189<a name=\"hpo-HP.580000189\"> </a></td><td>Narrow palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000678<a name=\"hpo-HP.580000678\"> </a></td><td>Dental crowding</td></tr><tr><td style=\"white-space:nowrap\">HP:0002870<a name=\"hpo-HP.580002870\"> </a></td><td>Obstructive sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001763<a name=\"hpo-HP.580001763\"> </a></td><td>Pes planus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000782<a name=\"hpo-HP.580000782\"> </a></td><td>Abnormality of the scapula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001600<a name=\"hpo-HP.580001600\"> </a></td><td>Abnormality of the larynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0002088<a name=\"hpo-HP.580002088\"> </a></td><td>Abnormal lung morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011407<a name=\"hpo-HP.580011407\"> </a></td><td>Proportionate tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0000541<a name=\"hpo-HP.580000541\"> </a></td><td>Retinal detachment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001373<a name=\"hpo-HP.580001373\"> </a></td><td>Joint dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000938<a name=\"hpo-HP.580000938\"> </a></td><td>Osteopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002942<a name=\"hpo-HP.580002942\"> </a></td><td>Thoracic kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001840<a name=\"hpo-HP.580001840\"> </a></td><td>Metatarsus adductus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001844<a name=\"hpo-HP.580001844\"> </a></td><td>Abnormality of the hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0001765<a name=\"hpo-HP.580001765\"> </a></td><td>Hammertoe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000606<a name=\"hpo-HP.580000606\"> </a></td><td>Abnormality of the periorbital region</td></tr><tr><td style=\"white-space:nowrap\">HP:0002757<a name=\"hpo-HP.580002757\"> </a></td><td>Recurrent fractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0000647<a name=\"hpo-HP.580000647\"> </a></td><td>Sclerocornea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001166<a name=\"hpo-HP.580001166\"> </a></td><td>Arachnodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005490<a name=\"hpo-HP.580005490\"> </a></td><td>Postnatal macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0011363<a name=\"hpo-HP.580011363\"> </a></td><td>Abnormality of hair growth rate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000276<a name=\"hpo-HP.580000276\"> </a></td><td>Long face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000275<a name=\"hpo-HP.580000275\"> </a></td><td>Narrow face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000337<a name=\"hpo-HP.580000337\"> </a></td><td>Broad forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0002267<a name=\"hpo-HP.580002267\"> </a></td><td>Exaggerated startle response</td></tr><tr><td style=\"white-space:nowrap\">HP:0002187<a name=\"hpo-HP.580002187\"> </a></td><td>Intellectual disability, profound</td></tr><tr><td style=\"white-space:nowrap\">HP:0000728<a name=\"hpo-HP.580000728\"> </a></td><td>Impaired ability to form peer relationships</td></tr><tr><td style=\"white-space:nowrap\">HP:0000733<a name=\"hpo-HP.580000733\"> </a></td><td>Stereotypy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000739<a name=\"hpo-HP.580000739\"> </a></td><td>Anxiety</td></tr><tr><td style=\"white-space:nowrap\">HP:0000929<a name=\"hpo-HP.580000929\"> </a></td><td>Abnormal skull morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001965<a name=\"hpo-HP.580001965\"> </a></td><td>Abnormal scalp morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100538<a name=\"hpo-HP.580100538\"> </a></td><td>Abnormality of the supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0000309<a name=\"hpo-HP.580000309\"> </a></td><td>Abnormality of the midface</td></tr><tr><td style=\"white-space:nowrap\">HP:0000277<a name=\"hpo-HP.580000277\"> </a></td><td>Abnormality of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000765<a name=\"hpo-HP.580000765\"> </a></td><td>Abnormality of the thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0100008<a name=\"hpo-HP.580100008\"> </a></td><td>Schwannoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0030038<a name=\"hpo-HP.580030038\"> </a></td><td>Enchondroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0100777<a name=\"hpo-HP.580100777\"> </a></td><td>Exostoses</td></tr><tr><td style=\"white-space:nowrap\">HP:0011663<a name=\"hpo-HP.580011663\"> </a></td><td>Right ventricular cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011675<a name=\"hpo-HP.580011675\"> </a></td><td>Arrhythmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001962<a name=\"hpo-HP.580001962\"> </a></td><td>Palpitations</td></tr><tr><td style=\"white-space:nowrap\">HP:0001279<a name=\"hpo-HP.580001279\"> </a></td><td>Syncope</td></tr><tr><td style=\"white-space:nowrap\">HP:0004756<a name=\"hpo-HP.580004756\"> </a></td><td>Ventricular tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000252<a name=\"hpo-HP.580000252\"> </a></td><td>Microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000303<a name=\"hpo-HP.580000303\"> </a></td><td>Mandibular prognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000664<a name=\"hpo-HP.580000664\"> </a></td><td>Synophrys</td></tr><tr><td style=\"white-space:nowrap\">HP:0001609<a name=\"hpo-HP.580001609\"> </a></td><td>Hoarse voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0002558<a name=\"hpo-HP.580002558\"> </a></td><td>Supernumerary nipple</td></tr><tr><td style=\"white-space:nowrap\">HP:0001634<a name=\"hpo-HP.580001634\"> </a></td><td>Mitral valve prolapse</td></tr><tr><td style=\"white-space:nowrap\">HP:0000028<a name=\"hpo-HP.580000028\"> </a></td><td>Cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000973<a name=\"hpo-HP.580000973\"> </a></td><td>Cutis laxa</td></tr><tr><td style=\"white-space:nowrap\">HP:0001518<a name=\"hpo-HP.580001518\"> </a></td><td>Small for gestational age</td></tr><tr><td style=\"white-space:nowrap\">HP:0000527<a name=\"hpo-HP.580000527\"> </a></td><td>Long eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002808<a name=\"hpo-HP.580002808\"> </a></td><td>Kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000248<a name=\"hpo-HP.580000248\"> </a></td><td>Brachycephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000505<a name=\"hpo-HP.580000505\"> </a></td><td>Visual impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000512<a name=\"hpo-HP.580000512\"> </a></td><td>Abnormal electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:0000517<a name=\"hpo-HP.580000517\"> </a></td><td>Abnormality of the lens</td></tr><tr><td style=\"white-space:nowrap\">HP:0000529<a name=\"hpo-HP.580000529\"> </a></td><td>Progressive visual loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0000586<a name=\"hpo-HP.580000586\"> </a></td><td>Shallow orbits</td></tr><tr><td style=\"white-space:nowrap\">HP:0000603<a name=\"hpo-HP.580000603\"> </a></td><td>Central scotoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000939<a name=\"hpo-HP.580000939\"> </a></td><td>Osteoporosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001377<a name=\"hpo-HP.580001377\"> </a></td><td>Limited elbow extension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001387<a name=\"hpo-HP.580001387\"> </a></td><td>Joint stiffness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001822<a name=\"hpo-HP.580001822\"> </a></td><td>Hallux valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0002657<a name=\"hpo-HP.580002657\"> </a></td><td>Spondylometaphyseal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003026<a name=\"hpo-HP.580003026\"> </a></td><td>Short long bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0006462<a name=\"hpo-HP.580006462\"> </a></td><td>Generalized bone demineralization</td></tr><tr><td style=\"white-space:nowrap\">HP:0008873<a name=\"hpo-HP.580008873\"> </a></td><td>Disproportionate short-limb short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0008905<a name=\"hpo-HP.580008905\"> </a></td><td>Rhizomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008922<a name=\"hpo-HP.580008922\"> </a></td><td>Childhood-onset short-trunk short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0200020<a name=\"hpo-HP.580200020\"> </a></td><td>Corneal erosion</td></tr><tr><td style=\"white-space:nowrap\">HP:0001172<a name=\"hpo-HP.580001172\"> </a></td><td>Abnormal thumb morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002286<a name=\"hpo-HP.580002286\"> </a></td><td>Fair hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0010719<a name=\"hpo-HP.580010719\"> </a></td><td>Abnormality of hair texture</td></tr><tr><td style=\"white-space:nowrap\">HP:0010720<a name=\"hpo-HP.580010720\"> </a></td><td>Abnormal hair pattern</td></tr><tr><td style=\"white-space:nowrap\">HP:0001635<a name=\"hpo-HP.580001635\"> </a></td><td>Congestive heart failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001644<a name=\"hpo-HP.580001644\"> </a></td><td>Dilated cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001663<a name=\"hpo-HP.580001663\"> </a></td><td>Ventricular fibrillation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011712<a name=\"hpo-HP.580011712\"> </a></td><td>Right bundle branch block</td></tr><tr><td style=\"white-space:nowrap\">HP:0000272<a name=\"hpo-HP.580000272\"> </a></td><td>Malar flattening</td></tr><tr><td style=\"white-space:nowrap\">HP:0000286<a name=\"hpo-HP.580000286\"> </a></td><td>Epicanthus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000322<a name=\"hpo-HP.580000322\"> </a></td><td>Short philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000463<a name=\"hpo-HP.580000463\"> </a></td><td>Anteverted nares</td></tr><tr><td style=\"white-space:nowrap\">HP:0000494<a name=\"hpo-HP.580000494\"> </a></td><td>Downslanted palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0000543<a name=\"hpo-HP.580000543\"> </a></td><td>Optic disc pallor</td></tr><tr><td style=\"white-space:nowrap\">HP:0000699<a name=\"hpo-HP.580000699\"> </a></td><td>Diastema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000773<a name=\"hpo-HP.580000773\"> </a></td><td>Short ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000887<a name=\"hpo-HP.580000887\"> </a></td><td>Cupped ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000946<a name=\"hpo-HP.580000946\"> </a></td><td>Hypoplastic ilia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000954<a name=\"hpo-HP.580000954\"> </a></td><td>Single transverse palmar crease</td></tr><tr><td style=\"white-space:nowrap\">HP:0001182<a name=\"hpo-HP.580001182\"> </a></td><td>Tapered finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0001537<a name=\"hpo-HP.580001537\"> </a></td><td>Umbilical hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002007<a name=\"hpo-HP.580002007\"> </a></td><td>Frontal bossing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002980<a name=\"hpo-HP.580002980\"> </a></td><td>Femoral bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002982<a name=\"hpo-HP.580002982\"> </a></td><td>Tibial bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003021<a name=\"hpo-HP.580003021\"> </a></td><td>Metaphyseal cupping</td></tr><tr><td style=\"white-space:nowrap\">HP:0005011<a name=\"hpo-HP.580005011\"> </a></td><td>Mesomelic arm shortening</td></tr><tr><td style=\"white-space:nowrap\">HP:0008803<a name=\"hpo-HP.580008803\"> </a></td><td>obsolete Narrow sacroiliac notch</td></tr><tr><td style=\"white-space:nowrap\">HP:0009117<a name=\"hpo-HP.580009117\"> </a></td><td>Aplasia/Hypoplasia of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0011220<a name=\"hpo-HP.580011220\"> </a></td><td>Prominent forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0012801<a name=\"hpo-HP.580012801\"> </a></td><td>Narrow jaw</td></tr><tr><td style=\"white-space:nowrap\">HP:0000243<a name=\"hpo-HP.580000243\"> </a></td><td>Trigonocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000358<a name=\"hpo-HP.580000358\"> </a></td><td>Posteriorly rotated ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0000411<a name=\"hpo-HP.580000411\"> </a></td><td>Protruding ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000646<a name=\"hpo-HP.580000646\"> </a></td><td>Amblyopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002812<a name=\"hpo-HP.580002812\"> </a></td><td>Coxa vara</td></tr><tr><td style=\"white-space:nowrap\">HP:0002970<a name=\"hpo-HP.580002970\"> </a></td><td>Genu varum</td></tr><tr><td style=\"white-space:nowrap\">HP:0012775<a name=\"hpo-HP.580012775\"> </a></td><td>Stellate iris</td></tr><tr><td style=\"white-space:nowrap\">HP:0000278<a name=\"hpo-HP.580000278\"> </a></td><td>Retrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0009796<a name=\"hpo-HP.580009796\"> </a></td><td>Branchial cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0002474<a name=\"hpo-HP.580002474\"> </a></td><td>Expressive language delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0007018<a name=\"hpo-HP.580007018\"> </a></td><td>Attention deficit hyperactivity disorder</td></tr><tr><td style=\"white-space:nowrap\">HP:0003198<a name=\"hpo-HP.580003198\"> </a></td><td>Myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003324<a name=\"hpo-HP.580003324\"> </a></td><td>Generalized muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003552<a name=\"hpo-HP.580003552\"> </a></td><td>Muscle stiffness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003554<a name=\"hpo-HP.580003554\"> </a></td><td>Type 2 muscle fiber atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003557<a name=\"hpo-HP.580003557\"> </a></td><td>Increased variability in muscle fiber diameter</td></tr><tr><td style=\"white-space:nowrap\">HP:0009025<a name=\"hpo-HP.580009025\"> </a></td><td>Increased connective tissue</td></tr><tr><td style=\"white-space:nowrap\">HP:0003635<a name=\"hpo-HP.580003635\"> </a></td><td>Loss of subcutaneous adipose tissue in limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002597<a name=\"hpo-HP.580002597\"> </a></td><td>Abnormality of the vasculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0001649<a name=\"hpo-HP.580001649\"> </a></td><td>Tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001638<a name=\"hpo-HP.580001638\"> </a></td><td>Cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001654<a name=\"hpo-HP.580001654\"> </a></td><td>Abnormal heart valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001671<a name=\"hpo-HP.580001671\"> </a></td><td>Abnormal cardiac septum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000103<a name=\"hpo-HP.580000103\"> </a></td><td>Polyuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0000114<a name=\"hpo-HP.580000114\"> </a></td><td>Proximal tubulopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001878<a name=\"hpo-HP.580001878\"> </a></td><td>Hemolytic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001931<a name=\"hpo-HP.580001931\"> </a></td><td>Hypochromic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001935<a name=\"hpo-HP.580001935\"> </a></td><td>Microcytic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001959<a name=\"hpo-HP.580001959\"> </a></td><td>Polydipsia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001994<a name=\"hpo-HP.580001994\"> </a></td><td>Renal Fanconi syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002134<a name=\"hpo-HP.580002134\"> </a></td><td>Abnormality of the basal ganglia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002188<a name=\"hpo-HP.580002188\"> </a></td><td>Delayed CNS myelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0002908<a name=\"hpo-HP.580002908\"> </a></td><td>Conjugated hyperbilirubinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003774<a name=\"hpo-HP.580003774\"> </a></td><td>Stage 5 chronic kidney disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0010700<a name=\"hpo-HP.580010700\"> </a></td><td>obsolete Total cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000193<a name=\"hpo-HP.580000193\"> </a></td><td>Bifid uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000219<a name=\"hpo-HP.580000219\"> </a></td><td>Thin upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000426<a name=\"hpo-HP.580000426\"> </a></td><td>Prominent nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000452<a name=\"hpo-HP.580000452\"> </a></td><td>Choanal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000490<a name=\"hpo-HP.580000490\"> </a></td><td>Deeply set eye</td></tr><tr><td style=\"white-space:nowrap\">HP:0000540<a name=\"hpo-HP.580000540\"> </a></td><td>Hypermetropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000579<a name=\"hpo-HP.580000579\"> </a></td><td>Nasolacrimal duct obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0000684<a name=\"hpo-HP.580000684\"> </a></td><td>Delayed eruption of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000960<a name=\"hpo-HP.580000960\"> </a></td><td>Sacral dimple</td></tr><tr><td style=\"white-space:nowrap\">HP:0000998<a name=\"hpo-HP.580000998\"> </a></td><td>Hypertrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001643<a name=\"hpo-HP.580001643\"> </a></td><td>Patent ductus arteriosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010813<a name=\"hpo-HP.580010813\"> </a></td><td>Abnormal number of hair whorls</td></tr><tr><td style=\"white-space:nowrap\">HP:0012384<a name=\"hpo-HP.580012384\"> </a></td><td>Rhinitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012745<a name=\"hpo-HP.580012745\"> </a></td><td>Short palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000359<a name=\"hpo-HP.580000359\"> </a></td><td>Abnormality of the inner ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000429<a name=\"hpo-HP.580000429\"> </a></td><td>Abnormality of the nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000436<a name=\"hpo-HP.580000436\"> </a></td><td>Abnormality of the nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000499<a name=\"hpo-HP.580000499\"> </a></td><td>Abnormal eyelash morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000534<a name=\"hpo-HP.580000534\"> </a></td><td>Abnormal eyebrow morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000951<a name=\"hpo-HP.580000951\"> </a></td><td>Abnormality of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001000<a name=\"hpo-HP.580001000\"> </a></td><td>Abnormality of skin pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001597<a name=\"hpo-HP.580001597\"> </a></td><td>Abnormality of the nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0006483<a name=\"hpo-HP.580006483\"> </a></td><td>Abnormal number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009929<a name=\"hpo-HP.580009929\"> </a></td><td>Abnormality of the columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0011119<a name=\"hpo-HP.580011119\"> </a></td><td>Abnormality of the nasal dorsum</td></tr><tr><td style=\"white-space:nowrap\">HP:0012808<a name=\"hpo-HP.580012808\"> </a></td><td>Abnormal nasal base</td></tr><tr><td style=\"white-space:nowrap\">HP:0100490<a name=\"hpo-HP.580100490\"> </a></td><td>Camptodactyly of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0000964<a name=\"hpo-HP.580000964\"> </a></td><td>Eczema</td></tr><tr><td style=\"white-space:nowrap\">HP:0004442<a name=\"hpo-HP.580004442\"> </a></td><td>Sagittal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000414<a name=\"hpo-HP.580000414\"> </a></td><td>Bulbous nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0003180<a name=\"hpo-HP.580003180\"> </a></td><td>Flat acetabular roof</td></tr><tr><td style=\"white-space:nowrap\">HP:0000422<a name=\"hpo-HP.580000422\"> </a></td><td>Abnormality of the nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000614<a name=\"hpo-HP.580000614\"> </a></td><td>Abnormal nasolacrimal system morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001167<a name=\"hpo-HP.580001167\"> </a></td><td>Abnormality of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0001595<a name=\"hpo-HP.580001595\"> </a></td><td>Abnormal hair morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012373<a name=\"hpo-HP.580012373\"> </a></td><td>Abnormal eye physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001655<a name=\"hpo-HP.580001655\"> </a></td><td>Patent foramen ovale</td></tr><tr><td style=\"white-space:nowrap\">HP:0001647<a name=\"hpo-HP.580001647\"> </a></td><td>Bicuspid aortic valve</td></tr><tr><td style=\"white-space:nowrap\">HP:0000574<a name=\"hpo-HP.580000574\"> </a></td><td>Thick eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0001169<a name=\"hpo-HP.580001169\"> </a></td><td>Broad palm</td></tr><tr><td style=\"white-space:nowrap\">HP:0006471<a name=\"hpo-HP.580006471\"> </a></td><td>Fixed elbow flexion</td></tr><tr><td style=\"white-space:nowrap\">HP:0008689<a name=\"hpo-HP.580008689\"> </a></td><td>Bilateral cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011304<a name=\"hpo-HP.580011304\"> </a></td><td>Broad thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0005110<a name=\"hpo-HP.580005110\"> </a></td><td>Atrial fibrillation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001633<a name=\"hpo-HP.580001633\"> </a></td><td>Abnormal mitral valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001641<a name=\"hpo-HP.580001641\"> </a></td><td>Abnormal pulmonary valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001702<a name=\"hpo-HP.580001702\"> </a></td><td>Abnormal tricuspid valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000012<a name=\"hpo-HP.580000012\"> </a></td><td>Urinary urgency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000020<a name=\"hpo-HP.580000020\"> </a></td><td>Urinary incontinence</td></tr><tr><td style=\"white-space:nowrap\">HP:0000131<a name=\"hpo-HP.580000131\"> </a></td><td>Uterine leiomyoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000132<a name=\"hpo-HP.580000132\"> </a></td><td>Menorrhagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000138<a name=\"hpo-HP.580000138\"> </a></td><td>Ovarian cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0000853<a name=\"hpo-HP.580000853\"> </a></td><td>Goiter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000953<a name=\"hpo-HP.580000953\"> </a></td><td>Hyperpigmentation of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001061<a name=\"hpo-HP.580001061\"> </a></td><td>Acne</td></tr><tr><td style=\"white-space:nowrap\">HP:0002315<a name=\"hpo-HP.580002315\"> </a></td><td>Headache</td></tr><tr><td style=\"white-space:nowrap\">HP:0004324<a name=\"hpo-HP.580004324\"> </a></td><td>Increased body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000069<a name=\"hpo-HP.580000069\"> </a></td><td>Abnormality of the ureter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000077<a name=\"hpo-HP.580000077\"> </a></td><td>Abnormality of the kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0000759<a name=\"hpo-HP.580000759\"> </a></td><td>Abnormal peripheral nervous system morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008069<a name=\"hpo-HP.580008069\"> </a></td><td>Neoplasm of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011276<a name=\"hpo-HP.580011276\"> </a></td><td>Vascular skin abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000705<a name=\"hpo-HP.580000705\"> </a></td><td>Amelogenesis imperfecta</td></tr><tr><td style=\"white-space:nowrap\">HP:0001256<a name=\"hpo-HP.580001256\"> </a></td><td>Intellectual disability, mild</td></tr><tr><td style=\"white-space:nowrap\">HP:0000325<a name=\"hpo-HP.580000325\"> </a></td><td>Triangular face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000160<a name=\"hpo-HP.580000160\"> </a></td><td>Narrow mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009487<a name=\"hpo-HP.580009487\"> </a></td><td>Ulnar deviation of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0001249<a name=\"hpo-HP.580001249\"> </a></td><td>Intellectual disability</td></tr><tr><td style=\"white-space:nowrap\">HP:0008064<a name=\"hpo-HP.580008064\"> </a></td><td>Ichthyosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000311<a name=\"hpo-HP.580000311\"> </a></td><td>Round face</td></tr><tr><td style=\"white-space:nowrap\">HP:0001653<a name=\"hpo-HP.580001653\"> </a></td><td>Mitral regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001771<a name=\"hpo-HP.580001771\"> </a></td><td>Achilles tendon contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0012032<a name=\"hpo-HP.580012032\"> </a></td><td>Lipoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0012368<a name=\"hpo-HP.580012368\"> </a></td><td>Flat face</td></tr><tr><td style=\"white-space:nowrap\">HP:0030053<a name=\"hpo-HP.580030053\"> </a></td><td>Stiff skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011124<a name=\"hpo-HP.580011124\"> </a></td><td>Abnormality of epidermal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011097<a name=\"hpo-HP.580011097\"> </a></td><td>Epileptic spasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000407<a name=\"hpo-HP.580000407\"> </a></td><td>Sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000331<a name=\"hpo-HP.580000331\"> </a></td><td>Short chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000340<a name=\"hpo-HP.580000340\"> </a></td><td>Sloping forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0000486<a name=\"hpo-HP.580000486\"> </a></td><td>Strabismus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000713<a name=\"hpo-HP.580000713\"> </a></td><td>Agitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000802<a name=\"hpo-HP.580000802\"> </a></td><td>Impotence</td></tr><tr><td style=\"white-space:nowrap\">HP:0001272<a name=\"hpo-HP.580001272\"> </a></td><td>Cerebellar atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001276<a name=\"hpo-HP.580001276\"> </a></td><td>Hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001321<a name=\"hpo-HP.580001321\"> </a></td><td>Cerebellar hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001322<a name=\"hpo-HP.580001322\"> </a></td><td>obsolete Brain very small</td></tr><tr><td style=\"white-space:nowrap\">HP:0002061<a name=\"hpo-HP.580002061\"> </a></td><td>Lower limb spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002529<a name=\"hpo-HP.580002529\"> </a></td><td>Neuronal loss in central nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002540<a name=\"hpo-HP.580002540\"> </a></td><td>Inability to walk</td></tr><tr><td style=\"white-space:nowrap\">HP:0005484<a name=\"hpo-HP.580005484\"> </a></td><td>Postnatal microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0012850<a name=\"hpo-HP.580012850\"> </a></td><td>Small intestinal dysmotility</td></tr><tr><td style=\"white-space:nowrap\">HP:0000504<a name=\"hpo-HP.580000504\"> </a></td><td>Abnormality of vision</td></tr><tr><td style=\"white-space:nowrap\">HP:0002118<a name=\"hpo-HP.580002118\"> </a></td><td>Abnormality of the cerebral ventricles</td></tr><tr><td style=\"white-space:nowrap\">HP:0002363<a name=\"hpo-HP.580002363\"> </a></td><td>Abnormality of brainstem morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0010651<a name=\"hpo-HP.580010651\"> </a></td><td>Abnormal meningeal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100024<a name=\"hpo-HP.580100024\"> </a></td><td>Conspicuously happy disposition</td></tr><tr><td style=\"white-space:nowrap\">HP:0002538<a name=\"hpo-HP.580002538\"> </a></td><td>Abnormality of the cerebral cortex</td></tr><tr><td style=\"white-space:nowrap\">HP:0000054<a name=\"hpo-HP.580000054\"> </a></td><td>Micropenis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000215<a name=\"hpo-HP.580000215\"> </a></td><td>Thick upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000293<a name=\"hpo-HP.580000293\"> </a></td><td>Full cheeks</td></tr><tr><td style=\"white-space:nowrap\">HP:0000349<a name=\"hpo-HP.580000349\"> </a></td><td>Widow's peak</td></tr><tr><td style=\"white-space:nowrap\">HP:0000444<a name=\"hpo-HP.580000444\"> </a></td><td>Convex nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000506<a name=\"hpo-HP.580000506\"> </a></td><td>Telecanthus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000592<a name=\"hpo-HP.580000592\"> </a></td><td>Blue sclerae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000691<a name=\"hpo-HP.580000691\"> </a></td><td>Microdontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000698<a name=\"hpo-HP.580000698\"> </a></td><td>Conical tooth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002000<a name=\"hpo-HP.580002000\"> </a></td><td>Short columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0002097<a name=\"hpo-HP.580002097\"> </a></td><td>Emphysema</td></tr><tr><td style=\"white-space:nowrap\">HP:0002209<a name=\"hpo-HP.580002209\"> </a></td><td>Sparse scalp hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002816<a name=\"hpo-HP.580002816\"> </a></td><td>Genu recurvatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0005116<a name=\"hpo-HP.580005116\"> </a></td><td>Arterial tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0007957<a name=\"hpo-HP.580007957\"> </a></td><td>Corneal opacity</td></tr><tr><td style=\"white-space:nowrap\">HP:0008070<a name=\"hpo-HP.580008070\"> </a></td><td>Sparse hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0009623<a name=\"hpo-HP.580009623\"> </a></td><td>Proximal placement of thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0010055<a name=\"hpo-HP.580010055\"> </a></td><td>Broad hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0011318<a name=\"hpo-HP.580011318\"> </a></td><td>Bicoronal synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011968<a name=\"hpo-HP.580011968\"> </a></td><td>Feeding difficulties</td></tr><tr><td style=\"white-space:nowrap\">HP:0200067<a name=\"hpo-HP.580200067\"> </a></td><td>Recurrent spontaneous abortion</td></tr><tr><td style=\"white-space:nowrap\">HP:0011819<a name=\"hpo-HP.580011819\"> </a></td><td>Submucous cleft soft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000268<a name=\"hpo-HP.580000268\"> </a></td><td>Dolichocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0003302<a name=\"hpo-HP.580003302\"> </a></td><td>Spondylolisthesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000582<a name=\"hpo-HP.580000582\"> </a></td><td>Upslanted palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000952<a name=\"hpo-HP.580000952\"> </a></td><td>Jaundice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001298<a name=\"hpo-HP.580001298\"> </a></td><td>Encephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001396<a name=\"hpo-HP.580001396\"> </a></td><td>Cholestasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002059<a name=\"hpo-HP.580002059\"> </a></td><td>Cerebral atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002171<a name=\"hpo-HP.580002171\"> </a></td><td>Gliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002240<a name=\"hpo-HP.580002240\"> </a></td><td>Hepatomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002353<a name=\"hpo-HP.580002353\"> </a></td><td>EEG abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0002446<a name=\"hpo-HP.580002446\"> </a></td><td>Astrocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003287<a name=\"hpo-HP.580003287\"> </a></td><td>Abnormality of mitochondrial metabolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011449<a name=\"hpo-HP.580011449\"> </a></td><td>Knee clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012852<a name=\"hpo-HP.580012852\"> </a></td><td>Hepatic bridging fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100626<a name=\"hpo-HP.580100626\"> </a></td><td>Chronic hepatic failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000385<a name=\"hpo-HP.580000385\"> </a></td><td>Small earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0009748<a name=\"hpo-HP.580009748\"> </a></td><td>Large earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000157<a name=\"hpo-HP.580000157\"> </a></td><td>Abnormality of the tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0000172<a name=\"hpo-HP.580000172\"> </a></td><td>Abnormality of the uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000174<a name=\"hpo-HP.580000174\"> </a></td><td>Abnormal palate morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000306<a name=\"hpo-HP.580000306\"> </a></td><td>Abnormality of the chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0004408<a name=\"hpo-HP.580004408\"> </a></td><td>Abnormality of the sense of smell</td></tr><tr><td style=\"white-space:nowrap\">HP:0009912<a name=\"hpo-HP.580009912\"> </a></td><td>Abnormality of the tragus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000537<a name=\"hpo-HP.580000537\"> </a></td><td>Epicanthus inversus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000565<a name=\"hpo-HP.580000565\"> </a></td><td>Esotropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000752<a name=\"hpo-HP.580000752\"> </a></td><td>Hyperactivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003186<a name=\"hpo-HP.580003186\"> </a></td><td>Inverted nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0012503<a name=\"hpo-HP.580012503\"> </a></td><td>Abnormality of the pituitary gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0100710<a name=\"hpo-HP.580100710\"> </a></td><td>Impulsivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000357<a name=\"hpo-HP.580000357\"> </a></td><td>Abnormal location of ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0000820<a name=\"hpo-HP.580000820\"> </a></td><td>Abnormality of the thyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000828<a name=\"hpo-HP.580000828\"> </a></td><td>Abnormality of the parathyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000834<a name=\"hpo-HP.580000834\"> </a></td><td>Abnormality of the adrenal glands</td></tr><tr><td style=\"white-space:nowrap\">HP:0012093<a name=\"hpo-HP.580012093\"> </a></td><td>Abnormality of endocrine pancreas physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000269<a name=\"hpo-HP.580000269\"> </a></td><td>Prominent occiput</td></tr><tr><td style=\"white-space:nowrap\">HP:0000535<a name=\"hpo-HP.580000535\"> </a></td><td>Sparse and thin eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000639<a name=\"hpo-HP.580000639\"> </a></td><td>Nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000718<a name=\"hpo-HP.580000718\"> </a></td><td>Aggressive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000957<a name=\"hpo-HP.580000957\"> </a></td><td>Cafe-au-lait spot</td></tr><tr><td style=\"white-space:nowrap\">HP:0000256<a name=\"hpo-HP.580000256\"> </a></td><td>Macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000750<a name=\"hpo-HP.580000750\"> </a></td><td>Delayed speech and language development</td></tr><tr><td style=\"white-space:nowrap\">HP:0000963<a name=\"hpo-HP.580000963\"> </a></td><td>Thin skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001260<a name=\"hpo-HP.580001260\"> </a></td><td>Dysarthria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002194<a name=\"hpo-HP.580002194\"> </a></td><td>Delayed gross motor development</td></tr><tr><td style=\"white-space:nowrap\">HP:0003196<a name=\"hpo-HP.580003196\"> </a></td><td>Short nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0001155<a name=\"hpo-HP.580001155\"> </a></td><td>Abnormality of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0100022<a name=\"hpo-HP.580100022\"> </a></td><td>Abnormality of movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010862<a name=\"hpo-HP.580010862\"> </a></td><td>Delayed fine motor development</td></tr><tr><td style=\"white-space:nowrap\">HP:0000343<a name=\"hpo-HP.580000343\"> </a></td><td>Long philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000717<a name=\"hpo-HP.580000717\"> </a></td><td>Autism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001883<a name=\"hpo-HP.580001883\"> </a></td><td>Talipes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002553<a name=\"hpo-HP.580002553\"> </a></td><td>Highly arched eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0007488<a name=\"hpo-HP.580007488\"> </a></td><td>Diffuse skin atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000822<a name=\"hpo-HP.580000822\"> </a></td><td>Hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001278<a name=\"hpo-HP.580001278\"> </a></td><td>Orthostatic hypotension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001944<a name=\"hpo-HP.580001944\"> </a></td><td>Dehydration</td></tr><tr><td style=\"white-space:nowrap\">HP:0001945<a name=\"hpo-HP.580001945\"> </a></td><td>Fever</td></tr><tr><td style=\"white-space:nowrap\">HP:0002019<a name=\"hpo-HP.580002019\"> </a></td><td>Constipation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002020<a name=\"hpo-HP.580002020\"> </a></td><td>Gastroesophageal reflux</td></tr><tr><td style=\"white-space:nowrap\">HP:0002027<a name=\"hpo-HP.580002027\"> </a></td><td>Abdominal pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0002718<a name=\"hpo-HP.580002718\"> </a></td><td>Recurrent bacterial infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0002841<a name=\"hpo-HP.580002841\"> </a></td><td>Recurrent fungal infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0004395<a name=\"hpo-HP.580004395\"> </a></td><td>Malnutrition</td></tr><tr><td style=\"white-space:nowrap\">HP:0009830<a name=\"hpo-HP.580009830\"> </a></td><td>Peripheral neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000126<a name=\"hpo-HP.580000126\"> </a></td><td>Hydronephrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000519<a name=\"hpo-HP.580000519\"> </a></td><td>Developmental cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000648<a name=\"hpo-HP.580000648\"> </a></td><td>Optic atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001053<a name=\"hpo-HP.580001053\"> </a></td><td>Hypopigmented skin patches</td></tr><tr><td style=\"white-space:nowrap\">HP:0001087<a name=\"hpo-HP.580001087\"> </a></td><td>Developmental glaucoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0002119<a name=\"hpo-HP.580002119\"> </a></td><td>Ventriculomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002280<a name=\"hpo-HP.580002280\"> </a></td><td>Enlarged cisterna magna</td></tr><tr><td style=\"white-space:nowrap\">HP:0003298<a name=\"hpo-HP.580003298\"> </a></td><td>Spina bifida occulta</td></tr><tr><td style=\"white-space:nowrap\">HP:0004467<a name=\"hpo-HP.580004467\"> </a></td><td>Preauricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0008511<a name=\"hpo-HP.580008511\"> </a></td><td>Central posterior corneal opacity</td></tr><tr><td style=\"white-space:nowrap\">HP:0010780<a name=\"hpo-HP.580010780\"> </a></td><td>Hyperacusis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030048<a name=\"hpo-HP.580030048\"> </a></td><td>Colpocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0100335<a name=\"hpo-HP.580100335\"> </a></td><td>Non-midline cleft lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000525<a name=\"hpo-HP.580000525\"> </a></td><td>Abnormality iris morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002719<a name=\"hpo-HP.580002719\"> </a></td><td>Recurrent infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0000153<a name=\"hpo-HP.580000153\"> </a></td><td>Abnormality of the mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001903<a name=\"hpo-HP.580001903\"> </a></td><td>Anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002094<a name=\"hpo-HP.580002094\"> </a></td><td>Dyspnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002206<a name=\"hpo-HP.580002206\"> </a></td><td>Pulmonary fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002789<a name=\"hpo-HP.580002789\"> </a></td><td>Tachypnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002793<a name=\"hpo-HP.580002793\"> </a></td><td>Abnormal pattern of respiration</td></tr><tr><td style=\"white-space:nowrap\">HP:0003565<a name=\"hpo-HP.580003565\"> </a></td><td>Elevated erythrocyte sedimentation rate</td></tr><tr><td style=\"white-space:nowrap\">HP:0006517<a name=\"hpo-HP.580006517\"> </a></td><td>Intraalveolar phospholipid accumulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0006530<a name=\"hpo-HP.580006530\"> </a></td><td>Interstitial pulmonary abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0100759<a name=\"hpo-HP.580100759\"> </a></td><td>Clubbing of fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0002103<a name=\"hpo-HP.580002103\"> </a></td><td>Abnormal pleura morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001596<a name=\"hpo-HP.580001596\"> </a></td><td>Alopecia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001882<a name=\"hpo-HP.580001882\"> </a></td><td>Leukopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002013<a name=\"hpo-HP.580002013\"> </a></td><td>Vomiting</td></tr><tr><td style=\"white-space:nowrap\">HP:0002028<a name=\"hpo-HP.580002028\"> </a></td><td>Chronic diarrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002573<a name=\"hpo-HP.580002573\"> </a></td><td>Hematochezia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002960<a name=\"hpo-HP.580002960\"> </a></td><td>Autoimmunity</td></tr><tr><td style=\"white-space:nowrap\">HP:0005387<a name=\"hpo-HP.580005387\"> </a></td><td>Combined immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0011109<a name=\"hpo-HP.580011109\"> </a></td><td>Chronic sinusitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004429<a name=\"hpo-HP.580004429\"> </a></td><td>Recurrent viral infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0000280<a name=\"hpo-HP.580000280\"> </a></td><td>Coarse facial features</td></tr><tr><td style=\"white-space:nowrap\">HP:0000294<a name=\"hpo-HP.580000294\"> </a></td><td>Low anterior hairline</td></tr><tr><td style=\"white-space:nowrap\">HP:0000577<a name=\"hpo-HP.580000577\"> </a></td><td>Exotropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001873<a name=\"hpo-HP.580001873\"> </a></td><td>Thrombocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002011<a name=\"hpo-HP.580002011\"> </a></td><td>Morphological central nervous system abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0006610<a name=\"hpo-HP.580006610\"> </a></td><td>Wide intermamillary distance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011231<a name=\"hpo-HP.580011231\"> </a></td><td>Prominent eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0012718<a name=\"hpo-HP.580012718\"> </a></td><td>Morphological abnormality of the gastrointestinal tract</td></tr><tr><td style=\"white-space:nowrap\">HP:0002024<a name=\"hpo-HP.580002024\"> </a></td><td>Malabsorption</td></tr><tr><td style=\"white-space:nowrap\">HP:0001394<a name=\"hpo-HP.580001394\"> </a></td><td>Cirrhosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001414<a name=\"hpo-HP.580001414\"> </a></td><td>Microvesicular hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001403<a name=\"hpo-HP.580001403\"> </a></td><td>Macrovesicular hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001410<a name=\"hpo-HP.580001410\"> </a></td><td>Decreased liver function</td></tr><tr><td style=\"white-space:nowrap\">HP:0001409<a name=\"hpo-HP.580001409\"> </a></td><td>Portal hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001744<a name=\"hpo-HP.580001744\"> </a></td><td>Splenomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0003394<a name=\"hpo-HP.580003394\"> </a></td><td>Muscle spasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003750<a name=\"hpo-HP.580003750\"> </a></td><td>Increased muscle fatiguability</td></tr><tr><td style=\"white-space:nowrap\">HP:0002123<a name=\"hpo-HP.580002123\"> </a></td><td>Generalized myoclonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0002219<a name=\"hpo-HP.580002219\"> </a></td><td>Facial hypertrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000831<a name=\"hpo-HP.580000831\"> </a></td><td>Insulin-resistant diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001891<a name=\"hpo-HP.580001891\"> </a></td><td>Iron deficiency anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001264<a name=\"hpo-HP.580001264\"> </a></td><td>Spastic diplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002313<a name=\"hpo-HP.580002313\"> </a></td><td>Spastic paraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001347<a name=\"hpo-HP.580001347\"> </a></td><td>Hyperreflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002460<a name=\"hpo-HP.580002460\"> </a></td><td>Distal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000763<a name=\"hpo-HP.580000763\"> </a></td><td>Sensory neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001268<a name=\"hpo-HP.580001268\"> </a></td><td>Mental deterioration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002169<a name=\"hpo-HP.580002169\"> </a></td><td>Clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001332<a name=\"hpo-HP.580001332\"> </a></td><td>Dystonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100716<a name=\"hpo-HP.580100716\"> </a></td><td>Self-injurious behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000602<a name=\"hpo-HP.580000602\"> </a></td><td>Ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001251<a name=\"hpo-HP.580001251\"> </a></td><td>Ataxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000776<a name=\"hpo-HP.580000776\"> </a></td><td>Congenital diaphragmatic hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000410<a name=\"hpo-HP.580000410\"> </a></td><td>Mixed hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000510<a name=\"hpo-HP.580000510\"> </a></td><td>Rod-cone dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0004437<a name=\"hpo-HP.580004437\"> </a></td><td>Cranial hyperostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011001<a name=\"hpo-HP.580011001\"> </a></td><td>Increased bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0000956<a name=\"hpo-HP.580000956\"> </a></td><td>Acanthosis nigricans</td></tr><tr><td style=\"white-space:nowrap\">HP:0000958<a name=\"hpo-HP.580000958\"> </a></td><td>Dry skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000580<a name=\"hpo-HP.580000580\"> </a></td><td>Pigmentary retinopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000649<a name=\"hpo-HP.580000649\"> </a></td><td>Abnormality of visual evoked potentials</td></tr><tr><td style=\"white-space:nowrap\">HP:0000657<a name=\"hpo-HP.580000657\"> </a></td><td>Oculomotor apraxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000479<a name=\"hpo-HP.580000479\"> </a></td><td>Abnormal retinal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001317<a name=\"hpo-HP.580001317\"> </a></td><td>Abnormal cerebellum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001533<a name=\"hpo-HP.580001533\"> </a></td><td>Slender build</td></tr><tr><td style=\"white-space:nowrap\">HP:0001629<a name=\"hpo-HP.580001629\"> </a></td><td>Ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0000703<a name=\"hpo-HP.580000703\"> </a></td><td>Dentinogenesis imperfecta</td></tr><tr><td style=\"white-space:nowrap\">HP:0000914<a name=\"hpo-HP.580000914\"> </a></td><td>Shield chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0001500<a name=\"hpo-HP.580001500\"> </a></td><td>Broad finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0003086<a name=\"hpo-HP.580003086\"> </a></td><td>Acromesomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003416<a name=\"hpo-HP.580003416\"> </a></td><td>Spinal canal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002815<a name=\"hpo-HP.580002815\"> </a></td><td>Abnormality of the knee</td></tr><tr><td style=\"white-space:nowrap\">HP:0002992<a name=\"hpo-HP.580002992\"> </a></td><td>Abnormality of tibia morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001639<a name=\"hpo-HP.580001639\"> </a></td><td>Hypertrophic cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003236<a name=\"hpo-HP.580003236\"> </a></td><td>Elevated serum creatine kinase</td></tr><tr><td style=\"white-space:nowrap\">HP:0001369<a name=\"hpo-HP.580001369\"> </a></td><td>Arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003560<a name=\"hpo-HP.580003560\"> </a></td><td>Muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003974<a name=\"hpo-HP.580003974\"> </a></td><td>Absent radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0002818<a name=\"hpo-HP.580002818\"> </a></td><td>Abnormality of the radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0001561<a name=\"hpo-HP.580001561\"> </a></td><td>Polyhydramnios</td></tr><tr><td style=\"white-space:nowrap\">HP:0002299<a name=\"hpo-HP.580002299\"> </a></td><td>Brittle hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002208<a name=\"hpo-HP.580002208\"> </a></td><td>Coarse hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002213<a name=\"hpo-HP.580002213\"> </a></td><td>Fine hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000522<a name=\"hpo-HP.580000522\"> </a></td><td>Alacrima</td></tr><tr><td style=\"white-space:nowrap\">HP:0100704<a name=\"hpo-HP.580100704\"> </a></td><td>Cerebral visual impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0012713<a name=\"hpo-HP.580012713\"> </a></td><td>Moderate hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002307<a name=\"hpo-HP.580002307\"> </a></td><td>Drooling</td></tr><tr><td style=\"white-space:nowrap\">HP:0002714<a name=\"hpo-HP.580002714\"> </a></td><td>Downturned corners of mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000191<a name=\"hpo-HP.580000191\"> </a></td><td>Accessory oral frenulum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000158<a name=\"hpo-HP.580000158\"> </a></td><td>Macroglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012020<a name=\"hpo-HP.580012020\"> </a></td><td>Right aortic arch</td></tr><tr><td style=\"white-space:nowrap\">HP:0002104<a name=\"hpo-HP.580002104\"> </a></td><td>Apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0000598<a name=\"hpo-HP.580000598\"> </a></td><td>Abnormality of the ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0007874<a name=\"hpo-HP.580007874\"> </a></td><td>Almond-shaped palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0010804<a name=\"hpo-HP.580010804\"> </a></td><td>Tented upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000885<a name=\"hpo-HP.580000885\"> </a></td><td>Broad ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000768<a name=\"hpo-HP.580000768\"> </a></td><td>Pectus carinatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001680<a name=\"hpo-HP.580001680\"> </a></td><td>Coarctation of aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0000687<a name=\"hpo-HP.580000687\"> </a></td><td>Widely spaced teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000047<a name=\"hpo-HP.580000047\"> </a></td><td>Hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0001943<a name=\"hpo-HP.580001943\"> </a></td><td>Hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012369<a name=\"hpo-HP.580012369\"> </a></td><td>Abnormality of malar bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0009900<a name=\"hpo-HP.580009900\"> </a></td><td>Unilateral deafness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000023<a name=\"hpo-HP.580000023\"> </a></td><td>Inguinal hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000074<a name=\"hpo-HP.580000074\"> </a></td><td>Ureteropelvic junction obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001800<a name=\"hpo-HP.580001800\"> </a></td><td>Hypoplastic toenails</td></tr><tr><td style=\"white-space:nowrap\">HP:0001804<a name=\"hpo-HP.580001804\"> </a></td><td>Hypoplastic fingernail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002949<a name=\"hpo-HP.580002949\"> </a></td><td>Fused cervical vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0008050<a name=\"hpo-HP.580008050\"> </a></td><td>Abnormality of the palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0008577<a name=\"hpo-HP.580008577\"> </a></td><td>Underfolded helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0008589<a name=\"hpo-HP.580008589\"> </a></td><td>Hypoplastic helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0010863<a name=\"hpo-HP.580010863\"> </a></td><td>Receptive language delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0002282<a name=\"hpo-HP.580002282\"> </a></td><td>Gray matter heterotopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002085<a name=\"hpo-HP.580002085\"> </a></td><td>Occipital encephalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0001057<a name=\"hpo-HP.580001057\"> </a></td><td>Aplasia cutis congenita</td></tr><tr><td style=\"white-space:nowrap\">HP:0000211<a name=\"hpo-HP.580000211\"> </a></td><td>Trismus</td></tr><tr><td style=\"white-space:nowrap\">HP:0008422<a name=\"hpo-HP.580008422\"> </a></td><td>Vertebral wedging</td></tr><tr><td style=\"white-space:nowrap\">HP:0003170<a name=\"hpo-HP.580003170\"> </a></td><td>Abnormality of the acetabulum</td></tr><tr><td style=\"white-space:nowrap\">HP:0003272<a name=\"hpo-HP.580003272\"> </a></td><td>Abnormality of the hip bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0003028<a name=\"hpo-HP.580003028\"> </a></td><td>Abnormality of the ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0003301<a name=\"hpo-HP.580003301\"> </a></td><td>Irregular vertebral endplates</td></tr><tr><td style=\"white-space:nowrap\">HP:0010508<a name=\"hpo-HP.580010508\"> </a></td><td>Metatarsus valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0009811<a name=\"hpo-HP.580009811\"> </a></td><td>Abnormality of the elbow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000736<a name=\"hpo-HP.580000736\"> </a></td><td>Short attention span</td></tr><tr><td style=\"white-space:nowrap\">HP:0002912<a name=\"hpo-HP.580002912\"> </a></td><td>Methylmalonic acidemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001941<a name=\"hpo-HP.580001941\"> </a></td><td>Acidosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001992<a name=\"hpo-HP.580001992\"> </a></td><td>Organic aciduria</td></tr><tr><td style=\"white-space:nowrap\">HP:0009027<a name=\"hpo-HP.580009027\"> </a></td><td>Foot dorsiflexor weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002063<a name=\"hpo-HP.580002063\"> </a></td><td>Rigidity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000384<a name=\"hpo-HP.580000384\"> </a></td><td>Preauricular skin tag</td></tr><tr><td style=\"white-space:nowrap\">HP:0200046<a name=\"hpo-HP.580200046\"> </a></td><td>Cat cry</td></tr><tr><td style=\"white-space:nowrap\">HP:0001357<a name=\"hpo-HP.580001357\"> </a></td><td>Plagiocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000670<a name=\"hpo-HP.580000670\"> </a></td><td>Carious teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0011090<a name=\"hpo-HP.580011090\"> </a></td><td>Fused teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0012810<a name=\"hpo-HP.580012810\"> </a></td><td>Wide nasal base</td></tr><tr><td style=\"white-space:nowrap\">HP:0010296<a name=\"hpo-HP.580010296\"> </a></td><td>Ankyloglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001636<a name=\"hpo-HP.580001636\"> </a></td><td>Tetralogy of Fallot</td></tr><tr><td style=\"white-space:nowrap\">HP:0001305<a name=\"hpo-HP.580001305\"> </a></td><td>Dandy-Walker malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000238<a name=\"hpo-HP.580000238\"> </a></td><td>Hydrocephalus</td></tr><tr><td style=\"white-space:nowrap\">HP:0005469<a name=\"hpo-HP.580005469\"> </a></td><td>Flat occiput</td></tr><tr><td style=\"white-space:nowrap\">HP:0000270<a name=\"hpo-HP.580000270\"> </a></td><td>Delayed cranial suture closure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000239<a name=\"hpo-HP.580000239\"> </a></td><td>Large fontanelles</td></tr><tr><td style=\"white-space:nowrap\">HP:0010537<a name=\"hpo-HP.580010537\"> </a></td><td>Wide cranial sutures</td></tr><tr><td style=\"white-space:nowrap\">HP:0002217<a name=\"hpo-HP.580002217\"> </a></td><td>Slow-growing hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000587<a name=\"hpo-HP.580000587\"> </a></td><td>Abnormality of the optic nerve</td></tr><tr><td style=\"white-space:nowrap\">HP:0005989<a name=\"hpo-HP.580005989\"> </a></td><td>Redundant neck skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010775<a name=\"hpo-HP.580010775\"> </a></td><td>Vascular ring</td></tr><tr><td style=\"white-space:nowrap\">HP:0002779<a name=\"hpo-HP.580002779\"> </a></td><td>Tracheomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002827<a name=\"hpo-HP.580002827\"> </a></td><td>Hip dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001302<a name=\"hpo-HP.580001302\"> </a></td><td>Pachygyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0007362<a name=\"hpo-HP.580007362\"> </a></td><td>Aplasia/Hypoplasia of the brainstem</td></tr><tr><td style=\"white-space:nowrap\">HP:0001558<a name=\"hpo-HP.580001558\"> </a></td><td>Decreased fetal movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010878<a name=\"hpo-HP.580010878\"> </a></td><td>Fetal cystic hygroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0011398<a name=\"hpo-HP.580011398\"> </a></td><td>Central hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002071<a name=\"hpo-HP.580002071\"> </a></td><td>Abnormality of extrapyramidal motor function</td></tr><tr><td style=\"white-space:nowrap\">HP:0000826<a name=\"hpo-HP.580000826\"> </a></td><td>Precocious puberty</td></tr><tr><td style=\"white-space:nowrap\">HP:0000014<a name=\"hpo-HP.580000014\"> </a></td><td>Abnormality of the bladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0005037<a name=\"hpo-HP.580005037\"> </a></td><td>Proximal radio-ulnar synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100543<a name=\"hpo-HP.580100543\"> </a></td><td>Cognitive impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000481<a name=\"hpo-HP.580000481\"> </a></td><td>Abnormal cornea morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000076<a name=\"hpo-HP.580000076\"> </a></td><td>Vesicoureteral reflux</td></tr><tr><td style=\"white-space:nowrap\">HP:0000297<a name=\"hpo-HP.580000297\"> </a></td><td>Facial hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000391<a name=\"hpo-HP.580000391\"> </a></td><td>Thickened helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0001162<a name=\"hpo-HP.580001162\"> </a></td><td>Postaxial hand polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001385<a name=\"hpo-HP.580001385\"> </a></td><td>Hip dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002342<a name=\"hpo-HP.580002342\"> </a></td><td>Intellectual disability, moderate</td></tr><tr><td style=\"white-space:nowrap\">HP:0003191<a name=\"hpo-HP.580003191\"> </a></td><td>Cleft ala nasi</td></tr><tr><td style=\"white-space:nowrap\">HP:0009765<a name=\"hpo-HP.580009765\"> </a></td><td>Low hanging columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0010297<a name=\"hpo-HP.580010297\"> </a></td><td>Bifid tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0011330<a name=\"hpo-HP.580011330\"> </a></td><td>Metopic synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012804<a name=\"hpo-HP.580012804\"> </a></td><td>Corneal ulceration</td></tr><tr><td style=\"white-space:nowrap\">HP:0010485<a name=\"hpo-HP.580010485\"> </a></td><td>Hyperextensibility at elbow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000609<a name=\"hpo-HP.580000609\"> </a></td><td>Optic nerve hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001176<a name=\"hpo-HP.580001176\"> </a></td><td>Large hands</td></tr><tr><td style=\"white-space:nowrap\">HP:0004233<a name=\"hpo-HP.580004233\"> </a></td><td>Advanced ossification of carpal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0100842<a name=\"hpo-HP.580100842\"> </a></td><td>Septo-optic dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002034<a name=\"hpo-HP.580002034\"> </a></td><td>Abnormality of the rectum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002283<a name=\"hpo-HP.580002283\"> </a></td><td>Global brain atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003115<a name=\"hpo-HP.580003115\"> </a></td><td>Abnormal EKG</td></tr><tr><td style=\"white-space:nowrap\">HP:0002577<a name=\"hpo-HP.580002577\"> </a></td><td>Abnormal stomach morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002539<a name=\"hpo-HP.580002539\"> </a></td><td>Cortical dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006818<a name=\"hpo-HP.580006818\"> </a></td><td>4-layered lissencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000593<a name=\"hpo-HP.580000593\"> </a></td><td>Abnormal anterior chamber morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000179<a name=\"hpo-HP.580000179\"> </a></td><td>Thick lower lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002002<a name=\"hpo-HP.580002002\"> </a></td><td>Deep philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0009931<a name=\"hpo-HP.580009931\"> </a></td><td>Enlarged naris</td></tr><tr><td style=\"white-space:nowrap\">HP:0002948<a name=\"hpo-HP.580002948\"> </a></td><td>Vertebral fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002937<a name=\"hpo-HP.580002937\"> </a></td><td>Hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0002308<a name=\"hpo-HP.580002308\"> </a></td><td>Arnold-Chiari malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011320<a name=\"hpo-HP.580011320\"> </a></td><td>Unilambdoid synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002781<a name=\"hpo-HP.580002781\"> </a></td><td>Upper airway obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001363<a name=\"hpo-HP.580001363\"> </a></td><td>Craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000204<a name=\"hpo-HP.580000204\"> </a></td><td>Cleft upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001738<a name=\"hpo-HP.580001738\"> </a></td><td>Exocrine pancreatic insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002823<a name=\"hpo-HP.580002823\"> </a></td><td>Abnormality of femur morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000823<a name=\"hpo-HP.580000823\"> </a></td><td>Delayed puberty</td></tr><tr><td style=\"white-space:nowrap\">HP:0100279<a name=\"hpo-HP.580100279\"> </a></td><td>Ulcerative colitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003834<a name=\"hpo-HP.580003834\"> </a></td><td>Shoulder dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001065<a name=\"hpo-HP.580001065\"> </a></td><td>Striae distensae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000448<a name=\"hpo-HP.580000448\"> </a></td><td>Prominent nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0000554<a name=\"hpo-HP.580000554\"> </a></td><td>Uveitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001006<a name=\"hpo-HP.580001006\"> </a></td><td>obsolete Hypotrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000501<a name=\"hpo-HP.580000501\"> </a></td><td>Glaucoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000262<a name=\"hpo-HP.580000262\"> </a></td><td>Turricephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000729<a name=\"hpo-HP.580000729\"> </a></td><td>Autistic behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0010800<a name=\"hpo-HP.580010800\"> </a></td><td>Absent cupid's bow</td></tr><tr><td style=\"white-space:nowrap\">HP:0010808<a name=\"hpo-HP.580010808\"> </a></td><td>Protruding tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0009927<a name=\"hpo-HP.580009927\"> </a></td><td>Aplasia of the nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0100539<a name=\"hpo-HP.580100539\"> </a></td><td>Periorbital edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000629<a name=\"hpo-HP.580000629\"> </a></td><td>Periorbital fullness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000178<a name=\"hpo-HP.580000178\"> </a></td><td>Abnormality of lower lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000168<a name=\"hpo-HP.580000168\"> </a></td><td>Abnormality of the gingiva</td></tr><tr><td style=\"white-space:nowrap\">HP:0001022<a name=\"hpo-HP.580001022\"> </a></td><td>Albinism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000177<a name=\"hpo-HP.580000177\"> </a></td><td>Abnormality of upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001337<a name=\"hpo-HP.580001337\"> </a></td><td>Tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002135<a name=\"hpo-HP.580002135\"> </a></td><td>Basal ganglia calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0002352<a name=\"hpo-HP.580002352\"> </a></td><td>Leukoencephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002514<a name=\"hpo-HP.580002514\"> </a></td><td>Cerebral calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0010576<a name=\"hpo-HP.580010576\"> </a></td><td>Intracranial cystic lesion</td></tr><tr><td style=\"white-space:nowrap\">HP:0001622<a name=\"hpo-HP.580001622\"> </a></td><td>Premature birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002415<a name=\"hpo-HP.580002415\"> </a></td><td>Leukodystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001320<a name=\"hpo-HP.580001320\"> </a></td><td>Cerebellar vermis hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001773<a name=\"hpo-HP.580001773\"> </a></td><td>Short foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0002750<a name=\"hpo-HP.580002750\"> </a></td><td>Delayed skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004415<a name=\"hpo-HP.580004415\"> </a></td><td>Pulmonary artery stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012741<a name=\"hpo-HP.580012741\"> </a></td><td>Unilateral cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000036<a name=\"hpo-HP.580000036\"> </a></td><td>Abnormality of the penis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002408<a name=\"hpo-HP.580002408\"> </a></td><td>Cerebral arteriovenous malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0007457<a name=\"hpo-HP.580007457\"> </a></td><td>Prominent veins on trunk</td></tr><tr><td style=\"white-space:nowrap\">HP:0000378<a name=\"hpo-HP.580000378\"> </a></td><td>Cupped ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000396<a name=\"hpo-HP.580000396\"> </a></td><td>Overfolded helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000035<a name=\"hpo-HP.580000035\"> </a></td><td>Abnormal testis morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009895<a name=\"hpo-HP.580009895\"> </a></td><td>Abnormality of the crus of the helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000034<a name=\"hpo-HP.580000034\"> </a></td><td>Hydrocele testis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000722<a name=\"hpo-HP.580000722\"> </a></td><td>Obsessive-compulsive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000845<a name=\"hpo-HP.580000845\"> </a></td><td>Growth hormone excess</td></tr><tr><td style=\"white-space:nowrap\">HP:0100829<a name=\"hpo-HP.580100829\"> </a></td><td>Galactorrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001578<a name=\"hpo-HP.580001578\"> </a></td><td>Increased circulating cortisol level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000786<a name=\"hpo-HP.580000786\"> </a></td><td>Primary amenorrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001701<a name=\"hpo-HP.580001701\"> </a></td><td>Pericarditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002076<a name=\"hpo-HP.580002076\"> </a></td><td>Migraine</td></tr><tr><td style=\"white-space:nowrap\">HP:0004755<a name=\"hpo-HP.580004755\"> </a></td><td>Supraventricular tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010522<a name=\"hpo-HP.580010522\"> </a></td><td>Dyslexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004313<a name=\"hpo-HP.580004313\"> </a></td><td>Decreased circulating antibody level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000011<a name=\"hpo-HP.580000011\"> </a></td><td>Neurogenic bladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000641<a name=\"hpo-HP.580000641\"> </a></td><td>Dysmetric saccades</td></tr><tr><td style=\"white-space:nowrap\">HP:0007772<a name=\"hpo-HP.580007772\"> </a></td><td>Impaired smooth pursuit</td></tr><tr><td style=\"white-space:nowrap\">HP:0001583<a name=\"hpo-HP.580001583\"> </a></td><td>Rotary nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010544<a name=\"hpo-HP.580010544\"> </a></td><td>Vertical nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012735<a name=\"hpo-HP.580012735\"> </a></td><td>Cough</td></tr><tr><td style=\"white-space:nowrap\">HP:0002075<a name=\"hpo-HP.580002075\"> </a></td><td>Dysdiadochokinesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0007256<a name=\"hpo-HP.580007256\"> </a></td><td>Abnormal pyramidal sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0001257<a name=\"hpo-HP.580001257\"> </a></td><td>Spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002321<a name=\"hpo-HP.580002321\"> </a></td><td>Vertigo</td></tr><tr><td style=\"white-space:nowrap\">HP:0002384<a name=\"hpo-HP.580002384\"> </a></td><td>Focal impaired awareness seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011376<a name=\"hpo-HP.580011376\"> </a></td><td>Morphological abnormality of the vestibule of the inner ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0002326<a name=\"hpo-HP.580002326\"> </a></td><td>Transient ischemic attack</td></tr><tr><td style=\"white-space:nowrap\">HP:0005584<a name=\"hpo-HP.580005584\"> </a></td><td>Renal cell carcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0003124<a name=\"hpo-HP.580003124\"> </a></td><td>Hypercholesterolemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003002<a name=\"hpo-HP.580003002\"> </a></td><td>Breast carcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0004953<a name=\"hpo-HP.580004953\"> </a></td><td>obsolete Dilatation of abdominal aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0004944<a name=\"hpo-HP.580004944\"> </a></td><td>Dilatation of the cerebral artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0000100<a name=\"hpo-HP.580000100\"> </a></td><td>Nephrotic syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002783<a name=\"hpo-HP.580002783\"> </a></td><td>Recurrent lower respiratory tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0003470<a name=\"hpo-HP.580003470\"> </a></td><td>Paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006597<a name=\"hpo-HP.580006597\"> </a></td><td>Diaphragmatic paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008151<a name=\"hpo-HP.580008151\"> </a></td><td>Prolonged prothrombin time</td></tr><tr><td style=\"white-space:nowrap\">HP:0010628<a name=\"hpo-HP.580010628\"> </a></td><td>Facial palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011892<a name=\"hpo-HP.580011892\"> </a></td><td>Low levels of vitamin K</td></tr><tr><td style=\"white-space:nowrap\">HP:0001075<a name=\"hpo-HP.580001075\"> </a></td><td>Atrophic scars</td></tr><tr><td style=\"white-space:nowrap\">HP:0001816<a name=\"hpo-HP.580001816\"> </a></td><td>Thin nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002216<a name=\"hpo-HP.580002216\"> </a></td><td>Premature graying of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0003401<a name=\"hpo-HP.580003401\"> </a></td><td>Paresthesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100134<a name=\"hpo-HP.580100134\"> </a></td><td>Abnormality of the axillary hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0100797<a name=\"hpo-HP.580100797\"> </a></td><td>Toenail dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010461<a name=\"hpo-HP.580010461\"> </a></td><td>Abnormality of the male genitalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000044<a name=\"hpo-HP.580000044\"> </a></td><td>Hypogonadotropic hypogonadism</td></tr><tr><td style=\"white-space:nowrap\">HP:0100568<a name=\"hpo-HP.580100568\"> </a></td><td>Neoplasm of the endocrine system</td></tr><tr><td style=\"white-space:nowrap\">HP:0001646<a name=\"hpo-HP.580001646\"> </a></td><td>Abnormal aortic valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000813<a name=\"hpo-HP.580000813\"> </a></td><td>Bicornuate uterus</td></tr><tr><td style=\"white-space:nowrap\">HP:0004380<a name=\"hpo-HP.580004380\"> </a></td><td>Aortic valve calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0001650<a name=\"hpo-HP.580001650\"> </a></td><td>Aortic valve stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000073<a name=\"hpo-HP.580000073\"> </a></td><td>Ureteral duplication</td></tr><tr><td style=\"white-space:nowrap\">HP:0100651<a name=\"hpo-HP.580100651\"> </a></td><td>Type I diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000819<a name=\"hpo-HP.580000819\"> </a></td><td>Diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000573<a name=\"hpo-HP.580000573\"> </a></td><td>Retinal hemorrhage</td></tr><tr><td style=\"white-space:nowrap\">HP:0005264<a name=\"hpo-HP.580005264\"> </a></td><td>Abnormality of the gallbladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000475<a name=\"hpo-HP.580000475\"> </a></td><td>Broad neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000089<a name=\"hpo-HP.580000089\"> </a></td><td>Renal hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000921<a name=\"hpo-HP.580000921\"> </a></td><td>Missing ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0001789<a name=\"hpo-HP.580001789\"> </a></td><td>Hydrops fetalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002089<a name=\"hpo-HP.580002089\"> </a></td><td>Pulmonary hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003422<a name=\"hpo-HP.580003422\"> </a></td><td>Vertebral segmentation defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002323<a name=\"hpo-HP.580002323\"> </a></td><td>Anencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000341<a name=\"hpo-HP.580000341\"> </a></td><td>Narrow forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0002869<a name=\"hpo-HP.580002869\"> </a></td><td>Flared iliac wings</td></tr><tr><td style=\"white-space:nowrap\">HP:0003100<a name=\"hpo-HP.580003100\"> </a></td><td>Slender long bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0003275<a name=\"hpo-HP.580003275\"> </a></td><td>Narrow pelvis bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0009891<a name=\"hpo-HP.580009891\"> </a></td><td>Underdeveloped supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0011039<a name=\"hpo-HP.580011039\"> </a></td><td>Abnormality of the helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0008572<a name=\"hpo-HP.580008572\"> </a></td><td>External ear malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0009738<a name=\"hpo-HP.580009738\"> </a></td><td>Abnormality of the antihelix</td></tr><tr><td style=\"white-space:nowrap\">HP:0011328<a name=\"hpo-HP.580011328\"> </a></td><td>Abnormality of fontanelles</td></tr><tr><td style=\"white-space:nowrap\">HP:0012155<a name=\"hpo-HP.580012155\"> </a></td><td>Decreased corneal sensation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004602<a name=\"hpo-HP.580004602\"> </a></td><td>Cervical C2/C3 vertebral fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002997<a name=\"hpo-HP.580002997\"> </a></td><td>Abnormality of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0009777<a name=\"hpo-HP.580009777\"> </a></td><td>Absent thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002893<a name=\"hpo-HP.580002893\"> </a></td><td>Pituitary adenoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0040278<a name=\"hpo-HP.580040278\"> </a></td><td>Prolactinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001555<a name=\"hpo-HP.580001555\"> </a></td><td>Asymmetry of the thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0000902<a name=\"hpo-HP.580000902\"> </a></td><td>Rib fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002164<a name=\"hpo-HP.580002164\"> </a></td><td>Nail dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011314<a name=\"hpo-HP.580011314\"> </a></td><td>Abnormality of long bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002867<a name=\"hpo-HP.580002867\"> </a></td><td>Abnormality of the ilium</td></tr><tr><td style=\"white-space:nowrap\">HP:0000774<a name=\"hpo-HP.580000774\"> </a></td><td>Narrow chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0006482<a name=\"hpo-HP.580006482\"> </a></td><td>Abnormality of dental morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0004383<a name=\"hpo-HP.580004383\"> </a></td><td>Hypoplastic left heart</td></tr><tr><td style=\"white-space:nowrap\">HP:0002015<a name=\"hpo-HP.580002015\"> </a></td><td>Dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0500093<a name=\"hpo-HP.580500093\"> </a></td><td>Food allergy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001519<a name=\"hpo-HP.580001519\"> </a></td><td>Disproportionate tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0003179<a name=\"hpo-HP.580003179\"> </a></td><td>Protrusio acetabuli</td></tr><tr><td style=\"white-space:nowrap\">HP:0007385<a name=\"hpo-HP.580007385\"> </a></td><td>Aplasia cutis congenita of scalp</td></tr><tr><td style=\"white-space:nowrap\">HP:0000716<a name=\"hpo-HP.580000716\"> </a></td><td>Depressivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0012583<a name=\"hpo-HP.580012583\"> </a></td><td>Unilateral renal hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000618<a name=\"hpo-HP.580000618\"> </a></td><td>Blindness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001004<a name=\"hpo-HP.580001004\"> </a></td><td>Lymphedema</td></tr><tr><td style=\"white-space:nowrap\">HP:0002652<a name=\"hpo-HP.580002652\"> </a></td><td>Skeletal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012520<a name=\"hpo-HP.580012520\"> </a></td><td>Perivascular spaces</td></tr><tr><td style=\"white-space:nowrap\">HP:0005293<a name=\"hpo-HP.580005293\"> </a></td><td>Venous insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0012432<a name=\"hpo-HP.580012432\"> </a></td><td>Chronic fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002578<a name=\"hpo-HP.580002578\"> </a></td><td>Gastroparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001658<a name=\"hpo-HP.580001658\"> </a></td><td>Myocardial infarction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001802<a name=\"hpo-HP.580001802\"> </a></td><td>Absent toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0001821<a name=\"hpo-HP.580001821\"> </a></td><td>Broad nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0000807<a name=\"hpo-HP.580000807\"> </a></td><td>Glandular hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0100582<a name=\"hpo-HP.580100582\"> </a></td><td>Nasal polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002653<a name=\"hpo-HP.580002653\"> </a></td><td>Bone pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0001073<a name=\"hpo-HP.580001073\"> </a></td><td>Cigarette-paper scars</td></tr><tr><td style=\"white-space:nowrap\">HP:0031913<a name=\"hpo-HP.580031913\"> </a></td><td>Rhombencephalosynapsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002617<a name=\"hpo-HP.580002617\"> </a></td><td>Dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005107<a name=\"hpo-HP.580005107\"> </a></td><td>Abnormal sacrum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002025<a name=\"hpo-HP.580002025\"> </a></td><td>Anal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0009099<a name=\"hpo-HP.580009099\"> </a></td><td>Median cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0003212<a name=\"hpo-HP.580003212\"> </a></td><td>Increased circulating IgE level</td></tr><tr><td style=\"white-space:nowrap\">HP:0001319<a name=\"hpo-HP.580001319\"> </a></td><td>Neonatal hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002659<a name=\"hpo-HP.580002659\"> </a></td><td>Increased susceptibility to fractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0025246<a name=\"hpo-HP.580025246\"> </a></td><td>Trichilemmal cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0002107<a name=\"hpo-HP.580002107\"> </a></td><td>Pneumothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0000107<a name=\"hpo-HP.580000107\"> </a></td><td>Renal cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0001025<a name=\"hpo-HP.580001025\"> </a></td><td>Urticaria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002204<a name=\"hpo-HP.580002204\"> </a></td><td>Pulmonary embolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001058<a name=\"hpo-HP.580001058\"> </a></td><td>Poor wound healing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003010<a name=\"hpo-HP.580003010\"> </a></td><td>Prolonged bleeding time</td></tr><tr><td style=\"white-space:nowrap\">HP:0100502<a name=\"hpo-HP.580100502\"> </a></td><td>Vitamin B12 deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0100510<a name=\"hpo-HP.580100510\"> </a></td><td>Low levels of vitamin C</td></tr><tr><td style=\"white-space:nowrap\">HP:0030976<a name=\"hpo-HP.580030976\"> </a></td><td>Abnormal factor VIII activity</td></tr><tr><td style=\"white-space:nowrap\">HP:0100789<a name=\"hpo-HP.580100789\"> </a></td><td>Torus palatinus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000108<a name=\"hpo-HP.580000108\"> </a></td><td>Renal corticomedullary cysts</td></tr><tr><td style=\"white-space:nowrap\">HP:0000072<a name=\"hpo-HP.580000072\"> </a></td><td>Hydroureter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000019<a name=\"hpo-HP.580000019\"> </a></td><td>Urinary hesitancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100771<a name=\"hpo-HP.580100771\"> </a></td><td>Hypoperistalsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000021<a name=\"hpo-HP.580000021\"> </a></td><td>Megacystis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004388<a name=\"hpo-HP.580004388\"> </a></td><td>Microcolon</td></tr><tr><td style=\"white-space:nowrap\">HP:0005247<a name=\"hpo-HP.580005247\"> </a></td><td>Hypoplasia of the abdominal wall musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0004794<a name=\"hpo-HP.580004794\"> </a></td><td>Malrotation of small bowel</td></tr><tr><td style=\"white-space:nowrap\">HP:0000045<a name=\"hpo-HP.580000045\"> </a></td><td>Abnormality of the scrotum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002236<a name=\"hpo-HP.580002236\"> </a></td><td>Frontal upsweep of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000212<a name=\"hpo-HP.580000212\"> </a></td><td>Gingival overgrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001808<a name=\"hpo-HP.580001808\"> </a></td><td>Fragile nails</td></tr><tr><td style=\"white-space:nowrap\">HP:0000225<a name=\"hpo-HP.580000225\"> </a></td><td>Gingival bleeding</td></tr><tr><td style=\"white-space:nowrap\">HP:0006009<a name=\"hpo-HP.580006009\"> </a></td><td>Broad phalanx</td></tr><tr><td style=\"white-space:nowrap\">HP:0001837<a name=\"hpo-HP.580001837\"> </a></td><td>Broad toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001946<a name=\"hpo-HP.580001946\"> </a></td><td>Ketosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002490<a name=\"hpo-HP.580002490\"> </a></td><td>Increased CSF lactate</td></tr><tr><td style=\"white-space:nowrap\">HP:0002922<a name=\"hpo-HP.580002922\"> </a></td><td>Increased CSF protein</td></tr><tr><td style=\"white-space:nowrap\">HP:0003128<a name=\"hpo-HP.580003128\"> </a></td><td>Lactic acidosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003111<a name=\"hpo-HP.580003111\"> </a></td><td>Abnormal blood ion concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0032234<a name=\"hpo-HP.580032234\"> </a></td><td>Increased circulating creatine kinase MM isoform</td></tr><tr><td style=\"white-space:nowrap\">HP:0003348<a name=\"hpo-HP.580003348\"> </a></td><td>Hyperalaninemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008347<a name=\"hpo-HP.580008347\"> </a></td><td>Decreased activity of mitochondrial complex IV</td></tr><tr><td style=\"white-space:nowrap\">HP:0000326<a name=\"hpo-HP.580000326\"> </a></td><td>Abnormality of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0010758<a name=\"hpo-HP.580010758\"> </a></td><td>Abnormality of the premaxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0005681<a name=\"hpo-HP.580005681\"> </a></td><td>Juvenile rheumatoid arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000514<a name=\"hpo-HP.580000514\"> </a></td><td>Slow saccadic eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0002788<a name=\"hpo-HP.580002788\"> </a></td><td>Recurrent upper respiratory tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0003396<a name=\"hpo-HP.580003396\"> </a></td><td>Syringomyelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003011<a name=\"hpo-HP.580003011\"> </a></td><td>Abnormality of the musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0002098<a name=\"hpo-HP.580002098\"> </a></td><td>Respiratory distress</td></tr><tr><td style=\"white-space:nowrap\">HP:0002018<a name=\"hpo-HP.580002018\"> </a></td><td>Nausea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002014<a name=\"hpo-HP.580002014\"> </a></td><td>Diarrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0025168<a name=\"hpo-HP.580025168\"> </a></td><td>Left ventricular diastolic dysfunction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001679<a name=\"hpo-HP.580001679\"> </a></td><td>Abnormal aortic morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000159<a name=\"hpo-HP.580000159\"> </a></td><td>Abnormal lip morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011338<a name=\"hpo-HP.580011338\"> </a></td><td>Abnormality of mouth shape</td></tr><tr><td style=\"white-space:nowrap\">HP:0000478<a name=\"hpo-HP.580000478\"> </a></td><td>Abnormality of the eye</td></tr><tr><td style=\"white-space:nowrap\">HP:0000154<a name=\"hpo-HP.580000154\"> </a></td><td>Wide mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001513<a name=\"hpo-HP.580001513\"> </a></td><td>Obesity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002475<a name=\"hpo-HP.580002475\"> </a></td><td>Myelomeningocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0003765<a name=\"hpo-HP.580003765\"> </a></td><td>Psoriasiform dermatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010289<a name=\"hpo-HP.580010289\"> </a></td><td>Cleft of alveolar ridge of maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0003908<a name=\"hpo-HP.580003908\"> </a></td><td>Corner fracture of metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002190<a name=\"hpo-HP.580002190\"> </a></td><td>Choroid plexus cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0004370<a name=\"hpo-HP.580004370\"> </a></td><td>Abnormality of temperature regulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011611<a name=\"hpo-HP.580011611\"> </a></td><td>Interrupted aortic arch</td></tr><tr><td style=\"white-space:nowrap\">HP:0000737<a name=\"hpo-HP.580000737\"> </a></td><td>Irritability</td></tr><tr><td style=\"white-space:nowrap\">HP:0001344<a name=\"hpo-HP.580001344\"> </a></td><td>Absent speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0002376<a name=\"hpo-HP.580002376\"> </a></td><td>Developmental regression</td></tr><tr><td style=\"white-space:nowrap\">HP:0002140<a name=\"hpo-HP.580002140\"> </a></td><td>Ischemic stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0001287<a name=\"hpo-HP.580001287\"> </a></td><td>Meningitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002721<a name=\"hpo-HP.580002721\"> </a></td><td>Immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000041<a name=\"hpo-HP.580000041\"> </a></td><td>Chordee</td></tr><tr><td style=\"white-space:nowrap\">HP:0012854<a name=\"hpo-HP.580012854\"> </a></td><td>Midshaft hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0000808<a name=\"hpo-HP.580000808\"> </a></td><td>Penoscrotal hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0000048<a name=\"hpo-HP.580000048\"> </a></td><td>Bifid scrotum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001047<a name=\"hpo-HP.580001047\"> </a></td><td>Atopic dermatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001621<a name=\"hpo-HP.580001621\"> </a></td><td>Weak voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0002372<a name=\"hpo-HP.580002372\"> </a></td><td>Normal interictal EEG</td></tr><tr><td style=\"white-space:nowrap\">HP:0012803<a name=\"hpo-HP.580012803\"> </a></td><td>Anisometropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011386<a name=\"hpo-HP.580011386\"> </a></td><td>Narrow internal auditory canal</td></tr><tr><td style=\"white-space:nowrap\">HP:0012714<a name=\"hpo-HP.580012714\"> </a></td><td>Severe hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0006485<a name=\"hpo-HP.580006485\"> </a></td><td>Agenesis of incisor</td></tr><tr><td style=\"white-space:nowrap\">HP:0000787<a name=\"hpo-HP.580000787\"> </a></td><td>Nephrolithiasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011332<a name=\"hpo-HP.580011332\"> </a></td><td>Hemifacial hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001909<a name=\"hpo-HP.580001909\"> </a></td><td>Leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004808<a name=\"hpo-HP.580004808\"> </a></td><td>Acute myeloid leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006495<a name=\"hpo-HP.580006495\"> </a></td><td>Aplasia/Hypoplasia of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0001180<a name=\"hpo-HP.580001180\"> </a></td><td>Hand oligodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002991<a name=\"hpo-HP.580002991\"> </a></td><td>Abnormality of fibula morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001849<a name=\"hpo-HP.580001849\"> </a></td><td>Foot oligodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0006507<a name=\"hpo-HP.580006507\"> </a></td><td>Aplasia/hypoplasia of the humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0005613<a name=\"hpo-HP.580005613\"> </a></td><td>Aplasia/hypoplasia of the femur</td></tr><tr><td style=\"white-space:nowrap\">HP:0006492<a name=\"hpo-HP.580006492\"> </a></td><td>Aplasia/Hypoplasia of the fibula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000098<a name=\"hpo-HP.580000098\"> </a></td><td>Tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0003311<a name=\"hpo-HP.580003311\"> </a></td><td>Hypoplasia of the odontoid process</td></tr><tr><td style=\"white-space:nowrap\">HP:0005752<a name=\"hpo-HP.580005752\"> </a></td><td>Flattened moderately deformed vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0030039<a name=\"hpo-HP.580030039\"> </a></td><td>Fused thoracic vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0003304<a name=\"hpo-HP.580003304\"> </a></td><td>Spondylolysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001659<a name=\"hpo-HP.580001659\"> </a></td><td>Aortic regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002984<a name=\"hpo-HP.580002984\"> </a></td><td>Hypoplasia of the radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0009944<a name=\"hpo-HP.580009944\"> </a></td><td>Partial duplication of thumb phalanx</td></tr><tr><td style=\"white-space:nowrap\">HP:0005819<a name=\"hpo-HP.580005819\"> </a></td><td>Short middle phalanx of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0002110<a name=\"hpo-HP.580002110\"> </a></td><td>Bronchiectasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001677<a name=\"hpo-HP.580001677\"> </a></td><td>Coronary artery atherosclerosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001737<a name=\"hpo-HP.580001737\"> </a></td><td>Pancreatic cysts</td></tr><tr><td style=\"white-space:nowrap\">HP:0005113<a name=\"hpo-HP.580005113\"> </a></td><td>Aortic arch aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003022<a name=\"hpo-HP.580003022\"> </a></td><td>Hypoplasia of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0002205<a name=\"hpo-HP.580002205\"> </a></td><td>Recurrent respiratory infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0001669<a name=\"hpo-HP.580001669\"> </a></td><td>Transposition of the great arteries</td></tr><tr><td style=\"white-space:nowrap\">HP:0001716<a name=\"hpo-HP.580001716\"> </a></td><td>Wolff-Parkinson-White syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002758<a name=\"hpo-HP.580002758\"> </a></td><td>Osteoarthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002037<a name=\"hpo-HP.580002037\"> </a></td><td>Inflammation of the large intestine</td></tr><tr><td style=\"white-space:nowrap\">HP:0009892<a name=\"hpo-HP.580009892\"> </a></td><td>Anotia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011331<a name=\"hpo-HP.580011331\"> </a></td><td>Hemifacial atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0009118<a name=\"hpo-HP.580009118\"> </a></td><td>Aplasia/Hypoplasia of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0009940<a name=\"hpo-HP.580009940\"> </a></td><td>Asymmetry of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000682<a name=\"hpo-HP.580000682\"> </a></td><td>Abnormality of dental enamel</td></tr><tr><td style=\"white-space:nowrap\">HP:0009908<a name=\"hpo-HP.580009908\"> </a></td><td>Anterior creases of earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001541<a name=\"hpo-HP.580001541\"> </a></td><td>Ascites</td></tr><tr><td style=\"white-space:nowrap\">HP:0006687<a name=\"hpo-HP.580006687\"> </a></td><td>Aortic tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0010535<a name=\"hpo-HP.580010535\"> </a></td><td>Sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0100633<a name=\"hpo-HP.580100633\"> </a></td><td>Esophagitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002105<a name=\"hpo-HP.580002105\"> </a></td><td>Hemoptysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002613<a name=\"hpo-HP.580002613\"> </a></td><td>Biliary cirrhosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004469<a name=\"hpo-HP.580004469\"> </a></td><td>Chronic bronchitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002720<a name=\"hpo-HP.580002720\"> </a></td><td>Decreased circulating IgA level</td></tr><tr><td style=\"white-space:nowrap\">HP:0002904<a name=\"hpo-HP.580002904\"> </a></td><td>Hyperbilirubinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003237<a name=\"hpo-HP.580003237\"> </a></td><td>Increased circulating IgG level</td></tr><tr><td style=\"white-space:nowrap\">HP:0003262<a name=\"hpo-HP.580003262\"> </a></td><td>Smooth muscle antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0011227<a name=\"hpo-HP.580011227\"> </a></td><td>Elevated C-reactive protein level</td></tr><tr><td style=\"white-space:nowrap\">HP:0001852<a name=\"hpo-HP.580001852\"> </a></td><td>Sandal gap</td></tr><tr><td style=\"white-space:nowrap\">HP:0004381<a name=\"hpo-HP.580004381\"> </a></td><td>Supravalvular aortic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100700<a name=\"hpo-HP.580100700\"> </a></td><td>Abnormal arachnoid mater morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002624<a name=\"hpo-HP.580002624\"> </a></td><td>Abnormal venous morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002289<a name=\"hpo-HP.580002289\"> </a></td><td>Alopecia universalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0009588<a name=\"hpo-HP.580009588\"> </a></td><td>Vestibular Schwannoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001648<a name=\"hpo-HP.580001648\"> </a></td><td>Cor pulmonale</td></tr><tr><td style=\"white-space:nowrap\">HP:0002091<a name=\"hpo-HP.580002091\"> </a></td><td>Restrictive ventilatory defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002092<a name=\"hpo-HP.580002092\"> </a></td><td>Pulmonary arterial hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0002113<a name=\"hpo-HP.580002113\"> </a></td><td>Pulmonary infiltrates</td></tr><tr><td style=\"white-space:nowrap\">HP:0003138<a name=\"hpo-HP.580003138\"> </a></td><td>Increased blood urea nitrogen</td></tr><tr><td style=\"white-space:nowrap\">HP:0003259<a name=\"hpo-HP.580003259\"> </a></td><td>Elevated serum creatinine</td></tr><tr><td style=\"white-space:nowrap\">HP:0005180<a name=\"hpo-HP.580005180\"> </a></td><td>Tricuspid regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0012585<a name=\"hpo-HP.580012585\"> </a></td><td>Renal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005133<a name=\"hpo-HP.580005133\"> </a></td><td>Right ventricular dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005575<a name=\"hpo-HP.580005575\"> </a></td><td>Hemolytic-uremic syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0001697<a name=\"hpo-HP.580001697\"> </a></td><td>Abnormal pericardium morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012486<a name=\"hpo-HP.580012486\"> </a></td><td>Myelitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002385<a name=\"hpo-HP.580002385\"> </a></td><td>Paraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006706<a name=\"hpo-HP.580006706\"> </a></td><td>Cystic liver disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0010880<a name=\"hpo-HP.580010880\"> </a></td><td>Increased nuchal translucency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000457<a name=\"hpo-HP.580000457\"> </a></td><td>Depressed nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0002263<a name=\"hpo-HP.580002263\"> </a></td><td>Exaggerated cupid's bow</td></tr><tr><td style=\"white-space:nowrap\">HP:0002500<a name=\"hpo-HP.580002500\"> </a></td><td>Abnormality of the cerebral white matter</td></tr><tr><td style=\"white-space:nowrap\">HP:0002835<a name=\"hpo-HP.580002835\"> </a></td><td>Aspiration</td></tr><tr><td style=\"white-space:nowrap\">HP:0000600<a name=\"hpo-HP.580000600\"> </a></td><td>Abnormality of the pharynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0004327<a name=\"hpo-HP.580004327\"> </a></td><td>Abnormal vitreous humor morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0004378<a name=\"hpo-HP.580004378\"> </a></td><td>Abnormality of the anus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012374<a name=\"hpo-HP.580012374\"> </a></td><td>obsolete Abnormal globe morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100768<a name=\"hpo-HP.580100768\"> </a></td><td>Choriocarcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0030991<a name=\"hpo-HP.580030991\"> </a></td><td>Sclerosing cholangitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006510<a name=\"hpo-HP.580006510\"> </a></td><td>Chronic pulmonary obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0000710<a name=\"hpo-HP.580000710\"> </a></td><td>Hyperorality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001270<a name=\"hpo-HP.580001270\"> </a></td><td>Motor delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0001548<a name=\"hpo-HP.580001548\"> </a></td><td>Overgrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002311<a name=\"hpo-HP.580002311\"> </a></td><td>Incoordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0006288<a name=\"hpo-HP.580006288\"> </a></td><td>Advanced eruption of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0006323<a name=\"hpo-HP.580006323\"> </a></td><td>Premature loss of primary teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009890<a name=\"hpo-HP.580009890\"> </a></td><td>High anterior hairline</td></tr><tr><td style=\"white-space:nowrap\">HP:0100034<a name=\"hpo-HP.580100034\"> </a></td><td>Motor tics</td></tr><tr><td style=\"white-space:nowrap\">HP:0100035<a name=\"hpo-HP.580100035\"> </a></td><td>Phonic tics</td></tr><tr><td style=\"white-space:nowrap\">HP:0000348<a name=\"hpo-HP.580000348\"> </a></td><td>High forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0001520<a name=\"hpo-HP.580001520\"> </a></td><td>Large for gestational age</td></tr><tr><td style=\"white-space:nowrap\">HP:0001239<a name=\"hpo-HP.580001239\"> </a></td><td>Wrist flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0007359<a name=\"hpo-HP.580007359\"> </a></td><td>Focal-onset seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000430<a name=\"hpo-HP.580000430\"> </a></td><td>Underdeveloped nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0007400<a name=\"hpo-HP.580007400\"> </a></td><td>Irregular hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0100495<a name=\"hpo-HP.580100495\"> </a></td><td>Mastocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012378<a name=\"hpo-HP.580012378\"> </a></td><td>Fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002046<a name=\"hpo-HP.580002046\"> </a></td><td>Heat intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0003270<a name=\"hpo-HP.580003270\"> </a></td><td>Abdominal distention</td></tr><tr><td style=\"white-space:nowrap\">HP:0002180<a name=\"hpo-HP.580002180\"> </a></td><td>Neurodegeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0003493<a name=\"hpo-HP.580003493\"> </a></td><td>Antinuclear antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0030057<a name=\"hpo-HP.580030057\"> </a></td><td>Autoimmune antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0006802<a name=\"hpo-HP.580006802\"> </a></td><td>Abnormal anterior horn cell morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000064<a name=\"hpo-HP.580000064\"> </a></td><td>Hypoplastic labia minora</td></tr><tr><td style=\"white-space:nowrap\">HP:0000338<a name=\"hpo-HP.580000338\"> </a></td><td>Hypomimic face</td></tr><tr><td style=\"white-space:nowrap\">HP:0001642<a name=\"hpo-HP.580001642\"> </a></td><td>Pulmonic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011344<a name=\"hpo-HP.580011344\"> </a></td><td>Severe global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0200007<a name=\"hpo-HP.580200007\"> </a></td><td>Abnormal size of the palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0004464<a name=\"hpo-HP.580004464\"> </a></td><td>Postauricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0000130<a name=\"hpo-HP.580000130\"> </a></td><td>Abnormality of the uterus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000137<a name=\"hpo-HP.580000137\"> </a></td><td>Abnormality of the ovary</td></tr><tr><td style=\"white-space:nowrap\">HP:0000142<a name=\"hpo-HP.580000142\"> </a></td><td>Abnormal vagina morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000370<a name=\"hpo-HP.580000370\"> </a></td><td>Abnormality of the middle ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0011787<a name=\"hpo-HP.580011787\"> </a></td><td>Central hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000274<a name=\"hpo-HP.580000274\"> </a></td><td>Small face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000446<a name=\"hpo-HP.580000446\"> </a></td><td>Narrow nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000622<a name=\"hpo-HP.580000622\"> </a></td><td>Blurred vision</td></tr><tr><td style=\"white-space:nowrap\">HP:0001245<a name=\"hpo-HP.580001245\"> </a></td><td>Small thenar eminence</td></tr><tr><td style=\"white-space:nowrap\">HP:0009601<a name=\"hpo-HP.580009601\"> </a></td><td>Aplasia/Hypoplasia of the thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0011343<a name=\"hpo-HP.580011343\"> </a></td><td>Moderate global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0000419<a name=\"hpo-HP.580000419\"> </a></td><td>Abnormality of the nasal septum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000502<a name=\"hpo-HP.580000502\"> </a></td><td>Abnormal conjunctiva morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000591<a name=\"hpo-HP.580000591\"> </a></td><td>Abnormal sclera morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000615<a name=\"hpo-HP.580000615\"> </a></td><td>Abnormal pupil morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001163<a name=\"hpo-HP.580001163\"> </a></td><td>Abnormality of the metacarpal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0001832<a name=\"hpo-HP.580001832\"> </a></td><td>Abnormal metatarsal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001850<a name=\"hpo-HP.580001850\"> </a></td><td>Abnormality of the tarsal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0010490<a name=\"hpo-HP.580010490\"> </a></td><td>Abnormality of the palmar creases</td></tr><tr><td style=\"white-space:nowrap\">HP:0010881<a name=\"hpo-HP.580010881\"> </a></td><td>Abnormality of the umbilical cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0009113<a name=\"hpo-HP.580009113\"> </a></td><td>Diaphragmatic weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0011664<a name=\"hpo-HP.580011664\"> </a></td><td>Left ventricular noncompaction cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100240<a name=\"hpo-HP.580100240\"> </a></td><td>Synostosis of joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0001838<a name=\"hpo-HP.580001838\"> </a></td><td>Rocker bottom foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0003717<a name=\"hpo-HP.580003717\"> </a></td><td>Minimal subcutaneous fat</td></tr><tr><td style=\"white-space:nowrap\">HP:0001339<a name=\"hpo-HP.580001339\"> </a></td><td>Lissencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001591<a name=\"hpo-HP.580001591\"> </a></td><td>Bell-shaped thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0002655<a name=\"hpo-HP.580002655\"> </a></td><td>Spondyloepiphyseal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002983<a name=\"hpo-HP.580002983\"> </a></td><td>Micromelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003016<a name=\"hpo-HP.580003016\"> </a></td><td>Metaphyseal widening</td></tr><tr><td style=\"white-space:nowrap\">HP:0009826<a name=\"hpo-HP.580009826\"> </a></td><td>Limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0004488<a name=\"hpo-HP.580004488\"> </a></td><td>Macrocephaly at birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001695<a name=\"hpo-HP.580001695\"> </a></td><td>Cardiac arrest</td></tr><tr><td style=\"white-space:nowrap\">HP:0001712<a name=\"hpo-HP.580001712\"> </a></td><td>Left ventricular hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100775<a name=\"hpo-HP.580100775\"> </a></td><td>Dural ectasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000846<a name=\"hpo-HP.580000846\"> </a></td><td>Adrenal insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002925<a name=\"hpo-HP.580002925\"> </a></td><td>Increased thyroid-stimulating hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0100646<a name=\"hpo-HP.580100646\"> </a></td><td>Thyroiditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000836<a name=\"hpo-HP.580000836\"> </a></td><td>Hyperthyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0004414<a name=\"hpo-HP.580004414\"> </a></td><td>Abnormality of the pulmonary artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0000465<a name=\"hpo-HP.580000465\"> </a></td><td>Webbed neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000723<a name=\"hpo-HP.580000723\"> </a></td><td>Restrictive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0002253<a name=\"hpo-HP.580002253\"> </a></td><td>Colonic diverticula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001310<a name=\"hpo-HP.580001310\"> </a></td><td>Dysmetria</td></tr><tr><td style=\"white-space:nowrap\">HP:0000093<a name=\"hpo-HP.580000093\"> </a></td><td>Proteinuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002907<a name=\"hpo-HP.580002907\"> </a></td><td>Microscopic hematuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0003073<a name=\"hpo-HP.580003073\"> </a></td><td>Hypoalbuminemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004315<a name=\"hpo-HP.580004315\"> </a></td><td>Decreased circulating IgG level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000795<a name=\"hpo-HP.580000795\"> </a></td><td>Abnormality of the urethra</td></tr><tr><td style=\"white-space:nowrap\">HP:0001015<a name=\"hpo-HP.580001015\"> </a></td><td>Prominent superficial veins</td></tr><tr><td style=\"white-space:nowrap\">HP:0004691<a name=\"hpo-HP.580004691\"> </a></td><td>2-3 toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005328<a name=\"hpo-HP.580005328\"> </a></td><td>Progeroid facial appearance</td></tr><tr><td style=\"white-space:nowrap\">HP:0005487<a name=\"hpo-HP.580005487\"> </a></td><td>Prominent metopic ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0007552<a name=\"hpo-HP.580007552\"> </a></td><td>Abnormal subcutaneous fat tissue distribution</td></tr><tr><td style=\"white-space:nowrap\">HP:0100678<a name=\"hpo-HP.580100678\"> </a></td><td>Premature skin wrinkling</td></tr><tr><td style=\"white-space:nowrap\">HP:0031137<a name=\"hpo-HP.580031137\"> </a></td><td>Storage in hepatocytes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002521<a name=\"hpo-HP.580002521\"> </a></td><td>Hypsarrhythmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005390<a name=\"hpo-HP.580005390\"> </a></td><td>Recurrent opportunistic infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0002716<a name=\"hpo-HP.580002716\"> </a></td><td>Lymphadenopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005379<a name=\"hpo-HP.580005379\"> </a></td><td>obsolete Severe T lymphocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004432<a name=\"hpo-HP.580004432\"> </a></td><td>Agammaglobulinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006695<a name=\"hpo-HP.580006695\"> </a></td><td>Atrioventricular canal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0001733<a name=\"hpo-HP.580001733\"> </a></td><td>Pancreatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002350<a name=\"hpo-HP.580002350\"> </a></td><td>Cerebellar cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0012110<a name=\"hpo-HP.580012110\"> </a></td><td>Hypoplasia of the pons</td></tr><tr><td style=\"white-space:nowrap\">HP:0001948<a name=\"hpo-HP.580001948\"> </a></td><td>Alkalosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003113<a name=\"hpo-HP.580003113\"> </a></td><td>Hypochloremia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003155<a name=\"hpo-HP.580003155\"> </a></td><td>Elevated alkaline phosphatase</td></tr><tr><td style=\"white-space:nowrap\">HP:0003542<a name=\"hpo-HP.580003542\"> </a></td><td>Increased serum pyruvate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000421<a name=\"hpo-HP.580000421\"> </a></td><td>Epistaxis</td></tr><tr><td style=\"white-space:nowrap\">HP:0200136<a name=\"hpo-HP.580200136\"> </a></td><td>Oral-pharyngeal dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000805<a name=\"hpo-HP.580000805\"> </a></td><td>Enuresis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005616<a name=\"hpo-HP.580005616\"> </a></td><td>Accelerated skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002459<a name=\"hpo-HP.580002459\"> </a></td><td>obsolete Dysautonomia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007302<a name=\"hpo-HP.580007302\"> </a></td><td>Bipolar affective disorder</td></tr><tr><td style=\"white-space:nowrap\">HP:0100602<a name=\"hpo-HP.580100602\"> </a></td><td>Preeclampsia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100508<a name=\"hpo-HP.580100508\"> </a></td><td>Abnormality of vitamin metabolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001140<a name=\"hpo-HP.580001140\"> </a></td><td>Limbal dermoid</td></tr><tr><td style=\"white-space:nowrap\">HP:0000143<a name=\"hpo-HP.580000143\"> </a></td><td>Rectovaginal fistula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001746<a name=\"hpo-HP.580001746\"> </a></td><td>Asplenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012715<a name=\"hpo-HP.580012715\"> </a></td><td>Profound hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001748<a name=\"hpo-HP.580001748\"> </a></td><td>Polysplenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003072<a name=\"hpo-HP.580003072\"> </a></td><td>Hypercalcemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002905<a name=\"hpo-HP.580002905\"> </a></td><td>Hyperphosphatemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002901<a name=\"hpo-HP.580002901\"> </a></td><td>Hypocalcemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001367<a name=\"hpo-HP.580001367\"> </a></td><td>Abnormal joint morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0010562<a name=\"hpo-HP.580010562\"> </a></td><td>Keloids</td></tr><tr><td style=\"white-space:nowrap\">HP:0004430<a name=\"hpo-HP.580004430\"> </a></td><td>Severe combined immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000003<a name=\"hpo-HP.580000003\"> </a></td><td>Multicystic kidney dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010980<a name=\"hpo-HP.580010980\"> </a></td><td>Hyperlipoproteinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002155<a name=\"hpo-HP.580002155\"> </a></td><td>Hypertriglyceridemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000520<a name=\"hpo-HP.580000520\"> </a></td><td>Proptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000180<a name=\"hpo-HP.580000180\"> </a></td><td>Lobulated tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0005486<a name=\"hpo-HP.580005486\"> </a></td><td>Small fontanelle</td></tr><tr><td style=\"white-space:nowrap\">HP:0000891<a name=\"hpo-HP.580000891\"> </a></td><td>Cervical ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002557<a name=\"hpo-HP.580002557\"> </a></td><td>Hypoplastic nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0009112<a name=\"hpo-HP.580009112\"> </a></td><td>Aplasia of the left hemidiaphragm</td></tr><tr><td style=\"white-space:nowrap\">HP:0001719<a name=\"hpo-HP.580001719\"> </a></td><td>Double outlet right ventricle</td></tr><tr><td style=\"white-space:nowrap\">HP:0001682<a name=\"hpo-HP.580001682\"> </a></td><td>Subvalvular aortic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001667<a name=\"hpo-HP.580001667\"> </a></td><td>Right ventricular hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002101<a name=\"hpo-HP.580002101\"> </a></td><td>Abnormal lung lobation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002202<a name=\"hpo-HP.580002202\"> </a></td><td>Pleural effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002566<a name=\"hpo-HP.580002566\"> </a></td><td>Intestinal malrotation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004510<a name=\"hpo-HP.580004510\"> </a></td><td>Pancreatic islet-cell hyperplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001747<a name=\"hpo-HP.580001747\"> </a></td><td>Accessory spleen</td></tr><tr><td style=\"white-space:nowrap\">HP:0002181<a name=\"hpo-HP.580002181\"> </a></td><td>Cerebral edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000967<a name=\"hpo-HP.580000967\"> </a></td><td>Petechiae</td></tr><tr><td style=\"white-space:nowrap\">HP:0009702<a name=\"hpo-HP.580009702\"> </a></td><td>Carpal synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000927<a name=\"hpo-HP.580000927\"> </a></td><td>Abnormality of skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004348<a name=\"hpo-HP.580004348\"> </a></td><td>Abnormality of bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0003019<a name=\"hpo-HP.580003019\"> </a></td><td>Abnormality of the wrist</td></tr><tr><td style=\"white-space:nowrap\">HP:0003063<a name=\"hpo-HP.580003063\"> </a></td><td>Abnormality of the humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001059<a name=\"hpo-HP.580001059\"> </a></td><td>Pterygium</td></tr><tr><td style=\"white-space:nowrap\">HP:0001528<a name=\"hpo-HP.580001528\"> </a></td><td>Hemihypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011228<a name=\"hpo-HP.580011228\"> </a></td><td>Horizontal eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000766<a name=\"hpo-HP.580000766\"> </a></td><td>Abnormality of the sternum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001254<a name=\"hpo-HP.580001254\"> </a></td><td>Lethargy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002360<a name=\"hpo-HP.580002360\"> </a></td><td>Sleep disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0001063<a name=\"hpo-HP.580001063\"> </a></td><td>Acrocyanosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001769<a name=\"hpo-HP.580001769\"> </a></td><td>Broad foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0010280<a name=\"hpo-HP.580010280\"> </a></td><td>Stomatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001288<a name=\"hpo-HP.580001288\"> </a></td><td>Gait disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0008330<a name=\"hpo-HP.580008330\"> </a></td><td>Reduced von Willebrand factor activity</td></tr><tr><td style=\"white-space:nowrap\">HP:0001954<a name=\"hpo-HP.580001954\"> </a></td><td>Recurrent fever</td></tr><tr><td style=\"white-space:nowrap\">HP:0004311<a name=\"hpo-HP.580004311\"> </a></td><td>Abnormal macrophage morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012539<a name=\"hpo-HP.580012539\"> </a></td><td>Non-Hodgkin lymphoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0002074<a name=\"hpo-HP.580002074\"> </a></td><td>Increased neuronal autofluorescent lipopigment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002973<a name=\"hpo-HP.580002973\"> </a></td><td>Abnormality of the forearm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003203<a name=\"hpo-HP.580003203\"> </a></td><td>Impaired oxidative burst</td></tr><tr><td style=\"white-space:nowrap\">HP:0003027<a name=\"hpo-HP.580003027\"> </a></td><td>Mesomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002754<a name=\"hpo-HP.580002754\"> </a></td><td>Osteomyelitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004431<a name=\"hpo-HP.580004431\"> </a></td><td>Complement deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0001258<a name=\"hpo-HP.580001258\"> </a></td><td>Spastic paraplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012811<a name=\"hpo-HP.580012811\"> </a></td><td>Wide nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0011832<a name=\"hpo-HP.580011832\"> </a></td><td>Narrow nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000288<a name=\"hpo-HP.580000288\"> </a></td><td>Abnormality of the philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002357<a name=\"hpo-HP.580002357\"> </a></td><td>Dysphasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000871<a name=\"hpo-HP.580000871\"> </a></td><td>Panhypopituitarism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000233<a name=\"hpo-HP.580000233\"> </a></td><td>Thin vermilion border</td></tr><tr><td style=\"white-space:nowrap\">HP:0003281<a name=\"hpo-HP.580003281\"> </a></td><td>Increased serum ferritin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010752<a name=\"hpo-HP.580010752\"> </a></td><td>Cleft mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000437<a name=\"hpo-HP.580000437\"> </a></td><td>Depressed nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000453<a name=\"hpo-HP.580000453\"> </a></td><td>Choanal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000863<a name=\"hpo-HP.580000863\"> </a></td><td>Central diabetes insipidus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000058<a name=\"hpo-HP.580000058\"> </a></td><td>Abnormality of the labia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007418<a name=\"hpo-HP.580007418\"> </a></td><td>Alopecia totalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100765<a name=\"hpo-HP.580100765\"> </a></td><td>Abnormality of the tonsils</td></tr><tr><td style=\"white-space:nowrap\">HP:0100747<a name=\"hpo-HP.580100747\"> </a></td><td>Macrodactyly of toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002109<a name=\"hpo-HP.580002109\"> </a></td><td>obsolete Abnormality of the bronchi</td></tr><tr><td style=\"white-space:nowrap\">HP:0011950<a name=\"hpo-HP.580011950\"> </a></td><td>Bronchiolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002850<a name=\"hpo-HP.580002850\"> </a></td><td>Decreased circulating total IgM</td></tr><tr><td style=\"white-space:nowrap\">HP:0001395<a name=\"hpo-HP.580001395\"> </a></td><td>Hepatic fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010701<a name=\"hpo-HP.580010701\"> </a></td><td>Abnormal immunoglobulin level</td></tr><tr><td style=\"white-space:nowrap\">HP:0009928<a name=\"hpo-HP.580009928\"> </a></td><td>Thick nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0010807<a name=\"hpo-HP.580010807\"> </a></td><td>Open bite</td></tr><tr><td style=\"white-space:nowrap\">HP:0002126<a name=\"hpo-HP.580002126\"> </a></td><td>Polymicrogyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002900<a name=\"hpo-HP.580002900\"> </a></td><td>Hypokalemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000155<a name=\"hpo-HP.580000155\"> </a></td><td>Oral ulcer</td></tr><tr><td style=\"white-space:nowrap\">HP:0000135<a name=\"hpo-HP.580000135\"> </a></td><td>Hypogonadism</td></tr><tr><td style=\"white-space:nowrap\">HP:0100783<a name=\"hpo-HP.580100783\"> </a></td><td>Breast aplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000336<a name=\"hpo-HP.580000336\"> </a></td><td>Prominent supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0010557<a name=\"hpo-HP.580010557\"> </a></td><td>Overlapping fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0005100<a name=\"hpo-HP.580005100\"> </a></td><td>Premature birth following premature rupture of fetal membranes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002594<a name=\"hpo-HP.580002594\"> </a></td><td>Pancreatic hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010109<a name=\"hpo-HP.580010109\"> </a></td><td>Short hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0002334<a name=\"hpo-HP.580002334\"> </a></td><td>Abnormality of the cerebellar vermis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003326<a name=\"hpo-HP.580003326\"> </a></td><td>Myalgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001645<a name=\"hpo-HP.580001645\"> </a></td><td>Sudden cardiac death</td></tr><tr><td style=\"white-space:nowrap\">HP:0001612<a name=\"hpo-HP.580001612\"> </a></td><td>Weak cry</td></tr><tr><td style=\"white-space:nowrap\">HP:0001618<a name=\"hpo-HP.580001618\"> </a></td><td>Dysphonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001336<a name=\"hpo-HP.580001336\"> </a></td><td>Myoclonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001283<a name=\"hpo-HP.580001283\"> </a></td><td>Bulbar palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002080<a name=\"hpo-HP.580002080\"> </a></td><td>Intention tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002174<a name=\"hpo-HP.580002174\"> </a></td><td>Postural tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002064<a name=\"hpo-HP.580002064\"> </a></td><td>Spastic gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0009800<a name=\"hpo-HP.580009800\"> </a></td><td>Maternal diabetes</td></tr><tr><td style=\"white-space:nowrap\">HP:0001662<a name=\"hpo-HP.580001662\"> </a></td><td>Bradycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006595<a name=\"hpo-HP.580006595\"> </a></td><td>Scapulohumeral synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005815<a name=\"hpo-HP.580005815\"> </a></td><td>Supernumerary ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000307<a name=\"hpo-HP.580000307\"> </a></td><td>Pointed chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0012371<a name=\"hpo-HP.580012371\"> </a></td><td>Hyperplasia of midface</td></tr><tr><td style=\"white-space:nowrap\">HP:0002643<a name=\"hpo-HP.580002643\"> </a></td><td>Neonatal respiratory distress</td></tr><tr><td style=\"white-space:nowrap\">HP:0002093<a name=\"hpo-HP.580002093\"> </a></td><td>Respiratory insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0010310<a name=\"hpo-HP.580010310\"> </a></td><td>Chylothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0006376<a name=\"hpo-HP.580006376\"> </a></td><td>Limited elbow flexion</td></tr><tr><td style=\"white-space:nowrap\">HP:0006467<a name=\"hpo-HP.580006467\"> </a></td><td>Limited shoulder movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010505<a name=\"hpo-HP.580010505\"> </a></td><td>Limitation of movement at ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0010501<a name=\"hpo-HP.580010501\"> </a></td><td>Limitation of knee mobility</td></tr><tr><td style=\"white-space:nowrap\">HP:0009896<a name=\"hpo-HP.580009896\"> </a></td><td>Abnormality of the antitragus</td></tr><tr><td style=\"white-space:nowrap\">HP:0004404<a name=\"hpo-HP.580004404\"> </a></td><td>Abnormal nipple morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011957<a name=\"hpo-HP.580011957\"> </a></td><td>Abnormal pectoral muscle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000777<a name=\"hpo-HP.580000777\"> </a></td><td>Abnormality of the thymus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000418<a name=\"hpo-HP.580000418\"> </a></td><td>Narrow nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0001572<a name=\"hpo-HP.580001572\"> </a></td><td>Macrodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002967<a name=\"hpo-HP.580002967\"> </a></td><td>Cubitus valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000988<a name=\"hpo-HP.580000988\"> </a></td><td>Skin rash</td></tr><tr><td style=\"white-space:nowrap\">HP:0009733<a name=\"hpo-HP.580009733\"> </a></td><td>Glioma</td></tr><tr><td style=\"white-space:nowrap\">HP:0012452<a name=\"hpo-HP.580012452\"> </a></td><td>Restless legs</td></tr><tr><td style=\"white-space:nowrap\">HP:0100031<a name=\"hpo-HP.580100031\"> </a></td><td>Neoplasm of the thyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0030127<a name=\"hpo-HP.580030127\"> </a></td><td>Endometriosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000123<a name=\"hpo-HP.580000123\"> </a></td><td>Nephritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001974<a name=\"hpo-HP.580001974\"> </a></td><td>Leukocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010976<a name=\"hpo-HP.580010976\"> </a></td><td>B lymphocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000010<a name=\"hpo-HP.580000010\"> </a></td><td>Recurrent urinary tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0100807<a name=\"hpo-HP.580100807\"> </a></td><td>Long fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0000653<a name=\"hpo-HP.580000653\"> </a></td><td>Sparse eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0000171<a name=\"hpo-HP.580000171\"> </a></td><td>Microglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002575<a name=\"hpo-HP.580002575\"> </a></td><td>Tracheoesophageal fistula</td></tr><tr><td style=\"white-space:nowrap\">HP:0009933<a name=\"hpo-HP.580009933\"> </a></td><td>Narrow naris</td></tr><tr><td style=\"white-space:nowrap\">HP:0000883<a name=\"hpo-HP.580000883\"> </a></td><td>Thin ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000121<a name=\"hpo-HP.580000121\"> </a></td><td>Nephrocalcinosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001349<a name=\"hpo-HP.580001349\"> </a></td><td>Facial diplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012037<a name=\"hpo-HP.580012037\"> </a></td><td>Pectoralis amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100560<a name=\"hpo-HP.580100560\"> </a></td><td>Upper limb asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0005684<a name=\"hpo-HP.580005684\"> </a></td><td>Distal arthrogryposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010722<a name=\"hpo-HP.580010722\"> </a></td><td>Asymmetry of the ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0009380<a name=\"hpo-HP.580009380\"> </a></td><td>Aplasia of the fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0001657<a name=\"hpo-HP.580001657\"> </a></td><td>Prolonged QT interval</td></tr><tr><td style=\"white-space:nowrap\">HP:0002040<a name=\"hpo-HP.580002040\"> </a></td><td>Esophageal varix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000613<a name=\"hpo-HP.580000613\"> </a></td><td>Photophobia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000561<a name=\"hpo-HP.580000561\"> </a></td><td>Absent eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002223<a name=\"hpo-HP.580002223\"> </a></td><td>Absent eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0002591<a name=\"hpo-HP.580002591\"> </a></td><td>Polyphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002373<a name=\"hpo-HP.580002373\"> </a></td><td>Febrile seizure (within the age range of 3 months to 6 years)</td></tr><tr><td style=\"white-space:nowrap\">HP:0002419<a name=\"hpo-HP.580002419\"> </a></td><td>Molar tooth sign on MRI</td></tr><tr><td style=\"white-space:nowrap\">HP:0001010<a name=\"hpo-HP.580001010\"> </a></td><td>Hypopigmentation of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0005772<a name=\"hpo-HP.580005772\"> </a></td><td>Aplasia/Hypoplasia of the tibia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002211<a name=\"hpo-HP.580002211\"> </a></td><td>White forelock</td></tr><tr><td style=\"white-space:nowrap\">HP:0007126<a name=\"hpo-HP.580007126\"> </a></td><td>Proximal amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003798<a name=\"hpo-HP.580003798\"> </a></td><td>Nemaline bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0006533<a name=\"hpo-HP.580006533\"> </a></td><td>Bronchodysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003391<a name=\"hpo-HP.580003391\"> </a></td><td>Gowers sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0000771<a name=\"hpo-HP.580000771\"> </a></td><td>Gynecomastia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100785<a name=\"hpo-HP.580100785\"> </a></td><td>Insomnia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010529<a name=\"hpo-HP.580010529\"> </a></td><td>Echolalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000363<a name=\"hpo-HP.580000363\"> </a></td><td>Abnormality of earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002612<a name=\"hpo-HP.580002612\"> </a></td><td>Congenital hepatic fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006721<a name=\"hpo-HP.580006721\"> </a></td><td>Acute lymphoblastic leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001958<a name=\"hpo-HP.580001958\"> </a></td><td>Nonketotic hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003457<a name=\"hpo-HP.580003457\"> </a></td><td>EMG abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0010636<a name=\"hpo-HP.580010636\"> </a></td><td>Schizencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005266<a name=\"hpo-HP.580005266\"> </a></td><td>Intestinal polyp</td></tr><tr><td style=\"white-space:nowrap\">HP:0200063<a name=\"hpo-HP.580200063\"> </a></td><td>Colorectal polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001762<a name=\"hpo-HP.580001762\"> </a></td><td>Talipes equinovarus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000056<a name=\"hpo-HP.580000056\"> </a></td><td>Abnormality of the clitoris</td></tr><tr><td style=\"white-space:nowrap\">HP:0008655<a name=\"hpo-HP.580008655\"> </a></td><td>Aplasia/Hypoplasia of the fallopian tube</td></tr><tr><td style=\"white-space:nowrap\">HP:0002072<a name=\"hpo-HP.580002072\"> </a></td><td>Chorea</td></tr><tr><td style=\"white-space:nowrap\">HP:0008734<a name=\"hpo-HP.580008734\"> </a></td><td>Decreased testicular size</td></tr><tr><td style=\"white-space:nowrap\">HP:0002136<a name=\"hpo-HP.580002136\"> </a></td><td>Broad-based gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0010958<a name=\"hpo-HP.580010958\"> </a></td><td>Bilateral renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002510<a name=\"hpo-HP.580002510\"> </a></td><td>Spastic tetraplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003234<a name=\"hpo-HP.580003234\"> </a></td><td>Decreased plasma carnitine</td></tr><tr><td style=\"white-space:nowrap\">HP:0000720<a name=\"hpo-HP.580000720\"> </a></td><td>Mood swings</td></tr><tr><td style=\"white-space:nowrap\">HP:0012638<a name=\"hpo-HP.580012638\"> </a></td><td>Abnormal nervous system physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002803<a name=\"hpo-HP.580002803\"> </a></td><td>Congenital contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0000152<a name=\"hpo-HP.580000152\"> </a></td><td>Abnormality of head or neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0004377<a name=\"hpo-HP.580004377\"> </a></td><td>Hematological neoplasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0100006<a name=\"hpo-HP.580100006\"> </a></td><td>Neoplasm of the central nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0012759<a name=\"hpo-HP.580012759\"> </a></td><td>Neurodevelopmental abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0011805<a name=\"hpo-HP.580011805\"> </a></td><td>Abnormal skeletal muscle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003634<a name=\"hpo-HP.580003634\"> </a></td><td>Amyoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001507<a name=\"hpo-HP.580001507\"> </a></td><td>Growth abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001939<a name=\"hpo-HP.580001939\"> </a></td><td>Abnormality of metabolism/homeostasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011013<a name=\"hpo-HP.580011013\"> </a></td><td>Abnormal circulating carbohydrate concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0410008<a name=\"hpo-HP.580410008\"> </a></td><td>Abnormality of the peripheral nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0200134<a name=\"hpo-HP.580200134\"> </a></td><td>Epileptic encephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001881<a name=\"hpo-HP.580001881\"> </a></td><td>Abnormal leukocyte morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0005549<a name=\"hpo-HP.580005549\"> </a></td><td>obsolete Congenital neutropenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004439<a name=\"hpo-HP.580004439\"> </a></td><td>Craniofacial dysostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012443<a name=\"hpo-HP.580012443\"> </a></td><td>Abnormality of brain morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000202<a name=\"hpo-HP.580000202\"> </a></td><td>Oral cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0011842<a name=\"hpo-HP.580011842\"> </a></td><td>Abnormality of skeletal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003808<a name=\"hpo-HP.580003808\"> </a></td><td>Abnormal muscle tone</td></tr><tr><td style=\"white-space:nowrap\">HP:0001574<a name=\"hpo-HP.580001574\"> </a></td><td>Abnormality of the integument</td></tr><tr><td style=\"white-space:nowrap\">HP:0030056<a name=\"hpo-HP.580030056\"> </a></td><td>Uncombable hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0003549<a name=\"hpo-HP.580003549\"> </a></td><td>Abnormality of connective tissue</td></tr><tr><td style=\"white-space:nowrap\">HP:0030875<a name=\"hpo-HP.580030875\"> </a></td><td>Abnormality of pulmonary circulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000118<a name=\"hpo-HP.580000118\"> </a></td><td>Phenotypic abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0012469<a name=\"hpo-HP.580012469\"> </a></td><td>Infantile spasms</td></tr><tr><td style=\"white-space:nowrap\">HP:0032894<a name=\"hpo-HP.580032894\"> </a></td><td>Seizure precipitated by febrile infection</td></tr><tr><td style=\"white-space:nowrap\">HP:0100661<a name=\"hpo-HP.580100661\"> </a></td><td>Trigeminal neuralgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012207<a name=\"hpo-HP.580012207\"> </a></td><td>Reduced sperm motility</td></tr><tr><td style=\"white-space:nowrap\">HP:0000798<a name=\"hpo-HP.580000798\"> </a></td><td>Oligospermia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012864<a name=\"hpo-HP.580012864\"> </a></td><td>Abnormal sperm morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008232<a name=\"hpo-HP.580008232\"> </a></td><td>Elevated circulating follicle stimulating hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0040306<a name=\"hpo-HP.580040306\"> </a></td><td>Decreased male libido</td></tr><tr><td style=\"white-space:nowrap\">HP:0012208<a name=\"hpo-HP.580012208\"> </a></td><td>Immotile sperm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000027<a name=\"hpo-HP.580000027\"> </a></td><td>Azoospermia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000870<a name=\"hpo-HP.580000870\"> </a></td><td>Increased circulating prolactin concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0008187<a name=\"hpo-HP.580008187\"> </a></td><td>Absence of secondary sex characteristics</td></tr><tr><td style=\"white-space:nowrap\">HP:0010469<a name=\"hpo-HP.580010469\"> </a></td><td>Absent testis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011969<a name=\"hpo-HP.580011969\"> </a></td><td>Elevated circulating luteinizing hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0040171<a name=\"hpo-HP.580040171\"> </a></td><td>Decreased serum testosterone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0003251<a name=\"hpo-HP.580003251\"> </a></td><td>Male infertility</td></tr><tr><td style=\"white-space:nowrap\">HP:0009804<a name=\"hpo-HP.580009804\"> </a></td><td>Reduced number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000548<a name=\"hpo-HP.580000548\"> </a></td><td>Cone/cone-rod dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000546<a name=\"hpo-HP.580000546\"> </a></td><td>Retinal degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0008002<a name=\"hpo-HP.580008002\"> </a></td><td>Abnormality of macular pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000608<a name=\"hpo-HP.580000608\"> </a></td><td>Macular degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0030611<a name=\"hpo-HP.580030611\"> </a></td><td>Retinal pigment epithelial loss on macular OCT</td></tr><tr><td style=\"white-space:nowrap\">HP:0001135<a name=\"hpo-HP.580001135\"> </a></td><td>Chorioretinal dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030468<a name=\"hpo-HP.580030468\"> </a></td><td>Abnormal multifocal electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:00030532<a name=\"hpo-HP.5800030532\"> </a></td><td>Visual acuity test abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0007401<a name=\"hpo-HP.580007401\"> </a></td><td>Macular atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030466<a name=\"hpo-HP.580030466\"> </a></td><td>Abnormal full-field electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:007737<a name=\"hpo-HP.58007737\"> </a></td><td>Bone spicule pigmentation of the retina</td></tr><tr><td style=\"white-space:nowrap\">HP:0011342<a name=\"hpo-HP.580011342\"> </a></td><td>Mild global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0030610<a name=\"hpo-HP.580030610\"> </a></td><td>Photoreceptor outer segment loss on macular OCT</td></tr><tr><td style=\"white-space:nowrap\">HP:0007722<a name=\"hpo-HP.580007722\"> </a></td><td>Retinal pigment epithelial atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030493<a name=\"hpo-HP.580030493\"> </a></td><td>Abnormality of foveal pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0007843<a name=\"hpo-HP.580007843\"> </a></td><td>Attenuation of retinal blood vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0007754<a name=\"hpo-HP.580007754\"> </a></td><td>Macular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011509<a name=\"hpo-HP.580011509\"> </a></td><td>Macular hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0008527<a name=\"hpo-HP.580008527\"> </a></td><td>Congenital sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0200070<a name=\"hpo-HP.580200070\"> </a></td><td>Peripheral retinal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0007793<a name=\"hpo-HP.580007793\"> </a></td><td>Granular macular appearance</td></tr><tr><td style=\"white-space:nowrap\">HP:0007987<a name=\"hpo-HP.580007987\"> </a></td><td>Progressive visual field defects</td></tr><tr><td style=\"white-space:nowrap\">HP:0100817<a name=\"hpo-HP.580100817\"> </a></td><td>Renovascular hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0007868<a name=\"hpo-HP.580007868\"> </a></td><td>obsolete Age-related macular degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0030527<a name=\"hpo-HP.580030527\"> </a></td><td>Very severe constriction of peripheral visual field</td></tr><tr><td style=\"white-space:nowrap\">HP:0030551<a name=\"hpo-HP.580030551\"> </a></td><td>Visual acuity light perception with projection</td></tr><tr><td style=\"white-space:nowrap\">HP:0011505<a name=\"hpo-HP.580011505\"> </a></td><td>Cystoid macular edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0010442<a name=\"hpo-HP.580010442\"> </a></td><td>Polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0007642<a name=\"hpo-HP.580007642\"> </a></td><td>Congenital stationary night blindness</td></tr><tr><td style=\"white-space:nowrap\">HP:0009073<a name=\"hpo-HP.580009073\"> </a></td><td>Progressive proximal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003741<a name=\"hpo-HP.580003741\"> </a></td><td>Congenital muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100299<a name=\"hpo-HP.580100299\"> </a></td><td>Muscle fiber inclusion bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0003540<a name=\"hpo-HP.580003540\"> </a></td><td>Impaired platelet aggregation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010489<a name=\"hpo-HP.580010489\"> </a></td><td>Absent palmar crease</td></tr><tr><td style=\"white-space:nowrap\">HP:0009824<a name=\"hpo-HP.580009824\"> </a></td><td>Upper limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002395<a name=\"hpo-HP.580002395\"> </a></td><td>Lower limb hyperreflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001138<a name=\"hpo-HP.580001138\"> </a></td><td>Optic neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0007103<a name=\"hpo-HP.580007103\"> </a></td><td>Hypointensity of cerebral white matter on MRI</td></tr><tr><td style=\"white-space:nowrap\">HP:0003458<a name=\"hpo-HP.580003458\"> </a></td><td>EMG: myopathic abnormalities</td></tr><tr><td style=\"white-space:nowrap\">HP:0002987<a name=\"hpo-HP.580002987\"> </a></td><td>Elbow flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0006466<a name=\"hpo-HP.580006466\"> </a></td><td>Ankle flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0008458<a name=\"hpo-HP.580008458\"> </a></td><td>Progressive congenital scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000473<a name=\"hpo-HP.580000473\"> </a></td><td>Torticollis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011800<a name=\"hpo-HP.580011800\"> </a></td><td>Midface retrusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000597<a name=\"hpo-HP.580000597\"> </a></td><td>Ophthalmoparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005853<a name=\"hpo-HP.580005853\"> </a></td><td>Congenital foot contraction deformities</td></tr><tr><td style=\"white-space:nowrap\">HP:0007002<a name=\"hpo-HP.580007002\"> </a></td><td>Motor axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003327<a name=\"hpo-HP.580003327\"> </a></td><td>Axial muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003306<a name=\"hpo-HP.580003306\"> </a></td><td>Spinal rigidity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002068<a name=\"hpo-HP.580002068\"> </a></td><td>Neuromuscular dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001002<a name=\"hpo-HP.580001002\"> </a></td><td>obsolete Decreased subcutaneous fat</td></tr><tr><td style=\"white-space:nowrap\">HP:0002880<a name=\"hpo-HP.580002880\"> </a></td><td>obsolete Respiratory difficulties</td></tr><tr><td style=\"white-space:nowrap\">HP:0006829<a name=\"hpo-HP.580006829\"> </a></td><td>Severe muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011448<a name=\"hpo-HP.580011448\"> </a></td><td>Ankle clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0003487<a name=\"hpo-HP.580003487\"> </a></td><td>Babinski sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0002378<a name=\"hpo-HP.580002378\"> </a></td><td>Hand tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002747<a name=\"hpo-HP.580002747\"> </a></td><td>Respiratory insufficiency due to muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002579<a name=\"hpo-HP.580002579\"> </a></td><td>Gastrointestinal dysmotility</td></tr><tr><td style=\"white-space:nowrap\">HP:0001041<a name=\"hpo-HP.580001041\"> </a></td><td>Facial erythema</td></tr><tr><td style=\"white-space:nowrap\">HP:0040180<a name=\"hpo-HP.580040180\"> </a></td><td>Hyperkeratosis pilaris</td></tr><tr><td style=\"white-space:nowrap\">HP:0001382<a name=\"hpo-HP.580001382\"> </a></td><td>Joint hypermobility</td></tr><tr><td style=\"white-space:nowrap\">HP:0003722<a name=\"hpo-HP.580003722\"> </a></td><td>Neck flexor weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003323<a name=\"hpo-HP.580003323\"> </a></td><td>Progressive muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002380<a name=\"hpo-HP.580002380\"> </a></td><td>Fasciculations</td></tr><tr><td style=\"white-space:nowrap\">HP:0012785<a name=\"hpo-HP.580012785\"> </a></td><td>Flexion contracture of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0007936<a name=\"hpo-HP.580007936\"> </a></td><td>Restrictive external ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030319<a name=\"hpo-HP.580030319\"> </a></td><td>Weakness of facial musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0008936<a name=\"hpo-HP.580008936\"> </a></td><td>Muscular hypotonia of the trunk</td></tr><tr><td style=\"white-space:nowrap\">HP:0030230<a name=\"hpo-HP.580030230\"> </a></td><td>Central core regions in muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0011471<a name=\"hpo-HP.580011471\"> </a></td><td>Gastrostomy tube feeding in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001290<a name=\"hpo-HP.580001290\"> </a></td><td>Generalized hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002421<a name=\"hpo-HP.580002421\"> </a></td><td>Poor head control</td></tr><tr><td style=\"white-space:nowrap\">HP:0010301<a name=\"hpo-HP.580010301\"> </a></td><td>Spinal dysraphism</td></tr><tr><td style=\"white-space:nowrap\">HP:0004303<a name=\"hpo-HP.580004303\"> </a></td><td>Abnormal muscle fiber morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009046<a name=\"hpo-HP.580009046\"> </a></td><td>Difficulty running</td></tr><tr><td style=\"white-space:nowrap\">HP:0003715<a name=\"hpo-HP.580003715\"> </a></td><td>Myofibrillar myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000467<a name=\"hpo-HP.580000467\"> </a></td><td>Neck muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001999<a name=\"hpo-HP.580001999\"> </a></td><td>Abnormal facial shape</td></tr><tr><td style=\"white-space:nowrap\">HP:0002751<a name=\"hpo-HP.580002751\"> </a></td><td>Kyphoscoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030223<a name=\"hpo-HP.580030223\"> </a></td><td>Perseveration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002344<a name=\"hpo-HP.580002344\"> </a></td><td>Progressive neurologic deterioration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002522<a name=\"hpo-HP.580002522\"> </a></td><td>Areflexia of lower limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0003805<a name=\"hpo-HP.580003805\"> </a></td><td>Rimmed vacuoles</td></tr><tr><td style=\"white-space:nowrap\">HP:0005781<a name=\"hpo-HP.580005781\"> </a></td><td>Contractures of the large joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0040083<a name=\"hpo-HP.580040083\"> </a></td><td>Toe walking</td></tr><tr><td style=\"white-space:nowrap\">HP:0003749<a name=\"hpo-HP.580003749\"> </a></td><td>Pelvic girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0012444<a name=\"hpo-HP.580012444\"> </a></td><td>Brain atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003738<a name=\"hpo-HP.580003738\"> </a></td><td>Exercise-induced myalgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003756<a name=\"hpo-HP.580003756\"> </a></td><td>Skeletal myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002492<a name=\"hpo-HP.580002492\"> </a></td><td>Morphological abnormality of the corticospinal tract</td></tr><tr><td style=\"white-space:nowrap\">HP:0100302<a name=\"hpo-HP.580100302\"> </a></td><td>Muscle fiber tubuloreticular inclusions</td></tr><tr><td style=\"white-space:nowrap\">HP:0006817<a name=\"hpo-HP.580006817\"> </a></td><td>Aplasia/Hypoplasia of the cerebellar vermis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003473<a name=\"hpo-HP.580003473\"> </a></td><td>Fatigable weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002077<a name=\"hpo-HP.580002077\"> </a></td><td>Migraine with aura</td></tr><tr><td style=\"white-space:nowrap\">HP:0100559<a name=\"hpo-HP.580100559\"> </a></td><td>Lower limb asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0002079<a name=\"hpo-HP.580002079\"> </a></td><td>Hypoplasia of the corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002804<a name=\"hpo-HP.580002804\"> </a></td><td>Arthrogryposis multiplex congenita</td></tr><tr><td style=\"white-space:nowrap\">HP:0011623<a name=\"hpo-HP.580011623\"> </a></td><td>Muscular ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002191<a name=\"hpo-HP.580002191\"> </a></td><td>Progressive spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003390<a name=\"hpo-HP.580003390\"> </a></td><td>Sensory axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006986<a name=\"hpo-HP.580006986\"> </a></td><td>Upper limb spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002464<a name=\"hpo-HP.580002464\"> </a></td><td>Spastic dysarthria</td></tr><tr><td style=\"white-space:nowrap\">HP:0001308<a name=\"hpo-HP.580001308\"> </a></td><td>Tongue fasciculations</td></tr><tr><td style=\"white-space:nowrap\">HP:0007010<a name=\"hpo-HP.580007010\"> </a></td><td>Poor fine motor coordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0003737<a name=\"hpo-HP.580003737\"> </a></td><td>Mitochondrial myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0008012<a name=\"hpo-HP.580008012\"> </a></td><td>obsolete Congenital myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008872<a name=\"hpo-HP.580008872\"> </a></td><td>Feeding difficulties in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005750<a name=\"hpo-HP.580005750\"> </a></td><td>Contractures of the joints of the lower limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0009067<a name=\"hpo-HP.580009067\"> </a></td><td>Progressive spinal muscular atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001623<a name=\"hpo-HP.580001623\"> </a></td><td>Breech presentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001374<a name=\"hpo-HP.580001374\"> </a></td><td>Congenital hip dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002359<a name=\"hpo-HP.580002359\"> </a></td><td>Frequent falls</td></tr><tr><td style=\"white-space:nowrap\">HP:0003803<a name=\"hpo-HP.580003803\"> </a></td><td>Type 1 muscle fiber predominance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011410<a name=\"hpo-HP.580011410\"> </a></td><td>Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0008947<a name=\"hpo-HP.580008947\"> </a></td><td>Infantile muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100501<a name=\"hpo-HP.580100501\"> </a></td><td>Recurrent bronchiolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003789<a name=\"hpo-HP.580003789\"> </a></td><td>Minicore myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000544<a name=\"hpo-HP.580000544\"> </a></td><td>External ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001605<a name=\"hpo-HP.580001605\"> </a></td><td>Vocal cord paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003712<a name=\"hpo-HP.580003712\"> </a></td><td>Skeletal muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0012507<a name=\"hpo-HP.580012507\"> </a></td><td>Weakness of orbicularis oculi muscle</td></tr><tr><td style=\"white-space:nowrap\">HP:0009816<a name=\"hpo-HP.580009816\"> </a></td><td>Lower limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0008935<a name=\"hpo-HP.580008935\"> </a></td><td>Generalized neonatal hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003484<a name=\"hpo-HP.580003484\"> </a></td><td>Upper limb muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0008331<a name=\"hpo-HP.580008331\"> </a></td><td>Elevated creatine kinase after exercise</td></tr><tr><td style=\"white-space:nowrap\">HP:0001315<a name=\"hpo-HP.580001315\"> </a></td><td>Reduced tendon reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0012473<a name=\"hpo-HP.580012473\"> </a></td><td>Tongue atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003273<a name=\"hpo-HP.580003273\"> </a></td><td>Hip contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0006380<a name=\"hpo-HP.580006380\"> </a></td><td>Knee flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0003752<a name=\"hpo-HP.580003752\"> </a></td><td>Episodic flaccid weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0100298<a name=\"hpo-HP.580100298\"> </a></td><td>Motheaten muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0003693<a name=\"hpo-HP.580003693\"> </a></td><td>Distal amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002167<a name=\"hpo-HP.580002167\"> </a></td><td>Neurological speech impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0003388<a name=\"hpo-HP.580003388\"> </a></td><td>Easy fatigability</td></tr><tr><td style=\"white-space:nowrap\">HP:0001348<a name=\"hpo-HP.580001348\"> </a></td><td>Brisk reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0003445<a name=\"hpo-HP.580003445\"> </a></td><td>EMG: neuropathic changes</td></tr><tr><td style=\"white-space:nowrap\">HP:0009063<a name=\"hpo-HP.580009063\"> </a></td><td>Progressive distal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003720<a name=\"hpo-HP.580003720\"> </a></td><td>Generalized muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002493<a name=\"hpo-HP.580002493\"> </a></td><td>Upper motor neuron dysfunction</td></tr><tr><td style=\"white-space:nowrap\">HP:0012448<a name=\"hpo-HP.580012448\"> </a></td><td>Delayed myelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0001338<a name=\"hpo-HP.580001338\"> </a></td><td>Partial agenesis of the corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0006879<a name=\"hpo-HP.580006879\"> </a></td><td>Pontocerebellar atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0200101<a name=\"hpo-HP.580200101\"> </a></td><td>Decreased/absent ankle reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0009020<a name=\"hpo-HP.580009020\"> </a></td><td>Exercise-induced muscle fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002067<a name=\"hpo-HP.580002067\"> </a></td><td>Bradykinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012751<a name=\"hpo-HP.580012751\"> </a></td><td>Abnormal basal ganglia MRI signal intensity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003355<a name=\"hpo-HP.580003355\"> </a></td><td>Aminoaciduria</td></tr><tr><td style=\"white-space:nowrap\">HP:0012450<a name=\"hpo-HP.580012450\"> </a></td><td>Chronic constipation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011834<a name=\"hpo-HP.580011834\"> </a></td><td>Moyamoya phenomenon</td></tr><tr><td style=\"white-space:nowrap\">HP:0001297<a name=\"hpo-HP.580001297\"> </a></td><td>Stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0200049<a name=\"hpo-HP.580200049\"> </a></td><td>Upper limb hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008981<a name=\"hpo-HP.580008981\"> </a></td><td>Calf muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006785<a name=\"hpo-HP.580006785\"> </a></td><td>Limb-girdle muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006957<a name=\"hpo-HP.580006957\"> </a></td><td>Loss of ability to walk</td></tr><tr><td style=\"white-space:nowrap\">HP:0030098<a name=\"hpo-HP.580030098\"> </a></td><td>Reduced muscle dystrophin expression</td></tr><tr><td style=\"white-space:nowrap\">HP:0030115<a name=\"hpo-HP.580030115\"> </a></td><td>Reduced muscle fiber dysferlin</td></tr><tr><td style=\"white-space:nowrap\">HP:0002058<a name=\"hpo-HP.580002058\"> </a></td><td>Myopathic facies</td></tr><tr><td style=\"white-space:nowrap\">HP:0007858<a name=\"hpo-HP.580007858\"> </a></td><td>Chorioretinal lacunae</td></tr><tr><td style=\"white-space:nowrap\">HP:0006657<a name=\"hpo-HP.580006657\"> </a></td><td>Hypoplasia of first ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0007165<a name=\"hpo-HP.580007165\"> </a></td><td>Periventricular heterotopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0009779<a name=\"hpo-HP.580009779\"> </a></td><td>3-4 toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010665<a name=\"hpo-HP.580010665\"> </a></td><td>Bilateral coxa valga</td></tr><tr><td style=\"white-space:nowrap\">HP:0007598<a name=\"hpo-HP.580007598\"> </a></td><td>Bilateral single transverse palmar creases</td></tr><tr><td style=\"white-space:nowrap\">HP:0006101<a name=\"hpo-HP.580006101\"> </a></td><td>Finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010511<a name=\"hpo-HP.580010511\"> </a></td><td>Long toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002370<a name=\"hpo-HP.580002370\"> </a></td><td>Poor coordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0000480<a name=\"hpo-HP.580000480\"> </a></td><td>Retinal coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001770<a name=\"hpo-HP.580001770\"> </a></td><td>Toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010851<a name=\"hpo-HP.580010851\"> </a></td><td>EEG with burst suppression</td></tr><tr><td style=\"white-space:nowrap\">HP:0002791<a name=\"hpo-HP.580002791\"> </a></td><td>Hypoventilation</td></tr><tr><td style=\"white-space:nowrap\">HP:0040075<a name=\"hpo-HP.580040075\"> </a></td><td>Hypopituitarism</td></tr><tr><td style=\"white-space:nowrap\">HP:0012506<a name=\"hpo-HP.580012506\"> </a></td><td>Small pituitary gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000538<a name=\"hpo-HP.580000538\"> </a></td><td>Pseudopapilledema</td></tr><tr><td style=\"white-space:nowrap\">HP:0012717<a name=\"hpo-HP.580012717\"> </a></td><td>Severe conductive hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001370<a name=\"hpo-HP.580001370\"> </a></td><td>Rheumatoid arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000016<a name=\"hpo-HP.580000016\"> </a></td><td>Urinary retention</td></tr><tr><td style=\"white-space:nowrap\">HP:0012537<a name=\"hpo-HP.580012537\"> </a></td><td>Food intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011297<a name=\"hpo-HP.580011297\"> </a></td><td>Abnormal digit morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001273<a name=\"hpo-HP.580001273\"> </a></td><td>Abnormal corpus callosum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0030148<a name=\"hpo-HP.580030148\"> </a></td><td>Heart murmur</td></tr><tr><td style=\"white-space:nowrap\">HP:0045018<a name=\"hpo-HP.580045018\"> </a></td><td>Partial duplication of eyebrows</td></tr><tr><td style=\"white-space:nowrap\">HP:0008998<a name=\"hpo-HP.580008998\"> </a></td><td>Pectoralis hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001707<a name=\"hpo-HP.580001707\"> </a></td><td>Abnormal right ventricle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001540<a name=\"hpo-HP.580001540\"> </a></td><td>Diastasis recti</td></tr><tr><td style=\"white-space:nowrap\">HP:0100693<a name=\"hpo-HP.580100693\"> </a></td><td>Iridodonesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002265<a name=\"hpo-HP.580002265\"> </a></td><td>Large fleshy ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001132<a name=\"hpo-HP.580001132\"> </a></td><td>Lens subluxation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004927<a name=\"hpo-HP.580004927\"> </a></td><td>Pulmonary artery dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005619<a name=\"hpo-HP.580005619\"> </a></td><td>Thoracolumbar kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008619<a name=\"hpo-HP.580008619\"> </a></td><td>Bilateral sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001045<a name=\"hpo-HP.580001045\"> </a></td><td>Vitiligo</td></tr><tr><td style=\"white-space:nowrap\">HP:0009124<a name=\"hpo-HP.580009124\"> </a></td><td>Abnormal adipose tissue morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002979<a name=\"hpo-HP.580002979\"> </a></td><td>Bowing of the legs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000455<a name=\"hpo-HP.580000455\"> </a></td><td>Broad nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001007<a name=\"hpo-HP.580001007\"> </a></td><td>Hirsutism</td></tr><tr><td style=\"white-space:nowrap\">HP:0010314<a name=\"hpo-HP.580010314\"> </a></td><td>Premature thelarche</td></tr><tr><td style=\"white-space:nowrap\">HP:0000075<a name=\"hpo-HP.580000075\"> </a></td><td>Renal duplication</td></tr><tr><td style=\"white-space:nowrap\">HP:0000368<a name=\"hpo-HP.580000368\"> </a></td><td>Low-set, posteriorly rotated ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001052<a name=\"hpo-HP.580001052\"> </a></td><td>Nevus flammeus</td></tr><tr><td style=\"white-space:nowrap\">HP:0200048<a name=\"hpo-HP.580200048\"> </a></td><td>Cyanotic episode</td></tr><tr><td style=\"white-space:nowrap\">HP:0001902<a name=\"hpo-HP.580001902\"> </a></td><td>Giant platelets</td></tr><tr><td style=\"white-space:nowrap\">HP:0030043<a name=\"hpo-HP.580030043\"> </a></td><td>Hip subluxation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002938<a name=\"hpo-HP.580002938\"> </a></td><td>Lumbar hyperlordosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030084<a name=\"hpo-HP.580030084\"> </a></td><td>Clinodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005560<a name=\"hpo-HP.580005560\"> </a></td><td>Imbalanced hemoglobin synthesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001539<a name=\"hpo-HP.580001539\"> </a></td><td>Omphalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0009778<a name=\"hpo-HP.580009778\"> </a></td><td>Short thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002277<a name=\"hpo-HP.580002277\"> </a></td><td>Horner syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0011701<a name=\"hpo-HP.580011701\"> </a></td><td>Multifocal atrial tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005274<a name=\"hpo-HP.580005274\"> </a></td><td>Prominent nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001262<a name=\"hpo-HP.580001262\"> </a></td><td>Excessive daytime somnolence</td></tr><tr><td style=\"white-space:nowrap\">HP:0001285<a name=\"hpo-HP.580001285\"> </a></td><td>Spastic tetraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012171<a name=\"hpo-HP.580012171\"> </a></td><td>Stereotypical hand wringing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002518<a name=\"hpo-HP.580002518\"> </a></td><td>Abnormality of the periventricular white matter</td></tr><tr><td style=\"white-space:nowrap\">HP:0005692<a name=\"hpo-HP.580005692\"> </a></td><td>Joint hyperflexibility</td></tr><tr><td style=\"white-space:nowrap\">HP:0007440<a name=\"hpo-HP.580007440\"> </a></td><td>Generalized hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001805<a name=\"hpo-HP.580001805\"> </a></td><td>Onychogryposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011945<a name=\"hpo-HP.580011945\"> </a></td><td>Bronchiolitis obliterans organizing pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003763<a name=\"hpo-HP.580003763\"> </a></td><td>Bruxism</td></tr><tr><td style=\"white-space:nowrap\">HP:0010500<a name=\"hpo-HP.580010500\"> </a></td><td>Hyperextensibility of the knee</td></tr><tr><td style=\"white-space:nowrap\">HP:0040115<a name=\"hpo-HP.580040115\"> </a></td><td>Abnormality of the Eustachian tube</td></tr><tr><td style=\"white-space:nowrap\">HP:0008751<a name=\"hpo-HP.580008751\"> </a></td><td>Laryngeal cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0000403<a name=\"hpo-HP.580000403\"> </a></td><td>Recurrent otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0001787<a name=\"hpo-HP.580001787\"> </a></td><td>Abnormal delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0002571<a name=\"hpo-HP.580002571\"> </a></td><td>Achalasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002615<a name=\"hpo-HP.580002615\"> </a></td><td>Hypotension</td></tr><tr><td style=\"white-space:nowrap\">HP:0003550<a name=\"hpo-HP.580003550\"> </a></td><td>Predominantly lower limb lymphedema</td></tr><tr><td style=\"white-space:nowrap\">HP:0030363<a name=\"hpo-HP.580030363\"> </a></td><td>Primary Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0001727<a name=\"hpo-HP.580001727\"> </a></td><td>Thromboembolic stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0100603<a name=\"hpo-HP.580100603\"> </a></td><td>Toxemia of pregnancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0010836<a name=\"hpo-HP.580010836\"> </a></td><td>Abnormal circulating copper concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0000356<a name=\"hpo-HP.580000356\"> </a></td><td>Abnormality of the outer ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0002197<a name=\"hpo-HP.580002197\"> </a></td><td>Generalized-onset seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011436<a name=\"hpo-HP.580011436\"> </a></td><td>Abnormal maternal serum screening</td></tr><tr><td style=\"white-space:nowrap\">HP:0003517<a name=\"hpo-HP.580003517\"> </a></td><td>Birth length greater than 97th percentile</td></tr><tr><td style=\"white-space:nowrap\">HP:0003561<a name=\"hpo-HP.580003561\"> </a></td><td>Birth length less than 3rd percentile</td></tr><tr><td style=\"white-space:nowrap\">HP:0012188<a name=\"hpo-HP.580012188\"> </a></td><td>Hyperemesis gravidarum</td></tr><tr><td style=\"white-space:nowrap\">HP:0010519<a name=\"hpo-HP.580010519\"> </a></td><td>Increased fetal movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0030244<a name=\"hpo-HP.580030244\"> </a></td><td>Maternal fever in pregnancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0008071<a name=\"hpo-HP.580008071\"> </a></td><td>Maternal hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0100622<a name=\"hpo-HP.580100622\"> </a></td><td>Maternal seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011438<a name=\"hpo-HP.580011438\"> </a></td><td>Maternal teratogenic exposure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001998<a name=\"hpo-HP.580001998\"> </a></td><td>Neonatal hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0040187<a name=\"hpo-HP.580040187\"> </a></td><td>Neonatal sepsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002033<a name=\"hpo-HP.580002033\"> </a></td><td>Poor suck</td></tr><tr><td style=\"white-space:nowrap\">HP:0006579<a name=\"hpo-HP.580006579\"> </a></td><td>Prolonged neonatal jaundice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001724<a name=\"hpo-HP.580001724\"> </a></td><td>obsolete Aortic dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010621<a name=\"hpo-HP.580010621\"> </a></td><td>Cutaneous syndactyly of toes</td></tr><tr><td style=\"white-space:nowrap\">HP:0001880<a name=\"hpo-HP.580001880\"> </a></td><td>Eosinophilia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000162<a name=\"hpo-HP.580000162\"> </a></td><td>Glossoptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100578<a name=\"hpo-HP.580100578\"> </a></td><td>Lipoatrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002562<a name=\"hpo-HP.580002562\"> </a></td><td>Low-set nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0012893<a name=\"hpo-HP.580012893\"> </a></td><td>Neck muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001027<a name=\"hpo-HP.580001027\"> </a></td><td>Soft, doughy skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0100738<a name=\"hpo-HP.580100738\"> </a></td><td>Abnormal eating behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0007328<a name=\"hpo-HP.580007328\"> </a></td><td>Impaired pain sensation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002878<a name=\"hpo-HP.580002878\"> </a></td><td>Respiratory failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001776<a name=\"hpo-HP.580001776\"> </a></td><td>Bilateral talipes equinovarus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001360<a name=\"hpo-HP.580001360\"> </a></td><td>Holoprosencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001973<a name=\"hpo-HP.580001973\"> </a></td><td>Autoimmune thrombocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100749<a name=\"hpo-HP.580100749\"> </a></td><td>Chest pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0012531<a name=\"hpo-HP.580012531\"> </a></td><td>Pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0007585<a name=\"hpo-HP.580007585\"> </a></td><td>Skin fragility with non-scarring blistering</td></tr><tr><td style=\"white-space:nowrap\">HP:0002108<a name=\"hpo-HP.580002108\"> </a></td><td>Spontaneous pneumothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0006562<a name=\"hpo-HP.580006562\"> </a></td><td>Viral hepatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012647<a name=\"hpo-HP.580012647\"> </a></td><td>Abnormal inflammatory response</td></tr><tr><td style=\"white-space:nowrap\">HP:0012088<a name=\"hpo-HP.580012088\"> </a></td><td>Abnormal urinary odor</td></tr><tr><td style=\"white-space:nowrap\">HP:0011458<a name=\"hpo-HP.580011458\"> </a></td><td>Abdominal symptom</td></tr><tr><td style=\"white-space:nowrap\">HP:0002829<a name=\"hpo-HP.580002829\"> </a></td><td>Arthralgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010783<a name=\"hpo-HP.580010783\"> </a></td><td>Erythema</td></tr><tr><td style=\"white-space:nowrap\">HP:0010307<a name=\"hpo-HP.580010307\"> </a></td><td>Stridor</td></tr><tr><td style=\"white-space:nowrap\">HP:0001269<a name=\"hpo-HP.580001269\"> </a></td><td>Hemiparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006532<a name=\"hpo-HP.580006532\"> </a></td><td>Recurrent pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002580<a name=\"hpo-HP.580002580\"> </a></td><td>Volvulus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012387<a name=\"hpo-HP.580012387\"> </a></td><td>Bronchitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001266<a name=\"hpo-HP.580001266\"> </a></td><td>Choreoathetosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001531<a name=\"hpo-HP.580001531\"> </a></td><td>Failure to thrive in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011470<a name=\"hpo-HP.580011470\"> </a></td><td>Nasogastric tube feeding in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001361<a name=\"hpo-HP.580001361\"> </a></td><td>Nystagmus-induced head nodding</td></tr><tr><td style=\"white-space:nowrap\">HP:0001997<a name=\"hpo-HP.580001997\"> </a></td><td>Gout</td></tr><tr><td style=\"white-space:nowrap\">HP:0000965<a name=\"hpo-HP.580000965\"> </a></td><td>Cutis marmorata</td></tr><tr><td style=\"white-space:nowrap\">HP:0010316<a name=\"hpo-HP.580010316\"> </a></td><td>Ebstein anomaly of the tricuspid valve</td></tr><tr><td style=\"white-space:nowrap\">HP:0010543<a name=\"hpo-HP.580010543\"> </a></td><td>Opsoclonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0007704<a name=\"hpo-HP.580007704\"> </a></td><td>Paroxysmal involuntary eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0030364<a name=\"hpo-HP.580030364\"> </a></td><td>Secondary Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0007738<a name=\"hpo-HP.580007738\"> </a></td><td>Uncontrolled eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0030366<a name=\"hpo-HP.580030366\"> </a></td><td>Delivery by Odon device</td></tr><tr><td style=\"white-space:nowrap\">HP:0011411<a name=\"hpo-HP.580011411\"> </a></td><td>Forceps delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0030369<a name=\"hpo-HP.580030369\"> </a></td><td>Induced vaginal delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0005268<a name=\"hpo-HP.580005268\"> </a></td><td>Spontaneous abortion</td></tr><tr><td style=\"white-space:nowrap\">HP:0030365<a name=\"hpo-HP.580030365\"> </a></td><td>Vaginal birth after Caesarian</td></tr><tr><td style=\"white-space:nowrap\">HP:0011412<a name=\"hpo-HP.580011412\"> </a></td><td>Ventouse delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0002572<a name=\"hpo-HP.580002572\"> </a></td><td>Episodic vomiting</td></tr><tr><td style=\"white-space:nowrap\">HP:0030350<a name=\"hpo-HP.580030350\"> </a></td><td>Erythematous papule</td></tr><tr><td style=\"white-space:nowrap\">HP:0001386<a name=\"hpo-HP.580001386\"> </a></td><td>Joint swelling</td></tr><tr><td style=\"white-space:nowrap\">HP:0000147<a name=\"hpo-HP.580000147\"> </a></td><td>Polycystic ovaries</td></tr><tr><td style=\"white-space:nowrap\">HP:0012412<a name=\"hpo-HP.580012412\"> </a></td><td>Premature adrenarche</td></tr><tr><td style=\"white-space:nowrap\">HP:0004411<a name=\"hpo-HP.580004411\"> </a></td><td>Deviated nasal septum</td></tr><tr><td style=\"white-space:nowrap\">HP:0040183<a name=\"hpo-HP.580040183\"> </a></td><td>Encopresis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100507<a name=\"hpo-HP.580100507\"> </a></td><td>Reduced blood folate concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0007011<a name=\"hpo-HP.580007011\"> </a></td><td>Fourth cranial nerve palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000375<a name=\"hpo-HP.580000375\"> </a></td><td>Abnormal cochlea morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009911<a name=\"hpo-HP.580009911\"> </a></td><td>Abnormal temporal bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000081<a name=\"hpo-HP.580000081\"> </a></td><td>Duplicated collecting system</td></tr><tr><td style=\"white-space:nowrap\">HP:0006894<a name=\"hpo-HP.580006894\"> </a></td><td>Hypoplastic olfactory lobes</td></tr><tr><td style=\"white-space:nowrap\">HP:0011380<a name=\"hpo-HP.580011380\"> </a></td><td>Morphological abnormality of the semicircular canal</td></tr><tr><td style=\"white-space:nowrap\">HP:0000110<a name=\"hpo-HP.580000110\"> </a></td><td>Renal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030025<a name=\"hpo-HP.580030025\"> </a></td><td>Auricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0010044<a name=\"hpo-HP.580010044\"> </a></td><td>Short 4th metacarpal</td></tr><tr><td style=\"white-space:nowrap\">HP:0010047<a name=\"hpo-HP.580010047\"> </a></td><td>Short 5th metacarpal</td></tr><tr><td style=\"white-space:nowrap\">HP:0000201<a name=\"hpo-HP.580000201\"> </a></td><td>Pierre-Robin sequence</td></tr><tr><td style=\"white-space:nowrap\">HP:0100837<a name=\"hpo-HP.580100837\"> </a></td><td>Atrophodermia vermiculata</td></tr><tr><td style=\"white-space:nowrap\">HP:0002673<a name=\"hpo-HP.580002673\"> </a></td><td>Coxa valga</td></tr><tr><td style=\"white-space:nowrap\">HP:0001476<a name=\"hpo-HP.580001476\"> </a></td><td>Delayed closure of the anterior fontanelle</td></tr><tr><td style=\"white-space:nowrap\">HP:0011069<a name=\"hpo-HP.580011069\"> </a></td><td>Increased number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009879<a name=\"hpo-HP.580009879\"> </a></td><td>Simplified gyral pattern</td></tr><tr><td style=\"white-space:nowrap\">HP:0006315<a name=\"hpo-HP.580006315\"> </a></td><td>Single median maxillary incisor</td></tr><tr><td style=\"white-space:nowrap\">HP:0001194<a name=\"hpo-HP.580001194\"> </a></td><td>Abnormalities of placenta or umbilical cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0100767<a name=\"hpo-HP.580100767\"> </a></td><td>Abnormal placenta morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0006543<a name=\"hpo-HP.580006543\"> </a></td><td>Cardiorespiratory arrest</td></tr><tr><td style=\"white-space:nowrap\">HP:0003074<a name=\"hpo-HP.580003074\"> </a></td><td>Hyperglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000842<a name=\"hpo-HP.580000842\"> </a></td><td>Hyperinsulinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011951<a name=\"hpo-HP.580011951\"> </a></td><td>Aspiration pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006528<a name=\"hpo-HP.580006528\"> </a></td><td>Chronic lung disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0002383<a name=\"hpo-HP.580002383\"> </a></td><td>Encephalitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000388<a name=\"hpo-HP.580000388\"> </a></td><td>Otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0002530<a name=\"hpo-HP.580002530\"> </a></td><td>Axial dystonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002780<a name=\"hpo-HP.580002780\"> </a></td><td>Bronchomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008755<a name=\"hpo-HP.580008755\"> </a></td><td>Laryngotracheomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000308<a name=\"hpo-HP.580000308\"> </a></td><td>Microretrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002786<a name=\"hpo-HP.580002786\"> </a></td><td>Tracheobronchomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012389<a name=\"hpo-HP.580012389\"> </a></td><td>Appendicular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011323<a name=\"hpo-HP.580011323\"> </a></td><td>Cleft of chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000417<a name=\"hpo-HP.580000417\"> </a></td><td>Slender nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0001863<a name=\"hpo-HP.580001863\"> </a></td><td>Toe clinodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0008386<a name=\"hpo-HP.580008386\"> </a></td><td>Aplasia/Hypoplasia of the nails</td></tr><tr><td style=\"white-space:nowrap\">HP:0006989<a name=\"hpo-HP.580006989\"> </a></td><td>Dysplastic corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0100954<a name=\"hpo-HP.580100954\"> </a></td><td>Open operculum</td></tr><tr><td style=\"white-space:nowrap\">HP:0004482<a name=\"hpo-HP.580004482\"> </a></td><td>Relative macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:3000033<a name=\"hpo-HP.583000033\"> </a></td><td>Abnormal nasopharyngeal adenoid morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009062<a name=\"hpo-HP.580009062\"> </a></td><td>Infantile axial hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002189<a name=\"hpo-HP.580002189\"> </a></td><td>obsolete Excessive daytime sleepiness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002141<a name=\"hpo-HP.580002141\"> </a></td><td>Gait imbalance</td></tr><tr><td style=\"white-space:nowrap\">HP:0012734<a name=\"hpo-HP.580012734\"> </a></td><td>Ketotic hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005968<a name=\"hpo-HP.580005968\"> </a></td><td>Temperature instability</td></tr><tr><td style=\"white-space:nowrap\">HP:0012538<a name=\"hpo-HP.580012538\"> </a></td><td>Gluten intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0000979<a name=\"hpo-HP.580000979\"> </a></td><td>Purpura</td></tr><tr><td style=\"white-space:nowrap\">HP:0001988<a name=\"hpo-HP.580001988\"> </a></td><td>Recurrent hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001488<a name=\"hpo-HP.580001488\"> </a></td><td>Bilateral ptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011229<a name=\"hpo-HP.580011229\"> </a></td><td>Broad eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0004440<a name=\"hpo-HP.580004440\"> </a></td><td>Coronal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004453<a name=\"hpo-HP.580004453\"> </a></td><td>Overfolding of the superior helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0012547<a name=\"hpo-HP.580012547\"> </a></td><td>Abnormal involuntary eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0100814<a name=\"hpo-HP.580100814\"> </a></td><td>Blue nevus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010751<a name=\"hpo-HP.580010751\"> </a></td><td>Dimple chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0007087<a name=\"hpo-HP.580007087\"> </a></td><td>obsolete Involuntary jerking movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0012498<a name=\"hpo-HP.580012498\"> </a></td><td>Nuchal cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0002472<a name=\"hpo-HP.580002472\"> </a></td><td>Small cerebral cortex</td></tr><tr><td style=\"white-space:nowrap\">HP:0100307<a name=\"hpo-HP.580100307\"> </a></td><td>Cerebellar hemisphere hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002151<a name=\"hpo-HP.580002151\"> </a></td><td>Increased serum lactate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001698<a name=\"hpo-HP.580001698\"> </a></td><td>Pericardial effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0006903<a name=\"hpo-HP.580006903\"> </a></td><td>Congenital peripheral neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006895<a name=\"hpo-HP.580006895\"> </a></td><td>Lower limb hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002744<a name=\"hpo-HP.580002744\"> </a></td><td>Bilateral cleft lip and palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0010664<a name=\"hpo-HP.580010664\"> </a></td><td>Fusion of the left and right thalami</td></tr><tr><td style=\"white-space:nowrap\">HP:0000327<a name=\"hpo-HP.580000327\"> </a></td><td>Hypoplasia of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0000474<a name=\"hpo-HP.580000474\"> </a></td><td>Thickened nuchal skin fold</td></tr><tr><td style=\"white-space:nowrap\">HP:0000105<a name=\"hpo-HP.580000105\"> </a></td><td>Enlarged kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0000113<a name=\"hpo-HP.580000113\"> </a></td><td>Polycystic kidney dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000104<a name=\"hpo-HP.580000104\"> </a></td><td>Renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001362<a name=\"hpo-HP.580001362\"> </a></td><td>Calvarial skull defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0008245<a name=\"hpo-HP.580008245\"> </a></td><td>Pituitary hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001552<a name=\"hpo-HP.580001552\"> </a></td><td>Barrel-shaped chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0006297<a name=\"hpo-HP.580006297\"> </a></td><td>Hypoplasia of dental enamel</td></tr><tr><td style=\"white-space:nowrap\">HP:0100023<a name=\"hpo-HP.580100023\"> </a></td><td>Recurrent hand flapping</td></tr><tr><td style=\"white-space:nowrap\">HP:0005518<a name=\"hpo-HP.580005518\"> </a></td><td>Increased mean corpuscular volume</td></tr><tr><td style=\"white-space:nowrap\">HP:0012418<a name=\"hpo-HP.580012418\"> </a></td><td>Hypoxemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100259<a name=\"hpo-HP.580100259\"> </a></td><td>Postaxial polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010814<a name=\"hpo-HP.580010814\"> </a></td><td>Abnormal position of hair whorl</td></tr><tr><td style=\"white-space:nowrap\">HP:0003764<a name=\"hpo-HP.580003764\"> </a></td><td>Nevus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000445<a name=\"hpo-HP.580000445\"> </a></td><td>Wide nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0010677<a name=\"hpo-HP.580010677\"> </a></td><td>Enuresis nocturna</td></tr><tr><td style=\"white-space:nowrap\">HP:0001510<a name=\"hpo-HP.580001510\"> </a></td><td>Growth delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0012428<a name=\"hpo-HP.580012428\"> </a></td><td>Prominent calcaneus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012471<a name=\"hpo-HP.580012471\"> </a></td><td>Thick vermilion border</td></tr><tr><td style=\"white-space:nowrap\">HP:0007110<a name=\"hpo-HP.580007110\"> </a></td><td>Central hypoventilation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010614<a name=\"hpo-HP.580010614\"> </a></td><td>Fibroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001034<a name=\"hpo-HP.580001034\"> </a></td><td>Hypermelanotic macule</td></tr><tr><td style=\"white-space:nowrap\">HP:0011365<a name=\"hpo-HP.580011365\"> </a></td><td>Patchy hypopigmentation of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0001920<a name=\"hpo-HP.580001920\"> </a></td><td>Renal artery stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002828<a name=\"hpo-HP.580002828\"> </a></td><td>Multiple joint contractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0002144<a name=\"hpo-HP.580002144\"> </a></td><td>Tethered cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0010964<a name=\"hpo-HP.580010964\"> </a></td><td>Abnormal circulating long-chain fatty-acid concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0010536<a name=\"hpo-HP.580010536\"> </a></td><td>Central sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0011262<a name=\"hpo-HP.580011262\"> </a></td><td>Crimped helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0040079<a name=\"hpo-HP.580040079\"> </a></td><td>Irregular dentition</td></tr><tr><td style=\"white-space:nowrap\">HP:0011481<a name=\"hpo-HP.580011481\"> </a></td><td>Abnormal lacrimal duct morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000220<a name=\"hpo-HP.580000220\"> </a></td><td>Velopharyngeal insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002153<a name=\"hpo-HP.580002153\"> </a></td><td>Hyperkalemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002148<a name=\"hpo-HP.580002148\"> </a></td><td>Hypophosphatemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012621<a name=\"hpo-HP.580012621\"> </a></td><td>Persistent cloaca</td></tr><tr><td style=\"white-space:nowrap\">HP:0000867<a name=\"hpo-HP.580000867\"> </a></td><td>Secondary hyperparathyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0003762<a name=\"hpo-HP.580003762\"> </a></td><td>Uterus didelphys</td></tr><tr><td style=\"white-space:nowrap\">HP:0100512<a name=\"hpo-HP.580100512\"> </a></td><td>Low levels of vitamin D</td></tr><tr><td style=\"white-space:nowrap\">HP:0012156<a name=\"hpo-HP.580012156\"> </a></td><td>Hemophagocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008209<a name=\"hpo-HP.580008209\"> </a></td><td>Premature ovarian insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0004349<a name=\"hpo-HP.580004349\"> </a></td><td>Reduced bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0001924<a name=\"hpo-HP.580001924\"> </a></td><td>Sideroblastic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011703<a name=\"hpo-HP.580011703\"> </a></td><td>Sinus tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010609<a name=\"hpo-HP.580010609\"> </a></td><td>Skin tags</td></tr><tr><td style=\"white-space:nowrap\">HP:0002725<a name=\"hpo-HP.580002725\"> </a></td><td>Systemic lupus erythematosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0003193<a name=\"hpo-HP.580003193\"> </a></td><td>Allergic rhinitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006896<a name=\"hpo-HP.580006896\"> </a></td><td>Hypnopompic hallucinations</td></tr><tr><td style=\"white-space:nowrap\">HP:0002524<a name=\"hpo-HP.580002524\"> </a></td><td>Cataplexy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005227<a name=\"hpo-HP.580005227\"> </a></td><td>Adenomatous colonic polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012173<a name=\"hpo-HP.580012173\"> </a></td><td>Orthostatic tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001271<a name=\"hpo-HP.580001271\"> </a></td><td>Polyneuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0009120<a name=\"hpo-HP.580009120\"> </a></td><td>Aplasia/Hypoplasia involving the sinuses</td></tr><tr><td style=\"white-space:nowrap\">HP:0000625<a name=\"hpo-HP.580000625\"> </a></td><td>Eyelid coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0009754<a name=\"hpo-HP.580009754\"> </a></td><td>Fibrous syngnathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012478<a name=\"hpo-HP.580012478\"> </a></td><td>Temporomandibular joint ankylosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001233<a name=\"hpo-HP.580001233\"> </a></td><td>2-3 finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000811<a name=\"hpo-HP.580000811\"> </a></td><td>Abnormal external genitalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005120<a name=\"hpo-HP.580005120\"> </a></td><td>Abnormal cardiac atrium morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008388<a name=\"hpo-HP.580008388\"> </a></td><td>Abnormal toenail morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011467<a name=\"hpo-HP.580011467\"> </a></td><td>Absent gallbladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0010760<a name=\"hpo-HP.580010760\"> </a></td><td>Absent toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001545<a name=\"hpo-HP.580001545\"> </a></td><td>Anteriorly placed anus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001640<a name=\"hpo-HP.580001640\"> </a></td><td>Cardiomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002990<a name=\"hpo-HP.580002990\"> </a></td><td>Fibular aplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004443<a name=\"hpo-HP.580004443\"> </a></td><td>Lambdoidal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008569<a name=\"hpo-HP.580008569\"> </a></td><td>Microtia, second degree</td></tr><tr><td style=\"white-space:nowrap\">HP:0006277<a name=\"hpo-HP.580006277\"> </a></td><td>Pancreatic hyperplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010445<a name=\"hpo-HP.580010445\"> </a></td><td>Primum atrial septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0011640<a name=\"hpo-HP.580011640\"> </a></td><td>Single coronary artery origin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011608<a name=\"hpo-HP.580011608\"> </a></td><td>Type II truncus arteriosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0011327<a name=\"hpo-HP.580011327\"> </a></td><td>Posterior plagiocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0007655<a name=\"hpo-HP.580007655\"> </a></td><td>Eversion of lateral third of lower eyelids</td></tr><tr><td style=\"white-space:nowrap\">HP:0010747<a name=\"hpo-HP.580010747\"> </a></td><td>Medial flaring of the eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0005957<a name=\"hpo-HP.580005957\"> </a></td><td>Breathing dysregulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000992<a name=\"hpo-HP.580000992\"> </a></td><td>Cutaneous photosensitivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0011995<a name=\"hpo-HP.580011995\"> </a></td><td>Atrial septal dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000377<a name=\"hpo-HP.580000377\"> </a></td><td>Abnormality of the pinna</td></tr><tr><td style=\"white-space:nowrap\">HP:0011266<a name=\"hpo-HP.580011266\"> </a></td><td>Microtia, first degree</td></tr><tr><td style=\"white-space:nowrap\">HP:0012650<a name=\"hpo-HP.580012650\"> </a></td><td>Perisylvian polymicrogyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0004970<a name=\"hpo-HP.580004970\"> </a></td><td>Ascending tubular aorta aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0008348<a name=\"hpo-HP.580008348\"> </a></td><td>Decreased circulating IgG2 level</td></tr><tr><td style=\"white-space:nowrap\">HP:0012115<a name=\"hpo-HP.580012115\"> </a></td><td>Hepatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006979<a name=\"hpo-HP.580006979\"> </a></td><td>Sleep-wake cycle disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0008587<a name=\"hpo-HP.580008587\"> </a></td><td>Mild neurosensory hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0006097<a name=\"hpo-HP.580006097\"> </a></td><td>3-4 finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005263<a name=\"hpo-HP.580005263\"> </a></td><td>Gastritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0200043<a name=\"hpo-HP.580200043\"> </a></td><td>Verrucae</td></tr><tr><td style=\"white-space:nowrap\">HP:0009600<a name=\"hpo-HP.580009600\"> </a></td><td>Flexion contracture of thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0010818<a name=\"hpo-HP.580010818\"> </a></td><td>Generalized tonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0002599<a name=\"hpo-HP.580002599\"> </a></td><td>Head titubation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002090<a name=\"hpo-HP.580002090\"> </a></td><td>Pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030423<a name=\"hpo-HP.580030423\"> </a></td><td>Splenic cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0030187<a name=\"hpo-HP.580030187\"> </a></td><td>Titubation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002375<a name=\"hpo-HP.580002375\"> </a></td><td>Hypokinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007166<a name=\"hpo-HP.580007166\"> </a></td><td>Paroxysmal dyskinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003077<a name=\"hpo-HP.580003077\"> </a></td><td>Hyperlipidemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000017<a name=\"hpo-HP.580000017\"> </a></td><td>Nocturia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100555<a name=\"hpo-HP.580100555\"> </a></td><td>Asymmetric growth</td></tr><tr><td style=\"white-space:nowrap\">HP:0011847<a name=\"hpo-HP.580011847\"> </a></td><td>Giant cell tumor of bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0000112<a name=\"hpo-HP.580000112\"> </a></td><td>Nephropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000246<a name=\"hpo-HP.580000246\"> </a></td><td>Sinusitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001012<a name=\"hpo-HP.580001012\"> </a></td><td>Multiple lipomas</td></tr><tr><td style=\"white-space:nowrap\">HP:0000851<a name=\"hpo-HP.580000851\"> </a></td><td>Congenital hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0002345<a name=\"hpo-HP.580002345\"> </a></td><td>Action tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002677<a name=\"hpo-HP.580002677\"> </a></td><td>Small foramen magnum</td></tr><tr><td style=\"white-space:nowrap\">HP:0011947<a name=\"hpo-HP.580011947\"> </a></td><td>Respiratory tract infection</td></tr><tr><td style=\"white-space:nowrap\">HP:0012151<a name=\"hpo-HP.580012151\"> </a></td><td>Hemothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0005988<a name=\"hpo-HP.580005988\"> </a></td><td>Congenital muscular torticollis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002329<a name=\"hpo-HP.580002329\"> </a></td><td>Drowsiness</td></tr><tr><td style=\"white-space:nowrap\">HP:0012395<a name=\"hpo-HP.580012395\"> </a></td><td>Seasonal allergy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011679<a name=\"hpo-HP.580011679\"> </a></td><td>Tetralogy of Fallot with pulmonary stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001864<a name=\"hpo-HP.580001864\"> </a></td><td>Clinodactyly of the 5th toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0006934<a name=\"hpo-HP.580006934\"> </a></td><td>Congenital nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0100355<a name=\"hpo-HP.580100355\"> </a></td><td>Contractures of the distal interphalangeal joint of the 5th toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0007894<a name=\"hpo-HP.580007894\"> </a></td><td>Hypopigmentation of the fundus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012377<a name=\"hpo-HP.580012377\"> </a></td><td>Hemianopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002354<a name=\"hpo-HP.580002354\"> </a></td><td>Memory impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000872<a name=\"hpo-HP.580000872\"> </a></td><td>Hashimoto thyroiditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002519<a name=\"hpo-HP.580002519\"> </a></td><td>Hypnagogic hallucinations</td></tr><tr><td style=\"white-space:nowrap\">HP:0010647<a name=\"hpo-HP.580010647\"> </a></td><td>Abnormal elasticity of skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0002592<a name=\"hpo-HP.580002592\"> </a></td><td>Gastric ulcer</td></tr><tr><td style=\"white-space:nowrap\">HP:0004938<a name=\"hpo-HP.580004938\"> </a></td><td>Tortuous cerebral arteries</td></tr><tr><td style=\"white-space:nowrap\">HP:0004948<a name=\"hpo-HP.580004948\"> </a></td><td>Vascular tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002516<a name=\"hpo-HP.580002516\"> </a></td><td>Increased intracranial pressure</td></tr><tr><td style=\"white-space:nowrap\">HP:0006460<a name=\"hpo-HP.580006460\"> </a></td><td>Increased laxity of ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0002317<a name=\"hpo-HP.580002317\"> </a></td><td>Unsteady gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0000182<a name=\"hpo-HP.580000182\"> </a></td><td>Movement abnormality of the tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0009887<a name=\"hpo-HP.580009887\"> </a></td><td>Abnormality of hair pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005824<a name=\"hpo-HP.580005824\"> </a></td><td>Clinodactyly of the 2nd toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002212<a name=\"hpo-HP.580002212\"> </a></td><td>Curly hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0009803<a name=\"hpo-HP.580009803\"> </a></td><td>Short phalanx of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0000572<a name=\"hpo-HP.580000572\"> </a></td><td>Visual loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0005216<a name=\"hpo-HP.580005216\"> </a></td><td>Impaired mastication</td></tr><tr><td style=\"white-space:nowrap\">HP:0000619<a name=\"hpo-HP.580000619\"> </a></td><td>Impaired convergence</td></tr><tr><td style=\"white-space:nowrap\">HP:0002403<a name=\"hpo-HP.580002403\"> </a></td><td>Positive Romberg sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0008744<a name=\"hpo-HP.580008744\"> </a></td><td>Abnormal aryepiglottic fold morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002374<a name=\"hpo-HP.580002374\"> </a></td><td>Diminished movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0008277<a name=\"hpo-HP.580008277\"> </a></td><td>Abnormal blood zinc concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0012781<a name=\"hpo-HP.580012781\"> </a></td><td>Mid-frequency hearing loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0100758<a name=\"hpo-HP.580100758\"> </a></td><td>Gangrene</td></tr><tr><td style=\"white-space:nowrap\">HP:0003256<a name=\"hpo-HP.580003256\"> </a></td><td>Abnormality of the coagulation cascade</td></tr><tr><td style=\"white-space:nowrap\">HP:0004387<a name=\"hpo-HP.580004387\"> </a></td><td>Enterocolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011029<a name=\"hpo-HP.580011029\"> </a></td><td>Internal hemorrhage</td></tr><tr><td style=\"white-space:nowrap\">HP:0011649<a name=\"hpo-HP.580011649\"> </a></td><td>Patent ductus arteriosus after premature birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0012050<a name=\"hpo-HP.580012050\"> </a></td><td>Anasarca</td></tr><tr><td style=\"white-space:nowrap\">HP:0001683<a name=\"hpo-HP.580001683\"> </a></td><td>Ectopia cordis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011682<a name=\"hpo-HP.580011682\"> </a></td><td>Perimembranous ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0010624<a name=\"hpo-HP.580010624\"> </a></td><td>Aplastic/hypoplastic toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002705<a name=\"hpo-HP.580002705\"> </a></td><td>High, narrow palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0011340<a name=\"hpo-HP.580011340\"> </a></td><td>Incomplete cleft of the upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0011613<a name=\"hpo-HP.580011613\"> </a></td><td>Interrupted aortic arch type B</td></tr><tr><td style=\"white-space:nowrap\">HP:0006167<a name=\"hpo-HP.580006167\"> </a></td><td>Prominent proximal interphalangeal joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0002918<a name=\"hpo-HP.580002918\"> </a></td><td>Hypermagnesemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011937<a name=\"hpo-HP.580011937\"> </a></td><td>Hypoplastic fifth toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0001067<a name=\"hpo-HP.580001067\"> </a></td><td>Neurofibromas</td></tr><tr><td style=\"white-space:nowrap\">HP:0011403<a name=\"hpo-HP.580011403\"> </a></td><td>Abnormal umbilical cord blood vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0003316<a name=\"hpo-HP.580003316\"> </a></td><td>Butterfly vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0002247<a name=\"hpo-HP.580002247\"> </a></td><td>Duodenal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008439<a name=\"hpo-HP.580008439\"> </a></td><td>Lumbar hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0011599<a name=\"hpo-HP.580011599\"> </a></td><td>Mesocardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008467<a name=\"hpo-HP.580008467\"> </a></td><td>Thoracic hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0004626<a name=\"hpo-HP.580004626\"> </a></td><td>Lumbar scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006808<a name=\"hpo-HP.580006808\"> </a></td><td>Cerebral hypomyelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0002926<a name=\"hpo-HP.580002926\"> </a></td><td>Abnormality of thyroid physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0007970<a name=\"hpo-HP.580007970\"> </a></td><td>Congenital ptosis</td></tr></table></div>" - }, - "url": "http://purl.obolibrary.org/obo/hp.owl", - "version": "0.2.0", - "name": "HPO", - "title": "Human Phenotype Ontology", - "status": "draft", - "experimental": false, - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "The Human Phenotype Ontology (HPO) provides a standardized vocabulary of phenotypic abnormalities encountered in human disease. Please see license of HPO at http://www.human-phenotype-ontology.org", - "valueSet": "http://fhir.ncpi-project-forge.io/ValueSet/phenotype-codes", - "hierarchyMeaning": "is-a", - "compositional": false, - "versionNeeded": false, - "content": "fragment", - "count": 1880, - "filter": [ - { - "code": "root", - "operator": [ - "=" - ], - "value": "True or false." - }, - { - "code": "deprecated", - "operator": [ - "=" - ], - "value": "True or false." - }, - { - "code": "imported", - "operator": [ - "=" - ], - "value": "True or false" - } - ], - "property": [ - { - "code": "parent", - "description": "Parent codes.", - "type": "code" - }, - { - "code": "imported", - "description": "Indicates if the concept is imported from another code system.", - "type": "boolean" - }, - { - "code": "root", - "description": "Indicates if this concept is a root concept (i.e. Thing is equivalent or a direct parent)", - "type": "boolean" - }, - { - "code": "deprecated", - "description": "Indicates if this concept is deprecated.", - "type": "boolean" - } - ], - "concept": [ - { - "code": "HP:0000365", - "display": "Hearing impairment" - }, - { - "code": "HP:0002564", - "display": "obsolete Malformation of the heart and great vessels" - }, - { - "code": "HP:0001028", - "display": "Hemangioma" - }, - { - "code": "HP:0000476", - "display": "Cystic hygroma" - }, - { - "code": "HP:0000568", - "display": "Microphthalmia" - }, - { - "code": "HP:0000518", - "display": "Cataract" - }, - { - "code": "HP:0000612", - "display": "Iris coloboma" - }, - { - "code": "HP:0000567", - "display": "Chorioretinal coloboma" - }, - { - "code": "HP:0000316", - "display": "Hypertelorism" - }, - { - "code": "HP:0000482", - "display": "Microcornea" - }, - { - "code": "HP:0000588", - "display": "Optic nerve coloboma" - }, - { - "code": "HP:0004426", - "display": "Abnormality of the cheek" - }, - { - "code": "HP:0009125", - "display": "Lipodystrophy" - }, - { - "code": "HP:0002023", - "display": "Anal atresia" - }, - { - "code": "HP:0003468", - "display": "Abnormal vertebral morphology" - }, - { - "code": "HP:0000545", - "display": "Myopia" - }, - { - "code": "HP:0000122", - "display": "Unilateral renal agenesis" - }, - { - "code": "HP:0002143", - "display": "Abnormality of the spinal cord" - }, - { - "code": "HP:0003508", - "display": "Proportionate short stature" - }, - { - "code": "HP:0000271", - "display": "Abnormality of the face" - }, - { - "code": "HP:0000637", - "display": "Long palpebral fissure" - }, - { - "code": "HP:0000492", - "display": "Abnormal eyelid morphology" - }, - { - "code": "HP:0000389", - "display": "Chronic otitis media" - }, - { - "code": "HP:0000400", - "display": "Macrotia" - }, - { - "code": "HP:0000405", - "display": "Conductive hearing impairment" - }, - { - "code": "HP:0012712", - "display": "Mild hearing impairment" - }, - { - "code": "HP:0005280", - "display": "Depressed nasal bridge" - }, - { - "code": "HP:0000431", - "display": "Wide nasal bridge" - }, - { - "code": "HP:0000319", - "display": "Smooth philtrum" - }, - { - "code": "HP:0000175", - "display": "Cleft palate" - }, - { - "code": "HP:0001611", - "display": "Nasal speech" - }, - { - "code": "HP:0002099", - "display": "Asthma" - }, - { - "code": "HP:0001397", - "display": "Hepatic steatosis" - }, - { - "code": "HP:0001081", - "display": "Cholelithiasis" - }, - { - "code": "HP:0002650", - "display": "Scoliosis" - }, - { - "code": "HP:0001212", - "display": "Prominent fingertip pads" - }, - { - "code": "HP:0001328", - "display": "Specific learning disability" - }, - { - "code": "HP:0000824", - "display": "Growth hormone deficiency" - }, - { - "code": "HP:0002607", - "display": "Bowel incontinence" - }, - { - "code": "HP:0100731", - "display": "Transverse facial cleft" - }, - { - "code": "HP:0000528", - "display": "Anophthalmia" - }, - { - "code": "HP:0000601", - "display": "Hypotelorism" - }, - { - "code": "HP:0000369", - "display": "Low-set ears" - }, - { - "code": "HP:0001274", - "display": "Agenesis of corpus callosum" - }, - { - "code": "HP:0002084", - "display": "Encephalocele" - }, - { - "code": "HP:0007033", - "display": "Cerebellar dysplasia" - }, - { - "code": "HP:0100336", - "display": "Bilateral cleft lip" - }, - { - "code": "HP:0100337", - "display": "Bilateral cleft palate" - }, - { - "code": "HP:0001511", - "display": "Intrauterine growth retardation" - }, - { - "code": "HP:0011451", - "display": "Congenital microcephaly" - }, - { - "code": "HP:0000324", - "display": "Facial asymmetry" - }, - { - "code": "HP:0000581", - "display": "Blepharophimosis" - }, - { - "code": "HP:0000508", - "display": "Ptosis" - }, - { - "code": "HP:0008551", - "display": "Microtia" - }, - { - "code": "HP:0001631", - "display": "Atrial septal defect" - }, - { - "code": "HP:0000085", - "display": "Horseshoe kidney" - }, - { - "code": "HP:0011927", - "display": "Short digit" - }, - { - "code": "HP:0001156", - "display": "Brachydactyly" - }, - { - "code": "HP:0002066", - "display": "Gait ataxia" - }, - { - "code": "HP:0001250", - "display": "Seizure" - }, - { - "code": "HP:0001263", - "display": "Global developmental delay" - }, - { - "code": "HP:0001562", - "display": "Oligohydramnios" - }, - { - "code": "HP:0001195", - "display": "Single umbilical artery" - }, - { - "code": "HP:0006349", - "display": "Agenesis of permanent teeth" - }, - { - "code": "HP:0000668", - "display": "Hypodontia" - }, - { - "code": "HP:0000677", - "display": "Oligodontia" - }, - { - "code": "HP:0001252", - "display": "Muscular hypotonia" - }, - { - "code": "HP:0003429", - "display": "CNS hypomyelination" - }, - { - "code": "HP:0010864", - "display": "Intellectual disability, severe" - }, - { - "code": "HP:0004325", - "display": "Decreased body weight" - }, - { - "code": "HP:0000666", - "display": "Horizontal nystagmus" - }, - { - "code": "HP:0000218", - "display": "High palate" - }, - { - "code": "HP:0010809", - "display": "Broad uvula" - }, - { - "code": "HP:0000767", - "display": "Pectus excavatum" - }, - { - "code": "HP:0003691", - "display": "Scapular winging" - }, - { - "code": "HP:0002616", - "display": "Aortic root aneurysm" - }, - { - "code": "HP:0001601", - "display": "Laryngomalacia" - }, - { - "code": "HP:0002021", - "display": "Pyloric stenosis" - }, - { - "code": "HP:0001388", - "display": "Joint laxity" - }, - { - "code": "HP:0001187", - "display": "Hyperextensibility of the finger joints" - }, - { - "code": "HP:0000741", - "display": "Apathy" - }, - { - "code": "HP:0000817", - "display": "Poor eye contact" - }, - { - "code": "HP:0000821", - "display": "Hypothyroidism" - }, - { - "code": "HP:0000002", - "display": "Abnormality of body height" - }, - { - "code": "HP:0000079", - "display": "Abnormality of the urinary system" - }, - { - "code": "HP:0000164", - "display": "Abnormality of the dentition" - }, - { - "code": "HP:0000364", - "display": "Hearing abnormality" - }, - { - "code": "HP:0000366", - "display": "Abnormality of the nose" - }, - { - "code": "HP:0000464", - "display": "Abnormality of the neck" - }, - { - "code": "HP:0000707", - "display": "Abnormality of the nervous system" - }, - { - "code": "HP:0000708", - "display": "Behavioral abnormality" - }, - { - "code": "HP:0000769", - "display": "Abnormality of the breast" - }, - { - "code": "HP:0000772", - "display": "Abnormality of the ribs" - }, - { - "code": "HP:0000775", - "display": "Abnormality of the diaphragm" - }, - { - "code": "HP:0000889", - "display": "Abnormality of the clavicle" - }, - { - "code": "HP:0000925", - "display": "Abnormality of the vertebral column" - }, - { - "code": "HP:0001080", - "display": "Biliary tract abnormality" - }, - { - "code": "HP:0001392", - "display": "Abnormality of the liver" - }, - { - "code": "HP:0001438", - "display": "Abnormal abdomen morphology" - }, - { - "code": "HP:0001608", - "display": "Abnormality of the voice" - }, - { - "code": "HP:0001627", - "display": "Abnormal heart morphology" - }, - { - "code": "HP:0001732", - "display": "Abnormality of the pancreas" - }, - { - "code": "HP:0001739", - "display": "Abnormality of the nasopharynx" - }, - { - "code": "HP:0001743", - "display": "Abnormality of the spleen" - }, - { - "code": "HP:0001760", - "display": "Abnormal foot morphology" - }, - { - "code": "HP:0001871", - "display": "Abnormality of blood and blood-forming tissues" - }, - { - "code": "HP:0002031", - "display": "Abnormal esophagus morphology" - }, - { - "code": "HP:0002244", - "display": "Abnormality of the small intestine" - }, - { - "code": "HP:0002246", - "display": "Abnormality of the duodenum" - }, - { - "code": "HP:0002250", - "display": "Abnormal large intestine morphology" - }, - { - "code": "HP:0002644", - "display": "Abnormality of pelvic girdle bone morphology" - }, - { - "code": "HP:0002664", - "display": "Neoplasm" - }, - { - "code": "HP:0002715", - "display": "Abnormality of the immune system" - }, - { - "code": "HP:0002814", - "display": "Abnormality of the lower limb" - }, - { - "code": "HP:0002817", - "display": "Abnormality of the upper limb" - }, - { - "code": "HP:0005483", - "display": "Abnormal epiglottis morphology" - }, - { - "code": "HP:0008777", - "display": "Abnormal vocal cord morphology" - }, - { - "code": "HP:0011844", - "display": "Abnormal appendicular skeleton morphology" - }, - { - "code": "HP:0012732", - "display": "Anorectal anomaly" - }, - { - "code": "HP:0001508", - "display": "Failure to thrive" - }, - { - "code": "HP:0002902", - "display": "Hyponatremia" - }, - { - "code": "HP:0012236", - "display": "Elevated sweat chloride" - }, - { - "code": "HP:0000347", - "display": "Micrognathia" - }, - { - "code": "HP:0000926", - "display": "Platyspondyly" - }, - { - "code": "HP:0001371", - "display": "Flexion contracture" - }, - { - "code": "HP:0001875", - "display": "Neutropenia" - }, - { - "code": "HP:0001888", - "display": "Lymphopenia" - }, - { - "code": "HP:0002857", - "display": "Genu valgum" - }, - { - "code": "HP:0002986", - "display": "Radial bowing" - }, - { - "code": "HP:0003015", - "display": "Flared metaphysis" - }, - { - "code": "HP:0003025", - "display": "Metaphyseal irregularity" - }, - { - "code": "HP:0003097", - "display": "Short femur" - }, - { - "code": "HP:0003300", - "display": "Ovoid vertebral bodies" - }, - { - "code": "HP:0003307", - "display": "Hyperlordosis" - }, - { - "code": "HP:0004209", - "display": "Clinodactyly of the 5th finger" - }, - { - "code": "HP:0004322", - "display": "Short stature" - }, - { - "code": "HP:0005792", - "display": "Short humerus" - }, - { - "code": "HP:0006248", - "display": "Limited wrist movement" - }, - { - "code": "HP:0000944", - "display": "Abnormality of the metaphysis" - }, - { - "code": "HP:0011921", - "display": "Exudative pleural effusion" - }, - { - "code": "HP:0003043", - "display": "Abnormality of the shoulder" - }, - { - "code": "HP:0000290", - "display": "Abnormality of the forehead" - }, - { - "code": "HP:0005288", - "display": "Abnormality of the nares" - }, - { - "code": "HP:0000234", - "display": "Abnormality of the head" - }, - { - "code": "HP:0004323", - "display": "Abnormality of body weight" - }, - { - "code": "HP:0000483", - "display": "Astigmatism" - }, - { - "code": "HP:0011003", - "display": "High myopia" - }, - { - "code": "HP:0000470", - "display": "Short neck" - }, - { - "code": "HP:0030044", - "display": "Flexion contracture of digit" - }, - { - "code": "HP:0100871", - "display": "Abnormality of the palm" - }, - { - "code": "HP:0004334", - "display": "Dermal atrophy" - }, - { - "code": "HP:0001845", - "display": "Overlapping toe" - }, - { - "code": "HP:0000496", - "display": "Abnormality of eye movement" - }, - { - "code": "HP:0001780", - "display": "Abnormality of toe" - }, - { - "code": "HP:0001626", - "display": "Abnormality of the cardiovascular system" - }, - { - "code": "HP:0002086", - "display": "Abnormality of the respiratory system" - }, - { - "code": "HP:0000818", - "display": "Abnormality of the endocrine system" - }, - { - "code": "HP:0012372", - "display": "Abnormal eye morphology" - }, - { - "code": "HP:0009473", - "display": "Joint contracture of the hand" - }, - { - "code": "HP:0003199", - "display": "Decreased muscle mass" - }, - { - "code": "HP:0003202", - "display": "Skeletal muscle atrophy" - }, - { - "code": "HP:0003551", - "display": "Difficulty climbing stairs" - }, - { - "code": "HP:0002355", - "display": "Difficulty walking" - }, - { - "code": "HP:0003546", - "display": "Exercise intolerance" - }, - { - "code": "HP:0003325", - "display": "Limb-girdle muscle weakness" - }, - { - "code": "HP:0003701", - "display": "Proximal muscle weakness" - }, - { - "code": "HP:0003547", - "display": "Shoulder girdle muscle weakness" - }, - { - "code": "HP:0007340", - "display": "Lower limb muscle weakness" - }, - { - "code": "HP:0002168", - "display": "Scanning speech" - }, - { - "code": "HP:0001265", - "display": "Hyporeflexia" - }, - { - "code": "HP:0001284", - "display": "Areflexia" - }, - { - "code": "HP:0003477", - "display": "Peripheral axonal neuropathy" - }, - { - "code": "HP:0000924", - "display": "Abnormality of the skeletal system" - }, - { - "code": "HP:0001291", - "display": "Abnormal cranial nerve morphology" - }, - { - "code": "HP:0003687", - "display": "Centrally nucleated skeletal muscle fibers" - }, - { - "code": "HP:0001324", - "display": "Muscle weakness" - }, - { - "code": "HP:0002515", - "display": "Waddling gait" - }, - { - "code": "HP:0100280", - "display": "Crohn's disease" - }, - { - "code": "HP:0002631", - "display": "obsolete Dilatation of ascending aorta" - }, - { - "code": "HP:0100026", - "display": "Arteriovenous malformation" - }, - { - "code": "HP:0002637", - "display": "Cerebral ischemia" - }, - { - "code": "HP:0002619", - "display": "Varicose veins" - }, - { - "code": "HP:0001159", - "display": "Syndactyly" - }, - { - "code": "HP:0002069", - "display": "Bilateral tonic-clonic seizure" - }, - { - "code": "HP:0000977", - "display": "Soft skin" - }, - { - "code": "HP:0010648", - "display": "Dermal translucency" - }, - { - "code": "HP:0000978", - "display": "Bruising susceptibility" - }, - { - "code": "HP:0001956", - "display": "Truncal obesity" - }, - { - "code": "HP:0000189", - "display": "Narrow palate" - }, - { - "code": "HP:0000678", - "display": "Dental crowding" - }, - { - "code": "HP:0002870", - "display": "Obstructive sleep apnea" - }, - { - "code": "HP:0001763", - "display": "Pes planus" - }, - { - "code": "HP:0000782", - "display": "Abnormality of the scapula" - }, - { - "code": "HP:0001600", - "display": "Abnormality of the larynx" - }, - { - "code": "HP:0002088", - "display": "Abnormal lung morphology" - }, - { - "code": "HP:0011407", - "display": "Proportionate tall stature" - }, - { - "code": "HP:0000541", - "display": "Retinal detachment" - }, - { - "code": "HP:0001373", - "display": "Joint dislocation" - }, - { - "code": "HP:0000938", - "display": "Osteopenia" - }, - { - "code": "HP:0002942", - "display": "Thoracic kyphosis" - }, - { - "code": "HP:0001840", - "display": "Metatarsus adductus" - }, - { - "code": "HP:0001844", - "display": "Abnormality of the hallux" - }, - { - "code": "HP:0001765", - "display": "Hammertoe" - }, - { - "code": "HP:0000606", - "display": "Abnormality of the periorbital region" - }, - { - "code": "HP:0002757", - "display": "Recurrent fractures" - }, - { - "code": "HP:0000647", - "display": "Sclerocornea" - }, - { - "code": "HP:0001166", - "display": "Arachnodactyly" - }, - { - "code": "HP:0005490", - "display": "Postnatal macrocephaly" - }, - { - "code": "HP:0011363", - "display": "Abnormality of hair growth rate" - }, - { - "code": "HP:0000276", - "display": "Long face" - }, - { - "code": "HP:0000275", - "display": "Narrow face" - }, - { - "code": "HP:0000337", - "display": "Broad forehead" - }, - { - "code": "HP:0002267", - "display": "Exaggerated startle response" - }, - { - "code": "HP:0002187", - "display": "Intellectual disability, profound" - }, - { - "code": "HP:0000728", - "display": "Impaired ability to form peer relationships" - }, - { - "code": "HP:0000733", - "display": "Stereotypy" - }, - { - "code": "HP:0000739", - "display": "Anxiety" - }, - { - "code": "HP:0000929", - "display": "Abnormal skull morphology" - }, - { - "code": "HP:0001965", - "display": "Abnormal scalp morphology" - }, - { - "code": "HP:0100538", - "display": "Abnormality of the supraorbital ridges" - }, - { - "code": "HP:0000309", - "display": "Abnormality of the midface" - }, - { - "code": "HP:0000277", - "display": "Abnormality of the mandible" - }, - { - "code": "HP:0000765", - "display": "Abnormality of the thorax" - }, - { - "code": "HP:0100008", - "display": "Schwannoma" - }, - { - "code": "HP:0030038", - "display": "Enchondroma" - }, - { - "code": "HP:0100777", - "display": "Exostoses" - }, - { - "code": "HP:0011663", - "display": "Right ventricular cardiomyopathy" - }, - { - "code": "HP:0011675", - "display": "Arrhythmia" - }, - { - "code": "HP:0001962", - "display": "Palpitations" - }, - { - "code": "HP:0001279", - "display": "Syncope" - }, - { - "code": "HP:0004756", - "display": "Ventricular tachycardia" - }, - { - "code": "HP:0000252", - "display": "Microcephaly" - }, - { - "code": "HP:0000303", - "display": "Mandibular prognathia" - }, - { - "code": "HP:0000664", - "display": "Synophrys" - }, - { - "code": "HP:0001609", - "display": "Hoarse voice" - }, - { - "code": "HP:0002558", - "display": "Supernumerary nipple" - }, - { - "code": "HP:0001634", - "display": "Mitral valve prolapse" - }, - { - "code": "HP:0000028", - "display": "Cryptorchidism" - }, - { - "code": "HP:0000973", - "display": "Cutis laxa" - }, - { - "code": "HP:0001518", - "display": "Small for gestational age" - }, - { - "code": "HP:0000527", - "display": "Long eyelashes" - }, - { - "code": "HP:0002808", - "display": "Kyphosis" - }, - { - "code": "HP:0000248", - "display": "Brachycephaly" - }, - { - "code": "HP:0000505", - "display": "Visual impairment" - }, - { - "code": "HP:0000512", - "display": "Abnormal electroretinogram" - }, - { - "code": "HP:0000517", - "display": "Abnormality of the lens" - }, - { - "code": "HP:0000529", - "display": "Progressive visual loss" - }, - { - "code": "HP:0000586", - "display": "Shallow orbits" - }, - { - "code": "HP:0000603", - "display": "Central scotoma" - }, - { - "code": "HP:0000939", - "display": "Osteoporosis" - }, - { - "code": "HP:0001377", - "display": "Limited elbow extension" - }, - { - "code": "HP:0001387", - "display": "Joint stiffness" - }, - { - "code": "HP:0001822", - "display": "Hallux valgus" - }, - { - "code": "HP:0002657", - "display": "Spondylometaphyseal dysplasia" - }, - { - "code": "HP:0003026", - "display": "Short long bone" - }, - { - "code": "HP:0006462", - "display": "Generalized bone demineralization" - }, - { - "code": "HP:0008873", - "display": "Disproportionate short-limb short stature" - }, - { - "code": "HP:0008905", - "display": "Rhizomelia" - }, - { - "code": "HP:0008922", - "display": "Childhood-onset short-trunk short stature" - }, - { - "code": "HP:0200020", - "display": "Corneal erosion" - }, - { - "code": "HP:0001172", - "display": "Abnormal thumb morphology" - }, - { - "code": "HP:0002286", - "display": "Fair hair" - }, - { - "code": "HP:0010719", - "display": "Abnormality of hair texture" - }, - { - "code": "HP:0010720", - "display": "Abnormal hair pattern" - }, - { - "code": "HP:0001635", - "display": "Congestive heart failure" - }, - { - "code": "HP:0001644", - "display": "Dilated cardiomyopathy" - }, - { - "code": "HP:0001663", - "display": "Ventricular fibrillation" - }, - { - "code": "HP:0011712", - "display": "Right bundle branch block" - }, - { - "code": "HP:0000272", - "display": "Malar flattening" - }, - { - "code": "HP:0000286", - "display": "Epicanthus" - }, - { - "code": "HP:0000322", - "display": "Short philtrum" - }, - { - "code": "HP:0000463", - "display": "Anteverted nares" - }, - { - "code": "HP:0000494", - "display": "Downslanted palpebral fissures" - }, - { - "code": "HP:0000543", - "display": "Optic disc pallor" - }, - { - "code": "HP:0000699", - "display": "Diastema" - }, - { - "code": "HP:0000773", - "display": "Short ribs" - }, - { - "code": "HP:0000887", - "display": "Cupped ribs" - }, - { - "code": "HP:0000946", - "display": "Hypoplastic ilia" - }, - { - "code": "HP:0000954", - "display": "Single transverse palmar crease" - }, - { - "code": "HP:0001182", - "display": "Tapered finger" - }, - { - "code": "HP:0001537", - "display": "Umbilical hernia" - }, - { - "code": "HP:0002007", - "display": "Frontal bossing" - }, - { - "code": "HP:0002980", - "display": "Femoral bowing" - }, - { - "code": "HP:0002982", - "display": "Tibial bowing" - }, - { - "code": "HP:0003021", - "display": "Metaphyseal cupping" - }, - { - "code": "HP:0005011", - "display": "Mesomelic arm shortening" - }, - { - "code": "HP:0008803", - "display": "obsolete Narrow sacroiliac notch" - }, - { - "code": "HP:0009117", - "display": "Aplasia/Hypoplasia of the maxilla" - }, - { - "code": "HP:0011220", - "display": "Prominent forehead" - }, - { - "code": "HP:0012801", - "display": "Narrow jaw" - }, - { - "code": "HP:0000243", - "display": "Trigonocephaly" - }, - { - "code": "HP:0000358", - "display": "Posteriorly rotated ears" - }, - { - "code": "HP:0000411", - "display": "Protruding ear" - }, - { - "code": "HP:0000646", - "display": "Amblyopia" - }, - { - "code": "HP:0002812", - "display": "Coxa vara" - }, - { - "code": "HP:0002970", - "display": "Genu varum" - }, - { - "code": "HP:0012775", - "display": "Stellate iris" - }, - { - "code": "HP:0000278", - "display": "Retrognathia" - }, - { - "code": "HP:0009796", - "display": "Branchial cyst" - }, - { - "code": "HP:0002474", - "display": "Expressive language delay" - }, - { - "code": "HP:0007018", - "display": "Attention deficit hyperactivity disorder" - }, - { - "code": "HP:0003198", - "display": "Myopathy" - }, - { - "code": "HP:0003324", - "display": "Generalized muscle weakness" - }, - { - "code": "HP:0003552", - "display": "Muscle stiffness" - }, - { - "code": "HP:0003554", - "display": "Type 2 muscle fiber atrophy" - }, - { - "code": "HP:0003557", - "display": "Increased variability in muscle fiber diameter" - }, - { - "code": "HP:0009025", - "display": "Increased connective tissue" - }, - { - "code": "HP:0003635", - "display": "Loss of subcutaneous adipose tissue in limbs" - }, - { - "code": "HP:0002597", - "display": "Abnormality of the vasculature" - }, - { - "code": "HP:0001649", - "display": "Tachycardia" - }, - { - "code": "HP:0001638", - "display": "Cardiomyopathy" - }, - { - "code": "HP:0001654", - "display": "Abnormal heart valve morphology" - }, - { - "code": "HP:0001671", - "display": "Abnormal cardiac septum morphology" - }, - { - "code": "HP:0000103", - "display": "Polyuria" - }, - { - "code": "HP:0000114", - "display": "Proximal tubulopathy" - }, - { - "code": "HP:0001878", - "display": "Hemolytic anemia" - }, - { - "code": "HP:0001931", - "display": "Hypochromic anemia" - }, - { - "code": "HP:0001935", - "display": "Microcytic anemia" - }, - { - "code": "HP:0001959", - "display": "Polydipsia" - }, - { - "code": "HP:0001994", - "display": "Renal Fanconi syndrome" - }, - { - "code": "HP:0002134", - "display": "Abnormality of the basal ganglia" - }, - { - "code": "HP:0002188", - "display": "Delayed CNS myelination" - }, - { - "code": "HP:0002908", - "display": "Conjugated hyperbilirubinemia" - }, - { - "code": "HP:0003774", - "display": "Stage 5 chronic kidney disease" - }, - { - "code": "HP:0010700", - "display": "obsolete Total cataract" - }, - { - "code": "HP:0000193", - "display": "Bifid uvula" - }, - { - "code": "HP:0000219", - "display": "Thin upper lip vermilion" - }, - { - "code": "HP:0000426", - "display": "Prominent nasal bridge" - }, - { - "code": "HP:0000452", - "display": "Choanal stenosis" - }, - { - "code": "HP:0000490", - "display": "Deeply set eye" - }, - { - "code": "HP:0000540", - "display": "Hypermetropia" - }, - { - "code": "HP:0000579", - "display": "Nasolacrimal duct obstruction" - }, - { - "code": "HP:0000684", - "display": "Delayed eruption of teeth" - }, - { - "code": "HP:0000960", - "display": "Sacral dimple" - }, - { - "code": "HP:0000998", - "display": "Hypertrichosis" - }, - { - "code": "HP:0001643", - "display": "Patent ductus arteriosus" - }, - { - "code": "HP:0010813", - "display": "Abnormal number of hair whorls" - }, - { - "code": "HP:0012384", - "display": "Rhinitis" - }, - { - "code": "HP:0012745", - "display": "Short palpebral fissure" - }, - { - "code": "HP:0000359", - "display": "Abnormality of the inner ear" - }, - { - "code": "HP:0000429", - "display": "Abnormality of the nasal alae" - }, - { - "code": "HP:0000436", - "display": "Abnormality of the nasal tip" - }, - { - "code": "HP:0000499", - "display": "Abnormal eyelash morphology" - }, - { - "code": "HP:0000534", - "display": "Abnormal eyebrow morphology" - }, - { - "code": "HP:0000951", - "display": "Abnormality of the skin" - }, - { - "code": "HP:0001000", - "display": "Abnormality of skin pigmentation" - }, - { - "code": "HP:0001597", - "display": "Abnormality of the nail" - }, - { - "code": "HP:0006483", - "display": "Abnormal number of teeth" - }, - { - "code": "HP:0009929", - "display": "Abnormality of the columella" - }, - { - "code": "HP:0011119", - "display": "Abnormality of the nasal dorsum" - }, - { - "code": "HP:0012808", - "display": "Abnormal nasal base" - }, - { - "code": "HP:0100490", - "display": "Camptodactyly of finger" - }, - { - "code": "HP:0000964", - "display": "Eczema" - }, - { - "code": "HP:0004442", - "display": "Sagittal craniosynostosis" - }, - { - "code": "HP:0000414", - "display": "Bulbous nose" - }, - { - "code": "HP:0003180", - "display": "Flat acetabular roof" - }, - { - "code": "HP:0000422", - "display": "Abnormality of the nasal bridge" - }, - { - "code": "HP:0000614", - "display": "Abnormal nasolacrimal system morphology" - }, - { - "code": "HP:0001167", - "display": "Abnormality of finger" - }, - { - "code": "HP:0001595", - "display": "Abnormal hair morphology" - }, - { - "code": "HP:0012373", - "display": "Abnormal eye physiology" - }, - { - "code": "HP:0001655", - "display": "Patent foramen ovale" - }, - { - "code": "HP:0001647", - "display": "Bicuspid aortic valve" - }, - { - "code": "HP:0000574", - "display": "Thick eyebrow" - }, - { - "code": "HP:0001169", - "display": "Broad palm" - }, - { - "code": "HP:0006471", - "display": "Fixed elbow flexion" - }, - { - "code": "HP:0008689", - "display": "Bilateral cryptorchidism" - }, - { - "code": "HP:0011304", - "display": "Broad thumb" - }, - { - "code": "HP:0005110", - "display": "Atrial fibrillation" - }, - { - "code": "HP:0001633", - "display": "Abnormal mitral valve morphology" - }, - { - "code": "HP:0001641", - "display": "Abnormal pulmonary valve morphology" - }, - { - "code": "HP:0001702", - "display": "Abnormal tricuspid valve morphology" - }, - { - "code": "HP:0000012", - "display": "Urinary urgency" - }, - { - "code": "HP:0000020", - "display": "Urinary incontinence" - }, - { - "code": "HP:0000131", - "display": "Uterine leiomyoma" - }, - { - "code": "HP:0000132", - "display": "Menorrhagia" - }, - { - "code": "HP:0000138", - "display": "Ovarian cyst" - }, - { - "code": "HP:0000853", - "display": "Goiter" - }, - { - "code": "HP:0000953", - "display": "Hyperpigmentation of the skin" - }, - { - "code": "HP:0001061", - "display": "Acne" - }, - { - "code": "HP:0002315", - "display": "Headache" - }, - { - "code": "HP:0004324", - "display": "Increased body weight" - }, - { - "code": "HP:0000069", - "display": "Abnormality of the ureter" - }, - { - "code": "HP:0000077", - "display": "Abnormality of the kidney" - }, - { - "code": "HP:0000759", - "display": "Abnormal peripheral nervous system morphology" - }, - { - "code": "HP:0008069", - "display": "Neoplasm of the skin" - }, - { - "code": "HP:0011276", - "display": "Vascular skin abnormality" - }, - { - "code": "HP:0000705", - "display": "Amelogenesis imperfecta" - }, - { - "code": "HP:0001256", - "display": "Intellectual disability, mild" - }, - { - "code": "HP:0000325", - "display": "Triangular face" - }, - { - "code": "HP:0000160", - "display": "Narrow mouth" - }, - { - "code": "HP:0009487", - "display": "Ulnar deviation of the hand" - }, - { - "code": "HP:0001249", - "display": "Intellectual disability" - }, - { - "code": "HP:0008064", - "display": "Ichthyosis" - }, - { - "code": "HP:0000311", - "display": "Round face" - }, - { - "code": "HP:0001653", - "display": "Mitral regurgitation" - }, - { - "code": "HP:0001771", - "display": "Achilles tendon contracture" - }, - { - "code": "HP:0012032", - "display": "Lipoma" - }, - { - "code": "HP:0012368", - "display": "Flat face" - }, - { - "code": "HP:0030053", - "display": "Stiff skin" - }, - { - "code": "HP:0011124", - "display": "Abnormality of epidermal morphology" - }, - { - "code": "HP:0011097", - "display": "Epileptic spasm" - }, - { - "code": "HP:0000407", - "display": "Sensorineural hearing impairment" - }, - { - "code": "HP:0000331", - "display": "Short chin" - }, - { - "code": "HP:0000340", - "display": "Sloping forehead" - }, - { - "code": "HP:0000486", - "display": "Strabismus" - }, - { - "code": "HP:0000713", - "display": "Agitation" - }, - { - "code": "HP:0000802", - "display": "Impotence" - }, - { - "code": "HP:0001272", - "display": "Cerebellar atrophy" - }, - { - "code": "HP:0001276", - "display": "Hypertonia" - }, - { - "code": "HP:0001321", - "display": "Cerebellar hypoplasia" - }, - { - "code": "HP:0001322", - "display": "obsolete Brain very small" - }, - { - "code": "HP:0002061", - "display": "Lower limb spasticity" - }, - { - "code": "HP:0002529", - "display": "Neuronal loss in central nervous system" - }, - { - "code": "HP:0002540", - "display": "Inability to walk" - }, - { - "code": "HP:0005484", - "display": "Postnatal microcephaly" - }, - { - "code": "HP:0012850", - "display": "Small intestinal dysmotility" - }, - { - "code": "HP:0000504", - "display": "Abnormality of vision" - }, - { - "code": "HP:0002118", - "display": "Abnormality of the cerebral ventricles" - }, - { - "code": "HP:0002363", - "display": "Abnormality of brainstem morphology" - }, - { - "code": "HP:0010651", - "display": "Abnormal meningeal morphology" - }, - { - "code": "HP:0100024", - "display": "Conspicuously happy disposition" - }, - { - "code": "HP:0002538", - "display": "Abnormality of the cerebral cortex" - }, - { - "code": "HP:0000054", - "display": "Micropenis" - }, - { - "code": "HP:0000215", - "display": "Thick upper lip vermilion" - }, - { - "code": "HP:0000293", - "display": "Full cheeks" - }, - { - "code": "HP:0000349", - "display": "Widow's peak" - }, - { - "code": "HP:0000444", - "display": "Convex nasal ridge" - }, - { - "code": "HP:0000506", - "display": "Telecanthus" - }, - { - "code": "HP:0000592", - "display": "Blue sclerae" - }, - { - "code": "HP:0000691", - "display": "Microdontia" - }, - { - "code": "HP:0000698", - "display": "Conical tooth" - }, - { - "code": "HP:0002000", - "display": "Short columella" - }, - { - "code": "HP:0002097", - "display": "Emphysema" - }, - { - "code": "HP:0002209", - "display": "Sparse scalp hair" - }, - { - "code": "HP:0002816", - "display": "Genu recurvatum" - }, - { - "code": "HP:0005116", - "display": "Arterial tortuosity" - }, - { - "code": "HP:0007957", - "display": "Corneal opacity" - }, - { - "code": "HP:0008070", - "display": "Sparse hair" - }, - { - "code": "HP:0009623", - "display": "Proximal placement of thumb" - }, - { - "code": "HP:0010055", - "display": "Broad hallux" - }, - { - "code": "HP:0011318", - "display": "Bicoronal synostosis" - }, - { - "code": "HP:0011968", - "display": "Feeding difficulties" - }, - { - "code": "HP:0200067", - "display": "Recurrent spontaneous abortion" - }, - { - "code": "HP:0011819", - "display": "Submucous cleft soft palate" - }, - { - "code": "HP:0000268", - "display": "Dolichocephaly" - }, - { - "code": "HP:0003302", - "display": "Spondylolisthesis" - }, - { - "code": "HP:0000582", - "display": "Upslanted palpebral fissure" - }, - { - "code": "HP:0000952", - "display": "Jaundice" - }, - { - "code": "HP:0001298", - "display": "Encephalopathy" - }, - { - "code": "HP:0001396", - "display": "Cholestasis" - }, - { - "code": "HP:0002059", - "display": "Cerebral atrophy" - }, - { - "code": "HP:0002171", - "display": "Gliosis" - }, - { - "code": "HP:0002240", - "display": "Hepatomegaly" - }, - { - "code": "HP:0002353", - "display": "EEG abnormality" - }, - { - "code": "HP:0002446", - "display": "Astrocytosis" - }, - { - "code": "HP:0003287", - "display": "Abnormality of mitochondrial metabolism" - }, - { - "code": "HP:0011449", - "display": "Knee clonus" - }, - { - "code": "HP:0012852", - "display": "Hepatic bridging fibrosis" - }, - { - "code": "HP:0100626", - "display": "Chronic hepatic failure" - }, - { - "code": "HP:0000385", - "display": "Small earlobe" - }, - { - "code": "HP:0009748", - "display": "Large earlobe" - }, - { - "code": "HP:0000157", - "display": "Abnormality of the tongue" - }, - { - "code": "HP:0000172", - "display": "Abnormality of the uvula" - }, - { - "code": "HP:0000174", - "display": "Abnormal palate morphology" - }, - { - "code": "HP:0000306", - "display": "Abnormality of the chin" - }, - { - "code": "HP:0004408", - "display": "Abnormality of the sense of smell" - }, - { - "code": "HP:0009912", - "display": "Abnormality of the tragus" - }, - { - "code": "HP:0000537", - "display": "Epicanthus inversus" - }, - { - "code": "HP:0000565", - "display": "Esotropia" - }, - { - "code": "HP:0000752", - "display": "Hyperactivity" - }, - { - "code": "HP:0003186", - "display": "Inverted nipples" - }, - { - "code": "HP:0012503", - "display": "Abnormality of the pituitary gland" - }, - { - "code": "HP:0100710", - "display": "Impulsivity" - }, - { - "code": "HP:0000357", - "display": "Abnormal location of ears" - }, - { - "code": "HP:0000820", - "display": "Abnormality of the thyroid gland" - }, - { - "code": "HP:0000828", - "display": "Abnormality of the parathyroid gland" - }, - { - "code": "HP:0000834", - "display": "Abnormality of the adrenal glands" - }, - { - "code": "HP:0012093", - "display": "Abnormality of endocrine pancreas physiology" - }, - { - "code": "HP:0000269", - "display": "Prominent occiput" - }, - { - "code": "HP:0000535", - "display": "Sparse and thin eyebrow" - }, - { - "code": "HP:0000639", - "display": "Nystagmus" - }, - { - "code": "HP:0000718", - "display": "Aggressive behavior" - }, - { - "code": "HP:0000957", - "display": "Cafe-au-lait spot" - }, - { - "code": "HP:0000256", - "display": "Macrocephaly" - }, - { - "code": "HP:0000750", - "display": "Delayed speech and language development" - }, - { - "code": "HP:0000963", - "display": "Thin skin" - }, - { - "code": "HP:0001260", - "display": "Dysarthria" - }, - { - "code": "HP:0002194", - "display": "Delayed gross motor development" - }, - { - "code": "HP:0003196", - "display": "Short nose" - }, - { - "code": "HP:0001155", - "display": "Abnormality of the hand" - }, - { - "code": "HP:0100022", - "display": "Abnormality of movement" - }, - { - "code": "HP:0010862", - "display": "Delayed fine motor development" - }, - { - "code": "HP:0000343", - "display": "Long philtrum" - }, - { - "code": "HP:0000717", - "display": "Autism" - }, - { - "code": "HP:0001883", - "display": "Talipes" - }, - { - "code": "HP:0002553", - "display": "Highly arched eyebrow" - }, - { - "code": "HP:0007488", - "display": "Diffuse skin atrophy" - }, - { - "code": "HP:0000822", - "display": "Hypertension" - }, - { - "code": "HP:0001278", - "display": "Orthostatic hypotension" - }, - { - "code": "HP:0001944", - "display": "Dehydration" - }, - { - "code": "HP:0001945", - "display": "Fever" - }, - { - "code": "HP:0002019", - "display": "Constipation" - }, - { - "code": "HP:0002020", - "display": "Gastroesophageal reflux" - }, - { - "code": "HP:0002027", - "display": "Abdominal pain" - }, - { - "code": "HP:0002718", - "display": "Recurrent bacterial infections" - }, - { - "code": "HP:0002841", - "display": "Recurrent fungal infections" - }, - { - "code": "HP:0004395", - "display": "Malnutrition" - }, - { - "code": "HP:0009830", - "display": "Peripheral neuropathy" - }, - { - "code": "HP:0000126", - "display": "Hydronephrosis" - }, - { - "code": "HP:0000519", - "display": "Developmental cataract" - }, - { - "code": "HP:0000648", - "display": "Optic atrophy" - }, - { - "code": "HP:0001053", - "display": "Hypopigmented skin patches" - }, - { - "code": "HP:0001087", - "display": "Developmental glaucoma" - }, - { - "code": "HP:0002119", - "display": "Ventriculomegaly" - }, - { - "code": "HP:0002280", - "display": "Enlarged cisterna magna" - }, - { - "code": "HP:0003298", - "display": "Spina bifida occulta" - }, - { - "code": "HP:0004467", - "display": "Preauricular pit" - }, - { - "code": "HP:0008511", - "display": "Central posterior corneal opacity" - }, - { - "code": "HP:0010780", - "display": "Hyperacusis" - }, - { - "code": "HP:0030048", - "display": "Colpocephaly" - }, - { - "code": "HP:0100335", - "display": "Non-midline cleft lip" - }, - { - "code": "HP:0000525", - "display": "Abnormality iris morphology" - }, - { - "code": "HP:0002719", - "display": "Recurrent infections" - }, - { - "code": "HP:0000153", - "display": "Abnormality of the mouth" - }, - { - "code": "HP:0001903", - "display": "Anemia" - }, - { - "code": "HP:0002094", - "display": "Dyspnea" - }, - { - "code": "HP:0002206", - "display": "Pulmonary fibrosis" - }, - { - "code": "HP:0002789", - "display": "Tachypnea" - }, - { - "code": "HP:0002793", - "display": "Abnormal pattern of respiration" - }, - { - "code": "HP:0003565", - "display": "Elevated erythrocyte sedimentation rate" - }, - { - "code": "HP:0006517", - "display": "Intraalveolar phospholipid accumulation" - }, - { - "code": "HP:0006530", - "display": "Interstitial pulmonary abnormality" - }, - { - "code": "HP:0100759", - "display": "Clubbing of fingers" - }, - { - "code": "HP:0002103", - "display": "Abnormal pleura morphology" - }, - { - "code": "HP:0001596", - "display": "Alopecia" - }, - { - "code": "HP:0001882", - "display": "Leukopenia" - }, - { - "code": "HP:0002013", - "display": "Vomiting" - }, - { - "code": "HP:0002028", - "display": "Chronic diarrhea" - }, - { - "code": "HP:0002573", - "display": "Hematochezia" - }, - { - "code": "HP:0002960", - "display": "Autoimmunity" - }, - { - "code": "HP:0005387", - "display": "Combined immunodeficiency" - }, - { - "code": "HP:0011109", - "display": "Chronic sinusitis" - }, - { - "code": "HP:0004429", - "display": "Recurrent viral infections" - }, - { - "code": "HP:0000280", - "display": "Coarse facial features" - }, - { - "code": "HP:0000294", - "display": "Low anterior hairline" - }, - { - "code": "HP:0000577", - "display": "Exotropia" - }, - { - "code": "HP:0001873", - "display": "Thrombocytopenia" - }, - { - "code": "HP:0002011", - "display": "Morphological central nervous system abnormality" - }, - { - "code": "HP:0006610", - "display": "Wide intermamillary distance" - }, - { - "code": "HP:0011231", - "display": "Prominent eyelashes" - }, - { - "code": "HP:0012718", - "display": "Morphological abnormality of the gastrointestinal tract" - }, - { - "code": "HP:0002024", - "display": "Malabsorption" - }, - { - "code": "HP:0001394", - "display": "Cirrhosis" - }, - { - "code": "HP:0001414", - "display": "Microvesicular hepatic steatosis" - }, - { - "code": "HP:0001403", - "display": "Macrovesicular hepatic steatosis" - }, - { - "code": "HP:0001410", - "display": "Decreased liver function" - }, - { - "code": "HP:0001409", - "display": "Portal hypertension" - }, - { - "code": "HP:0001744", - "display": "Splenomegaly" - }, - { - "code": "HP:0003394", - "display": "Muscle spasm" - }, - { - "code": "HP:0003750", - "display": "Increased muscle fatiguability" - }, - { - "code": "HP:0002123", - "display": "Generalized myoclonic seizure" - }, - { - "code": "HP:0002219", - "display": "Facial hypertrichosis" - }, - { - "code": "HP:0000831", - "display": "Insulin-resistant diabetes mellitus" - }, - { - "code": "HP:0001891", - "display": "Iron deficiency anemia" - }, - { - "code": "HP:0001264", - "display": "Spastic diplegia" - }, - { - "code": "HP:0002313", - "display": "Spastic paraparesis" - }, - { - "code": "HP:0001347", - "display": "Hyperreflexia" - }, - { - "code": "HP:0002460", - "display": "Distal muscle weakness" - }, - { - "code": "HP:0000763", - "display": "Sensory neuropathy" - }, - { - "code": "HP:0001268", - "display": "Mental deterioration" - }, - { - "code": "HP:0002169", - "display": "Clonus" - }, - { - "code": "HP:0001332", - "display": "Dystonia" - }, - { - "code": "HP:0100716", - "display": "Self-injurious behavior" - }, - { - "code": "HP:0000602", - "display": "Ophthalmoplegia" - }, - { - "code": "HP:0001251", - "display": "Ataxia" - }, - { - "code": "HP:0000776", - "display": "Congenital diaphragmatic hernia" - }, - { - "code": "HP:0000410", - "display": "Mixed hearing impairment" - }, - { - "code": "HP:0000510", - "display": "Rod-cone dystrophy" - }, - { - "code": "HP:0004437", - "display": "Cranial hyperostosis" - }, - { - "code": "HP:0011001", - "display": "Increased bone mineral density" - }, - { - "code": "HP:0000956", - "display": "Acanthosis nigricans" - }, - { - "code": "HP:0000958", - "display": "Dry skin" - }, - { - "code": "HP:0000580", - "display": "Pigmentary retinopathy" - }, - { - "code": "HP:0000649", - "display": "Abnormality of visual evoked potentials" - }, - { - "code": "HP:0000657", - "display": "Oculomotor apraxia" - }, - { - "code": "HP:0000479", - "display": "Abnormal retinal morphology" - }, - { - "code": "HP:0001317", - "display": "Abnormal cerebellum morphology" - }, - { - "code": "HP:0001533", - "display": "Slender build" - }, - { - "code": "HP:0001629", - "display": "Ventricular septal defect" - }, - { - "code": "HP:0000703", - "display": "Dentinogenesis imperfecta" - }, - { - "code": "HP:0000914", - "display": "Shield chest" - }, - { - "code": "HP:0001500", - "display": "Broad finger" - }, - { - "code": "HP:0003086", - "display": "Acromesomelia" - }, - { - "code": "HP:0003416", - "display": "Spinal canal stenosis" - }, - { - "code": "HP:0002815", - "display": "Abnormality of the knee" - }, - { - "code": "HP:0002992", - "display": "Abnormality of tibia morphology" - }, - { - "code": "HP:0001639", - "display": "Hypertrophic cardiomyopathy" - }, - { - "code": "HP:0003236", - "display": "Elevated serum creatine kinase" - }, - { - "code": "HP:0001369", - "display": "Arthritis" - }, - { - "code": "HP:0003560", - "display": "Muscular dystrophy" - }, - { - "code": "HP:0003974", - "display": "Absent radius" - }, - { - "code": "HP:0002818", - "display": "Abnormality of the radius" - }, - { - "code": "HP:0001561", - "display": "Polyhydramnios" - }, - { - "code": "HP:0002299", - "display": "Brittle hair" - }, - { - "code": "HP:0002208", - "display": "Coarse hair" - }, - { - "code": "HP:0002213", - "display": "Fine hair" - }, - { - "code": "HP:0000522", - "display": "Alacrima" - }, - { - "code": "HP:0100704", - "display": "Cerebral visual impairment" - }, - { - "code": "HP:0012713", - "display": "Moderate hearing impairment" - }, - { - "code": "HP:0002307", - "display": "Drooling" - }, - { - "code": "HP:0002714", - "display": "Downturned corners of mouth" - }, - { - "code": "HP:0000191", - "display": "Accessory oral frenulum" - }, - { - "code": "HP:0000158", - "display": "Macroglossia" - }, - { - "code": "HP:0012020", - "display": "Right aortic arch" - }, - { - "code": "HP:0002104", - "display": "Apnea" - }, - { - "code": "HP:0000598", - "display": "Abnormality of the ear" - }, - { - "code": "HP:0007874", - "display": "Almond-shaped palpebral fissure" - }, - { - "code": "HP:0010804", - "display": "Tented upper lip vermilion" - }, - { - "code": "HP:0000885", - "display": "Broad ribs" - }, - { - "code": "HP:0000768", - "display": "Pectus carinatum" - }, - { - "code": "HP:0001680", - "display": "Coarctation of aorta" - }, - { - "code": "HP:0000687", - "display": "Widely spaced teeth" - }, - { - "code": "HP:0000047", - "display": "Hypospadias" - }, - { - "code": "HP:0001943", - "display": "Hypoglycemia" - }, - { - "code": "HP:0012369", - "display": "Abnormality of malar bones" - }, - { - "code": "HP:0009900", - "display": "Unilateral deafness" - }, - { - "code": "HP:0000023", - "display": "Inguinal hernia" - }, - { - "code": "HP:0000074", - "display": "Ureteropelvic junction obstruction" - }, - { - "code": "HP:0001800", - "display": "Hypoplastic toenails" - }, - { - "code": "HP:0001804", - "display": "Hypoplastic fingernail" - }, - { - "code": "HP:0002949", - "display": "Fused cervical vertebrae" - }, - { - "code": "HP:0008050", - "display": "Abnormality of the palpebral fissures" - }, - { - "code": "HP:0008577", - "display": "Underfolded helix" - }, - { - "code": "HP:0008589", - "display": "Hypoplastic helices" - }, - { - "code": "HP:0010863", - "display": "Receptive language delay" - }, - { - "code": "HP:0002282", - "display": "Gray matter heterotopia" - }, - { - "code": "HP:0002085", - "display": "Occipital encephalocele" - }, - { - "code": "HP:0001057", - "display": "Aplasia cutis congenita" - }, - { - "code": "HP:0000211", - "display": "Trismus" - }, - { - "code": "HP:0008422", - "display": "Vertebral wedging" - }, - { - "code": "HP:0003170", - "display": "Abnormality of the acetabulum" - }, - { - "code": "HP:0003272", - "display": "Abnormality of the hip bone" - }, - { - "code": "HP:0003028", - "display": "Abnormality of the ankles" - }, - { - "code": "HP:0003301", - "display": "Irregular vertebral endplates" - }, - { - "code": "HP:0010508", - "display": "Metatarsus valgus" - }, - { - "code": "HP:0009811", - "display": "Abnormality of the elbow" - }, - { - "code": "HP:0000736", - "display": "Short attention span" - }, - { - "code": "HP:0002912", - "display": "Methylmalonic acidemia" - }, - { - "code": "HP:0001941", - "display": "Acidosis" - }, - { - "code": "HP:0001992", - "display": "Organic aciduria" - }, - { - "code": "HP:0009027", - "display": "Foot dorsiflexor weakness" - }, - { - "code": "HP:0002063", - "display": "Rigidity" - }, - { - "code": "HP:0000384", - "display": "Preauricular skin tag" - }, - { - "code": "HP:0200046", - "display": "Cat cry" - }, - { - "code": "HP:0001357", - "display": "Plagiocephaly" - }, - { - "code": "HP:0000670", - "display": "Carious teeth" - }, - { - "code": "HP:0011090", - "display": "Fused teeth" - }, - { - "code": "HP:0012810", - "display": "Wide nasal base" - }, - { - "code": "HP:0010296", - "display": "Ankyloglossia" - }, - { - "code": "HP:0001636", - "display": "Tetralogy of Fallot" - }, - { - "code": "HP:0001305", - "display": "Dandy-Walker malformation" - }, - { - "code": "HP:0000238", - "display": "Hydrocephalus" - }, - { - "code": "HP:0005469", - "display": "Flat occiput" - }, - { - "code": "HP:0000270", - "display": "Delayed cranial suture closure" - }, - { - "code": "HP:0000239", - "display": "Large fontanelles" - }, - { - "code": "HP:0010537", - "display": "Wide cranial sutures" - }, - { - "code": "HP:0002217", - "display": "Slow-growing hair" - }, - { - "code": "HP:0000587", - "display": "Abnormality of the optic nerve" - }, - { - "code": "HP:0005989", - "display": "Redundant neck skin" - }, - { - "code": "HP:0010775", - "display": "Vascular ring" - }, - { - "code": "HP:0002779", - "display": "Tracheomalacia" - }, - { - "code": "HP:0002827", - "display": "Hip dislocation" - }, - { - "code": "HP:0001302", - "display": "Pachygyria" - }, - { - "code": "HP:0007362", - "display": "Aplasia/Hypoplasia of the brainstem" - }, - { - "code": "HP:0001558", - "display": "Decreased fetal movement" - }, - { - "code": "HP:0010878", - "display": "Fetal cystic hygroma" - }, - { - "code": "HP:0011398", - "display": "Central hypotonia" - }, - { - "code": "HP:0002071", - "display": "Abnormality of extrapyramidal motor function" - }, - { - "code": "HP:0000826", - "display": "Precocious puberty" - }, - { - "code": "HP:0000014", - "display": "Abnormality of the bladder" - }, - { - "code": "HP:0005037", - "display": "Proximal radio-ulnar synostosis" - }, - { - "code": "HP:0100543", - "display": "Cognitive impairment" - }, - { - "code": "HP:0000481", - "display": "Abnormal cornea morphology" - }, - { - "code": "HP:0000076", - "display": "Vesicoureteral reflux" - }, - { - "code": "HP:0000297", - "display": "Facial hypotonia" - }, - { - "code": "HP:0000391", - "display": "Thickened helices" - }, - { - "code": "HP:0001162", - "display": "Postaxial hand polydactyly" - }, - { - "code": "HP:0001385", - "display": "Hip dysplasia" - }, - { - "code": "HP:0002342", - "display": "Intellectual disability, moderate" - }, - { - "code": "HP:0003191", - "display": "Cleft ala nasi" - }, - { - "code": "HP:0009765", - "display": "Low hanging columella" - }, - { - "code": "HP:0010297", - "display": "Bifid tongue" - }, - { - "code": "HP:0011330", - "display": "Metopic synostosis" - }, - { - "code": "HP:0012804", - "display": "Corneal ulceration" - }, - { - "code": "HP:0010485", - "display": "Hyperextensibility at elbow" - }, - { - "code": "HP:0000609", - "display": "Optic nerve hypoplasia" - }, - { - "code": "HP:0001176", - "display": "Large hands" - }, - { - "code": "HP:0004233", - "display": "Advanced ossification of carpal bones" - }, - { - "code": "HP:0100842", - "display": "Septo-optic dysplasia" - }, - { - "code": "HP:0002034", - "display": "Abnormality of the rectum" - }, - { - "code": "HP:0002283", - "display": "Global brain atrophy" - }, - { - "code": "HP:0003115", - "display": "Abnormal EKG" - }, - { - "code": "HP:0002577", - "display": "Abnormal stomach morphology" - }, - { - "code": "HP:0002539", - "display": "Cortical dysplasia" - }, - { - "code": "HP:0006818", - "display": "4-layered lissencephaly" - }, - { - "code": "HP:0000593", - "display": "Abnormal anterior chamber morphology" - }, - { - "code": "HP:0000179", - "display": "Thick lower lip vermilion" - }, - { - "code": "HP:0002002", - "display": "Deep philtrum" - }, - { - "code": "HP:0009931", - "display": "Enlarged naris" - }, - { - "code": "HP:0002948", - "display": "Vertebral fusion" - }, - { - "code": "HP:0002937", - "display": "Hemivertebrae" - }, - { - "code": "HP:0002308", - "display": "Arnold-Chiari malformation" - }, - { - "code": "HP:0011320", - "display": "Unilambdoid synostosis" - }, - { - "code": "HP:0002781", - "display": "Upper airway obstruction" - }, - { - "code": "HP:0001363", - "display": "Craniosynostosis" - }, - { - "code": "HP:0000204", - "display": "Cleft upper lip" - }, - { - "code": "HP:0001738", - "display": "Exocrine pancreatic insufficiency" - }, - { - "code": "HP:0002823", - "display": "Abnormality of femur morphology" - }, - { - "code": "HP:0000823", - "display": "Delayed puberty" - }, - { - "code": "HP:0100279", - "display": "Ulcerative colitis" - }, - { - "code": "HP:0003834", - "display": "Shoulder dislocation" - }, - { - "code": "HP:0001065", - "display": "Striae distensae" - }, - { - "code": "HP:0000448", - "display": "Prominent nose" - }, - { - "code": "HP:0000554", - "display": "Uveitis" - }, - { - "code": "HP:0001006", - "display": "obsolete Hypotrichosis" - }, - { - "code": "HP:0000501", - "display": "Glaucoma" - }, - { - "code": "HP:0000262", - "display": "Turricephaly" - }, - { - "code": "HP:0000729", - "display": "Autistic behavior" - }, - { - "code": "HP:0010800", - "display": "Absent cupid's bow" - }, - { - "code": "HP:0010808", - "display": "Protruding tongue" - }, - { - "code": "HP:0009927", - "display": "Aplasia of the nose" - }, - { - "code": "HP:0100539", - "display": "Periorbital edema" - }, - { - "code": "HP:0000629", - "display": "Periorbital fullness" - }, - { - "code": "HP:0000178", - "display": "Abnormality of lower lip" - }, - { - "code": "HP:0000168", - "display": "Abnormality of the gingiva" - }, - { - "code": "HP:0001022", - "display": "Albinism" - }, - { - "code": "HP:0000177", - "display": "Abnormality of upper lip" - }, - { - "code": "HP:0001337", - "display": "Tremor" - }, - { - "code": "HP:0002135", - "display": "Basal ganglia calcification" - }, - { - "code": "HP:0002352", - "display": "Leukoencephalopathy" - }, - { - "code": "HP:0002514", - "display": "Cerebral calcification" - }, - { - "code": "HP:0010576", - "display": "Intracranial cystic lesion" - }, - { - "code": "HP:0001622", - "display": "Premature birth" - }, - { - "code": "HP:0002415", - "display": "Leukodystrophy" - }, - { - "code": "HP:0001320", - "display": "Cerebellar vermis hypoplasia" - }, - { - "code": "HP:0001773", - "display": "Short foot" - }, - { - "code": "HP:0002750", - "display": "Delayed skeletal maturation" - }, - { - "code": "HP:0004415", - "display": "Pulmonary artery stenosis" - }, - { - "code": "HP:0012741", - "display": "Unilateral cryptorchidism" - }, - { - "code": "HP:0000036", - "display": "Abnormality of the penis" - }, - { - "code": "HP:0002408", - "display": "Cerebral arteriovenous malformation" - }, - { - "code": "HP:0007457", - "display": "Prominent veins on trunk" - }, - { - "code": "HP:0000378", - "display": "Cupped ear" - }, - { - "code": "HP:0000396", - "display": "Overfolded helix" - }, - { - "code": "HP:0000035", - "display": "Abnormal testis morphology" - }, - { - "code": "HP:0009895", - "display": "Abnormality of the crus of the helix" - }, - { - "code": "HP:0000034", - "display": "Hydrocele testis" - }, - { - "code": "HP:0000722", - "display": "Obsessive-compulsive behavior" - }, - { - "code": "HP:0000845", - "display": "Growth hormone excess" - }, - { - "code": "HP:0100829", - "display": "Galactorrhea" - }, - { - "code": "HP:0001578", - "display": "Increased circulating cortisol level" - }, - { - "code": "HP:0000786", - "display": "Primary amenorrhea" - }, - { - "code": "HP:0001701", - "display": "Pericarditis" - }, - { - "code": "HP:0002076", - "display": "Migraine" - }, - { - "code": "HP:0004755", - "display": "Supraventricular tachycardia" - }, - { - "code": "HP:0010522", - "display": "Dyslexia" - }, - { - "code": "HP:0004313", - "display": "Decreased circulating antibody level" - }, - { - "code": "HP:0000011", - "display": "Neurogenic bladder" - }, - { - "code": "HP:0000641", - "display": "Dysmetric saccades" - }, - { - "code": "HP:0007772", - "display": "Impaired smooth pursuit" - }, - { - "code": "HP:0001583", - "display": "Rotary nystagmus" - }, - { - "code": "HP:0010544", - "display": "Vertical nystagmus" - }, - { - "code": "HP:0012735", - "display": "Cough" - }, - { - "code": "HP:0002075", - "display": "Dysdiadochokinesis" - }, - { - "code": "HP:0007256", - "display": "Abnormal pyramidal sign" - }, - { - "code": "HP:0001257", - "display": "Spasticity" - }, - { - "code": "HP:0002321", - "display": "Vertigo" - }, - { - "code": "HP:0002384", - "display": "Focal impaired awareness seizure" - }, - { - "code": "HP:0011376", - "display": "Morphological abnormality of the vestibule of the inner ear" - }, - { - "code": "HP:0002326", - "display": "Transient ischemic attack" - }, - { - "code": "HP:0005584", - "display": "Renal cell carcinoma" - }, - { - "code": "HP:0003124", - "display": "Hypercholesterolemia" - }, - { - "code": "HP:0003002", - "display": "Breast carcinoma" - }, - { - "code": "HP:0004953", - "display": "obsolete Dilatation of abdominal aorta" - }, - { - "code": "HP:0004944", - "display": "Dilatation of the cerebral artery" - }, - { - "code": "HP:0000100", - "display": "Nephrotic syndrome" - }, - { - "code": "HP:0002783", - "display": "Recurrent lower respiratory tract infections" - }, - { - "code": "HP:0003470", - "display": "Paralysis" - }, - { - "code": "HP:0006597", - "display": "Diaphragmatic paralysis" - }, - { - "code": "HP:0008151", - "display": "Prolonged prothrombin time" - }, - { - "code": "HP:0010628", - "display": "Facial palsy" - }, - { - "code": "HP:0011892", - "display": "Low levels of vitamin K" - }, - { - "code": "HP:0001075", - "display": "Atrophic scars" - }, - { - "code": "HP:0001816", - "display": "Thin nail" - }, - { - "code": "HP:0002216", - "display": "Premature graying of hair" - }, - { - "code": "HP:0003401", - "display": "Paresthesia" - }, - { - "code": "HP:0100134", - "display": "Abnormality of the axillary hair" - }, - { - "code": "HP:0100797", - "display": "Toenail dysplasia" - }, - { - "code": "HP:0010461", - "display": "Abnormality of the male genitalia" - }, - { - "code": "HP:0000044", - "display": "Hypogonadotropic hypogonadism" - }, - { - "code": "HP:0100568", - "display": "Neoplasm of the endocrine system" - }, - { - "code": "HP:0001646", - "display": "Abnormal aortic valve morphology" - }, - { - "code": "HP:0000813", - "display": "Bicornuate uterus" - }, - { - "code": "HP:0004380", - "display": "Aortic valve calcification" - }, - { - "code": "HP:0001650", - "display": "Aortic valve stenosis" - }, - { - "code": "HP:0000073", - "display": "Ureteral duplication" - }, - { - "code": "HP:0100651", - "display": "Type I diabetes mellitus" - }, - { - "code": "HP:0000819", - "display": "Diabetes mellitus" - }, - { - "code": "HP:0000573", - "display": "Retinal hemorrhage" - }, - { - "code": "HP:0005264", - "display": "Abnormality of the gallbladder" - }, - { - "code": "HP:0000475", - "display": "Broad neck" - }, - { - "code": "HP:0000089", - "display": "Renal hypoplasia" - }, - { - "code": "HP:0000921", - "display": "Missing ribs" - }, - { - "code": "HP:0001789", - "display": "Hydrops fetalis" - }, - { - "code": "HP:0002089", - "display": "Pulmonary hypoplasia" - }, - { - "code": "HP:0003422", - "display": "Vertebral segmentation defect" - }, - { - "code": "HP:0002323", - "display": "Anencephaly" - }, - { - "code": "HP:0000341", - "display": "Narrow forehead" - }, - { - "code": "HP:0002869", - "display": "Flared iliac wings" - }, - { - "code": "HP:0003100", - "display": "Slender long bone" - }, - { - "code": "HP:0003275", - "display": "Narrow pelvis bone" - }, - { - "code": "HP:0009891", - "display": "Underdeveloped supraorbital ridges" - }, - { - "code": "HP:0011039", - "display": "Abnormality of the helix" - }, - { - "code": "HP:0008572", - "display": "External ear malformation" - }, - { - "code": "HP:0009738", - "display": "Abnormality of the antihelix" - }, - { - "code": "HP:0011328", - "display": "Abnormality of fontanelles" - }, - { - "code": "HP:0012155", - "display": "Decreased corneal sensation" - }, - { - "code": "HP:0004602", - "display": "Cervical C2/C3 vertebral fusion" - }, - { - "code": "HP:0002997", - "display": "Abnormality of the ulna" - }, - { - "code": "HP:0009777", - "display": "Absent thumb" - }, - { - "code": "HP:0002893", - "display": "Pituitary adenoma" - }, - { - "code": "HP:0040278", - "display": "Prolactinoma" - }, - { - "code": "HP:0001555", - "display": "Asymmetry of the thorax" - }, - { - "code": "HP:0000902", - "display": "Rib fusion" - }, - { - "code": "HP:0002164", - "display": "Nail dysplasia" - }, - { - "code": "HP:0011314", - "display": "Abnormality of long bone morphology" - }, - { - "code": "HP:0002867", - "display": "Abnormality of the ilium" - }, - { - "code": "HP:0000774", - "display": "Narrow chest" - }, - { - "code": "HP:0006482", - "display": "Abnormality of dental morphology" - }, - { - "code": "HP:0004383", - "display": "Hypoplastic left heart" - }, - { - "code": "HP:0002015", - "display": "Dysphagia" - }, - { - "code": "HP:0500093", - "display": "Food allergy" - }, - { - "code": "HP:0001519", - "display": "Disproportionate tall stature" - }, - { - "code": "HP:0003179", - "display": "Protrusio acetabuli" - }, - { - "code": "HP:0007385", - "display": "Aplasia cutis congenita of scalp" - }, - { - "code": "HP:0000716", - "display": "Depressivity" - }, - { - "code": "HP:0012583", - "display": "Unilateral renal hypoplasia" - }, - { - "code": "HP:0000618", - "display": "Blindness" - }, - { - "code": "HP:0001004", - "display": "Lymphedema" - }, - { - "code": "HP:0002652", - "display": "Skeletal dysplasia" - }, - { - "code": "HP:0012520", - "display": "Perivascular spaces" - }, - { - "code": "HP:0005293", - "display": "Venous insufficiency" - }, - { - "code": "HP:0012432", - "display": "Chronic fatigue" - }, - { - "code": "HP:0002578", - "display": "Gastroparesis" - }, - { - "code": "HP:0001658", - "display": "Myocardial infarction" - }, - { - "code": "HP:0001802", - "display": "Absent toenail" - }, - { - "code": "HP:0001821", - "display": "Broad nail" - }, - { - "code": "HP:0000807", - "display": "Glandular hypospadias" - }, - { - "code": "HP:0100582", - "display": "Nasal polyposis" - }, - { - "code": "HP:0002653", - "display": "Bone pain" - }, - { - "code": "HP:0001073", - "display": "Cigarette-paper scars" - }, - { - "code": "HP:0031913", - "display": "Rhombencephalosynapsis" - }, - { - "code": "HP:0002617", - "display": "Dilatation" - }, - { - "code": "HP:0005107", - "display": "Abnormal sacrum morphology" - }, - { - "code": "HP:0002025", - "display": "Anal stenosis" - }, - { - "code": "HP:0009099", - "display": "Median cleft palate" - }, - { - "code": "HP:0003212", - "display": "Increased circulating IgE level" - }, - { - "code": "HP:0001319", - "display": "Neonatal hypotonia" - }, - { - "code": "HP:0002659", - "display": "Increased susceptibility to fractures" - }, - { - "code": "HP:0025246", - "display": "Trichilemmal cyst" - }, - { - "code": "HP:0002107", - "display": "Pneumothorax" - }, - { - "code": "HP:0000107", - "display": "Renal cyst" - }, - { - "code": "HP:0001025", - "display": "Urticaria" - }, - { - "code": "HP:0002204", - "display": "Pulmonary embolism" - }, - { - "code": "HP:0001058", - "display": "Poor wound healing" - }, - { - "code": "HP:0003010", - "display": "Prolonged bleeding time" - }, - { - "code": "HP:0100502", - "display": "Vitamin B12 deficiency" - }, - { - "code": "HP:0100510", - "display": "Low levels of vitamin C" - }, - { - "code": "HP:0030976", - "display": "Abnormal factor VIII activity" - }, - { - "code": "HP:0100789", - "display": "Torus palatinus" - }, - { - "code": "HP:0000108", - "display": "Renal corticomedullary cysts" - }, - { - "code": "HP:0000072", - "display": "Hydroureter" - }, - { - "code": "HP:0000019", - "display": "Urinary hesitancy" - }, - { - "code": "HP:0100771", - "display": "Hypoperistalsis" - }, - { - "code": "HP:0000021", - "display": "Megacystis" - }, - { - "code": "HP:0004388", - "display": "Microcolon" - }, - { - "code": "HP:0005247", - "display": "Hypoplasia of the abdominal wall musculature" - }, - { - "code": "HP:0004794", - "display": "Malrotation of small bowel" - }, - { - "code": "HP:0000045", - "display": "Abnormality of the scrotum" - }, - { - "code": "HP:0002236", - "display": "Frontal upsweep of hair" - }, - { - "code": "HP:0000212", - "display": "Gingival overgrowth" - }, - { - "code": "HP:0001808", - "display": "Fragile nails" - }, - { - "code": "HP:0000225", - "display": "Gingival bleeding" - }, - { - "code": "HP:0006009", - "display": "Broad phalanx" - }, - { - "code": "HP:0001837", - "display": "Broad toe" - }, - { - "code": "HP:0001946", - "display": "Ketosis" - }, - { - "code": "HP:0002490", - "display": "Increased CSF lactate" - }, - { - "code": "HP:0002922", - "display": "Increased CSF protein" - }, - { - "code": "HP:0003128", - "display": "Lactic acidosis" - }, - { - "code": "HP:0003111", - "display": "Abnormal blood ion concentration" - }, - { - "code": "HP:0032234", - "display": "Increased circulating creatine kinase MM isoform" - }, - { - "code": "HP:0003348", - "display": "Hyperalaninemia" - }, - { - "code": "HP:0008347", - "display": "Decreased activity of mitochondrial complex IV" - }, - { - "code": "HP:0000326", - "display": "Abnormality of the maxilla" - }, - { - "code": "HP:0010758", - "display": "Abnormality of the premaxilla" - }, - { - "code": "HP:0005681", - "display": "Juvenile rheumatoid arthritis" - }, - { - "code": "HP:0000514", - "display": "Slow saccadic eye movements" - }, - { - "code": "HP:0002788", - "display": "Recurrent upper respiratory tract infections" - }, - { - "code": "HP:0003396", - "display": "Syringomyelia" - }, - { - "code": "HP:0003011", - "display": "Abnormality of the musculature" - }, - { - "code": "HP:0002098", - "display": "Respiratory distress" - }, - { - "code": "HP:0002018", - "display": "Nausea" - }, - { - "code": "HP:0002014", - "display": "Diarrhea" - }, - { - "code": "HP:0025168", - "display": "Left ventricular diastolic dysfunction" - }, - { - "code": "HP:0001679", - "display": "Abnormal aortic morphology" - }, - { - "code": "HP:0000159", - "display": "Abnormal lip morphology" - }, - { - "code": "HP:0011338", - "display": "Abnormality of mouth shape" - }, - { - "code": "HP:0000478", - "display": "Abnormality of the eye" - }, - { - "code": "HP:0000154", - "display": "Wide mouth" - }, - { - "code": "HP:0001513", - "display": "Obesity" - }, - { - "code": "HP:0002475", - "display": "Myelomeningocele" - }, - { - "code": "HP:0003765", - "display": "Psoriasiform dermatitis" - }, - { - "code": "HP:0010289", - "display": "Cleft of alveolar ridge of maxilla" - }, - { - "code": "HP:0003908", - "display": "Corner fracture of metaphysis" - }, - { - "code": "HP:0002190", - "display": "Choroid plexus cyst" - }, - { - "code": "HP:0004370", - "display": "Abnormality of temperature regulation" - }, - { - "code": "HP:0011611", - "display": "Interrupted aortic arch" - }, - { - "code": "HP:0000737", - "display": "Irritability" - }, - { - "code": "HP:0001344", - "display": "Absent speech" - }, - { - "code": "HP:0002376", - "display": "Developmental regression" - }, - { - "code": "HP:0002140", - "display": "Ischemic stroke" - }, - { - "code": "HP:0001287", - "display": "Meningitis" - }, - { - "code": "HP:0002721", - "display": "Immunodeficiency" - }, - { - "code": "HP:0000041", - "display": "Chordee" - }, - { - "code": "HP:0012854", - "display": "Midshaft hypospadias" - }, - { - "code": "HP:0000808", - "display": "Penoscrotal hypospadias" - }, - { - "code": "HP:0000048", - "display": "Bifid scrotum" - }, - { - "code": "HP:0001047", - "display": "Atopic dermatitis" - }, - { - "code": "HP:0001621", - "display": "Weak voice" - }, - { - "code": "HP:0002372", - "display": "Normal interictal EEG" - }, - { - "code": "HP:0012803", - "display": "Anisometropia" - }, - { - "code": "HP:0011386", - "display": "Narrow internal auditory canal" - }, - { - "code": "HP:0012714", - "display": "Severe hearing impairment" - }, - { - "code": "HP:0006485", - "display": "Agenesis of incisor" - }, - { - "code": "HP:0000787", - "display": "Nephrolithiasis" - }, - { - "code": "HP:0011332", - "display": "Hemifacial hypoplasia" - }, - { - "code": "HP:0001909", - "display": "Leukemia" - }, - { - "code": "HP:0004808", - "display": "Acute myeloid leukemia" - }, - { - "code": "HP:0006495", - "display": "Aplasia/Hypoplasia of the ulna" - }, - { - "code": "HP:0001180", - "display": "Hand oligodactyly" - }, - { - "code": "HP:0002991", - "display": "Abnormality of fibula morphology" - }, - { - "code": "HP:0001849", - "display": "Foot oligodactyly" - }, - { - "code": "HP:0006507", - "display": "Aplasia/hypoplasia of the humerus" - }, - { - "code": "HP:0005613", - "display": "Aplasia/hypoplasia of the femur" - }, - { - "code": "HP:0006492", - "display": "Aplasia/Hypoplasia of the fibula" - }, - { - "code": "HP:0000098", - "display": "Tall stature" - }, - { - "code": "HP:0003311", - "display": "Hypoplasia of the odontoid process" - }, - { - "code": "HP:0005752", - "display": "Flattened moderately deformed vertebrae" - }, - { - "code": "HP:0030039", - "display": "Fused thoracic vertebrae" - }, - { - "code": "HP:0003304", - "display": "Spondylolysis" - }, - { - "code": "HP:0001659", - "display": "Aortic regurgitation" - }, - { - "code": "HP:0002984", - "display": "Hypoplasia of the radius" - }, - { - "code": "HP:0009944", - "display": "Partial duplication of thumb phalanx" - }, - { - "code": "HP:0005819", - "display": "Short middle phalanx of finger" - }, - { - "code": "HP:0002110", - "display": "Bronchiectasis" - }, - { - "code": "HP:0001677", - "display": "Coronary artery atherosclerosis" - }, - { - "code": "HP:0001737", - "display": "Pancreatic cysts" - }, - { - "code": "HP:0005113", - "display": "Aortic arch aneurysm" - }, - { - "code": "HP:0003022", - "display": "Hypoplasia of the ulna" - }, - { - "code": "HP:0002205", - "display": "Recurrent respiratory infections" - }, - { - "code": "HP:0001669", - "display": "Transposition of the great arteries" - }, - { - "code": "HP:0001716", - "display": "Wolff-Parkinson-White syndrome" - }, - { - "code": "HP:0002758", - "display": "Osteoarthritis" - }, - { - "code": "HP:0002037", - "display": "Inflammation of the large intestine" - }, - { - "code": "HP:0009892", - "display": "Anotia" - }, - { - "code": "HP:0011331", - "display": "Hemifacial atrophy" - }, - { - "code": "HP:0009118", - "display": "Aplasia/Hypoplasia of the mandible" - }, - { - "code": "HP:0009940", - "display": "Asymmetry of the mandible" - }, - { - "code": "HP:0000682", - "display": "Abnormality of dental enamel" - }, - { - "code": "HP:0009908", - "display": "Anterior creases of earlobe" - }, - { - "code": "HP:0001541", - "display": "Ascites" - }, - { - "code": "HP:0006687", - "display": "Aortic tortuosity" - }, - { - "code": "HP:0010535", - "display": "Sleep apnea" - }, - { - "code": "HP:0100633", - "display": "Esophagitis" - }, - { - "code": "HP:0002105", - "display": "Hemoptysis" - }, - { - "code": "HP:0002613", - "display": "Biliary cirrhosis" - }, - { - "code": "HP:0004469", - "display": "Chronic bronchitis" - }, - { - "code": "HP:0002720", - "display": "Decreased circulating IgA level" - }, - { - "code": "HP:0002904", - "display": "Hyperbilirubinemia" - }, - { - "code": "HP:0003237", - "display": "Increased circulating IgG level" - }, - { - "code": "HP:0003262", - "display": "Smooth muscle antibody positivity" - }, - { - "code": "HP:0011227", - "display": "Elevated C-reactive protein level" - }, - { - "code": "HP:0001852", - "display": "Sandal gap" - }, - { - "code": "HP:0004381", - "display": "Supravalvular aortic stenosis" - }, - { - "code": "HP:0100700", - "display": "Abnormal arachnoid mater morphology" - }, - { - "code": "HP:0002624", - "display": "Abnormal venous morphology" - }, - { - "code": "HP:0002289", - "display": "Alopecia universalis" - }, - { - "code": "HP:0009588", - "display": "Vestibular Schwannoma" - }, - { - "code": "HP:0001648", - "display": "Cor pulmonale" - }, - { - "code": "HP:0002091", - "display": "Restrictive ventilatory defect" - }, - { - "code": "HP:0002092", - "display": "Pulmonary arterial hypertension" - }, - { - "code": "HP:0002113", - "display": "Pulmonary infiltrates" - }, - { - "code": "HP:0003138", - "display": "Increased blood urea nitrogen" - }, - { - "code": "HP:0003259", - "display": "Elevated serum creatinine" - }, - { - "code": "HP:0005180", - "display": "Tricuspid regurgitation" - }, - { - "code": "HP:0012585", - "display": "Renal atrophy" - }, - { - "code": "HP:0005133", - "display": "Right ventricular dilatation" - }, - { - "code": "HP:0005575", - "display": "Hemolytic-uremic syndrome" - }, - { - "code": "HP:0001697", - "display": "Abnormal pericardium morphology" - }, - { - "code": "HP:0012486", - "display": "Myelitis" - }, - { - "code": "HP:0002385", - "display": "Paraparesis" - }, - { - "code": "HP:0006706", - "display": "Cystic liver disease" - }, - { - "code": "HP:0010880", - "display": "Increased nuchal translucency" - }, - { - "code": "HP:0000457", - "display": "Depressed nasal ridge" - }, - { - "code": "HP:0002263", - "display": "Exaggerated cupid's bow" - }, - { - "code": "HP:0002500", - "display": "Abnormality of the cerebral white matter" - }, - { - "code": "HP:0002835", - "display": "Aspiration" - }, - { - "code": "HP:0000600", - "display": "Abnormality of the pharynx" - }, - { - "code": "HP:0004327", - "display": "Abnormal vitreous humor morphology" - }, - { - "code": "HP:0004378", - "display": "Abnormality of the anus" - }, - { - "code": "HP:0012374", - "display": "obsolete Abnormal globe morphology" - }, - { - "code": "HP:0100768", - "display": "Choriocarcinoma" - }, - { - "code": "HP:0030991", - "display": "Sclerosing cholangitis" - }, - { - "code": "HP:0006510", - "display": "Chronic pulmonary obstruction" - }, - { - "code": "HP:0000710", - "display": "Hyperorality" - }, - { - "code": "HP:0001270", - "display": "Motor delay" - }, - { - "code": "HP:0001548", - "display": "Overgrowth" - }, - { - "code": "HP:0002311", - "display": "Incoordination" - }, - { - "code": "HP:0006288", - "display": "Advanced eruption of teeth" - }, - { - "code": "HP:0006323", - "display": "Premature loss of primary teeth" - }, - { - "code": "HP:0009890", - "display": "High anterior hairline" - }, - { - "code": "HP:0100034", - "display": "Motor tics" - }, - { - "code": "HP:0100035", - "display": "Phonic tics" - }, - { - "code": "HP:0000348", - "display": "High forehead" - }, - { - "code": "HP:0001520", - "display": "Large for gestational age" - }, - { - "code": "HP:0001239", - "display": "Wrist flexion contracture" - }, - { - "code": "HP:0007359", - "display": "Focal-onset seizure" - }, - { - "code": "HP:0000430", - "display": "Underdeveloped nasal alae" - }, - { - "code": "HP:0007400", - "display": "Irregular hyperpigmentation" - }, - { - "code": "HP:0100495", - "display": "Mastocytosis" - }, - { - "code": "HP:0012378", - "display": "Fatigue" - }, - { - "code": "HP:0002046", - "display": "Heat intolerance" - }, - { - "code": "HP:0003270", - "display": "Abdominal distention" - }, - { - "code": "HP:0002180", - "display": "Neurodegeneration" - }, - { - "code": "HP:0003493", - "display": "Antinuclear antibody positivity" - }, - { - "code": "HP:0030057", - "display": "Autoimmune antibody positivity" - }, - { - "code": "HP:0006802", - "display": "Abnormal anterior horn cell morphology" - }, - { - "code": "HP:0000064", - "display": "Hypoplastic labia minora" - }, - { - "code": "HP:0000338", - "display": "Hypomimic face" - }, - { - "code": "HP:0001642", - "display": "Pulmonic stenosis" - }, - { - "code": "HP:0011344", - "display": "Severe global developmental delay" - }, - { - "code": "HP:0200007", - "display": "Abnormal size of the palpebral fissures" - }, - { - "code": "HP:0004464", - "display": "Postauricular pit" - }, - { - "code": "HP:0000130", - "display": "Abnormality of the uterus" - }, - { - "code": "HP:0000137", - "display": "Abnormality of the ovary" - }, - { - "code": "HP:0000142", - "display": "Abnormal vagina morphology" - }, - { - "code": "HP:0000370", - "display": "Abnormality of the middle ear" - }, - { - "code": "HP:0011787", - "display": "Central hypothyroidism" - }, - { - "code": "HP:0000274", - "display": "Small face" - }, - { - "code": "HP:0000446", - "display": "Narrow nasal bridge" - }, - { - "code": "HP:0000622", - "display": "Blurred vision" - }, - { - "code": "HP:0001245", - "display": "Small thenar eminence" - }, - { - "code": "HP:0009601", - "display": "Aplasia/Hypoplasia of the thumb" - }, - { - "code": "HP:0011343", - "display": "Moderate global developmental delay" - }, - { - "code": "HP:0000419", - "display": "Abnormality of the nasal septum" - }, - { - "code": "HP:0000502", - "display": "Abnormal conjunctiva morphology" - }, - { - "code": "HP:0000591", - "display": "Abnormal sclera morphology" - }, - { - "code": "HP:0000615", - "display": "Abnormal pupil morphology" - }, - { - "code": "HP:0001163", - "display": "Abnormality of the metacarpal bones" - }, - { - "code": "HP:0001832", - "display": "Abnormal metatarsal morphology" - }, - { - "code": "HP:0001850", - "display": "Abnormality of the tarsal bones" - }, - { - "code": "HP:0010490", - "display": "Abnormality of the palmar creases" - }, - { - "code": "HP:0010881", - "display": "Abnormality of the umbilical cord" - }, - { - "code": "HP:0009113", - "display": "Diaphragmatic weakness" - }, - { - "code": "HP:0011664", - "display": "Left ventricular noncompaction cardiomyopathy" - }, - { - "code": "HP:0100240", - "display": "Synostosis of joints" - }, - { - "code": "HP:0001838", - "display": "Rocker bottom foot" - }, - { - "code": "HP:0003717", - "display": "Minimal subcutaneous fat" - }, - { - "code": "HP:0001339", - "display": "Lissencephaly" - }, - { - "code": "HP:0001591", - "display": "Bell-shaped thorax" - }, - { - "code": "HP:0002655", - "display": "Spondyloepiphyseal dysplasia" - }, - { - "code": "HP:0002983", - "display": "Micromelia" - }, - { - "code": "HP:0003016", - "display": "Metaphyseal widening" - }, - { - "code": "HP:0009826", - "display": "Limb undergrowth" - }, - { - "code": "HP:0004488", - "display": "Macrocephaly at birth" - }, - { - "code": "HP:0001695", - "display": "Cardiac arrest" - }, - { - "code": "HP:0001712", - "display": "Left ventricular hypertrophy" - }, - { - "code": "HP:0100775", - "display": "Dural ectasia" - }, - { - "code": "HP:0000846", - "display": "Adrenal insufficiency" - }, - { - "code": "HP:0002925", - "display": "Increased thyroid-stimulating hormone level" - }, - { - "code": "HP:0100646", - "display": "Thyroiditis" - }, - { - "code": "HP:0000836", - "display": "Hyperthyroidism" - }, - { - "code": "HP:0004414", - "display": "Abnormality of the pulmonary artery" - }, - { - "code": "HP:0000465", - "display": "Webbed neck" - }, - { - "code": "HP:0000723", - "display": "Restrictive behavior" - }, - { - "code": "HP:0002253", - "display": "Colonic diverticula" - }, - { - "code": "HP:0001310", - "display": "Dysmetria" - }, - { - "code": "HP:0000093", - "display": "Proteinuria" - }, - { - "code": "HP:0002907", - "display": "Microscopic hematuria" - }, - { - "code": "HP:0003073", - "display": "Hypoalbuminemia" - }, - { - "code": "HP:0004315", - "display": "Decreased circulating IgG level" - }, - { - "code": "HP:0000795", - "display": "Abnormality of the urethra" - }, - { - "code": "HP:0001015", - "display": "Prominent superficial veins" - }, - { - "code": "HP:0004691", - "display": "2-3 toe syndactyly" - }, - { - "code": "HP:0005328", - "display": "Progeroid facial appearance" - }, - { - "code": "HP:0005487", - "display": "Prominent metopic ridge" - }, - { - "code": "HP:0007552", - "display": "Abnormal subcutaneous fat tissue distribution" - }, - { - "code": "HP:0100678", - "display": "Premature skin wrinkling" - }, - { - "code": "HP:0031137", - "display": "Storage in hepatocytes" - }, - { - "code": "HP:0002521", - "display": "Hypsarrhythmia" - }, - { - "code": "HP:0005390", - "display": "Recurrent opportunistic infections" - }, - { - "code": "HP:0002716", - "display": "Lymphadenopathy" - }, - { - "code": "HP:0005379", - "display": "obsolete Severe T lymphocytopenia" - }, - { - "code": "HP:0004432", - "display": "Agammaglobulinemia" - }, - { - "code": "HP:0006695", - "display": "Atrioventricular canal defect" - }, - { - "code": "HP:0001733", - "display": "Pancreatitis" - }, - { - "code": "HP:0002350", - "display": "Cerebellar cyst" - }, - { - "code": "HP:0012110", - "display": "Hypoplasia of the pons" - }, - { - "code": "HP:0001948", - "display": "Alkalosis" - }, - { - "code": "HP:0003113", - "display": "Hypochloremia" - }, - { - "code": "HP:0003155", - "display": "Elevated alkaline phosphatase" - }, - { - "code": "HP:0003542", - "display": "Increased serum pyruvate" - }, - { - "code": "HP:0000421", - "display": "Epistaxis" - }, - { - "code": "HP:0200136", - "display": "Oral-pharyngeal dysphagia" - }, - { - "code": "HP:0000805", - "display": "Enuresis" - }, - { - "code": "HP:0005616", - "display": "Accelerated skeletal maturation" - }, - { - "code": "HP:0002459", - "display": "obsolete Dysautonomia" - }, - { - "code": "HP:0007302", - "display": "Bipolar affective disorder" - }, - { - "code": "HP:0100602", - "display": "Preeclampsia" - }, - { - "code": "HP:0100508", - "display": "Abnormality of vitamin metabolism" - }, - { - "code": "HP:0001140", - "display": "Limbal dermoid" - }, - { - "code": "HP:0000143", - "display": "Rectovaginal fistula" - }, - { - "code": "HP:0001746", - "display": "Asplenia" - }, - { - "code": "HP:0012715", - "display": "Profound hearing impairment" - }, - { - "code": "HP:0001748", - "display": "Polysplenia" - }, - { - "code": "HP:0003072", - "display": "Hypercalcemia" - }, - { - "code": "HP:0002905", - "display": "Hyperphosphatemia" - }, - { - "code": "HP:0002901", - "display": "Hypocalcemia" - }, - { - "code": "HP:0001367", - "display": "Abnormal joint morphology" - }, - { - "code": "HP:0010562", - "display": "Keloids" - }, - { - "code": "HP:0004430", - "display": "Severe combined immunodeficiency" - }, - { - "code": "HP:0000003", - "display": "Multicystic kidney dysplasia" - }, - { - "code": "HP:0010980", - "display": "Hyperlipoproteinemia" - }, - { - "code": "HP:0002155", - "display": "Hypertriglyceridemia" - }, - { - "code": "HP:0000520", - "display": "Proptosis" - }, - { - "code": "HP:0000180", - "display": "Lobulated tongue" - }, - { - "code": "HP:0005486", - "display": "Small fontanelle" - }, - { - "code": "HP:0000891", - "display": "Cervical ribs" - }, - { - "code": "HP:0002557", - "display": "Hypoplastic nipples" - }, - { - "code": "HP:0009112", - "display": "Aplasia of the left hemidiaphragm" - }, - { - "code": "HP:0001719", - "display": "Double outlet right ventricle" - }, - { - "code": "HP:0001682", - "display": "Subvalvular aortic stenosis" - }, - { - "code": "HP:0001667", - "display": "Right ventricular hypertrophy" - }, - { - "code": "HP:0002101", - "display": "Abnormal lung lobation" - }, - { - "code": "HP:0002202", - "display": "Pleural effusion" - }, - { - "code": "HP:0002566", - "display": "Intestinal malrotation" - }, - { - "code": "HP:0004510", - "display": "Pancreatic islet-cell hyperplasia" - }, - { - "code": "HP:0001747", - "display": "Accessory spleen" - }, - { - "code": "HP:0002181", - "display": "Cerebral edema" - }, - { - "code": "HP:0000967", - "display": "Petechiae" - }, - { - "code": "HP:0009702", - "display": "Carpal synostosis" - }, - { - "code": "HP:0000927", - "display": "Abnormality of skeletal maturation" - }, - { - "code": "HP:0004348", - "display": "Abnormality of bone mineral density" - }, - { - "code": "HP:0003019", - "display": "Abnormality of the wrist" - }, - { - "code": "HP:0003063", - "display": "Abnormality of the humerus" - }, - { - "code": "HP:0001059", - "display": "Pterygium" - }, - { - "code": "HP:0001528", - "display": "Hemihypertrophy" - }, - { - "code": "HP:0011228", - "display": "Horizontal eyebrow" - }, - { - "code": "HP:0000766", - "display": "Abnormality of the sternum" - }, - { - "code": "HP:0001254", - "display": "Lethargy" - }, - { - "code": "HP:0002360", - "display": "Sleep disturbance" - }, - { - "code": "HP:0001063", - "display": "Acrocyanosis" - }, - { - "code": "HP:0001769", - "display": "Broad foot" - }, - { - "code": "HP:0010280", - "display": "Stomatitis" - }, - { - "code": "HP:0001288", - "display": "Gait disturbance" - }, - { - "code": "HP:0008330", - "display": "Reduced von Willebrand factor activity" - }, - { - "code": "HP:0001954", - "display": "Recurrent fever" - }, - { - "code": "HP:0004311", - "display": "Abnormal macrophage morphology" - }, - { - "code": "HP:0012539", - "display": "Non-Hodgkin lymphoma" - }, - { - "code": "HP:0002074", - "display": "Increased neuronal autofluorescent lipopigment" - }, - { - "code": "HP:0002973", - "display": "Abnormality of the forearm" - }, - { - "code": "HP:0003203", - "display": "Impaired oxidative burst" - }, - { - "code": "HP:0003027", - "display": "Mesomelia" - }, - { - "code": "HP:0002754", - "display": "Osteomyelitis" - }, - { - "code": "HP:0004431", - "display": "Complement deficiency" - }, - { - "code": "HP:0001258", - "display": "Spastic paraplegia" - }, - { - "code": "HP:0012811", - "display": "Wide nasal ridge" - }, - { - "code": "HP:0011832", - "display": "Narrow nasal tip" - }, - { - "code": "HP:0000288", - "display": "Abnormality of the philtrum" - }, - { - "code": "HP:0002357", - "display": "Dysphasia" - }, - { - "code": "HP:0000871", - "display": "Panhypopituitarism" - }, - { - "code": "HP:0000233", - "display": "Thin vermilion border" - }, - { - "code": "HP:0003281", - "display": "Increased serum ferritin" - }, - { - "code": "HP:0010752", - "display": "Cleft mandible" - }, - { - "code": "HP:0000437", - "display": "Depressed nasal tip" - }, - { - "code": "HP:0000453", - "display": "Choanal atresia" - }, - { - "code": "HP:0000863", - "display": "Central diabetes insipidus" - }, - { - "code": "HP:0000058", - "display": "Abnormality of the labia" - }, - { - "code": "HP:0007418", - "display": "Alopecia totalis" - }, - { - "code": "HP:0100765", - "display": "Abnormality of the tonsils" - }, - { - "code": "HP:0100747", - "display": "Macrodactyly of toe" - }, - { - "code": "HP:0002109", - "display": "obsolete Abnormality of the bronchi" - }, - { - "code": "HP:0011950", - "display": "Bronchiolitis" - }, - { - "code": "HP:0002850", - "display": "Decreased circulating total IgM" - }, - { - "code": "HP:0001395", - "display": "Hepatic fibrosis" - }, - { - "code": "HP:0010701", - "display": "Abnormal immunoglobulin level" - }, - { - "code": "HP:0009928", - "display": "Thick nasal alae" - }, - { - "code": "HP:0010807", - "display": "Open bite" - }, - { - "code": "HP:0002126", - "display": "Polymicrogyria" - }, - { - "code": "HP:0002900", - "display": "Hypokalemia" - }, - { - "code": "HP:0000155", - "display": "Oral ulcer" - }, - { - "code": "HP:0000135", - "display": "Hypogonadism" - }, - { - "code": "HP:0100783", - "display": "Breast aplasia" - }, - { - "code": "HP:0000336", - "display": "Prominent supraorbital ridges" - }, - { - "code": "HP:0010557", - "display": "Overlapping fingers" - }, - { - "code": "HP:0005100", - "display": "Premature birth following premature rupture of fetal membranes" - }, - { - "code": "HP:0002594", - "display": "Pancreatic hypoplasia" - }, - { - "code": "HP:0010109", - "display": "Short hallux" - }, - { - "code": "HP:0002334", - "display": "Abnormality of the cerebellar vermis" - }, - { - "code": "HP:0003326", - "display": "Myalgia" - }, - { - "code": "HP:0001645", - "display": "Sudden cardiac death" - }, - { - "code": "HP:0001612", - "display": "Weak cry" - }, - { - "code": "HP:0001618", - "display": "Dysphonia" - }, - { - "code": "HP:0001336", - "display": "Myoclonus" - }, - { - "code": "HP:0001283", - "display": "Bulbar palsy" - }, - { - "code": "HP:0002080", - "display": "Intention tremor" - }, - { - "code": "HP:0002174", - "display": "Postural tremor" - }, - { - "code": "HP:0002064", - "display": "Spastic gait" - }, - { - "code": "HP:0009800", - "display": "Maternal diabetes" - }, - { - "code": "HP:0001662", - "display": "Bradycardia" - }, - { - "code": "HP:0006595", - "display": "Scapulohumeral synostosis" - }, - { - "code": "HP:0005815", - "display": "Supernumerary ribs" - }, - { - "code": "HP:0000307", - "display": "Pointed chin" - }, - { - "code": "HP:0012371", - "display": "Hyperplasia of midface" - }, - { - "code": "HP:0002643", - "display": "Neonatal respiratory distress" - }, - { - "code": "HP:0002093", - "display": "Respiratory insufficiency" - }, - { - "code": "HP:0010310", - "display": "Chylothorax" - }, - { - "code": "HP:0006376", - "display": "Limited elbow flexion" - }, - { - "code": "HP:0006467", - "display": "Limited shoulder movement" - }, - { - "code": "HP:0010505", - "display": "Limitation of movement at ankles" - }, - { - "code": "HP:0010501", - "display": "Limitation of knee mobility" - }, - { - "code": "HP:0009896", - "display": "Abnormality of the antitragus" - }, - { - "code": "HP:0004404", - "display": "Abnormal nipple morphology" - }, - { - "code": "HP:0011957", - "display": "Abnormal pectoral muscle morphology" - }, - { - "code": "HP:0000777", - "display": "Abnormality of the thymus" - }, - { - "code": "HP:0000418", - "display": "Narrow nasal ridge" - }, - { - "code": "HP:0001572", - "display": "Macrodontia" - }, - { - "code": "HP:0002967", - "display": "Cubitus valgus" - }, - { - "code": "HP:0000988", - "display": "Skin rash" - }, - { - "code": "HP:0009733", - "display": "Glioma" - }, - { - "code": "HP:0012452", - "display": "Restless legs" - }, - { - "code": "HP:0100031", - "display": "Neoplasm of the thyroid gland" - }, - { - "code": "HP:0030127", - "display": "Endometriosis" - }, - { - "code": "HP:0000123", - "display": "Nephritis" - }, - { - "code": "HP:0001974", - "display": "Leukocytosis" - }, - { - "code": "HP:0010976", - "display": "B lymphocytopenia" - }, - { - "code": "HP:0000010", - "display": "Recurrent urinary tract infections" - }, - { - "code": "HP:0100807", - "display": "Long fingers" - }, - { - "code": "HP:0000653", - "display": "Sparse eyelashes" - }, - { - "code": "HP:0000171", - "display": "Microglossia" - }, - { - "code": "HP:0002575", - "display": "Tracheoesophageal fistula" - }, - { - "code": "HP:0009933", - "display": "Narrow naris" - }, - { - "code": "HP:0000883", - "display": "Thin ribs" - }, - { - "code": "HP:0000121", - "display": "Nephrocalcinosis" - }, - { - "code": "HP:0001349", - "display": "Facial diplegia" - }, - { - "code": "HP:0012037", - "display": "Pectoralis amyotrophy" - }, - { - "code": "HP:0100560", - "display": "Upper limb asymmetry" - }, - { - "code": "HP:0005684", - "display": "Distal arthrogryposis" - }, - { - "code": "HP:0010722", - "display": "Asymmetry of the ears" - }, - { - "code": "HP:0009380", - "display": "Aplasia of the fingers" - }, - { - "code": "HP:0001657", - "display": "Prolonged QT interval" - }, - { - "code": "HP:0002040", - "display": "Esophageal varix" - }, - { - "code": "HP:0000613", - "display": "Photophobia" - }, - { - "code": "HP:0000561", - "display": "Absent eyelashes" - }, - { - "code": "HP:0002223", - "display": "Absent eyebrow" - }, - { - "code": "HP:0002591", - "display": "Polyphagia" - }, - { - "code": "HP:0002373", - "display": "Febrile seizure (within the age range of 3 months to 6 years)" - }, - { - "code": "HP:0002419", - "display": "Molar tooth sign on MRI" - }, - { - "code": "HP:0001010", - "display": "Hypopigmentation of the skin" - }, - { - "code": "HP:0005772", - "display": "Aplasia/Hypoplasia of the tibia" - }, - { - "code": "HP:0002211", - "display": "White forelock" - }, - { - "code": "HP:0007126", - "display": "Proximal amyotrophy" - }, - { - "code": "HP:0003798", - "display": "Nemaline bodies" - }, - { - "code": "HP:0006533", - "display": "Bronchodysplasia" - }, - { - "code": "HP:0003391", - "display": "Gowers sign" - }, - { - "code": "HP:0000771", - "display": "Gynecomastia" - }, - { - "code": "HP:0100785", - "display": "Insomnia" - }, - { - "code": "HP:0010529", - "display": "Echolalia" - }, - { - "code": "HP:0000363", - "display": "Abnormality of earlobe" - }, - { - "code": "HP:0002612", - "display": "Congenital hepatic fibrosis" - }, - { - "code": "HP:0006721", - "display": "Acute lymphoblastic leukemia" - }, - { - "code": "HP:0001958", - "display": "Nonketotic hypoglycemia" - }, - { - "code": "HP:0003457", - "display": "EMG abnormality" - }, - { - "code": "HP:0010636", - "display": "Schizencephaly" - }, - { - "code": "HP:0005266", - "display": "Intestinal polyp" - }, - { - "code": "HP:0200063", - "display": "Colorectal polyposis" - }, - { - "code": "HP:0001762", - "display": "Talipes equinovarus" - }, - { - "code": "HP:0000056", - "display": "Abnormality of the clitoris" - }, - { - "code": "HP:0008655", - "display": "Aplasia/Hypoplasia of the fallopian tube" - }, - { - "code": "HP:0002072", - "display": "Chorea" - }, - { - "code": "HP:0008734", - "display": "Decreased testicular size" - }, - { - "code": "HP:0002136", - "display": "Broad-based gait" - }, - { - "code": "HP:0010958", - "display": "Bilateral renal agenesis" - }, - { - "code": "HP:0002510", - "display": "Spastic tetraplegia" - }, - { - "code": "HP:0003234", - "display": "Decreased plasma carnitine" - }, - { - "code": "HP:0000720", - "display": "Mood swings" - }, - { - "code": "HP:0012638", - "display": "Abnormal nervous system physiology" - }, - { - "code": "HP:0002803", - "display": "Congenital contracture" - }, - { - "code": "HP:0000152", - "display": "Abnormality of head or neck" - }, - { - "code": "HP:0004377", - "display": "Hematological neoplasm" - }, - { - "code": "HP:0100006", - "display": "Neoplasm of the central nervous system" - }, - { - "code": "HP:0012759", - "display": "Neurodevelopmental abnormality" - }, - { - "code": "HP:0011805", - "display": "Abnormal skeletal muscle morphology" - }, - { - "code": "HP:0003634", - "display": "Amyoplasia" - }, - { - "code": "HP:0001507", - "display": "Growth abnormality" - }, - { - "code": "HP:0001939", - "display": "Abnormality of metabolism/homeostasis" - }, - { - "code": "HP:0011013", - "display": "Abnormal circulating carbohydrate concentration" - }, - { - "code": "HP:0410008", - "display": "Abnormality of the peripheral nervous system" - }, - { - "code": "HP:0200134", - "display": "Epileptic encephalopathy" - }, - { - "code": "HP:0001881", - "display": "Abnormal leukocyte morphology" - }, - { - "code": "HP:0005549", - "display": "obsolete Congenital neutropenia" - }, - { - "code": "HP:0004439", - "display": "Craniofacial dysostosis" - }, - { - "code": "HP:0012443", - "display": "Abnormality of brain morphology" - }, - { - "code": "HP:0000202", - "display": "Oral cleft" - }, - { - "code": "HP:0011842", - "display": "Abnormality of skeletal morphology" - }, - { - "code": "HP:0003808", - "display": "Abnormal muscle tone" - }, - { - "code": "HP:0001574", - "display": "Abnormality of the integument" - }, - { - "code": "HP:0030056", - "display": "Uncombable hair" - }, - { - "code": "HP:0003549", - "display": "Abnormality of connective tissue" - }, - { - "code": "HP:0030875", - "display": "Abnormality of pulmonary circulation" - }, - { - "code": "HP:0000118", - "display": "Phenotypic abnormality" - }, - { - "code": "HP:0012469", - "display": "Infantile spasms" - }, - { - "code": "HP:0032894", - "display": "Seizure precipitated by febrile infection" - }, - { - "code": "HP:0100661", - "display": "Trigeminal neuralgia" - }, - { - "code": "HP:0012207", - "display": "Reduced sperm motility" - }, - { - "code": "HP:0000798", - "display": "Oligospermia" - }, - { - "code": "HP:0012864", - "display": "Abnormal sperm morphology" - }, - { - "code": "HP:0008232", - "display": "Elevated circulating follicle stimulating hormone level" - }, - { - "code": "HP:0040306", - "display": "Decreased male libido" - }, - { - "code": "HP:0012208", - "display": "Immotile sperm" - }, - { - "code": "HP:0000027", - "display": "Azoospermia" - }, - { - "code": "HP:0000870", - "display": "Increased circulating prolactin concentration" - }, - { - "code": "HP:0008187", - "display": "Absence of secondary sex characteristics" - }, - { - "code": "HP:0010469", - "display": "Absent testis" - }, - { - "code": "HP:0011969", - "display": "Elevated circulating luteinizing hormone level" - }, - { - "code": "HP:0040171", - "display": "Decreased serum testosterone level" - }, - { - "code": "HP:0003251", - "display": "Male infertility" - }, - { - "code": "HP:0009804", - "display": "Reduced number of teeth" - }, - { - "code": "HP:0000548", - "display": "Cone/cone-rod dystrophy" - }, - { - "code": "HP:0000546", - "display": "Retinal degeneration" - }, - { - "code": "HP:0008002", - "display": "Abnormality of macular pigmentation" - }, - { - "code": "HP:0000608", - "display": "Macular degeneration" - }, - { - "code": "HP:0030611", - "display": "Retinal pigment epithelial loss on macular OCT" - }, - { - "code": "HP:0001135", - "display": "Chorioretinal dystrophy" - }, - { - "code": "HP:0030468", - "display": "Abnormal multifocal electroretinogram" - }, - { - "code": "HP:00030532", - "display": "Visual acuity test abnormality" - }, - { - "code": "HP:0007401", - "display": "Macular atrophy" - }, - { - "code": "HP:0030466", - "display": "Abnormal full-field electroretinogram" - }, - { - "code": "HP:007737", - "display": "Bone spicule pigmentation of the retina" - }, - { - "code": "HP:0011342", - "display": "Mild global developmental delay" - }, - { - "code": "HP:0030610", - "display": "Photoreceptor outer segment loss on macular OCT" - }, - { - "code": "HP:0007722", - "display": "Retinal pigment epithelial atrophy" - }, - { - "code": "HP:0030493", - "display": "Abnormality of foveal pigmentation" - }, - { - "code": "HP:0007843", - "display": "Attenuation of retinal blood vessels" - }, - { - "code": "HP:0007754", - "display": "Macular dystrophy" - }, - { - "code": "HP:0011509", - "display": "Macular hyperpigmentation" - }, - { - "code": "HP:0008527", - "display": "Congenital sensorineural hearing impairment" - }, - { - "code": "HP:0200070", - "display": "Peripheral retinal atrophy" - }, - { - "code": "HP:0007793", - "display": "Granular macular appearance" - }, - { - "code": "HP:0007987", - "display": "Progressive visual field defects" - }, - { - "code": "HP:0100817", - "display": "Renovascular hypertension" - }, - { - "code": "HP:0007868", - "display": "obsolete Age-related macular degeneration" - }, - { - "code": "HP:0030527", - "display": "Very severe constriction of peripheral visual field" - }, - { - "code": "HP:0030551", - "display": "Visual acuity light perception with projection" - }, - { - "code": "HP:0011505", - "display": "Cystoid macular edema" - }, - { - "code": "HP:0010442", - "display": "Polydactyly" - }, - { - "code": "HP:0007642", - "display": "Congenital stationary night blindness" - }, - { - "code": "HP:0009073", - "display": "Progressive proximal muscle weakness" - }, - { - "code": "HP:0003741", - "display": "Congenital muscular dystrophy" - }, - { - "code": "HP:0100299", - "display": "Muscle fiber inclusion bodies" - }, - { - "code": "HP:0003540", - "display": "Impaired platelet aggregation" - }, - { - "code": "HP:0010489", - "display": "Absent palmar crease" - }, - { - "code": "HP:0009824", - "display": "Upper limb undergrowth" - }, - { - "code": "HP:0002395", - "display": "Lower limb hyperreflexia" - }, - { - "code": "HP:0001138", - "display": "Optic neuropathy" - }, - { - "code": "HP:0007103", - "display": "Hypointensity of cerebral white matter on MRI" - }, - { - "code": "HP:0003458", - "display": "EMG: myopathic abnormalities" - }, - { - "code": "HP:0002987", - "display": "Elbow flexion contracture" - }, - { - "code": "HP:0006466", - "display": "Ankle flexion contracture" - }, - { - "code": "HP:0008458", - "display": "Progressive congenital scoliosis" - }, - { - "code": "HP:0000473", - "display": "Torticollis" - }, - { - "code": "HP:0011800", - "display": "Midface retrusion" - }, - { - "code": "HP:0000597", - "display": "Ophthalmoparesis" - }, - { - "code": "HP:0005853", - "display": "Congenital foot contraction deformities" - }, - { - "code": "HP:0007002", - "display": "Motor axonal neuropathy" - }, - { - "code": "HP:0003327", - "display": "Axial muscle weakness" - }, - { - "code": "HP:0003306", - "display": "Spinal rigidity" - }, - { - "code": "HP:0002068", - "display": "Neuromuscular dysphagia" - }, - { - "code": "HP:0001002", - "display": "obsolete Decreased subcutaneous fat" - }, - { - "code": "HP:0002880", - "display": "obsolete Respiratory difficulties" - }, - { - "code": "HP:0006829", - "display": "Severe muscular hypotonia" - }, - { - "code": "HP:0011448", - "display": "Ankle clonus" - }, - { - "code": "HP:0003487", - "display": "Babinski sign" - }, - { - "code": "HP:0002378", - "display": "Hand tremor" - }, - { - "code": "HP:0002747", - "display": "Respiratory insufficiency due to muscle weakness" - }, - { - "code": "HP:0002579", - "display": "Gastrointestinal dysmotility" - }, - { - "code": "HP:0001041", - "display": "Facial erythema" - }, - { - "code": "HP:0040180", - "display": "Hyperkeratosis pilaris" - }, - { - "code": "HP:0001382", - "display": "Joint hypermobility" - }, - { - "code": "HP:0003722", - "display": "Neck flexor weakness" - }, - { - "code": "HP:0003323", - "display": "Progressive muscle weakness" - }, - { - "code": "HP:0002380", - "display": "Fasciculations" - }, - { - "code": "HP:0012785", - "display": "Flexion contracture of finger" - }, - { - "code": "HP:0007936", - "display": "Restrictive external ophthalmoplegia" - }, - { - "code": "HP:0030319", - "display": "Weakness of facial musculature" - }, - { - "code": "HP:0008936", - "display": "Muscular hypotonia of the trunk" - }, - { - "code": "HP:0030230", - "display": "Central core regions in muscle fibers" - }, - { - "code": "HP:0011471", - "display": "Gastrostomy tube feeding in infancy" - }, - { - "code": "HP:0001290", - "display": "Generalized hypotonia" - }, - { - "code": "HP:0002421", - "display": "Poor head control" - }, - { - "code": "HP:0010301", - "display": "Spinal dysraphism" - }, - { - "code": "HP:0004303", - "display": "Abnormal muscle fiber morphology" - }, - { - "code": "HP:0009046", - "display": "Difficulty running" - }, - { - "code": "HP:0003715", - "display": "Myofibrillar myopathy" - }, - { - "code": "HP:0000467", - "display": "Neck muscle weakness" - }, - { - "code": "HP:0001999", - "display": "Abnormal facial shape" - }, - { - "code": "HP:0002751", - "display": "Kyphoscoliosis" - }, - { - "code": "HP:0030223", - "display": "Perseveration" - }, - { - "code": "HP:0002344", - "display": "Progressive neurologic deterioration" - }, - { - "code": "HP:0002522", - "display": "Areflexia of lower limbs" - }, - { - "code": "HP:0003805", - "display": "Rimmed vacuoles" - }, - { - "code": "HP:0005781", - "display": "Contractures of the large joints" - }, - { - "code": "HP:0040083", - "display": "Toe walking" - }, - { - "code": "HP:0003749", - "display": "Pelvic girdle muscle weakness" - }, - { - "code": "HP:0012444", - "display": "Brain atrophy" - }, - { - "code": "HP:0003738", - "display": "Exercise-induced myalgia" - }, - { - "code": "HP:0003756", - "display": "Skeletal myopathy" - }, - { - "code": "HP:0002492", - "display": "Morphological abnormality of the corticospinal tract" - }, - { - "code": "HP:0100302", - "display": "Muscle fiber tubuloreticular inclusions" - }, - { - "code": "HP:0006817", - "display": "Aplasia/Hypoplasia of the cerebellar vermis" - }, - { - "code": "HP:0003473", - "display": "Fatigable weakness" - }, - { - "code": "HP:0002077", - "display": "Migraine with aura" - }, - { - "code": "HP:0100559", - "display": "Lower limb asymmetry" - }, - { - "code": "HP:0002079", - "display": "Hypoplasia of the corpus callosum" - }, - { - "code": "HP:0002804", - "display": "Arthrogryposis multiplex congenita" - }, - { - "code": "HP:0011623", - "display": "Muscular ventricular septal defect" - }, - { - "code": "HP:0002191", - "display": "Progressive spasticity" - }, - { - "code": "HP:0003390", - "display": "Sensory axonal neuropathy" - }, - { - "code": "HP:0006986", - "display": "Upper limb spasticity" - }, - { - "code": "HP:0002464", - "display": "Spastic dysarthria" - }, - { - "code": "HP:0001308", - "display": "Tongue fasciculations" - }, - { - "code": "HP:0007010", - "display": "Poor fine motor coordination" - }, - { - "code": "HP:0003737", - "display": "Mitochondrial myopathy" - }, - { - "code": "HP:0008012", - "display": "obsolete Congenital myopia" - }, - { - "code": "HP:0008872", - "display": "Feeding difficulties in infancy" - }, - { - "code": "HP:0005750", - "display": "Contractures of the joints of the lower limbs" - }, - { - "code": "HP:0009067", - "display": "Progressive spinal muscular atrophy" - }, - { - "code": "HP:0001623", - "display": "Breech presentation" - }, - { - "code": "HP:0001374", - "display": "Congenital hip dislocation" - }, - { - "code": "HP:0002359", - "display": "Frequent falls" - }, - { - "code": "HP:0003803", - "display": "Type 1 muscle fiber predominance" - }, - { - "code": "HP:0011410", - "display": "Caesarian section" - }, - { - "code": "HP:0008947", - "display": "Infantile muscular hypotonia" - }, - { - "code": "HP:0100501", - "display": "Recurrent bronchiolitis" - }, - { - "code": "HP:0003789", - "display": "Minicore myopathy" - }, - { - "code": "HP:0000544", - "display": "External ophthalmoplegia" - }, - { - "code": "HP:0001605", - "display": "Vocal cord paralysis" - }, - { - "code": "HP:0003712", - "display": "Skeletal muscle hypertrophy" - }, - { - "code": "HP:0012507", - "display": "Weakness of orbicularis oculi muscle" - }, - { - "code": "HP:0009816", - "display": "Lower limb undergrowth" - }, - { - "code": "HP:0008935", - "display": "Generalized neonatal hypotonia" - }, - { - "code": "HP:0003484", - "display": "Upper limb muscle weakness" - }, - { - "code": "HP:0008331", - "display": "Elevated creatine kinase after exercise" - }, - { - "code": "HP:0001315", - "display": "Reduced tendon reflexes" - }, - { - "code": "HP:0012473", - "display": "Tongue atrophy" - }, - { - "code": "HP:0003273", - "display": "Hip contracture" - }, - { - "code": "HP:0006380", - "display": "Knee flexion contracture" - }, - { - "code": "HP:0003752", - "display": "Episodic flaccid weakness" - }, - { - "code": "HP:0100298", - "display": "Motheaten muscle fibers" - }, - { - "code": "HP:0003693", - "display": "Distal amyotrophy" - }, - { - "code": "HP:0002167", - "display": "Neurological speech impairment" - }, - { - "code": "HP:0003388", - "display": "Easy fatigability" - }, - { - "code": "HP:0001348", - "display": "Brisk reflexes" - }, - { - "code": "HP:0003445", - "display": "EMG: neuropathic changes" - }, - { - "code": "HP:0009063", - "display": "Progressive distal muscle weakness" - }, - { - "code": "HP:0003720", - "display": "Generalized muscle hypertrophy" - }, - { - "code": "HP:0002493", - "display": "Upper motor neuron dysfunction" - }, - { - "code": "HP:0012448", - "display": "Delayed myelination" - }, - { - "code": "HP:0001338", - "display": "Partial agenesis of the corpus callosum" - }, - { - "code": "HP:0006879", - "display": "Pontocerebellar atrophy" - }, - { - "code": "HP:0200101", - "display": "Decreased/absent ankle reflexes" - }, - { - "code": "HP:0009020", - "display": "Exercise-induced muscle fatigue" - }, - { - "code": "HP:0002067", - "display": "Bradykinesia" - }, - { - "code": "HP:0012751", - "display": "Abnormal basal ganglia MRI signal intensity" - }, - { - "code": "HP:0003355", - "display": "Aminoaciduria" - }, - { - "code": "HP:0012450", - "display": "Chronic constipation" - }, - { - "code": "HP:0011834", - "display": "Moyamoya phenomenon" - }, - { - "code": "HP:0001297", - "display": "Stroke" - }, - { - "code": "HP:0200049", - "display": "Upper limb hypertonia" - }, - { - "code": "HP:0008981", - "display": "Calf muscle hypertrophy" - }, - { - "code": "HP:0006785", - "display": "Limb-girdle muscular dystrophy" - }, - { - "code": "HP:0006957", - "display": "Loss of ability to walk" - }, - { - "code": "HP:0030098", - "display": "Reduced muscle dystrophin expression" - }, - { - "code": "HP:0030115", - "display": "Reduced muscle fiber dysferlin" - }, - { - "code": "HP:0002058", - "display": "Myopathic facies" - }, - { - "code": "HP:0007858", - "display": "Chorioretinal lacunae" - }, - { - "code": "HP:0006657", - "display": "Hypoplasia of first ribs" - }, - { - "code": "HP:0007165", - "display": "Periventricular heterotopia" - }, - { - "code": "HP:0009779", - "display": "3-4 toe syndactyly" - }, - { - "code": "HP:0010665", - "display": "Bilateral coxa valga" - }, - { - "code": "HP:0007598", - "display": "Bilateral single transverse palmar creases" - }, - { - "code": "HP:0006101", - "display": "Finger syndactyly" - }, - { - "code": "HP:0010511", - "display": "Long toe" - }, - { - "code": "HP:0002370", - "display": "Poor coordination" - }, - { - "code": "HP:0000480", - "display": "Retinal coloboma" - }, - { - "code": "HP:0001770", - "display": "Toe syndactyly" - }, - { - "code": "HP:0010851", - "display": "EEG with burst suppression" - }, - { - "code": "HP:0002791", - "display": "Hypoventilation" - }, - { - "code": "HP:0040075", - "display": "Hypopituitarism" - }, - { - "code": "HP:0012506", - "display": "Small pituitary gland" - }, - { - "code": "HP:0000538", - "display": "Pseudopapilledema" - }, - { - "code": "HP:0012717", - "display": "Severe conductive hearing impairment" - }, - { - "code": "HP:0001370", - "display": "Rheumatoid arthritis" - }, - { - "code": "HP:0000016", - "display": "Urinary retention" - }, - { - "code": "HP:0012537", - "display": "Food intolerance" - }, - { - "code": "HP:0011297", - "display": "Abnormal digit morphology" - }, - { - "code": "HP:0001273", - "display": "Abnormal corpus callosum morphology" - }, - { - "code": "HP:0030148", - "display": "Heart murmur" - }, - { - "code": "HP:0045018", - "display": "Partial duplication of eyebrows" - }, - { - "code": "HP:0008998", - "display": "Pectoralis hypoplasia" - }, - { - "code": "HP:0001707", - "display": "Abnormal right ventricle morphology" - }, - { - "code": "HP:0001540", - "display": "Diastasis recti" - }, - { - "code": "HP:0100693", - "display": "Iridodonesis" - }, - { - "code": "HP:0002265", - "display": "Large fleshy ears" - }, - { - "code": "HP:0001132", - "display": "Lens subluxation" - }, - { - "code": "HP:0004927", - "display": "Pulmonary artery dilatation" - }, - { - "code": "HP:0005619", - "display": "Thoracolumbar kyphosis" - }, - { - "code": "HP:0008619", - "display": "Bilateral sensorineural hearing impairment" - }, - { - "code": "HP:0001045", - "display": "Vitiligo" - }, - { - "code": "HP:0009124", - "display": "Abnormal adipose tissue morphology" - }, - { - "code": "HP:0002979", - "display": "Bowing of the legs" - }, - { - "code": "HP:0000455", - "display": "Broad nasal tip" - }, - { - "code": "HP:0001007", - "display": "Hirsutism" - }, - { - "code": "HP:0010314", - "display": "Premature thelarche" - }, - { - "code": "HP:0000075", - "display": "Renal duplication" - }, - { - "code": "HP:0000368", - "display": "Low-set, posteriorly rotated ears" - }, - { - "code": "HP:0001052", - "display": "Nevus flammeus" - }, - { - "code": "HP:0200048", - "display": "Cyanotic episode" - }, - { - "code": "HP:0001902", - "display": "Giant platelets" - }, - { - "code": "HP:0030043", - "display": "Hip subluxation" - }, - { - "code": "HP:0002938", - "display": "Lumbar hyperlordosis" - }, - { - "code": "HP:0030084", - "display": "Clinodactyly" - }, - { - "code": "HP:0005560", - "display": "Imbalanced hemoglobin synthesis" - }, - { - "code": "HP:0001539", - "display": "Omphalocele" - }, - { - "code": "HP:0009778", - "display": "Short thumb" - }, - { - "code": "HP:0002277", - "display": "Horner syndrome" - }, - { - "code": "HP:0011701", - "display": "Multifocal atrial tachycardia" - }, - { - "code": "HP:0005274", - "display": "Prominent nasal tip" - }, - { - "code": "HP:0001262", - "display": "Excessive daytime somnolence" - }, - { - "code": "HP:0001285", - "display": "Spastic tetraparesis" - }, - { - "code": "HP:0012171", - "display": "Stereotypical hand wringing" - }, - { - "code": "HP:0002518", - "display": "Abnormality of the periventricular white matter" - }, - { - "code": "HP:0005692", - "display": "Joint hyperflexibility" - }, - { - "code": "HP:0007440", - "display": "Generalized hyperpigmentation" - }, - { - "code": "HP:0001805", - "display": "Onychogryposis" - }, - { - "code": "HP:0011945", - "display": "Bronchiolitis obliterans organizing pneumonia" - }, - { - "code": "HP:0003763", - "display": "Bruxism" - }, - { - "code": "HP:0010500", - "display": "Hyperextensibility of the knee" - }, - { - "code": "HP:0040115", - "display": "Abnormality of the Eustachian tube" - }, - { - "code": "HP:0008751", - "display": "Laryngeal cleft" - }, - { - "code": "HP:0000403", - "display": "Recurrent otitis media" - }, - { - "code": "HP:0001787", - "display": "Abnormal delivery" - }, - { - "code": "HP:0002571", - "display": "Achalasia" - }, - { - "code": "HP:0002615", - "display": "Hypotension" - }, - { - "code": "HP:0003550", - "display": "Predominantly lower limb lymphedema" - }, - { - "code": "HP:0030363", - "display": "Primary Caesarian section" - }, - { - "code": "HP:0001727", - "display": "Thromboembolic stroke" - }, - { - "code": "HP:0100603", - "display": "Toxemia of pregnancy" - }, - { - "code": "HP:0010836", - "display": "Abnormal circulating copper concentration" - }, - { - "code": "HP:0000356", - "display": "Abnormality of the outer ear" - }, - { - "code": "HP:0002197", - "display": "Generalized-onset seizure" - }, - { - "code": "HP:0011436", - "display": "Abnormal maternal serum screening" - }, - { - "code": "HP:0003517", - "display": "Birth length greater than 97th percentile" - }, - { - "code": "HP:0003561", - "display": "Birth length less than 3rd percentile" - }, - { - "code": "HP:0012188", - "display": "Hyperemesis gravidarum" - }, - { - "code": "HP:0010519", - "display": "Increased fetal movement" - }, - { - "code": "HP:0030244", - "display": "Maternal fever in pregnancy" - }, - { - "code": "HP:0008071", - "display": "Maternal hypertension" - }, - { - "code": "HP:0100622", - "display": "Maternal seizure" - }, - { - "code": "HP:0011438", - "display": "Maternal teratogenic exposure" - }, - { - "code": "HP:0001998", - "display": "Neonatal hypoglycemia" - }, - { - "code": "HP:0040187", - "display": "Neonatal sepsis" - }, - { - "code": "HP:0002033", - "display": "Poor suck" - }, - { - "code": "HP:0006579", - "display": "Prolonged neonatal jaundice" - }, - { - "code": "HP:0001724", - "display": "obsolete Aortic dilatation" - }, - { - "code": "HP:0010621", - "display": "Cutaneous syndactyly of toes" - }, - { - "code": "HP:0001880", - "display": "Eosinophilia" - }, - { - "code": "HP:0000162", - "display": "Glossoptosis" - }, - { - "code": "HP:0100578", - "display": "Lipoatrophy" - }, - { - "code": "HP:0002562", - "display": "Low-set nipples" - }, - { - "code": "HP:0012893", - "display": "Neck muscle hypertrophy" - }, - { - "code": "HP:0001027", - "display": "Soft, doughy skin" - }, - { - "code": "HP:0100738", - "display": "Abnormal eating behavior" - }, - { - "code": "HP:0007328", - "display": "Impaired pain sensation" - }, - { - "code": "HP:0002878", - "display": "Respiratory failure" - }, - { - "code": "HP:0001776", - "display": "Bilateral talipes equinovarus" - }, - { - "code": "HP:0001360", - "display": "Holoprosencephaly" - }, - { - "code": "HP:0001973", - "display": "Autoimmune thrombocytopenia" - }, - { - "code": "HP:0100749", - "display": "Chest pain" - }, - { - "code": "HP:0012531", - "display": "Pain" - }, - { - "code": "HP:0007585", - "display": "Skin fragility with non-scarring blistering" - }, - { - "code": "HP:0002108", - "display": "Spontaneous pneumothorax" - }, - { - "code": "HP:0006562", - "display": "Viral hepatitis" - }, - { - "code": "HP:0012647", - "display": "Abnormal inflammatory response" - }, - { - "code": "HP:0012088", - "display": "Abnormal urinary odor" - }, - { - "code": "HP:0011458", - "display": "Abdominal symptom" - }, - { - "code": "HP:0002829", - "display": "Arthralgia" - }, - { - "code": "HP:0010783", - "display": "Erythema" - }, - { - "code": "HP:0010307", - "display": "Stridor" - }, - { - "code": "HP:0001269", - "display": "Hemiparesis" - }, - { - "code": "HP:0006532", - "display": "Recurrent pneumonia" - }, - { - "code": "HP:0002580", - "display": "Volvulus" - }, - { - "code": "HP:0012387", - "display": "Bronchitis" - }, - { - "code": "HP:0001266", - "display": "Choreoathetosis" - }, - { - "code": "HP:0001531", - "display": "Failure to thrive in infancy" - }, - { - "code": "HP:0011470", - "display": "Nasogastric tube feeding in infancy" - }, - { - "code": "HP:0001361", - "display": "Nystagmus-induced head nodding" - }, - { - "code": "HP:0001997", - "display": "Gout" - }, - { - "code": "HP:0000965", - "display": "Cutis marmorata" - }, - { - "code": "HP:0010316", - "display": "Ebstein anomaly of the tricuspid valve" - }, - { - "code": "HP:0010543", - "display": "Opsoclonus" - }, - { - "code": "HP:0007704", - "display": "Paroxysmal involuntary eye movements" - }, - { - "code": "HP:0030364", - "display": "Secondary Caesarian section" - }, - { - "code": "HP:0007738", - "display": "Uncontrolled eye movements" - }, - { - "code": "HP:0030366", - "display": "Delivery by Odon device" - }, - { - "code": "HP:0011411", - "display": "Forceps delivery" - }, - { - "code": "HP:0030369", - "display": "Induced vaginal delivery" - }, - { - "code": "HP:0005268", - "display": "Spontaneous abortion" - }, - { - "code": "HP:0030365", - "display": "Vaginal birth after Caesarian" - }, - { - "code": "HP:0011412", - "display": "Ventouse delivery" - }, - { - "code": "HP:0002572", - "display": "Episodic vomiting" - }, - { - "code": "HP:0030350", - "display": "Erythematous papule" - }, - { - "code": "HP:0001386", - "display": "Joint swelling" - }, - { - "code": "HP:0000147", - "display": "Polycystic ovaries" - }, - { - "code": "HP:0012412", - "display": "Premature adrenarche" - }, - { - "code": "HP:0004411", - "display": "Deviated nasal septum" - }, - { - "code": "HP:0040183", - "display": "Encopresis" - }, - { - "code": "HP:0100507", - "display": "Reduced blood folate concentration" - }, - { - "code": "HP:0007011", - "display": "Fourth cranial nerve palsy" - }, - { - "code": "HP:0000375", - "display": "Abnormal cochlea morphology" - }, - { - "code": "HP:0009911", - "display": "Abnormal temporal bone morphology" - }, - { - "code": "HP:0000081", - "display": "Duplicated collecting system" - }, - { - "code": "HP:0006894", - "display": "Hypoplastic olfactory lobes" - }, - { - "code": "HP:0011380", - "display": "Morphological abnormality of the semicircular canal" - }, - { - "code": "HP:0000110", - "display": "Renal dysplasia" - }, - { - "code": "HP:0030025", - "display": "Auricular pit" - }, - { - "code": "HP:0010044", - "display": "Short 4th metacarpal" - }, - { - "code": "HP:0010047", - "display": "Short 5th metacarpal" - }, - { - "code": "HP:0000201", - "display": "Pierre-Robin sequence" - }, - { - "code": "HP:0100837", - "display": "Atrophodermia vermiculata" - }, - { - "code": "HP:0002673", - "display": "Coxa valga" - }, - { - "code": "HP:0001476", - "display": "Delayed closure of the anterior fontanelle" - }, - { - "code": "HP:0011069", - "display": "Increased number of teeth" - }, - { - "code": "HP:0009879", - "display": "Simplified gyral pattern" - }, - { - "code": "HP:0006315", - "display": "Single median maxillary incisor" - }, - { - "code": "HP:0001194", - "display": "Abnormalities of placenta or umbilical cord" - }, - { - "code": "HP:0100767", - "display": "Abnormal placenta morphology" - }, - { - "code": "HP:0006543", - "display": "Cardiorespiratory arrest" - }, - { - "code": "HP:0003074", - "display": "Hyperglycemia" - }, - { - "code": "HP:0000842", - "display": "Hyperinsulinemia" - }, - { - "code": "HP:0011951", - "display": "Aspiration pneumonia" - }, - { - "code": "HP:0006528", - "display": "Chronic lung disease" - }, - { - "code": "HP:0002383", - "display": "Encephalitis" - }, - { - "code": "HP:0000388", - "display": "Otitis media" - }, - { - "code": "HP:0002530", - "display": "Axial dystonia" - }, - { - "code": "HP:0002780", - "display": "Bronchomalacia" - }, - { - "code": "HP:0008755", - "display": "Laryngotracheomalacia" - }, - { - "code": "HP:0000308", - "display": "Microretrognathia" - }, - { - "code": "HP:0002786", - "display": "Tracheobronchomalacia" - }, - { - "code": "HP:0012389", - "display": "Appendicular hypotonia" - }, - { - "code": "HP:0011323", - "display": "Cleft of chin" - }, - { - "code": "HP:0000417", - "display": "Slender nose" - }, - { - "code": "HP:0001863", - "display": "Toe clinodactyly" - }, - { - "code": "HP:0008386", - "display": "Aplasia/Hypoplasia of the nails" - }, - { - "code": "HP:0006989", - "display": "Dysplastic corpus callosum" - }, - { - "code": "HP:0100954", - "display": "Open operculum" - }, - { - "code": "HP:0004482", - "display": "Relative macrocephaly" - }, - { - "code": "HP:3000033", - "display": "Abnormal nasopharyngeal adenoid morphology" - }, - { - "code": "HP:0009062", - "display": "Infantile axial hypotonia" - }, - { - "code": "HP:0002189", - "display": "obsolete Excessive daytime sleepiness" - }, - { - "code": "HP:0002141", - "display": "Gait imbalance" - }, - { - "code": "HP:0012734", - "display": "Ketotic hypoglycemia" - }, - { - "code": "HP:0005968", - "display": "Temperature instability" - }, - { - "code": "HP:0012538", - "display": "Gluten intolerance" - }, - { - "code": "HP:0000979", - "display": "Purpura" - }, - { - "code": "HP:0001988", - "display": "Recurrent hypoglycemia" - }, - { - "code": "HP:0001488", - "display": "Bilateral ptosis" - }, - { - "code": "HP:0011229", - "display": "Broad eyebrow" - }, - { - "code": "HP:0004440", - "display": "Coronal craniosynostosis" - }, - { - "code": "HP:0004453", - "display": "Overfolding of the superior helices" - }, - { - "code": "HP:0012547", - "display": "Abnormal involuntary eye movements" - }, - { - "code": "HP:0100814", - "display": "Blue nevus" - }, - { - "code": "HP:0010751", - "display": "Dimple chin" - }, - { - "code": "HP:0007087", - "display": "obsolete Involuntary jerking movements" - }, - { - "code": "HP:0012498", - "display": "Nuchal cord" - }, - { - "code": "HP:0002472", - "display": "Small cerebral cortex" - }, - { - "code": "HP:0100307", - "display": "Cerebellar hemisphere hypoplasia" - }, - { - "code": "HP:0002151", - "display": "Increased serum lactate" - }, - { - "code": "HP:0001698", - "display": "Pericardial effusion" - }, - { - "code": "HP:0006903", - "display": "Congenital peripheral neuropathy" - }, - { - "code": "HP:0006895", - "display": "Lower limb hypertonia" - }, - { - "code": "HP:0002744", - "display": "Bilateral cleft lip and palate" - }, - { - "code": "HP:0010664", - "display": "Fusion of the left and right thalami" - }, - { - "code": "HP:0000327", - "display": "Hypoplasia of the maxilla" - }, - { - "code": "HP:0000474", - "display": "Thickened nuchal skin fold" - }, - { - "code": "HP:0000105", - "display": "Enlarged kidney" - }, - { - "code": "HP:0000113", - "display": "Polycystic kidney dysplasia" - }, - { - "code": "HP:0000104", - "display": "Renal agenesis" - }, - { - "code": "HP:0001362", - "display": "Calvarial skull defect" - }, - { - "code": "HP:0008245", - "display": "Pituitary hypothyroidism" - }, - { - "code": "HP:0001552", - "display": "Barrel-shaped chest" - }, - { - "code": "HP:0006297", - "display": "Hypoplasia of dental enamel" - }, - { - "code": "HP:0100023", - "display": "Recurrent hand flapping" - }, - { - "code": "HP:0005518", - "display": "Increased mean corpuscular volume" - }, - { - "code": "HP:0012418", - "display": "Hypoxemia" - }, - { - "code": "HP:0100259", - "display": "Postaxial polydactyly" - }, - { - "code": "HP:0010814", - "display": "Abnormal position of hair whorl" - }, - { - "code": "HP:0003764", - "display": "Nevus" - }, - { - "code": "HP:0000445", - "display": "Wide nose" - }, - { - "code": "HP:0010677", - "display": "Enuresis nocturna" - }, - { - "code": "HP:0001510", - "display": "Growth delay" - }, - { - "code": "HP:0012428", - "display": "Prominent calcaneus" - }, - { - "code": "HP:0012471", - "display": "Thick vermilion border" - }, - { - "code": "HP:0007110", - "display": "Central hypoventilation" - }, - { - "code": "HP:0010614", - "display": "Fibroma" - }, - { - "code": "HP:0001034", - "display": "Hypermelanotic macule" - }, - { - "code": "HP:0011365", - "display": "Patchy hypopigmentation of hair" - }, - { - "code": "HP:0001920", - "display": "Renal artery stenosis" - }, - { - "code": "HP:0002828", - "display": "Multiple joint contractures" - }, - { - "code": "HP:0002144", - "display": "Tethered cord" - }, - { - "code": "HP:0010964", - "display": "Abnormal circulating long-chain fatty-acid concentration" - }, - { - "code": "HP:0010536", - "display": "Central sleep apnea" - }, - { - "code": "HP:0011262", - "display": "Crimped helix" - }, - { - "code": "HP:0040079", - "display": "Irregular dentition" - }, - { - "code": "HP:0011481", - "display": "Abnormal lacrimal duct morphology" - }, - { - "code": "HP:0000220", - "display": "Velopharyngeal insufficiency" - }, - { - "code": "HP:0002153", - "display": "Hyperkalemia" - }, - { - "code": "HP:0002148", - "display": "Hypophosphatemia" - }, - { - "code": "HP:0012621", - "display": "Persistent cloaca" - }, - { - "code": "HP:0000867", - "display": "Secondary hyperparathyroidism" - }, - { - "code": "HP:0003762", - "display": "Uterus didelphys" - }, - { - "code": "HP:0100512", - "display": "Low levels of vitamin D" - }, - { - "code": "HP:0012156", - "display": "Hemophagocytosis" - }, - { - "code": "HP:0008209", - "display": "Premature ovarian insufficiency" - }, - { - "code": "HP:0004349", - "display": "Reduced bone mineral density" - }, - { - "code": "HP:0001924", - "display": "Sideroblastic anemia" - }, - { - "code": "HP:0011703", - "display": "Sinus tachycardia" - }, - { - "code": "HP:0010609", - "display": "Skin tags" - }, - { - "code": "HP:0002725", - "display": "Systemic lupus erythematosus" - }, - { - "code": "HP:0003193", - "display": "Allergic rhinitis" - }, - { - "code": "HP:0006896", - "display": "Hypnopompic hallucinations" - }, - { - "code": "HP:0002524", - "display": "Cataplexy" - }, - { - "code": "HP:0005227", - "display": "Adenomatous colonic polyposis" - }, - { - "code": "HP:0012173", - "display": "Orthostatic tachycardia" - }, - { - "code": "HP:0001271", - "display": "Polyneuropathy" - }, - { - "code": "HP:0009120", - "display": "Aplasia/Hypoplasia involving the sinuses" - }, - { - "code": "HP:0000625", - "display": "Eyelid coloboma" - }, - { - "code": "HP:0009754", - "display": "Fibrous syngnathia" - }, - { - "code": "HP:0012478", - "display": "Temporomandibular joint ankylosis" - }, - { - "code": "HP:0001233", - "display": "2-3 finger syndactyly" - }, - { - "code": "HP:0000811", - "display": "Abnormal external genitalia" - }, - { - "code": "HP:0005120", - "display": "Abnormal cardiac atrium morphology" - }, - { - "code": "HP:0008388", - "display": "Abnormal toenail morphology" - }, - { - "code": "HP:0011467", - "display": "Absent gallbladder" - }, - { - "code": "HP:0010760", - "display": "Absent toe" - }, - { - "code": "HP:0001545", - "display": "Anteriorly placed anus" - }, - { - "code": "HP:0001640", - "display": "Cardiomegaly" - }, - { - "code": "HP:0002990", - "display": "Fibular aplasia" - }, - { - "code": "HP:0004443", - "display": "Lambdoidal craniosynostosis" - }, - { - "code": "HP:0008569", - "display": "Microtia, second degree" - }, - { - "code": "HP:0006277", - "display": "Pancreatic hyperplasia" - }, - { - "code": "HP:0010445", - "display": "Primum atrial septal defect" - }, - { - "code": "HP:0011640", - "display": "Single coronary artery origin" - }, - { - "code": "HP:0011608", - "display": "Type II truncus arteriosus" - }, - { - "code": "HP:0011327", - "display": "Posterior plagiocephaly" - }, - { - "code": "HP:0007655", - "display": "Eversion of lateral third of lower eyelids" - }, - { - "code": "HP:0010747", - "display": "Medial flaring of the eyebrow" - }, - { - "code": "HP:0005957", - "display": "Breathing dysregulation" - }, - { - "code": "HP:0000992", - "display": "Cutaneous photosensitivity" - }, - { - "code": "HP:0011995", - "display": "Atrial septal dilatation" - }, - { - "code": "HP:0000377", - "display": "Abnormality of the pinna" - }, - { - "code": "HP:0011266", - "display": "Microtia, first degree" - }, - { - "code": "HP:0012650", - "display": "Perisylvian polymicrogyria" - }, - { - "code": "HP:0004970", - "display": "Ascending tubular aorta aneurysm" - }, - { - "code": "HP:0008348", - "display": "Decreased circulating IgG2 level" - }, - { - "code": "HP:0012115", - "display": "Hepatitis" - }, - { - "code": "HP:0006979", - "display": "Sleep-wake cycle disturbance" - }, - { - "code": "HP:0008587", - "display": "Mild neurosensory hearing impairment" - }, - { - "code": "HP:0006097", - "display": "3-4 finger syndactyly" - }, - { - "code": "HP:0005263", - "display": "Gastritis" - }, - { - "code": "HP:0200043", - "display": "Verrucae" - }, - { - "code": "HP:0009600", - "display": "Flexion contracture of thumb" - }, - { - "code": "HP:0010818", - "display": "Generalized tonic seizure" - }, - { - "code": "HP:0002599", - "display": "Head titubation" - }, - { - "code": "HP:0002090", - "display": "Pneumonia" - }, - { - "code": "HP:0030423", - "display": "Splenic cyst" - }, - { - "code": "HP:0030187", - "display": "Titubation" - }, - { - "code": "HP:0002375", - "display": "Hypokinesia" - }, - { - "code": "HP:0007166", - "display": "Paroxysmal dyskinesia" - }, - { - "code": "HP:0003077", - "display": "Hyperlipidemia" - }, - { - "code": "HP:0000017", - "display": "Nocturia" - }, - { - "code": "HP:0100555", - "display": "Asymmetric growth" - }, - { - "code": "HP:0011847", - "display": "Giant cell tumor of bone" - }, - { - "code": "HP:0000112", - "display": "Nephropathy" - }, - { - "code": "HP:0000246", - "display": "Sinusitis" - }, - { - "code": "HP:0001012", - "display": "Multiple lipomas" - }, - { - "code": "HP:0000851", - "display": "Congenital hypothyroidism" - }, - { - "code": "HP:0002345", - "display": "Action tremor" - }, - { - "code": "HP:0002677", - "display": "Small foramen magnum" - }, - { - "code": "HP:0011947", - "display": "Respiratory tract infection" - }, - { - "code": "HP:0012151", - "display": "Hemothorax" - }, - { - "code": "HP:0005988", - "display": "Congenital muscular torticollis" - }, - { - "code": "HP:0002329", - "display": "Drowsiness" - }, - { - "code": "HP:0012395", - "display": "Seasonal allergy" - }, - { - "code": "HP:0011679", - "display": "Tetralogy of Fallot with pulmonary stenosis" - }, - { - "code": "HP:0001864", - "display": "Clinodactyly of the 5th toe" - }, - { - "code": "HP:0006934", - "display": "Congenital nystagmus" - }, - { - "code": "HP:0100355", - "display": "Contractures of the distal interphalangeal joint of the 5th toe" - }, - { - "code": "HP:0007894", - "display": "Hypopigmentation of the fundus" - }, - { - "code": "HP:0012377", - "display": "Hemianopia" - }, - { - "code": "HP:0002354", - "display": "Memory impairment" - }, - { - "code": "HP:0000872", - "display": "Hashimoto thyroiditis" - }, - { - "code": "HP:0002519", - "display": "Hypnagogic hallucinations" - }, - { - "code": "HP:0010647", - "display": "Abnormal elasticity of skin" - }, - { - "code": "HP:0002592", - "display": "Gastric ulcer" - }, - { - "code": "HP:0004938", - "display": "Tortuous cerebral arteries" - }, - { - "code": "HP:0004948", - "display": "Vascular tortuosity" - }, - { - "code": "HP:0002516", - "display": "Increased intracranial pressure" - }, - { - "code": "HP:0006460", - "display": "Increased laxity of ankles" - }, - { - "code": "HP:0002317", - "display": "Unsteady gait" - }, - { - "code": "HP:0000182", - "display": "Movement abnormality of the tongue" - }, - { - "code": "HP:0009887", - "display": "Abnormality of hair pigmentation" - }, - { - "code": "HP:0005824", - "display": "Clinodactyly of the 2nd toe" - }, - { - "code": "HP:0002212", - "display": "Curly hair" - }, - { - "code": "HP:0009803", - "display": "Short phalanx of finger" - }, - { - "code": "HP:0000572", - "display": "Visual loss" - }, - { - "code": "HP:0005216", - "display": "Impaired mastication" - }, - { - "code": "HP:0000619", - "display": "Impaired convergence" - }, - { - "code": "HP:0002403", - "display": "Positive Romberg sign" - }, - { - "code": "HP:0008744", - "display": "Abnormal aryepiglottic fold morphology" - }, - { - "code": "HP:0002374", - "display": "Diminished movement" - }, - { - "code": "HP:0008277", - "display": "Abnormal blood zinc concentration" - }, - { - "code": "HP:0012781", - "display": "Mid-frequency hearing loss" - }, - { - "code": "HP:0100758", - "display": "Gangrene" - }, - { - "code": "HP:0003256", - "display": "Abnormality of the coagulation cascade" - }, - { - "code": "HP:0004387", - "display": "Enterocolitis" - }, - { - "code": "HP:0011029", - "display": "Internal hemorrhage" - }, - { - "code": "HP:0011649", - "display": "Patent ductus arteriosus after premature birth" - }, - { - "code": "HP:0012050", - "display": "Anasarca" - }, - { - "code": "HP:0001683", - "display": "Ectopia cordis" - }, - { - "code": "HP:0011682", - "display": "Perimembranous ventricular septal defect" - }, - { - "code": "HP:0010624", - "display": "Aplastic/hypoplastic toenail" - }, - { - "code": "HP:0002705", - "display": "High, narrow palate" - }, - { - "code": "HP:0011340", - "display": "Incomplete cleft of the upper lip" - }, - { - "code": "HP:0011613", - "display": "Interrupted aortic arch type B" - }, - { - "code": "HP:0006167", - "display": "Prominent proximal interphalangeal joints" - }, - { - "code": "HP:0002918", - "display": "Hypermagnesemia" - }, - { - "code": "HP:0011937", - "display": "Hypoplastic fifth toenail" - }, - { - "code": "HP:0001067", - "display": "Neurofibromas" - }, - { - "code": "HP:0011403", - "display": "Abnormal umbilical cord blood vessels" - }, - { - "code": "HP:0003316", - "display": "Butterfly vertebrae" - }, - { - "code": "HP:0002247", - "display": "Duodenal atresia" - }, - { - "code": "HP:0008439", - "display": "Lumbar hemivertebrae" - }, - { - "code": "HP:0011599", - "display": "Mesocardia" - }, - { - "code": "HP:0008467", - "display": "Thoracic hemivertebrae" - }, - { - "code": "HP:0004626", - "display": "Lumbar scoliosis" - }, - { - "code": "HP:0006808", - "display": "Cerebral hypomyelination" - }, - { - "code": "HP:0002926", - "display": "Abnormality of thyroid physiology" - }, - { - "code": "HP:0007970", - "display": "Congenital ptosis" - } - ] +{ + "resourceType" : "CodeSystem", + "id" : "hpo", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Properties</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Type</b></td><td><b>Description</b></td></tr><tr><td>parent</td><td>code</td><td>Parent codes.</td></tr><tr><td>imported</td><td>boolean</td><td>Indicates if the concept is imported from another code system.</td></tr><tr><td>root</td><td>boolean</td><td>Indicates if this concept is a root concept (i.e. Thing is equivalent or a direct parent)</td></tr><tr><td>deprecated</td><td>boolean</td><td>Indicates if this concept is deprecated.</td></tr></table><p><b>Filters</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Description</b></td><td><b>operator</b></td><td><b>Value</b></td></tr><tr><td>root</td><td/><td>= </td><td>True or false.</td></tr><tr><td>deprecated</td><td/><td>= </td><td>True or false.</td></tr><tr><td>imported</td><td/><td>= </td><td>True or false</td></tr></table><p>This code system <code>http://purl.obolibrary.org/obo/hp.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">HP:0000365<a name=\"hpo-HP.580000365\"> </a></td><td>Hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002564<a name=\"hpo-HP.580002564\"> </a></td><td>obsolete Malformation of the heart and great vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0001028<a name=\"hpo-HP.580001028\"> </a></td><td>Hemangioma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000476<a name=\"hpo-HP.580000476\"> </a></td><td>Cystic hygroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000568<a name=\"hpo-HP.580000568\"> </a></td><td>Microphthalmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000518<a name=\"hpo-HP.580000518\"> </a></td><td>Cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000612<a name=\"hpo-HP.580000612\"> </a></td><td>Iris coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000567<a name=\"hpo-HP.580000567\"> </a></td><td>Chorioretinal coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000316<a name=\"hpo-HP.580000316\"> </a></td><td>Hypertelorism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000482<a name=\"hpo-HP.580000482\"> </a></td><td>Microcornea</td></tr><tr><td style=\"white-space:nowrap\">HP:0000588<a name=\"hpo-HP.580000588\"> </a></td><td>Optic nerve coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0004426<a name=\"hpo-HP.580004426\"> </a></td><td>Abnormality of the cheek</td></tr><tr><td style=\"white-space:nowrap\">HP:0009125<a name=\"hpo-HP.580009125\"> </a></td><td>Lipodystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002023<a name=\"hpo-HP.580002023\"> </a></td><td>Anal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003468<a name=\"hpo-HP.580003468\"> </a></td><td>Abnormal vertebral morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000545<a name=\"hpo-HP.580000545\"> </a></td><td>Myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000122<a name=\"hpo-HP.580000122\"> </a></td><td>Unilateral renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002143<a name=\"hpo-HP.580002143\"> </a></td><td>Abnormality of the spinal cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0003508<a name=\"hpo-HP.580003508\"> </a></td><td>Proportionate short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0000271<a name=\"hpo-HP.580000271\"> </a></td><td>Abnormality of the face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000637<a name=\"hpo-HP.580000637\"> </a></td><td>Long palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000492<a name=\"hpo-HP.580000492\"> </a></td><td>Abnormal eyelid morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000389<a name=\"hpo-HP.580000389\"> </a></td><td>Chronic otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0000400<a name=\"hpo-HP.580000400\"> </a></td><td>Macrotia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000405<a name=\"hpo-HP.580000405\"> </a></td><td>Conductive hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0012712<a name=\"hpo-HP.580012712\"> </a></td><td>Mild hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0005280<a name=\"hpo-HP.580005280\"> </a></td><td>Depressed nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000431<a name=\"hpo-HP.580000431\"> </a></td><td>Wide nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000319<a name=\"hpo-HP.580000319\"> </a></td><td>Smooth philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000175<a name=\"hpo-HP.580000175\"> </a></td><td>Cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001611<a name=\"hpo-HP.580001611\"> </a></td><td>Nasal speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0002099<a name=\"hpo-HP.580002099\"> </a></td><td>Asthma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001397<a name=\"hpo-HP.580001397\"> </a></td><td>Hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001081<a name=\"hpo-HP.580001081\"> </a></td><td>Cholelithiasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002650<a name=\"hpo-HP.580002650\"> </a></td><td>Scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001212<a name=\"hpo-HP.580001212\"> </a></td><td>Prominent fingertip pads</td></tr><tr><td style=\"white-space:nowrap\">HP:0001328<a name=\"hpo-HP.580001328\"> </a></td><td>Specific learning disability</td></tr><tr><td style=\"white-space:nowrap\">HP:0000824<a name=\"hpo-HP.580000824\"> </a></td><td>Growth hormone deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002607<a name=\"hpo-HP.580002607\"> </a></td><td>Bowel incontinence</td></tr><tr><td style=\"white-space:nowrap\">HP:0100731<a name=\"hpo-HP.580100731\"> </a></td><td>Transverse facial cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0000528<a name=\"hpo-HP.580000528\"> </a></td><td>Anophthalmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000601<a name=\"hpo-HP.580000601\"> </a></td><td>Hypotelorism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000369<a name=\"hpo-HP.580000369\"> </a></td><td>Low-set ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001274<a name=\"hpo-HP.580001274\"> </a></td><td>Agenesis of corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002084<a name=\"hpo-HP.580002084\"> </a></td><td>Encephalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0007033<a name=\"hpo-HP.580007033\"> </a></td><td>Cerebellar dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100336<a name=\"hpo-HP.580100336\"> </a></td><td>Bilateral cleft lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0100337<a name=\"hpo-HP.580100337\"> </a></td><td>Bilateral cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001511<a name=\"hpo-HP.580001511\"> </a></td><td>Intrauterine growth retardation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011451<a name=\"hpo-HP.580011451\"> </a></td><td>Congenital microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000324<a name=\"hpo-HP.580000324\"> </a></td><td>Facial asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0000581<a name=\"hpo-HP.580000581\"> </a></td><td>Blepharophimosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000508<a name=\"hpo-HP.580000508\"> </a></td><td>Ptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008551<a name=\"hpo-HP.580008551\"> </a></td><td>Microtia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001631<a name=\"hpo-HP.580001631\"> </a></td><td>Atrial septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0000085<a name=\"hpo-HP.580000085\"> </a></td><td>Horseshoe kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0011927<a name=\"hpo-HP.580011927\"> </a></td><td>Short digit</td></tr><tr><td style=\"white-space:nowrap\">HP:0001156<a name=\"hpo-HP.580001156\"> </a></td><td>Brachydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002066<a name=\"hpo-HP.580002066\"> </a></td><td>Gait ataxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001250<a name=\"hpo-HP.580001250\"> </a></td><td>Seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001263<a name=\"hpo-HP.580001263\"> </a></td><td>Global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0001562<a name=\"hpo-HP.580001562\"> </a></td><td>Oligohydramnios</td></tr><tr><td style=\"white-space:nowrap\">HP:0001195<a name=\"hpo-HP.580001195\"> </a></td><td>Single umbilical artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0006349<a name=\"hpo-HP.580006349\"> </a></td><td>Agenesis of permanent teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000668<a name=\"hpo-HP.580000668\"> </a></td><td>Hypodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000677<a name=\"hpo-HP.580000677\"> </a></td><td>Oligodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001252<a name=\"hpo-HP.580001252\"> </a></td><td>Muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003429<a name=\"hpo-HP.580003429\"> </a></td><td>CNS hypomyelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0010864<a name=\"hpo-HP.580010864\"> </a></td><td>Intellectual disability, severe</td></tr><tr><td style=\"white-space:nowrap\">HP:0004325<a name=\"hpo-HP.580004325\"> </a></td><td>Decreased body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000666<a name=\"hpo-HP.580000666\"> </a></td><td>Horizontal nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000218<a name=\"hpo-HP.580000218\"> </a></td><td>High palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0010809<a name=\"hpo-HP.580010809\"> </a></td><td>Broad uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000767<a name=\"hpo-HP.580000767\"> </a></td><td>Pectus excavatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0003691<a name=\"hpo-HP.580003691\"> </a></td><td>Scapular winging</td></tr><tr><td style=\"white-space:nowrap\">HP:0002616<a name=\"hpo-HP.580002616\"> </a></td><td>Aortic root aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0001601<a name=\"hpo-HP.580001601\"> </a></td><td>Laryngomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002021<a name=\"hpo-HP.580002021\"> </a></td><td>Pyloric stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001388<a name=\"hpo-HP.580001388\"> </a></td><td>Joint laxity</td></tr><tr><td style=\"white-space:nowrap\">HP:0001187<a name=\"hpo-HP.580001187\"> </a></td><td>Hyperextensibility of the finger joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0000741<a name=\"hpo-HP.580000741\"> </a></td><td>Apathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000817<a name=\"hpo-HP.580000817\"> </a></td><td>Poor eye contact</td></tr><tr><td style=\"white-space:nowrap\">HP:0000821<a name=\"hpo-HP.580000821\"> </a></td><td>Hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000002<a name=\"hpo-HP.580000002\"> </a></td><td>Abnormality of body height</td></tr><tr><td style=\"white-space:nowrap\">HP:0000079<a name=\"hpo-HP.580000079\"> </a></td><td>Abnormality of the urinary system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000164<a name=\"hpo-HP.580000164\"> </a></td><td>Abnormality of the dentition</td></tr><tr><td style=\"white-space:nowrap\">HP:0000364<a name=\"hpo-HP.580000364\"> </a></td><td>Hearing abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000366<a name=\"hpo-HP.580000366\"> </a></td><td>Abnormality of the nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0000464<a name=\"hpo-HP.580000464\"> </a></td><td>Abnormality of the neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000707<a name=\"hpo-HP.580000707\"> </a></td><td>Abnormality of the nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000708<a name=\"hpo-HP.580000708\"> </a></td><td>Behavioral abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000769<a name=\"hpo-HP.580000769\"> </a></td><td>Abnormality of the breast</td></tr><tr><td style=\"white-space:nowrap\">HP:0000772<a name=\"hpo-HP.580000772\"> </a></td><td>Abnormality of the ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000775<a name=\"hpo-HP.580000775\"> </a></td><td>Abnormality of the diaphragm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000889<a name=\"hpo-HP.580000889\"> </a></td><td>Abnormality of the clavicle</td></tr><tr><td style=\"white-space:nowrap\">HP:0000925<a name=\"hpo-HP.580000925\"> </a></td><td>Abnormality of the vertebral column</td></tr><tr><td style=\"white-space:nowrap\">HP:0001080<a name=\"hpo-HP.580001080\"> </a></td><td>Biliary tract abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001392<a name=\"hpo-HP.580001392\"> </a></td><td>Abnormality of the liver</td></tr><tr><td style=\"white-space:nowrap\">HP:0001438<a name=\"hpo-HP.580001438\"> </a></td><td>Abnormal abdomen morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001608<a name=\"hpo-HP.580001608\"> </a></td><td>Abnormality of the voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001627<a name=\"hpo-HP.580001627\"> </a></td><td>Abnormal heart morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001732<a name=\"hpo-HP.580001732\"> </a></td><td>Abnormality of the pancreas</td></tr><tr><td style=\"white-space:nowrap\">HP:0001739<a name=\"hpo-HP.580001739\"> </a></td><td>Abnormality of the nasopharynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0001743<a name=\"hpo-HP.580001743\"> </a></td><td>Abnormality of the spleen</td></tr><tr><td style=\"white-space:nowrap\">HP:0001760<a name=\"hpo-HP.580001760\"> </a></td><td>Abnormal foot morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001871<a name=\"hpo-HP.580001871\"> </a></td><td>Abnormality of blood and blood-forming tissues</td></tr><tr><td style=\"white-space:nowrap\">HP:0002031<a name=\"hpo-HP.580002031\"> </a></td><td>Abnormal esophagus morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002244<a name=\"hpo-HP.580002244\"> </a></td><td>Abnormality of the small intestine</td></tr><tr><td style=\"white-space:nowrap\">HP:0002246<a name=\"hpo-HP.580002246\"> </a></td><td>Abnormality of the duodenum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002250<a name=\"hpo-HP.580002250\"> </a></td><td>Abnormal large intestine morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002644<a name=\"hpo-HP.580002644\"> </a></td><td>Abnormality of pelvic girdle bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002664<a name=\"hpo-HP.580002664\"> </a></td><td>Neoplasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0002715<a name=\"hpo-HP.580002715\"> </a></td><td>Abnormality of the immune system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002814<a name=\"hpo-HP.580002814\"> </a></td><td>Abnormality of the lower limb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002817<a name=\"hpo-HP.580002817\"> </a></td><td>Abnormality of the upper limb</td></tr><tr><td style=\"white-space:nowrap\">HP:0005483<a name=\"hpo-HP.580005483\"> </a></td><td>Abnormal epiglottis morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008777<a name=\"hpo-HP.580008777\"> </a></td><td>Abnormal vocal cord morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011844<a name=\"hpo-HP.580011844\"> </a></td><td>Abnormal appendicular skeleton morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012732<a name=\"hpo-HP.580012732\"> </a></td><td>Anorectal anomaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001508<a name=\"hpo-HP.580001508\"> </a></td><td>Failure to thrive</td></tr><tr><td style=\"white-space:nowrap\">HP:0002902<a name=\"hpo-HP.580002902\"> </a></td><td>Hyponatremia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012236<a name=\"hpo-HP.580012236\"> </a></td><td>Elevated sweat chloride</td></tr><tr><td style=\"white-space:nowrap\">HP:0000347<a name=\"hpo-HP.580000347\"> </a></td><td>Micrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000926<a name=\"hpo-HP.580000926\"> </a></td><td>Platyspondyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001371<a name=\"hpo-HP.580001371\"> </a></td><td>Flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0001875<a name=\"hpo-HP.580001875\"> </a></td><td>Neutropenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001888<a name=\"hpo-HP.580001888\"> </a></td><td>Lymphopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002857<a name=\"hpo-HP.580002857\"> </a></td><td>Genu valgum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002986<a name=\"hpo-HP.580002986\"> </a></td><td>Radial bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003015<a name=\"hpo-HP.580003015\"> </a></td><td>Flared metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003025<a name=\"hpo-HP.580003025\"> </a></td><td>Metaphyseal irregularity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003097<a name=\"hpo-HP.580003097\"> </a></td><td>Short femur</td></tr><tr><td style=\"white-space:nowrap\">HP:0003300<a name=\"hpo-HP.580003300\"> </a></td><td>Ovoid vertebral bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0003307<a name=\"hpo-HP.580003307\"> </a></td><td>Hyperlordosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004209<a name=\"hpo-HP.580004209\"> </a></td><td>Clinodactyly of the 5th finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0004322<a name=\"hpo-HP.580004322\"> </a></td><td>Short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0005792<a name=\"hpo-HP.580005792\"> </a></td><td>Short humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0006248<a name=\"hpo-HP.580006248\"> </a></td><td>Limited wrist movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0000944<a name=\"hpo-HP.580000944\"> </a></td><td>Abnormality of the metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011921<a name=\"hpo-HP.580011921\"> </a></td><td>Exudative pleural effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0003043<a name=\"hpo-HP.580003043\"> </a></td><td>Abnormality of the shoulder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000290<a name=\"hpo-HP.580000290\"> </a></td><td>Abnormality of the forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0005288<a name=\"hpo-HP.580005288\"> </a></td><td>Abnormality of the nares</td></tr><tr><td style=\"white-space:nowrap\">HP:0000234<a name=\"hpo-HP.580000234\"> </a></td><td>Abnormality of the head</td></tr><tr><td style=\"white-space:nowrap\">HP:0004323<a name=\"hpo-HP.580004323\"> </a></td><td>Abnormality of body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000483<a name=\"hpo-HP.580000483\"> </a></td><td>Astigmatism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011003<a name=\"hpo-HP.580011003\"> </a></td><td>High myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000470<a name=\"hpo-HP.580000470\"> </a></td><td>Short neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0030044<a name=\"hpo-HP.580030044\"> </a></td><td>Flexion contracture of digit</td></tr><tr><td style=\"white-space:nowrap\">HP:0100871<a name=\"hpo-HP.580100871\"> </a></td><td>Abnormality of the palm</td></tr><tr><td style=\"white-space:nowrap\">HP:0004334<a name=\"hpo-HP.580004334\"> </a></td><td>Dermal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001845<a name=\"hpo-HP.580001845\"> </a></td><td>Overlapping toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000496<a name=\"hpo-HP.580000496\"> </a></td><td>Abnormality of eye movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0001780<a name=\"hpo-HP.580001780\"> </a></td><td>Abnormality of toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001626<a name=\"hpo-HP.580001626\"> </a></td><td>Abnormality of the cardiovascular system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002086<a name=\"hpo-HP.580002086\"> </a></td><td>Abnormality of the respiratory system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000818<a name=\"hpo-HP.580000818\"> </a></td><td>Abnormality of the endocrine system</td></tr><tr><td style=\"white-space:nowrap\">HP:0012372<a name=\"hpo-HP.580012372\"> </a></td><td>Abnormal eye morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009473<a name=\"hpo-HP.580009473\"> </a></td><td>Joint contracture of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0003199<a name=\"hpo-HP.580003199\"> </a></td><td>Decreased muscle mass</td></tr><tr><td style=\"white-space:nowrap\">HP:0003202<a name=\"hpo-HP.580003202\"> </a></td><td>Skeletal muscle atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003551<a name=\"hpo-HP.580003551\"> </a></td><td>Difficulty climbing stairs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002355<a name=\"hpo-HP.580002355\"> </a></td><td>Difficulty walking</td></tr><tr><td style=\"white-space:nowrap\">HP:0003546<a name=\"hpo-HP.580003546\"> </a></td><td>Exercise intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0003325<a name=\"hpo-HP.580003325\"> </a></td><td>Limb-girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003701<a name=\"hpo-HP.580003701\"> </a></td><td>Proximal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003547<a name=\"hpo-HP.580003547\"> </a></td><td>Shoulder girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0007340<a name=\"hpo-HP.580007340\"> </a></td><td>Lower limb muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002168<a name=\"hpo-HP.580002168\"> </a></td><td>Scanning speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0001265<a name=\"hpo-HP.580001265\"> </a></td><td>Hyporeflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001284<a name=\"hpo-HP.580001284\"> </a></td><td>Areflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003477<a name=\"hpo-HP.580003477\"> </a></td><td>Peripheral axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000924<a name=\"hpo-HP.580000924\"> </a></td><td>Abnormality of the skeletal system</td></tr><tr><td style=\"white-space:nowrap\">HP:0001291<a name=\"hpo-HP.580001291\"> </a></td><td>Abnormal cranial nerve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003687<a name=\"hpo-HP.580003687\"> </a></td><td>Centrally nucleated skeletal muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0001324<a name=\"hpo-HP.580001324\"> </a></td><td>Muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002515<a name=\"hpo-HP.580002515\"> </a></td><td>Waddling gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0100280<a name=\"hpo-HP.580100280\"> </a></td><td>Crohn's disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0002631<a name=\"hpo-HP.580002631\"> </a></td><td>obsolete Dilatation of ascending aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0100026<a name=\"hpo-HP.580100026\"> </a></td><td>Arteriovenous malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002637<a name=\"hpo-HP.580002637\"> </a></td><td>Cerebral ischemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002619<a name=\"hpo-HP.580002619\"> </a></td><td>Varicose veins</td></tr><tr><td style=\"white-space:nowrap\">HP:0001159<a name=\"hpo-HP.580001159\"> </a></td><td>Syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002069<a name=\"hpo-HP.580002069\"> </a></td><td>Bilateral tonic-clonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000977<a name=\"hpo-HP.580000977\"> </a></td><td>Soft skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010648<a name=\"hpo-HP.580010648\"> </a></td><td>Dermal translucency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000978<a name=\"hpo-HP.580000978\"> </a></td><td>Bruising susceptibility</td></tr><tr><td style=\"white-space:nowrap\">HP:0001956<a name=\"hpo-HP.580001956\"> </a></td><td>Truncal obesity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000189<a name=\"hpo-HP.580000189\"> </a></td><td>Narrow palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000678<a name=\"hpo-HP.580000678\"> </a></td><td>Dental crowding</td></tr><tr><td style=\"white-space:nowrap\">HP:0002870<a name=\"hpo-HP.580002870\"> </a></td><td>Obstructive sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001763<a name=\"hpo-HP.580001763\"> </a></td><td>Pes planus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000782<a name=\"hpo-HP.580000782\"> </a></td><td>Abnormality of the scapula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001600<a name=\"hpo-HP.580001600\"> </a></td><td>Abnormality of the larynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0002088<a name=\"hpo-HP.580002088\"> </a></td><td>Abnormal lung morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011407<a name=\"hpo-HP.580011407\"> </a></td><td>Proportionate tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0000541<a name=\"hpo-HP.580000541\"> </a></td><td>Retinal detachment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001373<a name=\"hpo-HP.580001373\"> </a></td><td>Joint dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000938<a name=\"hpo-HP.580000938\"> </a></td><td>Osteopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002942<a name=\"hpo-HP.580002942\"> </a></td><td>Thoracic kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001840<a name=\"hpo-HP.580001840\"> </a></td><td>Metatarsus adductus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001844<a name=\"hpo-HP.580001844\"> </a></td><td>Abnormality of the hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0001765<a name=\"hpo-HP.580001765\"> </a></td><td>Hammertoe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000606<a name=\"hpo-HP.580000606\"> </a></td><td>Abnormality of the periorbital region</td></tr><tr><td style=\"white-space:nowrap\">HP:0002757<a name=\"hpo-HP.580002757\"> </a></td><td>Recurrent fractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0000647<a name=\"hpo-HP.580000647\"> </a></td><td>Sclerocornea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001166<a name=\"hpo-HP.580001166\"> </a></td><td>Arachnodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005490<a name=\"hpo-HP.580005490\"> </a></td><td>Postnatal macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0011363<a name=\"hpo-HP.580011363\"> </a></td><td>Abnormality of hair growth rate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000276<a name=\"hpo-HP.580000276\"> </a></td><td>Long face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000275<a name=\"hpo-HP.580000275\"> </a></td><td>Narrow face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000337<a name=\"hpo-HP.580000337\"> </a></td><td>Broad forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0002267<a name=\"hpo-HP.580002267\"> </a></td><td>Exaggerated startle response</td></tr><tr><td style=\"white-space:nowrap\">HP:0002187<a name=\"hpo-HP.580002187\"> </a></td><td>Intellectual disability, profound</td></tr><tr><td style=\"white-space:nowrap\">HP:0000728<a name=\"hpo-HP.580000728\"> </a></td><td>Impaired ability to form peer relationships</td></tr><tr><td style=\"white-space:nowrap\">HP:0000733<a name=\"hpo-HP.580000733\"> </a></td><td>Stereotypy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000739<a name=\"hpo-HP.580000739\"> </a></td><td>Anxiety</td></tr><tr><td style=\"white-space:nowrap\">HP:0000929<a name=\"hpo-HP.580000929\"> </a></td><td>Abnormal skull morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001965<a name=\"hpo-HP.580001965\"> </a></td><td>Abnormal scalp morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100538<a name=\"hpo-HP.580100538\"> </a></td><td>Abnormality of the supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0000309<a name=\"hpo-HP.580000309\"> </a></td><td>Abnormality of the midface</td></tr><tr><td style=\"white-space:nowrap\">HP:0000277<a name=\"hpo-HP.580000277\"> </a></td><td>Abnormality of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000765<a name=\"hpo-HP.580000765\"> </a></td><td>Abnormality of the thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0100008<a name=\"hpo-HP.580100008\"> </a></td><td>Schwannoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0030038<a name=\"hpo-HP.580030038\"> </a></td><td>Enchondroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0100777<a name=\"hpo-HP.580100777\"> </a></td><td>Exostoses</td></tr><tr><td style=\"white-space:nowrap\">HP:0011663<a name=\"hpo-HP.580011663\"> </a></td><td>Right ventricular cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011675<a name=\"hpo-HP.580011675\"> </a></td><td>Arrhythmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001962<a name=\"hpo-HP.580001962\"> </a></td><td>Palpitations</td></tr><tr><td style=\"white-space:nowrap\">HP:0001279<a name=\"hpo-HP.580001279\"> </a></td><td>Syncope</td></tr><tr><td style=\"white-space:nowrap\">HP:0004756<a name=\"hpo-HP.580004756\"> </a></td><td>Ventricular tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000252<a name=\"hpo-HP.580000252\"> </a></td><td>Microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000303<a name=\"hpo-HP.580000303\"> </a></td><td>Mandibular prognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000664<a name=\"hpo-HP.580000664\"> </a></td><td>Synophrys</td></tr><tr><td style=\"white-space:nowrap\">HP:0001609<a name=\"hpo-HP.580001609\"> </a></td><td>Hoarse voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0002558<a name=\"hpo-HP.580002558\"> </a></td><td>Supernumerary nipple</td></tr><tr><td style=\"white-space:nowrap\">HP:0001634<a name=\"hpo-HP.580001634\"> </a></td><td>Mitral valve prolapse</td></tr><tr><td style=\"white-space:nowrap\">HP:0000028<a name=\"hpo-HP.580000028\"> </a></td><td>Cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000973<a name=\"hpo-HP.580000973\"> </a></td><td>Cutis laxa</td></tr><tr><td style=\"white-space:nowrap\">HP:0001518<a name=\"hpo-HP.580001518\"> </a></td><td>Small for gestational age</td></tr><tr><td style=\"white-space:nowrap\">HP:0000527<a name=\"hpo-HP.580000527\"> </a></td><td>Long eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002808<a name=\"hpo-HP.580002808\"> </a></td><td>Kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000248<a name=\"hpo-HP.580000248\"> </a></td><td>Brachycephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000505<a name=\"hpo-HP.580000505\"> </a></td><td>Visual impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000512<a name=\"hpo-HP.580000512\"> </a></td><td>Abnormal electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:0000517<a name=\"hpo-HP.580000517\"> </a></td><td>Abnormality of the lens</td></tr><tr><td style=\"white-space:nowrap\">HP:0000529<a name=\"hpo-HP.580000529\"> </a></td><td>Progressive visual loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0000586<a name=\"hpo-HP.580000586\"> </a></td><td>Shallow orbits</td></tr><tr><td style=\"white-space:nowrap\">HP:0000603<a name=\"hpo-HP.580000603\"> </a></td><td>Central scotoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000939<a name=\"hpo-HP.580000939\"> </a></td><td>Osteoporosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001377<a name=\"hpo-HP.580001377\"> </a></td><td>Limited elbow extension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001387<a name=\"hpo-HP.580001387\"> </a></td><td>Joint stiffness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001822<a name=\"hpo-HP.580001822\"> </a></td><td>Hallux valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0002657<a name=\"hpo-HP.580002657\"> </a></td><td>Spondylometaphyseal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003026<a name=\"hpo-HP.580003026\"> </a></td><td>Short long bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0006462<a name=\"hpo-HP.580006462\"> </a></td><td>Generalized bone demineralization</td></tr><tr><td style=\"white-space:nowrap\">HP:0008873<a name=\"hpo-HP.580008873\"> </a></td><td>Disproportionate short-limb short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0008905<a name=\"hpo-HP.580008905\"> </a></td><td>Rhizomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008922<a name=\"hpo-HP.580008922\"> </a></td><td>Childhood-onset short-trunk short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0200020<a name=\"hpo-HP.580200020\"> </a></td><td>Corneal erosion</td></tr><tr><td style=\"white-space:nowrap\">HP:0001172<a name=\"hpo-HP.580001172\"> </a></td><td>Abnormal thumb morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002286<a name=\"hpo-HP.580002286\"> </a></td><td>Fair hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0010719<a name=\"hpo-HP.580010719\"> </a></td><td>Abnormality of hair texture</td></tr><tr><td style=\"white-space:nowrap\">HP:0010720<a name=\"hpo-HP.580010720\"> </a></td><td>Abnormal hair pattern</td></tr><tr><td style=\"white-space:nowrap\">HP:0001635<a name=\"hpo-HP.580001635\"> </a></td><td>Congestive heart failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001644<a name=\"hpo-HP.580001644\"> </a></td><td>Dilated cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001663<a name=\"hpo-HP.580001663\"> </a></td><td>Ventricular fibrillation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011712<a name=\"hpo-HP.580011712\"> </a></td><td>Right bundle branch block</td></tr><tr><td style=\"white-space:nowrap\">HP:0000272<a name=\"hpo-HP.580000272\"> </a></td><td>Malar flattening</td></tr><tr><td style=\"white-space:nowrap\">HP:0000286<a name=\"hpo-HP.580000286\"> </a></td><td>Epicanthus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000322<a name=\"hpo-HP.580000322\"> </a></td><td>Short philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000463<a name=\"hpo-HP.580000463\"> </a></td><td>Anteverted nares</td></tr><tr><td style=\"white-space:nowrap\">HP:0000494<a name=\"hpo-HP.580000494\"> </a></td><td>Downslanted palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0000543<a name=\"hpo-HP.580000543\"> </a></td><td>Optic disc pallor</td></tr><tr><td style=\"white-space:nowrap\">HP:0000699<a name=\"hpo-HP.580000699\"> </a></td><td>Diastema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000773<a name=\"hpo-HP.580000773\"> </a></td><td>Short ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000887<a name=\"hpo-HP.580000887\"> </a></td><td>Cupped ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000946<a name=\"hpo-HP.580000946\"> </a></td><td>Hypoplastic ilia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000954<a name=\"hpo-HP.580000954\"> </a></td><td>Single transverse palmar crease</td></tr><tr><td style=\"white-space:nowrap\">HP:0001182<a name=\"hpo-HP.580001182\"> </a></td><td>Tapered finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0001537<a name=\"hpo-HP.580001537\"> </a></td><td>Umbilical hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002007<a name=\"hpo-HP.580002007\"> </a></td><td>Frontal bossing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002980<a name=\"hpo-HP.580002980\"> </a></td><td>Femoral bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002982<a name=\"hpo-HP.580002982\"> </a></td><td>Tibial bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003021<a name=\"hpo-HP.580003021\"> </a></td><td>Metaphyseal cupping</td></tr><tr><td style=\"white-space:nowrap\">HP:0005011<a name=\"hpo-HP.580005011\"> </a></td><td>Mesomelic arm shortening</td></tr><tr><td style=\"white-space:nowrap\">HP:0008803<a name=\"hpo-HP.580008803\"> </a></td><td>obsolete Narrow sacroiliac notch</td></tr><tr><td style=\"white-space:nowrap\">HP:0009117<a name=\"hpo-HP.580009117\"> </a></td><td>Aplasia/Hypoplasia of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0011220<a name=\"hpo-HP.580011220\"> </a></td><td>Prominent forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0012801<a name=\"hpo-HP.580012801\"> </a></td><td>Narrow jaw</td></tr><tr><td style=\"white-space:nowrap\">HP:0000243<a name=\"hpo-HP.580000243\"> </a></td><td>Trigonocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000358<a name=\"hpo-HP.580000358\"> </a></td><td>Posteriorly rotated ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0000411<a name=\"hpo-HP.580000411\"> </a></td><td>Protruding ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000646<a name=\"hpo-HP.580000646\"> </a></td><td>Amblyopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002812<a name=\"hpo-HP.580002812\"> </a></td><td>Coxa vara</td></tr><tr><td style=\"white-space:nowrap\">HP:0002970<a name=\"hpo-HP.580002970\"> </a></td><td>Genu varum</td></tr><tr><td style=\"white-space:nowrap\">HP:0012775<a name=\"hpo-HP.580012775\"> </a></td><td>Stellate iris</td></tr><tr><td style=\"white-space:nowrap\">HP:0000278<a name=\"hpo-HP.580000278\"> </a></td><td>Retrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0009796<a name=\"hpo-HP.580009796\"> </a></td><td>Branchial cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0002474<a name=\"hpo-HP.580002474\"> </a></td><td>Expressive language delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0007018<a name=\"hpo-HP.580007018\"> </a></td><td>Attention deficit hyperactivity disorder</td></tr><tr><td style=\"white-space:nowrap\">HP:0003198<a name=\"hpo-HP.580003198\"> </a></td><td>Myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003324<a name=\"hpo-HP.580003324\"> </a></td><td>Generalized muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003552<a name=\"hpo-HP.580003552\"> </a></td><td>Muscle stiffness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003554<a name=\"hpo-HP.580003554\"> </a></td><td>Type 2 muscle fiber atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003557<a name=\"hpo-HP.580003557\"> </a></td><td>Increased variability in muscle fiber diameter</td></tr><tr><td style=\"white-space:nowrap\">HP:0009025<a name=\"hpo-HP.580009025\"> </a></td><td>Increased connective tissue</td></tr><tr><td style=\"white-space:nowrap\">HP:0003635<a name=\"hpo-HP.580003635\"> </a></td><td>Loss of subcutaneous adipose tissue in limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002597<a name=\"hpo-HP.580002597\"> </a></td><td>Abnormality of the vasculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0001649<a name=\"hpo-HP.580001649\"> </a></td><td>Tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001638<a name=\"hpo-HP.580001638\"> </a></td><td>Cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001654<a name=\"hpo-HP.580001654\"> </a></td><td>Abnormal heart valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001671<a name=\"hpo-HP.580001671\"> </a></td><td>Abnormal cardiac septum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000103<a name=\"hpo-HP.580000103\"> </a></td><td>Polyuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0000114<a name=\"hpo-HP.580000114\"> </a></td><td>Proximal tubulopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001878<a name=\"hpo-HP.580001878\"> </a></td><td>Hemolytic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001931<a name=\"hpo-HP.580001931\"> </a></td><td>Hypochromic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001935<a name=\"hpo-HP.580001935\"> </a></td><td>Microcytic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001959<a name=\"hpo-HP.580001959\"> </a></td><td>Polydipsia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001994<a name=\"hpo-HP.580001994\"> </a></td><td>Renal Fanconi syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002134<a name=\"hpo-HP.580002134\"> </a></td><td>Abnormality of the basal ganglia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002188<a name=\"hpo-HP.580002188\"> </a></td><td>Delayed CNS myelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0002908<a name=\"hpo-HP.580002908\"> </a></td><td>Conjugated hyperbilirubinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003774<a name=\"hpo-HP.580003774\"> </a></td><td>Stage 5 chronic kidney disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0010700<a name=\"hpo-HP.580010700\"> </a></td><td>obsolete Total cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000193<a name=\"hpo-HP.580000193\"> </a></td><td>Bifid uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000219<a name=\"hpo-HP.580000219\"> </a></td><td>Thin upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000426<a name=\"hpo-HP.580000426\"> </a></td><td>Prominent nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000452<a name=\"hpo-HP.580000452\"> </a></td><td>Choanal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000490<a name=\"hpo-HP.580000490\"> </a></td><td>Deeply set eye</td></tr><tr><td style=\"white-space:nowrap\">HP:0000540<a name=\"hpo-HP.580000540\"> </a></td><td>Hypermetropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000579<a name=\"hpo-HP.580000579\"> </a></td><td>Nasolacrimal duct obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0000684<a name=\"hpo-HP.580000684\"> </a></td><td>Delayed eruption of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000960<a name=\"hpo-HP.580000960\"> </a></td><td>Sacral dimple</td></tr><tr><td style=\"white-space:nowrap\">HP:0000998<a name=\"hpo-HP.580000998\"> </a></td><td>Hypertrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001643<a name=\"hpo-HP.580001643\"> </a></td><td>Patent ductus arteriosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010813<a name=\"hpo-HP.580010813\"> </a></td><td>Abnormal number of hair whorls</td></tr><tr><td style=\"white-space:nowrap\">HP:0012384<a name=\"hpo-HP.580012384\"> </a></td><td>Rhinitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012745<a name=\"hpo-HP.580012745\"> </a></td><td>Short palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000359<a name=\"hpo-HP.580000359\"> </a></td><td>Abnormality of the inner ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000429<a name=\"hpo-HP.580000429\"> </a></td><td>Abnormality of the nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000436<a name=\"hpo-HP.580000436\"> </a></td><td>Abnormality of the nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000499<a name=\"hpo-HP.580000499\"> </a></td><td>Abnormal eyelash morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000534<a name=\"hpo-HP.580000534\"> </a></td><td>Abnormal eyebrow morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000951<a name=\"hpo-HP.580000951\"> </a></td><td>Abnormality of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001000<a name=\"hpo-HP.580001000\"> </a></td><td>Abnormality of skin pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001597<a name=\"hpo-HP.580001597\"> </a></td><td>Abnormality of the nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0006483<a name=\"hpo-HP.580006483\"> </a></td><td>Abnormal number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009929<a name=\"hpo-HP.580009929\"> </a></td><td>Abnormality of the columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0011119<a name=\"hpo-HP.580011119\"> </a></td><td>Abnormality of the nasal dorsum</td></tr><tr><td style=\"white-space:nowrap\">HP:0012808<a name=\"hpo-HP.580012808\"> </a></td><td>Abnormal nasal base</td></tr><tr><td style=\"white-space:nowrap\">HP:0100490<a name=\"hpo-HP.580100490\"> </a></td><td>Camptodactyly of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0000964<a name=\"hpo-HP.580000964\"> </a></td><td>Eczema</td></tr><tr><td style=\"white-space:nowrap\">HP:0004442<a name=\"hpo-HP.580004442\"> </a></td><td>Sagittal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000414<a name=\"hpo-HP.580000414\"> </a></td><td>Bulbous nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0003180<a name=\"hpo-HP.580003180\"> </a></td><td>Flat acetabular roof</td></tr><tr><td style=\"white-space:nowrap\">HP:0000422<a name=\"hpo-HP.580000422\"> </a></td><td>Abnormality of the nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000614<a name=\"hpo-HP.580000614\"> </a></td><td>Abnormal nasolacrimal system morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001167<a name=\"hpo-HP.580001167\"> </a></td><td>Abnormality of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0001595<a name=\"hpo-HP.580001595\"> </a></td><td>Abnormal hair morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012373<a name=\"hpo-HP.580012373\"> </a></td><td>Abnormal eye physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001655<a name=\"hpo-HP.580001655\"> </a></td><td>Patent foramen ovale</td></tr><tr><td style=\"white-space:nowrap\">HP:0001647<a name=\"hpo-HP.580001647\"> </a></td><td>Bicuspid aortic valve</td></tr><tr><td style=\"white-space:nowrap\">HP:0000574<a name=\"hpo-HP.580000574\"> </a></td><td>Thick eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0001169<a name=\"hpo-HP.580001169\"> </a></td><td>Broad palm</td></tr><tr><td style=\"white-space:nowrap\">HP:0006471<a name=\"hpo-HP.580006471\"> </a></td><td>Fixed elbow flexion</td></tr><tr><td style=\"white-space:nowrap\">HP:0008689<a name=\"hpo-HP.580008689\"> </a></td><td>Bilateral cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011304<a name=\"hpo-HP.580011304\"> </a></td><td>Broad thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0005110<a name=\"hpo-HP.580005110\"> </a></td><td>Atrial fibrillation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001633<a name=\"hpo-HP.580001633\"> </a></td><td>Abnormal mitral valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001641<a name=\"hpo-HP.580001641\"> </a></td><td>Abnormal pulmonary valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001702<a name=\"hpo-HP.580001702\"> </a></td><td>Abnormal tricuspid valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000012<a name=\"hpo-HP.580000012\"> </a></td><td>Urinary urgency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000020<a name=\"hpo-HP.580000020\"> </a></td><td>Urinary incontinence</td></tr><tr><td style=\"white-space:nowrap\">HP:0000131<a name=\"hpo-HP.580000131\"> </a></td><td>Uterine leiomyoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000132<a name=\"hpo-HP.580000132\"> </a></td><td>Menorrhagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000138<a name=\"hpo-HP.580000138\"> </a></td><td>Ovarian cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0000853<a name=\"hpo-HP.580000853\"> </a></td><td>Goiter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000953<a name=\"hpo-HP.580000953\"> </a></td><td>Hyperpigmentation of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001061<a name=\"hpo-HP.580001061\"> </a></td><td>Acne</td></tr><tr><td style=\"white-space:nowrap\">HP:0002315<a name=\"hpo-HP.580002315\"> </a></td><td>Headache</td></tr><tr><td style=\"white-space:nowrap\">HP:0004324<a name=\"hpo-HP.580004324\"> </a></td><td>Increased body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000069<a name=\"hpo-HP.580000069\"> </a></td><td>Abnormality of the ureter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000077<a name=\"hpo-HP.580000077\"> </a></td><td>Abnormality of the kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0000759<a name=\"hpo-HP.580000759\"> </a></td><td>Abnormal peripheral nervous system morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008069<a name=\"hpo-HP.580008069\"> </a></td><td>Neoplasm of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011276<a name=\"hpo-HP.580011276\"> </a></td><td>Vascular skin abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000705<a name=\"hpo-HP.580000705\"> </a></td><td>Amelogenesis imperfecta</td></tr><tr><td style=\"white-space:nowrap\">HP:0001256<a name=\"hpo-HP.580001256\"> </a></td><td>Intellectual disability, mild</td></tr><tr><td style=\"white-space:nowrap\">HP:0000325<a name=\"hpo-HP.580000325\"> </a></td><td>Triangular face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000160<a name=\"hpo-HP.580000160\"> </a></td><td>Narrow mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009487<a name=\"hpo-HP.580009487\"> </a></td><td>Ulnar deviation of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0001249<a name=\"hpo-HP.580001249\"> </a></td><td>Intellectual disability</td></tr><tr><td style=\"white-space:nowrap\">HP:0008064<a name=\"hpo-HP.580008064\"> </a></td><td>Ichthyosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000311<a name=\"hpo-HP.580000311\"> </a></td><td>Round face</td></tr><tr><td style=\"white-space:nowrap\">HP:0001653<a name=\"hpo-HP.580001653\"> </a></td><td>Mitral regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001771<a name=\"hpo-HP.580001771\"> </a></td><td>Achilles tendon contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0012032<a name=\"hpo-HP.580012032\"> </a></td><td>Lipoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0012368<a name=\"hpo-HP.580012368\"> </a></td><td>Flat face</td></tr><tr><td style=\"white-space:nowrap\">HP:0030053<a name=\"hpo-HP.580030053\"> </a></td><td>Stiff skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011124<a name=\"hpo-HP.580011124\"> </a></td><td>Abnormality of epidermal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011097<a name=\"hpo-HP.580011097\"> </a></td><td>Epileptic spasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000407<a name=\"hpo-HP.580000407\"> </a></td><td>Sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000331<a name=\"hpo-HP.580000331\"> </a></td><td>Short chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000340<a name=\"hpo-HP.580000340\"> </a></td><td>Sloping forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0000486<a name=\"hpo-HP.580000486\"> </a></td><td>Strabismus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000713<a name=\"hpo-HP.580000713\"> </a></td><td>Agitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000802<a name=\"hpo-HP.580000802\"> </a></td><td>Impotence</td></tr><tr><td style=\"white-space:nowrap\">HP:0001272<a name=\"hpo-HP.580001272\"> </a></td><td>Cerebellar atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001276<a name=\"hpo-HP.580001276\"> </a></td><td>Hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001321<a name=\"hpo-HP.580001321\"> </a></td><td>Cerebellar hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001322<a name=\"hpo-HP.580001322\"> </a></td><td>obsolete Brain very small</td></tr><tr><td style=\"white-space:nowrap\">HP:0002061<a name=\"hpo-HP.580002061\"> </a></td><td>Lower limb spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002529<a name=\"hpo-HP.580002529\"> </a></td><td>Neuronal loss in central nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002540<a name=\"hpo-HP.580002540\"> </a></td><td>Inability to walk</td></tr><tr><td style=\"white-space:nowrap\">HP:0005484<a name=\"hpo-HP.580005484\"> </a></td><td>Postnatal microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0012850<a name=\"hpo-HP.580012850\"> </a></td><td>Small intestinal dysmotility</td></tr><tr><td style=\"white-space:nowrap\">HP:0000504<a name=\"hpo-HP.580000504\"> </a></td><td>Abnormality of vision</td></tr><tr><td style=\"white-space:nowrap\">HP:0002118<a name=\"hpo-HP.580002118\"> </a></td><td>Abnormality of the cerebral ventricles</td></tr><tr><td style=\"white-space:nowrap\">HP:0002363<a name=\"hpo-HP.580002363\"> </a></td><td>Abnormality of brainstem morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0010651<a name=\"hpo-HP.580010651\"> </a></td><td>Abnormal meningeal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100024<a name=\"hpo-HP.580100024\"> </a></td><td>Conspicuously happy disposition</td></tr><tr><td style=\"white-space:nowrap\">HP:0002538<a name=\"hpo-HP.580002538\"> </a></td><td>Abnormality of the cerebral cortex</td></tr><tr><td style=\"white-space:nowrap\">HP:0000054<a name=\"hpo-HP.580000054\"> </a></td><td>Micropenis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000215<a name=\"hpo-HP.580000215\"> </a></td><td>Thick upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000293<a name=\"hpo-HP.580000293\"> </a></td><td>Full cheeks</td></tr><tr><td style=\"white-space:nowrap\">HP:0000349<a name=\"hpo-HP.580000349\"> </a></td><td>Widow's peak</td></tr><tr><td style=\"white-space:nowrap\">HP:0000444<a name=\"hpo-HP.580000444\"> </a></td><td>Convex nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000506<a name=\"hpo-HP.580000506\"> </a></td><td>Telecanthus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000592<a name=\"hpo-HP.580000592\"> </a></td><td>Blue sclerae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000691<a name=\"hpo-HP.580000691\"> </a></td><td>Microdontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000698<a name=\"hpo-HP.580000698\"> </a></td><td>Conical tooth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002000<a name=\"hpo-HP.580002000\"> </a></td><td>Short columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0002097<a name=\"hpo-HP.580002097\"> </a></td><td>Emphysema</td></tr><tr><td style=\"white-space:nowrap\">HP:0002209<a name=\"hpo-HP.580002209\"> </a></td><td>Sparse scalp hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002816<a name=\"hpo-HP.580002816\"> </a></td><td>Genu recurvatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0005116<a name=\"hpo-HP.580005116\"> </a></td><td>Arterial tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0007957<a name=\"hpo-HP.580007957\"> </a></td><td>Corneal opacity</td></tr><tr><td style=\"white-space:nowrap\">HP:0008070<a name=\"hpo-HP.580008070\"> </a></td><td>Sparse hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0009623<a name=\"hpo-HP.580009623\"> </a></td><td>Proximal placement of thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0010055<a name=\"hpo-HP.580010055\"> </a></td><td>Broad hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0011318<a name=\"hpo-HP.580011318\"> </a></td><td>Bicoronal synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011968<a name=\"hpo-HP.580011968\"> </a></td><td>Feeding difficulties</td></tr><tr><td style=\"white-space:nowrap\">HP:0200067<a name=\"hpo-HP.580200067\"> </a></td><td>Recurrent spontaneous abortion</td></tr><tr><td style=\"white-space:nowrap\">HP:0011819<a name=\"hpo-HP.580011819\"> </a></td><td>Submucous cleft soft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000268<a name=\"hpo-HP.580000268\"> </a></td><td>Dolichocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0003302<a name=\"hpo-HP.580003302\"> </a></td><td>Spondylolisthesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000582<a name=\"hpo-HP.580000582\"> </a></td><td>Upslanted palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000952<a name=\"hpo-HP.580000952\"> </a></td><td>Jaundice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001298<a name=\"hpo-HP.580001298\"> </a></td><td>Encephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001396<a name=\"hpo-HP.580001396\"> </a></td><td>Cholestasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002059<a name=\"hpo-HP.580002059\"> </a></td><td>Cerebral atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002171<a name=\"hpo-HP.580002171\"> </a></td><td>Gliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002240<a name=\"hpo-HP.580002240\"> </a></td><td>Hepatomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002353<a name=\"hpo-HP.580002353\"> </a></td><td>EEG abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0002446<a name=\"hpo-HP.580002446\"> </a></td><td>Astrocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003287<a name=\"hpo-HP.580003287\"> </a></td><td>Abnormality of mitochondrial metabolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011449<a name=\"hpo-HP.580011449\"> </a></td><td>Knee clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012852<a name=\"hpo-HP.580012852\"> </a></td><td>Hepatic bridging fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100626<a name=\"hpo-HP.580100626\"> </a></td><td>Chronic hepatic failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000385<a name=\"hpo-HP.580000385\"> </a></td><td>Small earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0009748<a name=\"hpo-HP.580009748\"> </a></td><td>Large earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000157<a name=\"hpo-HP.580000157\"> </a></td><td>Abnormality of the tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0000172<a name=\"hpo-HP.580000172\"> </a></td><td>Abnormality of the uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000174<a name=\"hpo-HP.580000174\"> </a></td><td>Abnormal palate morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000306<a name=\"hpo-HP.580000306\"> </a></td><td>Abnormality of the chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0004408<a name=\"hpo-HP.580004408\"> </a></td><td>Abnormality of the sense of smell</td></tr><tr><td style=\"white-space:nowrap\">HP:0009912<a name=\"hpo-HP.580009912\"> </a></td><td>Abnormality of the tragus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000537<a name=\"hpo-HP.580000537\"> </a></td><td>Epicanthus inversus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000565<a name=\"hpo-HP.580000565\"> </a></td><td>Esotropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000752<a name=\"hpo-HP.580000752\"> </a></td><td>Hyperactivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003186<a name=\"hpo-HP.580003186\"> </a></td><td>Inverted nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0012503<a name=\"hpo-HP.580012503\"> </a></td><td>Abnormality of the pituitary gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0100710<a name=\"hpo-HP.580100710\"> </a></td><td>Impulsivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000357<a name=\"hpo-HP.580000357\"> </a></td><td>Abnormal location of ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0000820<a name=\"hpo-HP.580000820\"> </a></td><td>Abnormality of the thyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000828<a name=\"hpo-HP.580000828\"> </a></td><td>Abnormality of the parathyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000834<a name=\"hpo-HP.580000834\"> </a></td><td>Abnormality of the adrenal glands</td></tr><tr><td style=\"white-space:nowrap\">HP:0012093<a name=\"hpo-HP.580012093\"> </a></td><td>Abnormality of endocrine pancreas physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000269<a name=\"hpo-HP.580000269\"> </a></td><td>Prominent occiput</td></tr><tr><td style=\"white-space:nowrap\">HP:0000535<a name=\"hpo-HP.580000535\"> </a></td><td>Sparse and thin eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000639<a name=\"hpo-HP.580000639\"> </a></td><td>Nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000718<a name=\"hpo-HP.580000718\"> </a></td><td>Aggressive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000957<a name=\"hpo-HP.580000957\"> </a></td><td>Cafe-au-lait spot</td></tr><tr><td style=\"white-space:nowrap\">HP:0000256<a name=\"hpo-HP.580000256\"> </a></td><td>Macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000750<a name=\"hpo-HP.580000750\"> </a></td><td>Delayed speech and language development</td></tr><tr><td style=\"white-space:nowrap\">HP:0000963<a name=\"hpo-HP.580000963\"> </a></td><td>Thin skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001260<a name=\"hpo-HP.580001260\"> </a></td><td>Dysarthria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002194<a name=\"hpo-HP.580002194\"> </a></td><td>Delayed gross motor development</td></tr><tr><td style=\"white-space:nowrap\">HP:0003196<a name=\"hpo-HP.580003196\"> </a></td><td>Short nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0001155<a name=\"hpo-HP.580001155\"> </a></td><td>Abnormality of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0100022<a name=\"hpo-HP.580100022\"> </a></td><td>Abnormality of movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010862<a name=\"hpo-HP.580010862\"> </a></td><td>Delayed fine motor development</td></tr><tr><td style=\"white-space:nowrap\">HP:0000343<a name=\"hpo-HP.580000343\"> </a></td><td>Long philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000717<a name=\"hpo-HP.580000717\"> </a></td><td>Autism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001883<a name=\"hpo-HP.580001883\"> </a></td><td>Talipes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002553<a name=\"hpo-HP.580002553\"> </a></td><td>Highly arched eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0007488<a name=\"hpo-HP.580007488\"> </a></td><td>Diffuse skin atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000822<a name=\"hpo-HP.580000822\"> </a></td><td>Hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001278<a name=\"hpo-HP.580001278\"> </a></td><td>Orthostatic hypotension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001944<a name=\"hpo-HP.580001944\"> </a></td><td>Dehydration</td></tr><tr><td style=\"white-space:nowrap\">HP:0001945<a name=\"hpo-HP.580001945\"> </a></td><td>Fever</td></tr><tr><td style=\"white-space:nowrap\">HP:0002019<a name=\"hpo-HP.580002019\"> </a></td><td>Constipation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002020<a name=\"hpo-HP.580002020\"> </a></td><td>Gastroesophageal reflux</td></tr><tr><td style=\"white-space:nowrap\">HP:0002027<a name=\"hpo-HP.580002027\"> </a></td><td>Abdominal pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0002718<a name=\"hpo-HP.580002718\"> </a></td><td>Recurrent bacterial infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0002841<a name=\"hpo-HP.580002841\"> </a></td><td>Recurrent fungal infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0004395<a name=\"hpo-HP.580004395\"> </a></td><td>Malnutrition</td></tr><tr><td style=\"white-space:nowrap\">HP:0009830<a name=\"hpo-HP.580009830\"> </a></td><td>Peripheral neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000126<a name=\"hpo-HP.580000126\"> </a></td><td>Hydronephrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000519<a name=\"hpo-HP.580000519\"> </a></td><td>Developmental cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000648<a name=\"hpo-HP.580000648\"> </a></td><td>Optic atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001053<a name=\"hpo-HP.580001053\"> </a></td><td>Hypopigmented skin patches</td></tr><tr><td style=\"white-space:nowrap\">HP:0001087<a name=\"hpo-HP.580001087\"> </a></td><td>Developmental glaucoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0002119<a name=\"hpo-HP.580002119\"> </a></td><td>Ventriculomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002280<a name=\"hpo-HP.580002280\"> </a></td><td>Enlarged cisterna magna</td></tr><tr><td style=\"white-space:nowrap\">HP:0003298<a name=\"hpo-HP.580003298\"> </a></td><td>Spina bifida occulta</td></tr><tr><td style=\"white-space:nowrap\">HP:0004467<a name=\"hpo-HP.580004467\"> </a></td><td>Preauricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0008511<a name=\"hpo-HP.580008511\"> </a></td><td>Central posterior corneal opacity</td></tr><tr><td style=\"white-space:nowrap\">HP:0010780<a name=\"hpo-HP.580010780\"> </a></td><td>Hyperacusis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030048<a name=\"hpo-HP.580030048\"> </a></td><td>Colpocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0100335<a name=\"hpo-HP.580100335\"> </a></td><td>Non-midline cleft lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000525<a name=\"hpo-HP.580000525\"> </a></td><td>Abnormality iris morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002719<a name=\"hpo-HP.580002719\"> </a></td><td>Recurrent infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0000153<a name=\"hpo-HP.580000153\"> </a></td><td>Abnormality of the mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001903<a name=\"hpo-HP.580001903\"> </a></td><td>Anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002094<a name=\"hpo-HP.580002094\"> </a></td><td>Dyspnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002206<a name=\"hpo-HP.580002206\"> </a></td><td>Pulmonary fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002789<a name=\"hpo-HP.580002789\"> </a></td><td>Tachypnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002793<a name=\"hpo-HP.580002793\"> </a></td><td>Abnormal pattern of respiration</td></tr><tr><td style=\"white-space:nowrap\">HP:0003565<a name=\"hpo-HP.580003565\"> </a></td><td>Elevated erythrocyte sedimentation rate</td></tr><tr><td style=\"white-space:nowrap\">HP:0006517<a name=\"hpo-HP.580006517\"> </a></td><td>Intraalveolar phospholipid accumulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0006530<a name=\"hpo-HP.580006530\"> </a></td><td>Interstitial pulmonary abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0100759<a name=\"hpo-HP.580100759\"> </a></td><td>Clubbing of fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0002103<a name=\"hpo-HP.580002103\"> </a></td><td>Abnormal pleura morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001596<a name=\"hpo-HP.580001596\"> </a></td><td>Alopecia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001882<a name=\"hpo-HP.580001882\"> </a></td><td>Leukopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002013<a name=\"hpo-HP.580002013\"> </a></td><td>Vomiting</td></tr><tr><td style=\"white-space:nowrap\">HP:0002028<a name=\"hpo-HP.580002028\"> </a></td><td>Chronic diarrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002573<a name=\"hpo-HP.580002573\"> </a></td><td>Hematochezia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002960<a name=\"hpo-HP.580002960\"> </a></td><td>Autoimmunity</td></tr><tr><td style=\"white-space:nowrap\">HP:0005387<a name=\"hpo-HP.580005387\"> </a></td><td>Combined immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0011109<a name=\"hpo-HP.580011109\"> </a></td><td>Chronic sinusitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004429<a name=\"hpo-HP.580004429\"> </a></td><td>Recurrent viral infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0000280<a name=\"hpo-HP.580000280\"> </a></td><td>Coarse facial features</td></tr><tr><td style=\"white-space:nowrap\">HP:0000294<a name=\"hpo-HP.580000294\"> </a></td><td>Low anterior hairline</td></tr><tr><td style=\"white-space:nowrap\">HP:0000577<a name=\"hpo-HP.580000577\"> </a></td><td>Exotropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001873<a name=\"hpo-HP.580001873\"> </a></td><td>Thrombocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002011<a name=\"hpo-HP.580002011\"> </a></td><td>Morphological central nervous system abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0006610<a name=\"hpo-HP.580006610\"> </a></td><td>Wide intermamillary distance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011231<a name=\"hpo-HP.580011231\"> </a></td><td>Prominent eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0012718<a name=\"hpo-HP.580012718\"> </a></td><td>Morphological abnormality of the gastrointestinal tract</td></tr><tr><td style=\"white-space:nowrap\">HP:0002024<a name=\"hpo-HP.580002024\"> </a></td><td>Malabsorption</td></tr><tr><td style=\"white-space:nowrap\">HP:0001394<a name=\"hpo-HP.580001394\"> </a></td><td>Cirrhosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001414<a name=\"hpo-HP.580001414\"> </a></td><td>Microvesicular hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001403<a name=\"hpo-HP.580001403\"> </a></td><td>Macrovesicular hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001410<a name=\"hpo-HP.580001410\"> </a></td><td>Decreased liver function</td></tr><tr><td style=\"white-space:nowrap\">HP:0001409<a name=\"hpo-HP.580001409\"> </a></td><td>Portal hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001744<a name=\"hpo-HP.580001744\"> </a></td><td>Splenomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0003394<a name=\"hpo-HP.580003394\"> </a></td><td>Muscle spasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003750<a name=\"hpo-HP.580003750\"> </a></td><td>Increased muscle fatiguability</td></tr><tr><td style=\"white-space:nowrap\">HP:0002123<a name=\"hpo-HP.580002123\"> </a></td><td>Generalized myoclonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0002219<a name=\"hpo-HP.580002219\"> </a></td><td>Facial hypertrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000831<a name=\"hpo-HP.580000831\"> </a></td><td>Insulin-resistant diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001891<a name=\"hpo-HP.580001891\"> </a></td><td>Iron deficiency anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001264<a name=\"hpo-HP.580001264\"> </a></td><td>Spastic diplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002313<a name=\"hpo-HP.580002313\"> </a></td><td>Spastic paraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001347<a name=\"hpo-HP.580001347\"> </a></td><td>Hyperreflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002460<a name=\"hpo-HP.580002460\"> </a></td><td>Distal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000763<a name=\"hpo-HP.580000763\"> </a></td><td>Sensory neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001268<a name=\"hpo-HP.580001268\"> </a></td><td>Mental deterioration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002169<a name=\"hpo-HP.580002169\"> </a></td><td>Clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001332<a name=\"hpo-HP.580001332\"> </a></td><td>Dystonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100716<a name=\"hpo-HP.580100716\"> </a></td><td>Self-injurious behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000602<a name=\"hpo-HP.580000602\"> </a></td><td>Ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001251<a name=\"hpo-HP.580001251\"> </a></td><td>Ataxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000776<a name=\"hpo-HP.580000776\"> </a></td><td>Congenital diaphragmatic hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000410<a name=\"hpo-HP.580000410\"> </a></td><td>Mixed hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000510<a name=\"hpo-HP.580000510\"> </a></td><td>Rod-cone dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0004437<a name=\"hpo-HP.580004437\"> </a></td><td>Cranial hyperostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011001<a name=\"hpo-HP.580011001\"> </a></td><td>Increased bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0000956<a name=\"hpo-HP.580000956\"> </a></td><td>Acanthosis nigricans</td></tr><tr><td style=\"white-space:nowrap\">HP:0000958<a name=\"hpo-HP.580000958\"> </a></td><td>Dry skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000580<a name=\"hpo-HP.580000580\"> </a></td><td>Pigmentary retinopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000649<a name=\"hpo-HP.580000649\"> </a></td><td>Abnormality of visual evoked potentials</td></tr><tr><td style=\"white-space:nowrap\">HP:0000657<a name=\"hpo-HP.580000657\"> </a></td><td>Oculomotor apraxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000479<a name=\"hpo-HP.580000479\"> </a></td><td>Abnormal retinal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001317<a name=\"hpo-HP.580001317\"> </a></td><td>Abnormal cerebellum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001533<a name=\"hpo-HP.580001533\"> </a></td><td>Slender build</td></tr><tr><td style=\"white-space:nowrap\">HP:0001629<a name=\"hpo-HP.580001629\"> </a></td><td>Ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0000703<a name=\"hpo-HP.580000703\"> </a></td><td>Dentinogenesis imperfecta</td></tr><tr><td style=\"white-space:nowrap\">HP:0000914<a name=\"hpo-HP.580000914\"> </a></td><td>Shield chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0001500<a name=\"hpo-HP.580001500\"> </a></td><td>Broad finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0003086<a name=\"hpo-HP.580003086\"> </a></td><td>Acromesomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003416<a name=\"hpo-HP.580003416\"> </a></td><td>Spinal canal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002815<a name=\"hpo-HP.580002815\"> </a></td><td>Abnormality of the knee</td></tr><tr><td style=\"white-space:nowrap\">HP:0002992<a name=\"hpo-HP.580002992\"> </a></td><td>Abnormality of tibia morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001639<a name=\"hpo-HP.580001639\"> </a></td><td>Hypertrophic cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003236<a name=\"hpo-HP.580003236\"> </a></td><td>Elevated serum creatine kinase</td></tr><tr><td style=\"white-space:nowrap\">HP:0001369<a name=\"hpo-HP.580001369\"> </a></td><td>Arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003560<a name=\"hpo-HP.580003560\"> </a></td><td>Muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003974<a name=\"hpo-HP.580003974\"> </a></td><td>Absent radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0002818<a name=\"hpo-HP.580002818\"> </a></td><td>Abnormality of the radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0001561<a name=\"hpo-HP.580001561\"> </a></td><td>Polyhydramnios</td></tr><tr><td style=\"white-space:nowrap\">HP:0002299<a name=\"hpo-HP.580002299\"> </a></td><td>Brittle hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002208<a name=\"hpo-HP.580002208\"> </a></td><td>Coarse hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002213<a name=\"hpo-HP.580002213\"> </a></td><td>Fine hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000522<a name=\"hpo-HP.580000522\"> </a></td><td>Alacrima</td></tr><tr><td style=\"white-space:nowrap\">HP:0100704<a name=\"hpo-HP.580100704\"> </a></td><td>Cerebral visual impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0012713<a name=\"hpo-HP.580012713\"> </a></td><td>Moderate hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002307<a name=\"hpo-HP.580002307\"> </a></td><td>Drooling</td></tr><tr><td style=\"white-space:nowrap\">HP:0002714<a name=\"hpo-HP.580002714\"> </a></td><td>Downturned corners of mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000191<a name=\"hpo-HP.580000191\"> </a></td><td>Accessory oral frenulum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000158<a name=\"hpo-HP.580000158\"> </a></td><td>Macroglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012020<a name=\"hpo-HP.580012020\"> </a></td><td>Right aortic arch</td></tr><tr><td style=\"white-space:nowrap\">HP:0002104<a name=\"hpo-HP.580002104\"> </a></td><td>Apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0000598<a name=\"hpo-HP.580000598\"> </a></td><td>Abnormality of the ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0007874<a name=\"hpo-HP.580007874\"> </a></td><td>Almond-shaped palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0010804<a name=\"hpo-HP.580010804\"> </a></td><td>Tented upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000885<a name=\"hpo-HP.580000885\"> </a></td><td>Broad ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000768<a name=\"hpo-HP.580000768\"> </a></td><td>Pectus carinatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001680<a name=\"hpo-HP.580001680\"> </a></td><td>Coarctation of aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0000687<a name=\"hpo-HP.580000687\"> </a></td><td>Widely spaced teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000047<a name=\"hpo-HP.580000047\"> </a></td><td>Hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0001943<a name=\"hpo-HP.580001943\"> </a></td><td>Hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012369<a name=\"hpo-HP.580012369\"> </a></td><td>Abnormality of malar bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0009900<a name=\"hpo-HP.580009900\"> </a></td><td>Unilateral deafness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000023<a name=\"hpo-HP.580000023\"> </a></td><td>Inguinal hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000074<a name=\"hpo-HP.580000074\"> </a></td><td>Ureteropelvic junction obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001800<a name=\"hpo-HP.580001800\"> </a></td><td>Hypoplastic toenails</td></tr><tr><td style=\"white-space:nowrap\">HP:0001804<a name=\"hpo-HP.580001804\"> </a></td><td>Hypoplastic fingernail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002949<a name=\"hpo-HP.580002949\"> </a></td><td>Fused cervical vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0008050<a name=\"hpo-HP.580008050\"> </a></td><td>Abnormality of the palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0008577<a name=\"hpo-HP.580008577\"> </a></td><td>Underfolded helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0008589<a name=\"hpo-HP.580008589\"> </a></td><td>Hypoplastic helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0010863<a name=\"hpo-HP.580010863\"> </a></td><td>Receptive language delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0002282<a name=\"hpo-HP.580002282\"> </a></td><td>Gray matter heterotopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002085<a name=\"hpo-HP.580002085\"> </a></td><td>Occipital encephalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0001057<a name=\"hpo-HP.580001057\"> </a></td><td>Aplasia cutis congenita</td></tr><tr><td style=\"white-space:nowrap\">HP:0000211<a name=\"hpo-HP.580000211\"> </a></td><td>Trismus</td></tr><tr><td style=\"white-space:nowrap\">HP:0008422<a name=\"hpo-HP.580008422\"> </a></td><td>Vertebral wedging</td></tr><tr><td style=\"white-space:nowrap\">HP:0003170<a name=\"hpo-HP.580003170\"> </a></td><td>Abnormality of the acetabulum</td></tr><tr><td style=\"white-space:nowrap\">HP:0003272<a name=\"hpo-HP.580003272\"> </a></td><td>Abnormality of the hip bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0003028<a name=\"hpo-HP.580003028\"> </a></td><td>Abnormality of the ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0003301<a name=\"hpo-HP.580003301\"> </a></td><td>Irregular vertebral endplates</td></tr><tr><td style=\"white-space:nowrap\">HP:0010508<a name=\"hpo-HP.580010508\"> </a></td><td>Metatarsus valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0009811<a name=\"hpo-HP.580009811\"> </a></td><td>Abnormality of the elbow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000736<a name=\"hpo-HP.580000736\"> </a></td><td>Short attention span</td></tr><tr><td style=\"white-space:nowrap\">HP:0002912<a name=\"hpo-HP.580002912\"> </a></td><td>Methylmalonic acidemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001941<a name=\"hpo-HP.580001941\"> </a></td><td>Acidosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001992<a name=\"hpo-HP.580001992\"> </a></td><td>Organic aciduria</td></tr><tr><td style=\"white-space:nowrap\">HP:0009027<a name=\"hpo-HP.580009027\"> </a></td><td>Foot dorsiflexor weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002063<a name=\"hpo-HP.580002063\"> </a></td><td>Rigidity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000384<a name=\"hpo-HP.580000384\"> </a></td><td>Preauricular skin tag</td></tr><tr><td style=\"white-space:nowrap\">HP:0200046<a name=\"hpo-HP.580200046\"> </a></td><td>Cat cry</td></tr><tr><td style=\"white-space:nowrap\">HP:0001357<a name=\"hpo-HP.580001357\"> </a></td><td>Plagiocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000670<a name=\"hpo-HP.580000670\"> </a></td><td>Carious teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0011090<a name=\"hpo-HP.580011090\"> </a></td><td>Fused teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0012810<a name=\"hpo-HP.580012810\"> </a></td><td>Wide nasal base</td></tr><tr><td style=\"white-space:nowrap\">HP:0010296<a name=\"hpo-HP.580010296\"> </a></td><td>Ankyloglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001636<a name=\"hpo-HP.580001636\"> </a></td><td>Tetralogy of Fallot</td></tr><tr><td style=\"white-space:nowrap\">HP:0001305<a name=\"hpo-HP.580001305\"> </a></td><td>Dandy-Walker malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000238<a name=\"hpo-HP.580000238\"> </a></td><td>Hydrocephalus</td></tr><tr><td style=\"white-space:nowrap\">HP:0005469<a name=\"hpo-HP.580005469\"> </a></td><td>Flat occiput</td></tr><tr><td style=\"white-space:nowrap\">HP:0000270<a name=\"hpo-HP.580000270\"> </a></td><td>Delayed cranial suture closure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000239<a name=\"hpo-HP.580000239\"> </a></td><td>Large fontanelles</td></tr><tr><td style=\"white-space:nowrap\">HP:0010537<a name=\"hpo-HP.580010537\"> </a></td><td>Wide cranial sutures</td></tr><tr><td style=\"white-space:nowrap\">HP:0002217<a name=\"hpo-HP.580002217\"> </a></td><td>Slow-growing hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000587<a name=\"hpo-HP.580000587\"> </a></td><td>Abnormality of the optic nerve</td></tr><tr><td style=\"white-space:nowrap\">HP:0005989<a name=\"hpo-HP.580005989\"> </a></td><td>Redundant neck skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010775<a name=\"hpo-HP.580010775\"> </a></td><td>Vascular ring</td></tr><tr><td style=\"white-space:nowrap\">HP:0002779<a name=\"hpo-HP.580002779\"> </a></td><td>Tracheomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002827<a name=\"hpo-HP.580002827\"> </a></td><td>Hip dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001302<a name=\"hpo-HP.580001302\"> </a></td><td>Pachygyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0007362<a name=\"hpo-HP.580007362\"> </a></td><td>Aplasia/Hypoplasia of the brainstem</td></tr><tr><td style=\"white-space:nowrap\">HP:0001558<a name=\"hpo-HP.580001558\"> </a></td><td>Decreased fetal movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010878<a name=\"hpo-HP.580010878\"> </a></td><td>Fetal cystic hygroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0011398<a name=\"hpo-HP.580011398\"> </a></td><td>Central hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002071<a name=\"hpo-HP.580002071\"> </a></td><td>Abnormality of extrapyramidal motor function</td></tr><tr><td style=\"white-space:nowrap\">HP:0000826<a name=\"hpo-HP.580000826\"> </a></td><td>Precocious puberty</td></tr><tr><td style=\"white-space:nowrap\">HP:0000014<a name=\"hpo-HP.580000014\"> </a></td><td>Abnormality of the bladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0005037<a name=\"hpo-HP.580005037\"> </a></td><td>Proximal radio-ulnar synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100543<a name=\"hpo-HP.580100543\"> </a></td><td>Cognitive impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000481<a name=\"hpo-HP.580000481\"> </a></td><td>Abnormal cornea morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000076<a name=\"hpo-HP.580000076\"> </a></td><td>Vesicoureteral reflux</td></tr><tr><td style=\"white-space:nowrap\">HP:0000297<a name=\"hpo-HP.580000297\"> </a></td><td>Facial hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000391<a name=\"hpo-HP.580000391\"> </a></td><td>Thickened helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0001162<a name=\"hpo-HP.580001162\"> </a></td><td>Postaxial hand polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001385<a name=\"hpo-HP.580001385\"> </a></td><td>Hip dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002342<a name=\"hpo-HP.580002342\"> </a></td><td>Intellectual disability, moderate</td></tr><tr><td style=\"white-space:nowrap\">HP:0003191<a name=\"hpo-HP.580003191\"> </a></td><td>Cleft ala nasi</td></tr><tr><td style=\"white-space:nowrap\">HP:0009765<a name=\"hpo-HP.580009765\"> </a></td><td>Low hanging columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0010297<a name=\"hpo-HP.580010297\"> </a></td><td>Bifid tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0011330<a name=\"hpo-HP.580011330\"> </a></td><td>Metopic synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012804<a name=\"hpo-HP.580012804\"> </a></td><td>Corneal ulceration</td></tr><tr><td style=\"white-space:nowrap\">HP:0010485<a name=\"hpo-HP.580010485\"> </a></td><td>Hyperextensibility at elbow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000609<a name=\"hpo-HP.580000609\"> </a></td><td>Optic nerve hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001176<a name=\"hpo-HP.580001176\"> </a></td><td>Large hands</td></tr><tr><td style=\"white-space:nowrap\">HP:0004233<a name=\"hpo-HP.580004233\"> </a></td><td>Advanced ossification of carpal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0100842<a name=\"hpo-HP.580100842\"> </a></td><td>Septo-optic dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002034<a name=\"hpo-HP.580002034\"> </a></td><td>Abnormality of the rectum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002283<a name=\"hpo-HP.580002283\"> </a></td><td>Global brain atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003115<a name=\"hpo-HP.580003115\"> </a></td><td>Abnormal EKG</td></tr><tr><td style=\"white-space:nowrap\">HP:0002577<a name=\"hpo-HP.580002577\"> </a></td><td>Abnormal stomach morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002539<a name=\"hpo-HP.580002539\"> </a></td><td>Cortical dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006818<a name=\"hpo-HP.580006818\"> </a></td><td>4-layered lissencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000593<a name=\"hpo-HP.580000593\"> </a></td><td>Abnormal anterior chamber morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000179<a name=\"hpo-HP.580000179\"> </a></td><td>Thick lower lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002002<a name=\"hpo-HP.580002002\"> </a></td><td>Deep philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0009931<a name=\"hpo-HP.580009931\"> </a></td><td>Enlarged naris</td></tr><tr><td style=\"white-space:nowrap\">HP:0002948<a name=\"hpo-HP.580002948\"> </a></td><td>Vertebral fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002937<a name=\"hpo-HP.580002937\"> </a></td><td>Hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0002308<a name=\"hpo-HP.580002308\"> </a></td><td>Arnold-Chiari malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011320<a name=\"hpo-HP.580011320\"> </a></td><td>Unilambdoid synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002781<a name=\"hpo-HP.580002781\"> </a></td><td>Upper airway obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001363<a name=\"hpo-HP.580001363\"> </a></td><td>Craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000204<a name=\"hpo-HP.580000204\"> </a></td><td>Cleft upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001738<a name=\"hpo-HP.580001738\"> </a></td><td>Exocrine pancreatic insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002823<a name=\"hpo-HP.580002823\"> </a></td><td>Abnormality of femur morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000823<a name=\"hpo-HP.580000823\"> </a></td><td>Delayed puberty</td></tr><tr><td style=\"white-space:nowrap\">HP:0100279<a name=\"hpo-HP.580100279\"> </a></td><td>Ulcerative colitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003834<a name=\"hpo-HP.580003834\"> </a></td><td>Shoulder dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001065<a name=\"hpo-HP.580001065\"> </a></td><td>Striae distensae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000448<a name=\"hpo-HP.580000448\"> </a></td><td>Prominent nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0000554<a name=\"hpo-HP.580000554\"> </a></td><td>Uveitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001006<a name=\"hpo-HP.580001006\"> </a></td><td>obsolete Hypotrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000501<a name=\"hpo-HP.580000501\"> </a></td><td>Glaucoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000262<a name=\"hpo-HP.580000262\"> </a></td><td>Turricephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000729<a name=\"hpo-HP.580000729\"> </a></td><td>Autistic behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0010800<a name=\"hpo-HP.580010800\"> </a></td><td>Absent cupid's bow</td></tr><tr><td style=\"white-space:nowrap\">HP:0010808<a name=\"hpo-HP.580010808\"> </a></td><td>Protruding tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0009927<a name=\"hpo-HP.580009927\"> </a></td><td>Aplasia of the nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0100539<a name=\"hpo-HP.580100539\"> </a></td><td>Periorbital edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000629<a name=\"hpo-HP.580000629\"> </a></td><td>Periorbital fullness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000178<a name=\"hpo-HP.580000178\"> </a></td><td>Abnormality of lower lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000168<a name=\"hpo-HP.580000168\"> </a></td><td>Abnormality of the gingiva</td></tr><tr><td style=\"white-space:nowrap\">HP:0001022<a name=\"hpo-HP.580001022\"> </a></td><td>Albinism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000177<a name=\"hpo-HP.580000177\"> </a></td><td>Abnormality of upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001337<a name=\"hpo-HP.580001337\"> </a></td><td>Tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002135<a name=\"hpo-HP.580002135\"> </a></td><td>Basal ganglia calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0002352<a name=\"hpo-HP.580002352\"> </a></td><td>Leukoencephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002514<a name=\"hpo-HP.580002514\"> </a></td><td>Cerebral calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0010576<a name=\"hpo-HP.580010576\"> </a></td><td>Intracranial cystic lesion</td></tr><tr><td style=\"white-space:nowrap\">HP:0001622<a name=\"hpo-HP.580001622\"> </a></td><td>Premature birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002415<a name=\"hpo-HP.580002415\"> </a></td><td>Leukodystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001320<a name=\"hpo-HP.580001320\"> </a></td><td>Cerebellar vermis hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001773<a name=\"hpo-HP.580001773\"> </a></td><td>Short foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0002750<a name=\"hpo-HP.580002750\"> </a></td><td>Delayed skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004415<a name=\"hpo-HP.580004415\"> </a></td><td>Pulmonary artery stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012741<a name=\"hpo-HP.580012741\"> </a></td><td>Unilateral cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000036<a name=\"hpo-HP.580000036\"> </a></td><td>Abnormality of the penis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002408<a name=\"hpo-HP.580002408\"> </a></td><td>Cerebral arteriovenous malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0007457<a name=\"hpo-HP.580007457\"> </a></td><td>Prominent veins on trunk</td></tr><tr><td style=\"white-space:nowrap\">HP:0000378<a name=\"hpo-HP.580000378\"> </a></td><td>Cupped ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000396<a name=\"hpo-HP.580000396\"> </a></td><td>Overfolded helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000035<a name=\"hpo-HP.580000035\"> </a></td><td>Abnormal testis morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009895<a name=\"hpo-HP.580009895\"> </a></td><td>Abnormality of the crus of the helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000034<a name=\"hpo-HP.580000034\"> </a></td><td>Hydrocele testis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000722<a name=\"hpo-HP.580000722\"> </a></td><td>Obsessive-compulsive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000845<a name=\"hpo-HP.580000845\"> </a></td><td>Growth hormone excess</td></tr><tr><td style=\"white-space:nowrap\">HP:0100829<a name=\"hpo-HP.580100829\"> </a></td><td>Galactorrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001578<a name=\"hpo-HP.580001578\"> </a></td><td>Increased circulating cortisol level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000786<a name=\"hpo-HP.580000786\"> </a></td><td>Primary amenorrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001701<a name=\"hpo-HP.580001701\"> </a></td><td>Pericarditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002076<a name=\"hpo-HP.580002076\"> </a></td><td>Migraine</td></tr><tr><td style=\"white-space:nowrap\">HP:0004755<a name=\"hpo-HP.580004755\"> </a></td><td>Supraventricular tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010522<a name=\"hpo-HP.580010522\"> </a></td><td>Dyslexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004313<a name=\"hpo-HP.580004313\"> </a></td><td>Decreased circulating antibody level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000011<a name=\"hpo-HP.580000011\"> </a></td><td>Neurogenic bladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000641<a name=\"hpo-HP.580000641\"> </a></td><td>Dysmetric saccades</td></tr><tr><td style=\"white-space:nowrap\">HP:0007772<a name=\"hpo-HP.580007772\"> </a></td><td>Impaired smooth pursuit</td></tr><tr><td style=\"white-space:nowrap\">HP:0001583<a name=\"hpo-HP.580001583\"> </a></td><td>Rotary nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010544<a name=\"hpo-HP.580010544\"> </a></td><td>Vertical nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012735<a name=\"hpo-HP.580012735\"> </a></td><td>Cough</td></tr><tr><td style=\"white-space:nowrap\">HP:0002075<a name=\"hpo-HP.580002075\"> </a></td><td>Dysdiadochokinesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0007256<a name=\"hpo-HP.580007256\"> </a></td><td>Abnormal pyramidal sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0001257<a name=\"hpo-HP.580001257\"> </a></td><td>Spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002321<a name=\"hpo-HP.580002321\"> </a></td><td>Vertigo</td></tr><tr><td style=\"white-space:nowrap\">HP:0002384<a name=\"hpo-HP.580002384\"> </a></td><td>Focal impaired awareness seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011376<a name=\"hpo-HP.580011376\"> </a></td><td>Morphological abnormality of the vestibule of the inner ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0002326<a name=\"hpo-HP.580002326\"> </a></td><td>Transient ischemic attack</td></tr><tr><td style=\"white-space:nowrap\">HP:0005584<a name=\"hpo-HP.580005584\"> </a></td><td>Renal cell carcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0003124<a name=\"hpo-HP.580003124\"> </a></td><td>Hypercholesterolemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003002<a name=\"hpo-HP.580003002\"> </a></td><td>Breast carcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0004953<a name=\"hpo-HP.580004953\"> </a></td><td>obsolete Dilatation of abdominal aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0004944<a name=\"hpo-HP.580004944\"> </a></td><td>Dilatation of the cerebral artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0000100<a name=\"hpo-HP.580000100\"> </a></td><td>Nephrotic syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002783<a name=\"hpo-HP.580002783\"> </a></td><td>Recurrent lower respiratory tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0003470<a name=\"hpo-HP.580003470\"> </a></td><td>Paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006597<a name=\"hpo-HP.580006597\"> </a></td><td>Diaphragmatic paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008151<a name=\"hpo-HP.580008151\"> </a></td><td>Prolonged prothrombin time</td></tr><tr><td style=\"white-space:nowrap\">HP:0010628<a name=\"hpo-HP.580010628\"> </a></td><td>Facial palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011892<a name=\"hpo-HP.580011892\"> </a></td><td>Low levels of vitamin K</td></tr><tr><td style=\"white-space:nowrap\">HP:0001075<a name=\"hpo-HP.580001075\"> </a></td><td>Atrophic scars</td></tr><tr><td style=\"white-space:nowrap\">HP:0001816<a name=\"hpo-HP.580001816\"> </a></td><td>Thin nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002216<a name=\"hpo-HP.580002216\"> </a></td><td>Premature graying of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0003401<a name=\"hpo-HP.580003401\"> </a></td><td>Paresthesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100134<a name=\"hpo-HP.580100134\"> </a></td><td>Abnormality of the axillary hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0100797<a name=\"hpo-HP.580100797\"> </a></td><td>Toenail dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010461<a name=\"hpo-HP.580010461\"> </a></td><td>Abnormality of the male genitalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000044<a name=\"hpo-HP.580000044\"> </a></td><td>Hypogonadotropic hypogonadism</td></tr><tr><td style=\"white-space:nowrap\">HP:0100568<a name=\"hpo-HP.580100568\"> </a></td><td>Neoplasm of the endocrine system</td></tr><tr><td style=\"white-space:nowrap\">HP:0001646<a name=\"hpo-HP.580001646\"> </a></td><td>Abnormal aortic valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000813<a name=\"hpo-HP.580000813\"> </a></td><td>Bicornuate uterus</td></tr><tr><td style=\"white-space:nowrap\">HP:0004380<a name=\"hpo-HP.580004380\"> </a></td><td>Aortic valve calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0001650<a name=\"hpo-HP.580001650\"> </a></td><td>Aortic valve stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000073<a name=\"hpo-HP.580000073\"> </a></td><td>Ureteral duplication</td></tr><tr><td style=\"white-space:nowrap\">HP:0100651<a name=\"hpo-HP.580100651\"> </a></td><td>Type I diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000819<a name=\"hpo-HP.580000819\"> </a></td><td>Diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000573<a name=\"hpo-HP.580000573\"> </a></td><td>Retinal hemorrhage</td></tr><tr><td style=\"white-space:nowrap\">HP:0005264<a name=\"hpo-HP.580005264\"> </a></td><td>Abnormality of the gallbladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000475<a name=\"hpo-HP.580000475\"> </a></td><td>Broad neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000089<a name=\"hpo-HP.580000089\"> </a></td><td>Renal hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000921<a name=\"hpo-HP.580000921\"> </a></td><td>Missing ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0001789<a name=\"hpo-HP.580001789\"> </a></td><td>Hydrops fetalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002089<a name=\"hpo-HP.580002089\"> </a></td><td>Pulmonary hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003422<a name=\"hpo-HP.580003422\"> </a></td><td>Vertebral segmentation defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002323<a name=\"hpo-HP.580002323\"> </a></td><td>Anencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000341<a name=\"hpo-HP.580000341\"> </a></td><td>Narrow forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0002869<a name=\"hpo-HP.580002869\"> </a></td><td>Flared iliac wings</td></tr><tr><td style=\"white-space:nowrap\">HP:0003100<a name=\"hpo-HP.580003100\"> </a></td><td>Slender long bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0003275<a name=\"hpo-HP.580003275\"> </a></td><td>Narrow pelvis bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0009891<a name=\"hpo-HP.580009891\"> </a></td><td>Underdeveloped supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0011039<a name=\"hpo-HP.580011039\"> </a></td><td>Abnormality of the helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0008572<a name=\"hpo-HP.580008572\"> </a></td><td>External ear malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0009738<a name=\"hpo-HP.580009738\"> </a></td><td>Abnormality of the antihelix</td></tr><tr><td style=\"white-space:nowrap\">HP:0011328<a name=\"hpo-HP.580011328\"> </a></td><td>Abnormality of fontanelles</td></tr><tr><td style=\"white-space:nowrap\">HP:0012155<a name=\"hpo-HP.580012155\"> </a></td><td>Decreased corneal sensation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004602<a name=\"hpo-HP.580004602\"> </a></td><td>Cervical C2/C3 vertebral fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002997<a name=\"hpo-HP.580002997\"> </a></td><td>Abnormality of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0009777<a name=\"hpo-HP.580009777\"> </a></td><td>Absent thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002893<a name=\"hpo-HP.580002893\"> </a></td><td>Pituitary adenoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0040278<a name=\"hpo-HP.580040278\"> </a></td><td>Prolactinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001555<a name=\"hpo-HP.580001555\"> </a></td><td>Asymmetry of the thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0000902<a name=\"hpo-HP.580000902\"> </a></td><td>Rib fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002164<a name=\"hpo-HP.580002164\"> </a></td><td>Nail dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011314<a name=\"hpo-HP.580011314\"> </a></td><td>Abnormality of long bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002867<a name=\"hpo-HP.580002867\"> </a></td><td>Abnormality of the ilium</td></tr><tr><td style=\"white-space:nowrap\">HP:0000774<a name=\"hpo-HP.580000774\"> </a></td><td>Narrow chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0006482<a name=\"hpo-HP.580006482\"> </a></td><td>Abnormality of dental morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0004383<a name=\"hpo-HP.580004383\"> </a></td><td>Hypoplastic left heart</td></tr><tr><td style=\"white-space:nowrap\">HP:0002015<a name=\"hpo-HP.580002015\"> </a></td><td>Dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0500093<a name=\"hpo-HP.580500093\"> </a></td><td>Food allergy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001519<a name=\"hpo-HP.580001519\"> </a></td><td>Disproportionate tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0003179<a name=\"hpo-HP.580003179\"> </a></td><td>Protrusio acetabuli</td></tr><tr><td style=\"white-space:nowrap\">HP:0007385<a name=\"hpo-HP.580007385\"> </a></td><td>Aplasia cutis congenita of scalp</td></tr><tr><td style=\"white-space:nowrap\">HP:0000716<a name=\"hpo-HP.580000716\"> </a></td><td>Depressivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0012583<a name=\"hpo-HP.580012583\"> </a></td><td>Unilateral renal hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000618<a name=\"hpo-HP.580000618\"> </a></td><td>Blindness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001004<a name=\"hpo-HP.580001004\"> </a></td><td>Lymphedema</td></tr><tr><td style=\"white-space:nowrap\">HP:0002652<a name=\"hpo-HP.580002652\"> </a></td><td>Skeletal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012520<a name=\"hpo-HP.580012520\"> </a></td><td>Perivascular spaces</td></tr><tr><td style=\"white-space:nowrap\">HP:0005293<a name=\"hpo-HP.580005293\"> </a></td><td>Venous insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0012432<a name=\"hpo-HP.580012432\"> </a></td><td>Chronic fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002578<a name=\"hpo-HP.580002578\"> </a></td><td>Gastroparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001658<a name=\"hpo-HP.580001658\"> </a></td><td>Myocardial infarction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001802<a name=\"hpo-HP.580001802\"> </a></td><td>Absent toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0001821<a name=\"hpo-HP.580001821\"> </a></td><td>Broad nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0000807<a name=\"hpo-HP.580000807\"> </a></td><td>Glandular hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0100582<a name=\"hpo-HP.580100582\"> </a></td><td>Nasal polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002653<a name=\"hpo-HP.580002653\"> </a></td><td>Bone pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0001073<a name=\"hpo-HP.580001073\"> </a></td><td>Cigarette-paper scars</td></tr><tr><td style=\"white-space:nowrap\">HP:0031913<a name=\"hpo-HP.580031913\"> </a></td><td>Rhombencephalosynapsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002617<a name=\"hpo-HP.580002617\"> </a></td><td>Dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005107<a name=\"hpo-HP.580005107\"> </a></td><td>Abnormal sacrum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002025<a name=\"hpo-HP.580002025\"> </a></td><td>Anal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0009099<a name=\"hpo-HP.580009099\"> </a></td><td>Median cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0003212<a name=\"hpo-HP.580003212\"> </a></td><td>Increased circulating IgE level</td></tr><tr><td style=\"white-space:nowrap\">HP:0001319<a name=\"hpo-HP.580001319\"> </a></td><td>Neonatal hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002659<a name=\"hpo-HP.580002659\"> </a></td><td>Increased susceptibility to fractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0025246<a name=\"hpo-HP.580025246\"> </a></td><td>Trichilemmal cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0002107<a name=\"hpo-HP.580002107\"> </a></td><td>Pneumothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0000107<a name=\"hpo-HP.580000107\"> </a></td><td>Renal cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0001025<a name=\"hpo-HP.580001025\"> </a></td><td>Urticaria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002204<a name=\"hpo-HP.580002204\"> </a></td><td>Pulmonary embolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001058<a name=\"hpo-HP.580001058\"> </a></td><td>Poor wound healing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003010<a name=\"hpo-HP.580003010\"> </a></td><td>Prolonged bleeding time</td></tr><tr><td style=\"white-space:nowrap\">HP:0100502<a name=\"hpo-HP.580100502\"> </a></td><td>Vitamin B12 deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0100510<a name=\"hpo-HP.580100510\"> </a></td><td>Low levels of vitamin C</td></tr><tr><td style=\"white-space:nowrap\">HP:0030976<a name=\"hpo-HP.580030976\"> </a></td><td>Abnormal factor VIII activity</td></tr><tr><td style=\"white-space:nowrap\">HP:0100789<a name=\"hpo-HP.580100789\"> </a></td><td>Torus palatinus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000108<a name=\"hpo-HP.580000108\"> </a></td><td>Renal corticomedullary cysts</td></tr><tr><td style=\"white-space:nowrap\">HP:0000072<a name=\"hpo-HP.580000072\"> </a></td><td>Hydroureter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000019<a name=\"hpo-HP.580000019\"> </a></td><td>Urinary hesitancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100771<a name=\"hpo-HP.580100771\"> </a></td><td>Hypoperistalsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000021<a name=\"hpo-HP.580000021\"> </a></td><td>Megacystis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004388<a name=\"hpo-HP.580004388\"> </a></td><td>Microcolon</td></tr><tr><td style=\"white-space:nowrap\">HP:0005247<a name=\"hpo-HP.580005247\"> </a></td><td>Hypoplasia of the abdominal wall musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0004794<a name=\"hpo-HP.580004794\"> </a></td><td>Malrotation of small bowel</td></tr><tr><td style=\"white-space:nowrap\">HP:0000045<a name=\"hpo-HP.580000045\"> </a></td><td>Abnormality of the scrotum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002236<a name=\"hpo-HP.580002236\"> </a></td><td>Frontal upsweep of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000212<a name=\"hpo-HP.580000212\"> </a></td><td>Gingival overgrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001808<a name=\"hpo-HP.580001808\"> </a></td><td>Fragile nails</td></tr><tr><td style=\"white-space:nowrap\">HP:0000225<a name=\"hpo-HP.580000225\"> </a></td><td>Gingival bleeding</td></tr><tr><td style=\"white-space:nowrap\">HP:0006009<a name=\"hpo-HP.580006009\"> </a></td><td>Broad phalanx</td></tr><tr><td style=\"white-space:nowrap\">HP:0001837<a name=\"hpo-HP.580001837\"> </a></td><td>Broad toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001946<a name=\"hpo-HP.580001946\"> </a></td><td>Ketosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002490<a name=\"hpo-HP.580002490\"> </a></td><td>Increased CSF lactate</td></tr><tr><td style=\"white-space:nowrap\">HP:0002922<a name=\"hpo-HP.580002922\"> </a></td><td>Increased CSF protein</td></tr><tr><td style=\"white-space:nowrap\">HP:0003128<a name=\"hpo-HP.580003128\"> </a></td><td>Lactic acidosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003111<a name=\"hpo-HP.580003111\"> </a></td><td>Abnormal blood ion concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0032234<a name=\"hpo-HP.580032234\"> </a></td><td>Increased circulating creatine kinase MM isoform</td></tr><tr><td style=\"white-space:nowrap\">HP:0003348<a name=\"hpo-HP.580003348\"> </a></td><td>Hyperalaninemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008347<a name=\"hpo-HP.580008347\"> </a></td><td>Decreased activity of mitochondrial complex IV</td></tr><tr><td style=\"white-space:nowrap\">HP:0000326<a name=\"hpo-HP.580000326\"> </a></td><td>Abnormality of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0010758<a name=\"hpo-HP.580010758\"> </a></td><td>Abnormality of the premaxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0005681<a name=\"hpo-HP.580005681\"> </a></td><td>Juvenile rheumatoid arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000514<a name=\"hpo-HP.580000514\"> </a></td><td>Slow saccadic eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0002788<a name=\"hpo-HP.580002788\"> </a></td><td>Recurrent upper respiratory tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0003396<a name=\"hpo-HP.580003396\"> </a></td><td>Syringomyelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003011<a name=\"hpo-HP.580003011\"> </a></td><td>Abnormality of the musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0002098<a name=\"hpo-HP.580002098\"> </a></td><td>Respiratory distress</td></tr><tr><td style=\"white-space:nowrap\">HP:0002018<a name=\"hpo-HP.580002018\"> </a></td><td>Nausea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002014<a name=\"hpo-HP.580002014\"> </a></td><td>Diarrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0025168<a name=\"hpo-HP.580025168\"> </a></td><td>Left ventricular diastolic dysfunction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001679<a name=\"hpo-HP.580001679\"> </a></td><td>Abnormal aortic morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000159<a name=\"hpo-HP.580000159\"> </a></td><td>Abnormal lip morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011338<a name=\"hpo-HP.580011338\"> </a></td><td>Abnormality of mouth shape</td></tr><tr><td style=\"white-space:nowrap\">HP:0000478<a name=\"hpo-HP.580000478\"> </a></td><td>Abnormality of the eye</td></tr><tr><td style=\"white-space:nowrap\">HP:0000154<a name=\"hpo-HP.580000154\"> </a></td><td>Wide mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001513<a name=\"hpo-HP.580001513\"> </a></td><td>Obesity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002475<a name=\"hpo-HP.580002475\"> </a></td><td>Myelomeningocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0003765<a name=\"hpo-HP.580003765\"> </a></td><td>Psoriasiform dermatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010289<a name=\"hpo-HP.580010289\"> </a></td><td>Cleft of alveolar ridge of maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0003908<a name=\"hpo-HP.580003908\"> </a></td><td>Corner fracture of metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002190<a name=\"hpo-HP.580002190\"> </a></td><td>Choroid plexus cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0004370<a name=\"hpo-HP.580004370\"> </a></td><td>Abnormality of temperature regulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011611<a name=\"hpo-HP.580011611\"> </a></td><td>Interrupted aortic arch</td></tr><tr><td style=\"white-space:nowrap\">HP:0000737<a name=\"hpo-HP.580000737\"> </a></td><td>Irritability</td></tr><tr><td style=\"white-space:nowrap\">HP:0001344<a name=\"hpo-HP.580001344\"> </a></td><td>Absent speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0002376<a name=\"hpo-HP.580002376\"> </a></td><td>Developmental regression</td></tr><tr><td style=\"white-space:nowrap\">HP:0002140<a name=\"hpo-HP.580002140\"> </a></td><td>Ischemic stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0001287<a name=\"hpo-HP.580001287\"> </a></td><td>Meningitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002721<a name=\"hpo-HP.580002721\"> </a></td><td>Immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000041<a name=\"hpo-HP.580000041\"> </a></td><td>Chordee</td></tr><tr><td style=\"white-space:nowrap\">HP:0012854<a name=\"hpo-HP.580012854\"> </a></td><td>Midshaft hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0000808<a name=\"hpo-HP.580000808\"> </a></td><td>Penoscrotal hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0000048<a name=\"hpo-HP.580000048\"> </a></td><td>Bifid scrotum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001047<a name=\"hpo-HP.580001047\"> </a></td><td>Atopic dermatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001621<a name=\"hpo-HP.580001621\"> </a></td><td>Weak voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0002372<a name=\"hpo-HP.580002372\"> </a></td><td>Normal interictal EEG</td></tr><tr><td style=\"white-space:nowrap\">HP:0012803<a name=\"hpo-HP.580012803\"> </a></td><td>Anisometropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011386<a name=\"hpo-HP.580011386\"> </a></td><td>Narrow internal auditory canal</td></tr><tr><td style=\"white-space:nowrap\">HP:0012714<a name=\"hpo-HP.580012714\"> </a></td><td>Severe hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0006485<a name=\"hpo-HP.580006485\"> </a></td><td>Agenesis of incisor</td></tr><tr><td style=\"white-space:nowrap\">HP:0000787<a name=\"hpo-HP.580000787\"> </a></td><td>Nephrolithiasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011332<a name=\"hpo-HP.580011332\"> </a></td><td>Hemifacial hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001909<a name=\"hpo-HP.580001909\"> </a></td><td>Leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004808<a name=\"hpo-HP.580004808\"> </a></td><td>Acute myeloid leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006495<a name=\"hpo-HP.580006495\"> </a></td><td>Aplasia/Hypoplasia of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0001180<a name=\"hpo-HP.580001180\"> </a></td><td>Hand oligodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002991<a name=\"hpo-HP.580002991\"> </a></td><td>Abnormality of fibula morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001849<a name=\"hpo-HP.580001849\"> </a></td><td>Foot oligodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0006507<a name=\"hpo-HP.580006507\"> </a></td><td>Aplasia/hypoplasia of the humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0005613<a name=\"hpo-HP.580005613\"> </a></td><td>Aplasia/hypoplasia of the femur</td></tr><tr><td style=\"white-space:nowrap\">HP:0006492<a name=\"hpo-HP.580006492\"> </a></td><td>Aplasia/Hypoplasia of the fibula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000098<a name=\"hpo-HP.580000098\"> </a></td><td>Tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0003311<a name=\"hpo-HP.580003311\"> </a></td><td>Hypoplasia of the odontoid process</td></tr><tr><td style=\"white-space:nowrap\">HP:0005752<a name=\"hpo-HP.580005752\"> </a></td><td>Flattened moderately deformed vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0030039<a name=\"hpo-HP.580030039\"> </a></td><td>Fused thoracic vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0003304<a name=\"hpo-HP.580003304\"> </a></td><td>Spondylolysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001659<a name=\"hpo-HP.580001659\"> </a></td><td>Aortic regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002984<a name=\"hpo-HP.580002984\"> </a></td><td>Hypoplasia of the radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0009944<a name=\"hpo-HP.580009944\"> </a></td><td>Partial duplication of thumb phalanx</td></tr><tr><td style=\"white-space:nowrap\">HP:0005819<a name=\"hpo-HP.580005819\"> </a></td><td>Short middle phalanx of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0002110<a name=\"hpo-HP.580002110\"> </a></td><td>Bronchiectasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001677<a name=\"hpo-HP.580001677\"> </a></td><td>Coronary artery atherosclerosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001737<a name=\"hpo-HP.580001737\"> </a></td><td>Pancreatic cysts</td></tr><tr><td style=\"white-space:nowrap\">HP:0005113<a name=\"hpo-HP.580005113\"> </a></td><td>Aortic arch aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003022<a name=\"hpo-HP.580003022\"> </a></td><td>Hypoplasia of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0002205<a name=\"hpo-HP.580002205\"> </a></td><td>Recurrent respiratory infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0001669<a name=\"hpo-HP.580001669\"> </a></td><td>Transposition of the great arteries</td></tr><tr><td style=\"white-space:nowrap\">HP:0001716<a name=\"hpo-HP.580001716\"> </a></td><td>Wolff-Parkinson-White syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002758<a name=\"hpo-HP.580002758\"> </a></td><td>Osteoarthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002037<a name=\"hpo-HP.580002037\"> </a></td><td>Inflammation of the large intestine</td></tr><tr><td style=\"white-space:nowrap\">HP:0009892<a name=\"hpo-HP.580009892\"> </a></td><td>Anotia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011331<a name=\"hpo-HP.580011331\"> </a></td><td>Hemifacial atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0009118<a name=\"hpo-HP.580009118\"> </a></td><td>Aplasia/Hypoplasia of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0009940<a name=\"hpo-HP.580009940\"> </a></td><td>Asymmetry of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000682<a name=\"hpo-HP.580000682\"> </a></td><td>Abnormality of dental enamel</td></tr><tr><td style=\"white-space:nowrap\">HP:0009908<a name=\"hpo-HP.580009908\"> </a></td><td>Anterior creases of earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001541<a name=\"hpo-HP.580001541\"> </a></td><td>Ascites</td></tr><tr><td style=\"white-space:nowrap\">HP:0006687<a name=\"hpo-HP.580006687\"> </a></td><td>Aortic tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0010535<a name=\"hpo-HP.580010535\"> </a></td><td>Sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0100633<a name=\"hpo-HP.580100633\"> </a></td><td>Esophagitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002105<a name=\"hpo-HP.580002105\"> </a></td><td>Hemoptysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002613<a name=\"hpo-HP.580002613\"> </a></td><td>Biliary cirrhosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004469<a name=\"hpo-HP.580004469\"> </a></td><td>Chronic bronchitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002720<a name=\"hpo-HP.580002720\"> </a></td><td>Decreased circulating IgA level</td></tr><tr><td style=\"white-space:nowrap\">HP:0002904<a name=\"hpo-HP.580002904\"> </a></td><td>Hyperbilirubinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003237<a name=\"hpo-HP.580003237\"> </a></td><td>Increased circulating IgG level</td></tr><tr><td style=\"white-space:nowrap\">HP:0003262<a name=\"hpo-HP.580003262\"> </a></td><td>Smooth muscle antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0011227<a name=\"hpo-HP.580011227\"> </a></td><td>Elevated C-reactive protein level</td></tr><tr><td style=\"white-space:nowrap\">HP:0001852<a name=\"hpo-HP.580001852\"> </a></td><td>Sandal gap</td></tr><tr><td style=\"white-space:nowrap\">HP:0004381<a name=\"hpo-HP.580004381\"> </a></td><td>Supravalvular aortic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100700<a name=\"hpo-HP.580100700\"> </a></td><td>Abnormal arachnoid mater morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002624<a name=\"hpo-HP.580002624\"> </a></td><td>Abnormal venous morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002289<a name=\"hpo-HP.580002289\"> </a></td><td>Alopecia universalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0009588<a name=\"hpo-HP.580009588\"> </a></td><td>Vestibular Schwannoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001648<a name=\"hpo-HP.580001648\"> </a></td><td>Cor pulmonale</td></tr><tr><td style=\"white-space:nowrap\">HP:0002091<a name=\"hpo-HP.580002091\"> </a></td><td>Restrictive ventilatory defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002092<a name=\"hpo-HP.580002092\"> </a></td><td>Pulmonary arterial hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0002113<a name=\"hpo-HP.580002113\"> </a></td><td>Pulmonary infiltrates</td></tr><tr><td style=\"white-space:nowrap\">HP:0003138<a name=\"hpo-HP.580003138\"> </a></td><td>Increased blood urea nitrogen</td></tr><tr><td style=\"white-space:nowrap\">HP:0003259<a name=\"hpo-HP.580003259\"> </a></td><td>Elevated serum creatinine</td></tr><tr><td style=\"white-space:nowrap\">HP:0005180<a name=\"hpo-HP.580005180\"> </a></td><td>Tricuspid regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0012585<a name=\"hpo-HP.580012585\"> </a></td><td>Renal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005133<a name=\"hpo-HP.580005133\"> </a></td><td>Right ventricular dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005575<a name=\"hpo-HP.580005575\"> </a></td><td>Hemolytic-uremic syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0001697<a name=\"hpo-HP.580001697\"> </a></td><td>Abnormal pericardium morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012486<a name=\"hpo-HP.580012486\"> </a></td><td>Myelitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002385<a name=\"hpo-HP.580002385\"> </a></td><td>Paraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006706<a name=\"hpo-HP.580006706\"> </a></td><td>Cystic liver disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0010880<a name=\"hpo-HP.580010880\"> </a></td><td>Increased nuchal translucency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000457<a name=\"hpo-HP.580000457\"> </a></td><td>Depressed nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0002263<a name=\"hpo-HP.580002263\"> </a></td><td>Exaggerated cupid's bow</td></tr><tr><td style=\"white-space:nowrap\">HP:0002500<a name=\"hpo-HP.580002500\"> </a></td><td>Abnormality of the cerebral white matter</td></tr><tr><td style=\"white-space:nowrap\">HP:0002835<a name=\"hpo-HP.580002835\"> </a></td><td>Aspiration</td></tr><tr><td style=\"white-space:nowrap\">HP:0000600<a name=\"hpo-HP.580000600\"> </a></td><td>Abnormality of the pharynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0004327<a name=\"hpo-HP.580004327\"> </a></td><td>Abnormal vitreous humor morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0004378<a name=\"hpo-HP.580004378\"> </a></td><td>Abnormality of the anus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012374<a name=\"hpo-HP.580012374\"> </a></td><td>obsolete Abnormal globe morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100768<a name=\"hpo-HP.580100768\"> </a></td><td>Choriocarcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0030991<a name=\"hpo-HP.580030991\"> </a></td><td>Sclerosing cholangitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006510<a name=\"hpo-HP.580006510\"> </a></td><td>Chronic pulmonary obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0000710<a name=\"hpo-HP.580000710\"> </a></td><td>Hyperorality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001270<a name=\"hpo-HP.580001270\"> </a></td><td>Motor delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0001548<a name=\"hpo-HP.580001548\"> </a></td><td>Overgrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002311<a name=\"hpo-HP.580002311\"> </a></td><td>Incoordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0006288<a name=\"hpo-HP.580006288\"> </a></td><td>Advanced eruption of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0006323<a name=\"hpo-HP.580006323\"> </a></td><td>Premature loss of primary teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009890<a name=\"hpo-HP.580009890\"> </a></td><td>High anterior hairline</td></tr><tr><td style=\"white-space:nowrap\">HP:0100034<a name=\"hpo-HP.580100034\"> </a></td><td>Motor tics</td></tr><tr><td style=\"white-space:nowrap\">HP:0100035<a name=\"hpo-HP.580100035\"> </a></td><td>Phonic tics</td></tr><tr><td style=\"white-space:nowrap\">HP:0000348<a name=\"hpo-HP.580000348\"> </a></td><td>High forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0001520<a name=\"hpo-HP.580001520\"> </a></td><td>Large for gestational age</td></tr><tr><td style=\"white-space:nowrap\">HP:0001239<a name=\"hpo-HP.580001239\"> </a></td><td>Wrist flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0007359<a name=\"hpo-HP.580007359\"> </a></td><td>Focal-onset seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000430<a name=\"hpo-HP.580000430\"> </a></td><td>Underdeveloped nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0007400<a name=\"hpo-HP.580007400\"> </a></td><td>Irregular hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0100495<a name=\"hpo-HP.580100495\"> </a></td><td>Mastocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012378<a name=\"hpo-HP.580012378\"> </a></td><td>Fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002046<a name=\"hpo-HP.580002046\"> </a></td><td>Heat intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0003270<a name=\"hpo-HP.580003270\"> </a></td><td>Abdominal distention</td></tr><tr><td style=\"white-space:nowrap\">HP:0002180<a name=\"hpo-HP.580002180\"> </a></td><td>Neurodegeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0003493<a name=\"hpo-HP.580003493\"> </a></td><td>Antinuclear antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0030057<a name=\"hpo-HP.580030057\"> </a></td><td>Autoimmune antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0006802<a name=\"hpo-HP.580006802\"> </a></td><td>Abnormal anterior horn cell morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000064<a name=\"hpo-HP.580000064\"> </a></td><td>Hypoplastic labia minora</td></tr><tr><td style=\"white-space:nowrap\">HP:0000338<a name=\"hpo-HP.580000338\"> </a></td><td>Hypomimic face</td></tr><tr><td style=\"white-space:nowrap\">HP:0001642<a name=\"hpo-HP.580001642\"> </a></td><td>Pulmonic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011344<a name=\"hpo-HP.580011344\"> </a></td><td>Severe global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0200007<a name=\"hpo-HP.580200007\"> </a></td><td>Abnormal size of the palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0004464<a name=\"hpo-HP.580004464\"> </a></td><td>Postauricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0000130<a name=\"hpo-HP.580000130\"> </a></td><td>Abnormality of the uterus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000137<a name=\"hpo-HP.580000137\"> </a></td><td>Abnormality of the ovary</td></tr><tr><td style=\"white-space:nowrap\">HP:0000142<a name=\"hpo-HP.580000142\"> </a></td><td>Abnormal vagina morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000370<a name=\"hpo-HP.580000370\"> </a></td><td>Abnormality of the middle ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0011787<a name=\"hpo-HP.580011787\"> </a></td><td>Central hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000274<a name=\"hpo-HP.580000274\"> </a></td><td>Small face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000446<a name=\"hpo-HP.580000446\"> </a></td><td>Narrow nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000622<a name=\"hpo-HP.580000622\"> </a></td><td>Blurred vision</td></tr><tr><td style=\"white-space:nowrap\">HP:0001245<a name=\"hpo-HP.580001245\"> </a></td><td>Small thenar eminence</td></tr><tr><td style=\"white-space:nowrap\">HP:0009601<a name=\"hpo-HP.580009601\"> </a></td><td>Aplasia/Hypoplasia of the thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0011343<a name=\"hpo-HP.580011343\"> </a></td><td>Moderate global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0000419<a name=\"hpo-HP.580000419\"> </a></td><td>Abnormality of the nasal septum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000502<a name=\"hpo-HP.580000502\"> </a></td><td>Abnormal conjunctiva morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000591<a name=\"hpo-HP.580000591\"> </a></td><td>Abnormal sclera morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000615<a name=\"hpo-HP.580000615\"> </a></td><td>Abnormal pupil morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001163<a name=\"hpo-HP.580001163\"> </a></td><td>Abnormality of the metacarpal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0001832<a name=\"hpo-HP.580001832\"> </a></td><td>Abnormal metatarsal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001850<a name=\"hpo-HP.580001850\"> </a></td><td>Abnormality of the tarsal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0010490<a name=\"hpo-HP.580010490\"> </a></td><td>Abnormality of the palmar creases</td></tr><tr><td style=\"white-space:nowrap\">HP:0010881<a name=\"hpo-HP.580010881\"> </a></td><td>Abnormality of the umbilical cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0009113<a name=\"hpo-HP.580009113\"> </a></td><td>Diaphragmatic weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0011664<a name=\"hpo-HP.580011664\"> </a></td><td>Left ventricular noncompaction cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100240<a name=\"hpo-HP.580100240\"> </a></td><td>Synostosis of joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0001838<a name=\"hpo-HP.580001838\"> </a></td><td>Rocker bottom foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0003717<a name=\"hpo-HP.580003717\"> </a></td><td>Minimal subcutaneous fat</td></tr><tr><td style=\"white-space:nowrap\">HP:0001339<a name=\"hpo-HP.580001339\"> </a></td><td>Lissencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001591<a name=\"hpo-HP.580001591\"> </a></td><td>Bell-shaped thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0002655<a name=\"hpo-HP.580002655\"> </a></td><td>Spondyloepiphyseal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002983<a name=\"hpo-HP.580002983\"> </a></td><td>Micromelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003016<a name=\"hpo-HP.580003016\"> </a></td><td>Metaphyseal widening</td></tr><tr><td style=\"white-space:nowrap\">HP:0009826<a name=\"hpo-HP.580009826\"> </a></td><td>Limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0004488<a name=\"hpo-HP.580004488\"> </a></td><td>Macrocephaly at birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001695<a name=\"hpo-HP.580001695\"> </a></td><td>Cardiac arrest</td></tr><tr><td style=\"white-space:nowrap\">HP:0001712<a name=\"hpo-HP.580001712\"> </a></td><td>Left ventricular hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100775<a name=\"hpo-HP.580100775\"> </a></td><td>Dural ectasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000846<a name=\"hpo-HP.580000846\"> </a></td><td>Adrenal insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002925<a name=\"hpo-HP.580002925\"> </a></td><td>Increased thyroid-stimulating hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0100646<a name=\"hpo-HP.580100646\"> </a></td><td>Thyroiditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000836<a name=\"hpo-HP.580000836\"> </a></td><td>Hyperthyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0004414<a name=\"hpo-HP.580004414\"> </a></td><td>Abnormality of the pulmonary artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0000465<a name=\"hpo-HP.580000465\"> </a></td><td>Webbed neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000723<a name=\"hpo-HP.580000723\"> </a></td><td>Restrictive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0002253<a name=\"hpo-HP.580002253\"> </a></td><td>Colonic diverticula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001310<a name=\"hpo-HP.580001310\"> </a></td><td>Dysmetria</td></tr><tr><td style=\"white-space:nowrap\">HP:0000093<a name=\"hpo-HP.580000093\"> </a></td><td>Proteinuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002907<a name=\"hpo-HP.580002907\"> </a></td><td>Microscopic hematuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0003073<a name=\"hpo-HP.580003073\"> </a></td><td>Hypoalbuminemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004315<a name=\"hpo-HP.580004315\"> </a></td><td>Decreased circulating IgG level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000795<a name=\"hpo-HP.580000795\"> </a></td><td>Abnormality of the urethra</td></tr><tr><td style=\"white-space:nowrap\">HP:0001015<a name=\"hpo-HP.580001015\"> </a></td><td>Prominent superficial veins</td></tr><tr><td style=\"white-space:nowrap\">HP:0004691<a name=\"hpo-HP.580004691\"> </a></td><td>2-3 toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005328<a name=\"hpo-HP.580005328\"> </a></td><td>Progeroid facial appearance</td></tr><tr><td style=\"white-space:nowrap\">HP:0005487<a name=\"hpo-HP.580005487\"> </a></td><td>Prominent metopic ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0007552<a name=\"hpo-HP.580007552\"> </a></td><td>Abnormal subcutaneous fat tissue distribution</td></tr><tr><td style=\"white-space:nowrap\">HP:0100678<a name=\"hpo-HP.580100678\"> </a></td><td>Premature skin wrinkling</td></tr><tr><td style=\"white-space:nowrap\">HP:0031137<a name=\"hpo-HP.580031137\"> </a></td><td>Storage in hepatocytes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002521<a name=\"hpo-HP.580002521\"> </a></td><td>Hypsarrhythmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005390<a name=\"hpo-HP.580005390\"> </a></td><td>Recurrent opportunistic infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0002716<a name=\"hpo-HP.580002716\"> </a></td><td>Lymphadenopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005379<a name=\"hpo-HP.580005379\"> </a></td><td>obsolete Severe T lymphocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004432<a name=\"hpo-HP.580004432\"> </a></td><td>Agammaglobulinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006695<a name=\"hpo-HP.580006695\"> </a></td><td>Atrioventricular canal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0001733<a name=\"hpo-HP.580001733\"> </a></td><td>Pancreatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002350<a name=\"hpo-HP.580002350\"> </a></td><td>Cerebellar cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0012110<a name=\"hpo-HP.580012110\"> </a></td><td>Hypoplasia of the pons</td></tr><tr><td style=\"white-space:nowrap\">HP:0001948<a name=\"hpo-HP.580001948\"> </a></td><td>Alkalosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003113<a name=\"hpo-HP.580003113\"> </a></td><td>Hypochloremia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003155<a name=\"hpo-HP.580003155\"> </a></td><td>Elevated alkaline phosphatase</td></tr><tr><td style=\"white-space:nowrap\">HP:0003542<a name=\"hpo-HP.580003542\"> </a></td><td>Increased serum pyruvate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000421<a name=\"hpo-HP.580000421\"> </a></td><td>Epistaxis</td></tr><tr><td style=\"white-space:nowrap\">HP:0200136<a name=\"hpo-HP.580200136\"> </a></td><td>Oral-pharyngeal dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000805<a name=\"hpo-HP.580000805\"> </a></td><td>Enuresis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005616<a name=\"hpo-HP.580005616\"> </a></td><td>Accelerated skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002459<a name=\"hpo-HP.580002459\"> </a></td><td>obsolete Dysautonomia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007302<a name=\"hpo-HP.580007302\"> </a></td><td>Bipolar affective disorder</td></tr><tr><td style=\"white-space:nowrap\">HP:0100602<a name=\"hpo-HP.580100602\"> </a></td><td>Preeclampsia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100508<a name=\"hpo-HP.580100508\"> </a></td><td>Abnormality of vitamin metabolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001140<a name=\"hpo-HP.580001140\"> </a></td><td>Limbal dermoid</td></tr><tr><td style=\"white-space:nowrap\">HP:0000143<a name=\"hpo-HP.580000143\"> </a></td><td>Rectovaginal fistula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001746<a name=\"hpo-HP.580001746\"> </a></td><td>Asplenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012715<a name=\"hpo-HP.580012715\"> </a></td><td>Profound hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001748<a name=\"hpo-HP.580001748\"> </a></td><td>Polysplenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003072<a name=\"hpo-HP.580003072\"> </a></td><td>Hypercalcemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002905<a name=\"hpo-HP.580002905\"> </a></td><td>Hyperphosphatemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002901<a name=\"hpo-HP.580002901\"> </a></td><td>Hypocalcemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001367<a name=\"hpo-HP.580001367\"> </a></td><td>Abnormal joint morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0010562<a name=\"hpo-HP.580010562\"> </a></td><td>Keloids</td></tr><tr><td style=\"white-space:nowrap\">HP:0004430<a name=\"hpo-HP.580004430\"> </a></td><td>Severe combined immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000003<a name=\"hpo-HP.580000003\"> </a></td><td>Multicystic kidney dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010980<a name=\"hpo-HP.580010980\"> </a></td><td>Hyperlipoproteinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002155<a name=\"hpo-HP.580002155\"> </a></td><td>Hypertriglyceridemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000520<a name=\"hpo-HP.580000520\"> </a></td><td>Proptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000180<a name=\"hpo-HP.580000180\"> </a></td><td>Lobulated tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0005486<a name=\"hpo-HP.580005486\"> </a></td><td>Small fontanelle</td></tr><tr><td style=\"white-space:nowrap\">HP:0000891<a name=\"hpo-HP.580000891\"> </a></td><td>Cervical ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002557<a name=\"hpo-HP.580002557\"> </a></td><td>Hypoplastic nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0009112<a name=\"hpo-HP.580009112\"> </a></td><td>Aplasia of the left hemidiaphragm</td></tr><tr><td style=\"white-space:nowrap\">HP:0001719<a name=\"hpo-HP.580001719\"> </a></td><td>Double outlet right ventricle</td></tr><tr><td style=\"white-space:nowrap\">HP:0001682<a name=\"hpo-HP.580001682\"> </a></td><td>Subvalvular aortic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001667<a name=\"hpo-HP.580001667\"> </a></td><td>Right ventricular hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002101<a name=\"hpo-HP.580002101\"> </a></td><td>Abnormal lung lobation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002202<a name=\"hpo-HP.580002202\"> </a></td><td>Pleural effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002566<a name=\"hpo-HP.580002566\"> </a></td><td>Intestinal malrotation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004510<a name=\"hpo-HP.580004510\"> </a></td><td>Pancreatic islet-cell hyperplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001747<a name=\"hpo-HP.580001747\"> </a></td><td>Accessory spleen</td></tr><tr><td style=\"white-space:nowrap\">HP:0002181<a name=\"hpo-HP.580002181\"> </a></td><td>Cerebral edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000967<a name=\"hpo-HP.580000967\"> </a></td><td>Petechiae</td></tr><tr><td style=\"white-space:nowrap\">HP:0009702<a name=\"hpo-HP.580009702\"> </a></td><td>Carpal synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000927<a name=\"hpo-HP.580000927\"> </a></td><td>Abnormality of skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004348<a name=\"hpo-HP.580004348\"> </a></td><td>Abnormality of bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0003019<a name=\"hpo-HP.580003019\"> </a></td><td>Abnormality of the wrist</td></tr><tr><td style=\"white-space:nowrap\">HP:0003063<a name=\"hpo-HP.580003063\"> </a></td><td>Abnormality of the humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001059<a name=\"hpo-HP.580001059\"> </a></td><td>Pterygium</td></tr><tr><td style=\"white-space:nowrap\">HP:0001528<a name=\"hpo-HP.580001528\"> </a></td><td>Hemihypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011228<a name=\"hpo-HP.580011228\"> </a></td><td>Horizontal eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000766<a name=\"hpo-HP.580000766\"> </a></td><td>Abnormality of the sternum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001254<a name=\"hpo-HP.580001254\"> </a></td><td>Lethargy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002360<a name=\"hpo-HP.580002360\"> </a></td><td>Sleep disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0001063<a name=\"hpo-HP.580001063\"> </a></td><td>Acrocyanosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001769<a name=\"hpo-HP.580001769\"> </a></td><td>Broad foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0010280<a name=\"hpo-HP.580010280\"> </a></td><td>Stomatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001288<a name=\"hpo-HP.580001288\"> </a></td><td>Gait disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0008330<a name=\"hpo-HP.580008330\"> </a></td><td>Reduced von Willebrand factor activity</td></tr><tr><td style=\"white-space:nowrap\">HP:0001954<a name=\"hpo-HP.580001954\"> </a></td><td>Recurrent fever</td></tr><tr><td style=\"white-space:nowrap\">HP:0004311<a name=\"hpo-HP.580004311\"> </a></td><td>Abnormal macrophage morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012539<a name=\"hpo-HP.580012539\"> </a></td><td>Non-Hodgkin lymphoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0002074<a name=\"hpo-HP.580002074\"> </a></td><td>Increased neuronal autofluorescent lipopigment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002973<a name=\"hpo-HP.580002973\"> </a></td><td>Abnormality of the forearm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003203<a name=\"hpo-HP.580003203\"> </a></td><td>Impaired oxidative burst</td></tr><tr><td style=\"white-space:nowrap\">HP:0003027<a name=\"hpo-HP.580003027\"> </a></td><td>Mesomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002754<a name=\"hpo-HP.580002754\"> </a></td><td>Osteomyelitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004431<a name=\"hpo-HP.580004431\"> </a></td><td>Complement deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0001258<a name=\"hpo-HP.580001258\"> </a></td><td>Spastic paraplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012811<a name=\"hpo-HP.580012811\"> </a></td><td>Wide nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0011832<a name=\"hpo-HP.580011832\"> </a></td><td>Narrow nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000288<a name=\"hpo-HP.580000288\"> </a></td><td>Abnormality of the philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002357<a name=\"hpo-HP.580002357\"> </a></td><td>Dysphasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000871<a name=\"hpo-HP.580000871\"> </a></td><td>Panhypopituitarism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000233<a name=\"hpo-HP.580000233\"> </a></td><td>Thin vermilion border</td></tr><tr><td style=\"white-space:nowrap\">HP:0003281<a name=\"hpo-HP.580003281\"> </a></td><td>Increased serum ferritin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010752<a name=\"hpo-HP.580010752\"> </a></td><td>Cleft mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000437<a name=\"hpo-HP.580000437\"> </a></td><td>Depressed nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000453<a name=\"hpo-HP.580000453\"> </a></td><td>Choanal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000863<a name=\"hpo-HP.580000863\"> </a></td><td>Central diabetes insipidus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000058<a name=\"hpo-HP.580000058\"> </a></td><td>Abnormality of the labia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007418<a name=\"hpo-HP.580007418\"> </a></td><td>Alopecia totalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100765<a name=\"hpo-HP.580100765\"> </a></td><td>Abnormality of the tonsils</td></tr><tr><td style=\"white-space:nowrap\">HP:0100747<a name=\"hpo-HP.580100747\"> </a></td><td>Macrodactyly of toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002109<a name=\"hpo-HP.580002109\"> </a></td><td>obsolete Abnormality of the bronchi</td></tr><tr><td style=\"white-space:nowrap\">HP:0011950<a name=\"hpo-HP.580011950\"> </a></td><td>Bronchiolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002850<a name=\"hpo-HP.580002850\"> </a></td><td>Decreased circulating total IgM</td></tr><tr><td style=\"white-space:nowrap\">HP:0001395<a name=\"hpo-HP.580001395\"> </a></td><td>Hepatic fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010701<a name=\"hpo-HP.580010701\"> </a></td><td>Abnormal immunoglobulin level</td></tr><tr><td style=\"white-space:nowrap\">HP:0009928<a name=\"hpo-HP.580009928\"> </a></td><td>Thick nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0010807<a name=\"hpo-HP.580010807\"> </a></td><td>Open bite</td></tr><tr><td style=\"white-space:nowrap\">HP:0002126<a name=\"hpo-HP.580002126\"> </a></td><td>Polymicrogyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002900<a name=\"hpo-HP.580002900\"> </a></td><td>Hypokalemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000155<a name=\"hpo-HP.580000155\"> </a></td><td>Oral ulcer</td></tr><tr><td style=\"white-space:nowrap\">HP:0000135<a name=\"hpo-HP.580000135\"> </a></td><td>Hypogonadism</td></tr><tr><td style=\"white-space:nowrap\">HP:0100783<a name=\"hpo-HP.580100783\"> </a></td><td>Breast aplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000336<a name=\"hpo-HP.580000336\"> </a></td><td>Prominent supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0010557<a name=\"hpo-HP.580010557\"> </a></td><td>Overlapping fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0005100<a name=\"hpo-HP.580005100\"> </a></td><td>Premature birth following premature rupture of fetal membranes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002594<a name=\"hpo-HP.580002594\"> </a></td><td>Pancreatic hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010109<a name=\"hpo-HP.580010109\"> </a></td><td>Short hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0002334<a name=\"hpo-HP.580002334\"> </a></td><td>Abnormality of the cerebellar vermis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003326<a name=\"hpo-HP.580003326\"> </a></td><td>Myalgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001645<a name=\"hpo-HP.580001645\"> </a></td><td>Sudden cardiac death</td></tr><tr><td style=\"white-space:nowrap\">HP:0001612<a name=\"hpo-HP.580001612\"> </a></td><td>Weak cry</td></tr><tr><td style=\"white-space:nowrap\">HP:0001618<a name=\"hpo-HP.580001618\"> </a></td><td>Dysphonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001336<a name=\"hpo-HP.580001336\"> </a></td><td>Myoclonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001283<a name=\"hpo-HP.580001283\"> </a></td><td>Bulbar palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002080<a name=\"hpo-HP.580002080\"> </a></td><td>Intention tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002174<a name=\"hpo-HP.580002174\"> </a></td><td>Postural tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002064<a name=\"hpo-HP.580002064\"> </a></td><td>Spastic gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0009800<a name=\"hpo-HP.580009800\"> </a></td><td>Maternal diabetes</td></tr><tr><td style=\"white-space:nowrap\">HP:0001662<a name=\"hpo-HP.580001662\"> </a></td><td>Bradycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006595<a name=\"hpo-HP.580006595\"> </a></td><td>Scapulohumeral synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005815<a name=\"hpo-HP.580005815\"> </a></td><td>Supernumerary ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000307<a name=\"hpo-HP.580000307\"> </a></td><td>Pointed chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0012371<a name=\"hpo-HP.580012371\"> </a></td><td>Hyperplasia of midface</td></tr><tr><td style=\"white-space:nowrap\">HP:0002643<a name=\"hpo-HP.580002643\"> </a></td><td>Neonatal respiratory distress</td></tr><tr><td style=\"white-space:nowrap\">HP:0002093<a name=\"hpo-HP.580002093\"> </a></td><td>Respiratory insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0010310<a name=\"hpo-HP.580010310\"> </a></td><td>Chylothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0006376<a name=\"hpo-HP.580006376\"> </a></td><td>Limited elbow flexion</td></tr><tr><td style=\"white-space:nowrap\">HP:0006467<a name=\"hpo-HP.580006467\"> </a></td><td>Limited shoulder movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010505<a name=\"hpo-HP.580010505\"> </a></td><td>Limitation of movement at ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0010501<a name=\"hpo-HP.580010501\"> </a></td><td>Limitation of knee mobility</td></tr><tr><td style=\"white-space:nowrap\">HP:0009896<a name=\"hpo-HP.580009896\"> </a></td><td>Abnormality of the antitragus</td></tr><tr><td style=\"white-space:nowrap\">HP:0004404<a name=\"hpo-HP.580004404\"> </a></td><td>Abnormal nipple morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011957<a name=\"hpo-HP.580011957\"> </a></td><td>Abnormal pectoral muscle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000777<a name=\"hpo-HP.580000777\"> </a></td><td>Abnormality of the thymus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000418<a name=\"hpo-HP.580000418\"> </a></td><td>Narrow nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0001572<a name=\"hpo-HP.580001572\"> </a></td><td>Macrodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002967<a name=\"hpo-HP.580002967\"> </a></td><td>Cubitus valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000988<a name=\"hpo-HP.580000988\"> </a></td><td>Skin rash</td></tr><tr><td style=\"white-space:nowrap\">HP:0009733<a name=\"hpo-HP.580009733\"> </a></td><td>Glioma</td></tr><tr><td style=\"white-space:nowrap\">HP:0012452<a name=\"hpo-HP.580012452\"> </a></td><td>Restless legs</td></tr><tr><td style=\"white-space:nowrap\">HP:0100031<a name=\"hpo-HP.580100031\"> </a></td><td>Neoplasm of the thyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0030127<a name=\"hpo-HP.580030127\"> </a></td><td>Endometriosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000123<a name=\"hpo-HP.580000123\"> </a></td><td>Nephritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001974<a name=\"hpo-HP.580001974\"> </a></td><td>Leukocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010976<a name=\"hpo-HP.580010976\"> </a></td><td>B lymphocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000010<a name=\"hpo-HP.580000010\"> </a></td><td>Recurrent urinary tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0100807<a name=\"hpo-HP.580100807\"> </a></td><td>Long fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0000653<a name=\"hpo-HP.580000653\"> </a></td><td>Sparse eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0000171<a name=\"hpo-HP.580000171\"> </a></td><td>Microglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002575<a name=\"hpo-HP.580002575\"> </a></td><td>Tracheoesophageal fistula</td></tr><tr><td style=\"white-space:nowrap\">HP:0009933<a name=\"hpo-HP.580009933\"> </a></td><td>Narrow naris</td></tr><tr><td style=\"white-space:nowrap\">HP:0000883<a name=\"hpo-HP.580000883\"> </a></td><td>Thin ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000121<a name=\"hpo-HP.580000121\"> </a></td><td>Nephrocalcinosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001349<a name=\"hpo-HP.580001349\"> </a></td><td>Facial diplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012037<a name=\"hpo-HP.580012037\"> </a></td><td>Pectoralis amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100560<a name=\"hpo-HP.580100560\"> </a></td><td>Upper limb asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0005684<a name=\"hpo-HP.580005684\"> </a></td><td>Distal arthrogryposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010722<a name=\"hpo-HP.580010722\"> </a></td><td>Asymmetry of the ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0009380<a name=\"hpo-HP.580009380\"> </a></td><td>Aplasia of the fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0001657<a name=\"hpo-HP.580001657\"> </a></td><td>Prolonged QT interval</td></tr><tr><td style=\"white-space:nowrap\">HP:0002040<a name=\"hpo-HP.580002040\"> </a></td><td>Esophageal varix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000613<a name=\"hpo-HP.580000613\"> </a></td><td>Photophobia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000561<a name=\"hpo-HP.580000561\"> </a></td><td>Absent eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002223<a name=\"hpo-HP.580002223\"> </a></td><td>Absent eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0002591<a name=\"hpo-HP.580002591\"> </a></td><td>Polyphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002373<a name=\"hpo-HP.580002373\"> </a></td><td>Febrile seizure (within the age range of 3 months to 6 years)</td></tr><tr><td style=\"white-space:nowrap\">HP:0002419<a name=\"hpo-HP.580002419\"> </a></td><td>Molar tooth sign on MRI</td></tr><tr><td style=\"white-space:nowrap\">HP:0001010<a name=\"hpo-HP.580001010\"> </a></td><td>Hypopigmentation of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0005772<a name=\"hpo-HP.580005772\"> </a></td><td>Aplasia/Hypoplasia of the tibia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002211<a name=\"hpo-HP.580002211\"> </a></td><td>White forelock</td></tr><tr><td style=\"white-space:nowrap\">HP:0007126<a name=\"hpo-HP.580007126\"> </a></td><td>Proximal amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003798<a name=\"hpo-HP.580003798\"> </a></td><td>Nemaline bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0006533<a name=\"hpo-HP.580006533\"> </a></td><td>Bronchodysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003391<a name=\"hpo-HP.580003391\"> </a></td><td>Gowers sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0000771<a name=\"hpo-HP.580000771\"> </a></td><td>Gynecomastia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100785<a name=\"hpo-HP.580100785\"> </a></td><td>Insomnia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010529<a name=\"hpo-HP.580010529\"> </a></td><td>Echolalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000363<a name=\"hpo-HP.580000363\"> </a></td><td>Abnormality of earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002612<a name=\"hpo-HP.580002612\"> </a></td><td>Congenital hepatic fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006721<a name=\"hpo-HP.580006721\"> </a></td><td>Acute lymphoblastic leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001958<a name=\"hpo-HP.580001958\"> </a></td><td>Nonketotic hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003457<a name=\"hpo-HP.580003457\"> </a></td><td>EMG abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0010636<a name=\"hpo-HP.580010636\"> </a></td><td>Schizencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005266<a name=\"hpo-HP.580005266\"> </a></td><td>Intestinal polyp</td></tr><tr><td style=\"white-space:nowrap\">HP:0200063<a name=\"hpo-HP.580200063\"> </a></td><td>Colorectal polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001762<a name=\"hpo-HP.580001762\"> </a></td><td>Talipes equinovarus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000056<a name=\"hpo-HP.580000056\"> </a></td><td>Abnormality of the clitoris</td></tr><tr><td style=\"white-space:nowrap\">HP:0008655<a name=\"hpo-HP.580008655\"> </a></td><td>Aplasia/Hypoplasia of the fallopian tube</td></tr><tr><td style=\"white-space:nowrap\">HP:0002072<a name=\"hpo-HP.580002072\"> </a></td><td>Chorea</td></tr><tr><td style=\"white-space:nowrap\">HP:0008734<a name=\"hpo-HP.580008734\"> </a></td><td>Decreased testicular size</td></tr><tr><td style=\"white-space:nowrap\">HP:0002136<a name=\"hpo-HP.580002136\"> </a></td><td>Broad-based gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0010958<a name=\"hpo-HP.580010958\"> </a></td><td>Bilateral renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002510<a name=\"hpo-HP.580002510\"> </a></td><td>Spastic tetraplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003234<a name=\"hpo-HP.580003234\"> </a></td><td>Decreased plasma carnitine</td></tr><tr><td style=\"white-space:nowrap\">HP:0000720<a name=\"hpo-HP.580000720\"> </a></td><td>Mood swings</td></tr><tr><td style=\"white-space:nowrap\">HP:0012638<a name=\"hpo-HP.580012638\"> </a></td><td>Abnormal nervous system physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002803<a name=\"hpo-HP.580002803\"> </a></td><td>Congenital contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0000152<a name=\"hpo-HP.580000152\"> </a></td><td>Abnormality of head or neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0004377<a name=\"hpo-HP.580004377\"> </a></td><td>Hematological neoplasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0100006<a name=\"hpo-HP.580100006\"> </a></td><td>Neoplasm of the central nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0012759<a name=\"hpo-HP.580012759\"> </a></td><td>Neurodevelopmental abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0011805<a name=\"hpo-HP.580011805\"> </a></td><td>Abnormal skeletal muscle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003634<a name=\"hpo-HP.580003634\"> </a></td><td>Amyoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001507<a name=\"hpo-HP.580001507\"> </a></td><td>Growth abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001939<a name=\"hpo-HP.580001939\"> </a></td><td>Abnormality of metabolism/homeostasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011013<a name=\"hpo-HP.580011013\"> </a></td><td>Abnormal circulating carbohydrate concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0410008<a name=\"hpo-HP.580410008\"> </a></td><td>Abnormality of the peripheral nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0200134<a name=\"hpo-HP.580200134\"> </a></td><td>Epileptic encephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001881<a name=\"hpo-HP.580001881\"> </a></td><td>Abnormal leukocyte morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0005549<a name=\"hpo-HP.580005549\"> </a></td><td>obsolete Congenital neutropenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004439<a name=\"hpo-HP.580004439\"> </a></td><td>Craniofacial dysostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012443<a name=\"hpo-HP.580012443\"> </a></td><td>Abnormality of brain morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000202<a name=\"hpo-HP.580000202\"> </a></td><td>Oral cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0011842<a name=\"hpo-HP.580011842\"> </a></td><td>Abnormality of skeletal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003808<a name=\"hpo-HP.580003808\"> </a></td><td>Abnormal muscle tone</td></tr><tr><td style=\"white-space:nowrap\">HP:0001574<a name=\"hpo-HP.580001574\"> </a></td><td>Abnormality of the integument</td></tr><tr><td style=\"white-space:nowrap\">HP:0030056<a name=\"hpo-HP.580030056\"> </a></td><td>Uncombable hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0003549<a name=\"hpo-HP.580003549\"> </a></td><td>Abnormality of connective tissue</td></tr><tr><td style=\"white-space:nowrap\">HP:0030875<a name=\"hpo-HP.580030875\"> </a></td><td>Abnormality of pulmonary circulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000118<a name=\"hpo-HP.580000118\"> </a></td><td>Phenotypic abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0012469<a name=\"hpo-HP.580012469\"> </a></td><td>Infantile spasms</td></tr><tr><td style=\"white-space:nowrap\">HP:0032894<a name=\"hpo-HP.580032894\"> </a></td><td>Seizure precipitated by febrile infection</td></tr><tr><td style=\"white-space:nowrap\">HP:0100661<a name=\"hpo-HP.580100661\"> </a></td><td>Trigeminal neuralgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012207<a name=\"hpo-HP.580012207\"> </a></td><td>Reduced sperm motility</td></tr><tr><td style=\"white-space:nowrap\">HP:0000798<a name=\"hpo-HP.580000798\"> </a></td><td>Oligospermia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012864<a name=\"hpo-HP.580012864\"> </a></td><td>Abnormal sperm morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008232<a name=\"hpo-HP.580008232\"> </a></td><td>Elevated circulating follicle stimulating hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0040306<a name=\"hpo-HP.580040306\"> </a></td><td>Decreased male libido</td></tr><tr><td style=\"white-space:nowrap\">HP:0012208<a name=\"hpo-HP.580012208\"> </a></td><td>Immotile sperm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000027<a name=\"hpo-HP.580000027\"> </a></td><td>Azoospermia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000870<a name=\"hpo-HP.580000870\"> </a></td><td>Increased circulating prolactin concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0008187<a name=\"hpo-HP.580008187\"> </a></td><td>Absence of secondary sex characteristics</td></tr><tr><td style=\"white-space:nowrap\">HP:0010469<a name=\"hpo-HP.580010469\"> </a></td><td>Absent testis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011969<a name=\"hpo-HP.580011969\"> </a></td><td>Elevated circulating luteinizing hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0040171<a name=\"hpo-HP.580040171\"> </a></td><td>Decreased serum testosterone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0003251<a name=\"hpo-HP.580003251\"> </a></td><td>Male infertility</td></tr><tr><td style=\"white-space:nowrap\">HP:0009804<a name=\"hpo-HP.580009804\"> </a></td><td>Reduced number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000548<a name=\"hpo-HP.580000548\"> </a></td><td>Cone/cone-rod dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000546<a name=\"hpo-HP.580000546\"> </a></td><td>Retinal degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0008002<a name=\"hpo-HP.580008002\"> </a></td><td>Abnormality of macular pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000608<a name=\"hpo-HP.580000608\"> </a></td><td>Macular degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0030611<a name=\"hpo-HP.580030611\"> </a></td><td>Retinal pigment epithelial loss on macular OCT</td></tr><tr><td style=\"white-space:nowrap\">HP:0001135<a name=\"hpo-HP.580001135\"> </a></td><td>Chorioretinal dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030468<a name=\"hpo-HP.580030468\"> </a></td><td>Abnormal multifocal electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:00030532<a name=\"hpo-HP.5800030532\"> </a></td><td>Visual acuity test abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0007401<a name=\"hpo-HP.580007401\"> </a></td><td>Macular atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030466<a name=\"hpo-HP.580030466\"> </a></td><td>Abnormal full-field electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:007737<a name=\"hpo-HP.58007737\"> </a></td><td>Bone spicule pigmentation of the retina</td></tr><tr><td style=\"white-space:nowrap\">HP:0011342<a name=\"hpo-HP.580011342\"> </a></td><td>Mild global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0030610<a name=\"hpo-HP.580030610\"> </a></td><td>Photoreceptor outer segment loss on macular OCT</td></tr><tr><td style=\"white-space:nowrap\">HP:0007722<a name=\"hpo-HP.580007722\"> </a></td><td>Retinal pigment epithelial atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030493<a name=\"hpo-HP.580030493\"> </a></td><td>Abnormality of foveal pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0007843<a name=\"hpo-HP.580007843\"> </a></td><td>Attenuation of retinal blood vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0007754<a name=\"hpo-HP.580007754\"> </a></td><td>Macular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011509<a name=\"hpo-HP.580011509\"> </a></td><td>Macular hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0008527<a name=\"hpo-HP.580008527\"> </a></td><td>Congenital sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0200070<a name=\"hpo-HP.580200070\"> </a></td><td>Peripheral retinal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0007793<a name=\"hpo-HP.580007793\"> </a></td><td>Granular macular appearance</td></tr><tr><td style=\"white-space:nowrap\">HP:0007987<a name=\"hpo-HP.580007987\"> </a></td><td>Progressive visual field defects</td></tr><tr><td style=\"white-space:nowrap\">HP:0100817<a name=\"hpo-HP.580100817\"> </a></td><td>Renovascular hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0007868<a name=\"hpo-HP.580007868\"> </a></td><td>obsolete Age-related macular degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0030527<a name=\"hpo-HP.580030527\"> </a></td><td>Very severe constriction of peripheral visual field</td></tr><tr><td style=\"white-space:nowrap\">HP:0030551<a name=\"hpo-HP.580030551\"> </a></td><td>Visual acuity light perception with projection</td></tr><tr><td style=\"white-space:nowrap\">HP:0011505<a name=\"hpo-HP.580011505\"> </a></td><td>Cystoid macular edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0010442<a name=\"hpo-HP.580010442\"> </a></td><td>Polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0007642<a name=\"hpo-HP.580007642\"> </a></td><td>Congenital stationary night blindness</td></tr><tr><td style=\"white-space:nowrap\">HP:0009073<a name=\"hpo-HP.580009073\"> </a></td><td>Progressive proximal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003741<a name=\"hpo-HP.580003741\"> </a></td><td>Congenital muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100299<a name=\"hpo-HP.580100299\"> </a></td><td>Muscle fiber inclusion bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0003540<a name=\"hpo-HP.580003540\"> </a></td><td>Impaired platelet aggregation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010489<a name=\"hpo-HP.580010489\"> </a></td><td>Absent palmar crease</td></tr><tr><td style=\"white-space:nowrap\">HP:0009824<a name=\"hpo-HP.580009824\"> </a></td><td>Upper limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002395<a name=\"hpo-HP.580002395\"> </a></td><td>Lower limb hyperreflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001138<a name=\"hpo-HP.580001138\"> </a></td><td>Optic neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0007103<a name=\"hpo-HP.580007103\"> </a></td><td>Hypointensity of cerebral white matter on MRI</td></tr><tr><td style=\"white-space:nowrap\">HP:0003458<a name=\"hpo-HP.580003458\"> </a></td><td>EMG: myopathic abnormalities</td></tr><tr><td style=\"white-space:nowrap\">HP:0002987<a name=\"hpo-HP.580002987\"> </a></td><td>Elbow flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0006466<a name=\"hpo-HP.580006466\"> </a></td><td>Ankle flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0008458<a name=\"hpo-HP.580008458\"> </a></td><td>Progressive congenital scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000473<a name=\"hpo-HP.580000473\"> </a></td><td>Torticollis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011800<a name=\"hpo-HP.580011800\"> </a></td><td>Midface retrusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000597<a name=\"hpo-HP.580000597\"> </a></td><td>Ophthalmoparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005853<a name=\"hpo-HP.580005853\"> </a></td><td>Congenital foot contraction deformities</td></tr><tr><td style=\"white-space:nowrap\">HP:0007002<a name=\"hpo-HP.580007002\"> </a></td><td>Motor axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003327<a name=\"hpo-HP.580003327\"> </a></td><td>Axial muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003306<a name=\"hpo-HP.580003306\"> </a></td><td>Spinal rigidity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002068<a name=\"hpo-HP.580002068\"> </a></td><td>Neuromuscular dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001002<a name=\"hpo-HP.580001002\"> </a></td><td>obsolete Decreased subcutaneous fat</td></tr><tr><td style=\"white-space:nowrap\">HP:0002880<a name=\"hpo-HP.580002880\"> </a></td><td>obsolete Respiratory difficulties</td></tr><tr><td style=\"white-space:nowrap\">HP:0006829<a name=\"hpo-HP.580006829\"> </a></td><td>Severe muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011448<a name=\"hpo-HP.580011448\"> </a></td><td>Ankle clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0003487<a name=\"hpo-HP.580003487\"> </a></td><td>Babinski sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0002378<a name=\"hpo-HP.580002378\"> </a></td><td>Hand tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002747<a name=\"hpo-HP.580002747\"> </a></td><td>Respiratory insufficiency due to muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002579<a name=\"hpo-HP.580002579\"> </a></td><td>Gastrointestinal dysmotility</td></tr><tr><td style=\"white-space:nowrap\">HP:0001041<a name=\"hpo-HP.580001041\"> </a></td><td>Facial erythema</td></tr><tr><td style=\"white-space:nowrap\">HP:0040180<a name=\"hpo-HP.580040180\"> </a></td><td>Hyperkeratosis pilaris</td></tr><tr><td style=\"white-space:nowrap\">HP:0001382<a name=\"hpo-HP.580001382\"> </a></td><td>Joint hypermobility</td></tr><tr><td style=\"white-space:nowrap\">HP:0003722<a name=\"hpo-HP.580003722\"> </a></td><td>Neck flexor weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003323<a name=\"hpo-HP.580003323\"> </a></td><td>Progressive muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002380<a name=\"hpo-HP.580002380\"> </a></td><td>Fasciculations</td></tr><tr><td style=\"white-space:nowrap\">HP:0012785<a name=\"hpo-HP.580012785\"> </a></td><td>Flexion contracture of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0007936<a name=\"hpo-HP.580007936\"> </a></td><td>Restrictive external ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030319<a name=\"hpo-HP.580030319\"> </a></td><td>Weakness of facial musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0008936<a name=\"hpo-HP.580008936\"> </a></td><td>Muscular hypotonia of the trunk</td></tr><tr><td style=\"white-space:nowrap\">HP:0030230<a name=\"hpo-HP.580030230\"> </a></td><td>Central core regions in muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0011471<a name=\"hpo-HP.580011471\"> </a></td><td>Gastrostomy tube feeding in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001290<a name=\"hpo-HP.580001290\"> </a></td><td>Generalized hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002421<a name=\"hpo-HP.580002421\"> </a></td><td>Poor head control</td></tr><tr><td style=\"white-space:nowrap\">HP:0010301<a name=\"hpo-HP.580010301\"> </a></td><td>Spinal dysraphism</td></tr><tr><td style=\"white-space:nowrap\">HP:0004303<a name=\"hpo-HP.580004303\"> </a></td><td>Abnormal muscle fiber morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009046<a name=\"hpo-HP.580009046\"> </a></td><td>Difficulty running</td></tr><tr><td style=\"white-space:nowrap\">HP:0003715<a name=\"hpo-HP.580003715\"> </a></td><td>Myofibrillar myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000467<a name=\"hpo-HP.580000467\"> </a></td><td>Neck muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001999<a name=\"hpo-HP.580001999\"> </a></td><td>Abnormal facial shape</td></tr><tr><td style=\"white-space:nowrap\">HP:0002751<a name=\"hpo-HP.580002751\"> </a></td><td>Kyphoscoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030223<a name=\"hpo-HP.580030223\"> </a></td><td>Perseveration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002344<a name=\"hpo-HP.580002344\"> </a></td><td>Progressive neurologic deterioration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002522<a name=\"hpo-HP.580002522\"> </a></td><td>Areflexia of lower limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0003805<a name=\"hpo-HP.580003805\"> </a></td><td>Rimmed vacuoles</td></tr><tr><td style=\"white-space:nowrap\">HP:0005781<a name=\"hpo-HP.580005781\"> </a></td><td>Contractures of the large joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0040083<a name=\"hpo-HP.580040083\"> </a></td><td>Toe walking</td></tr><tr><td style=\"white-space:nowrap\">HP:0003749<a name=\"hpo-HP.580003749\"> </a></td><td>Pelvic girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0012444<a name=\"hpo-HP.580012444\"> </a></td><td>Brain atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003738<a name=\"hpo-HP.580003738\"> </a></td><td>Exercise-induced myalgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003756<a name=\"hpo-HP.580003756\"> </a></td><td>Skeletal myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002492<a name=\"hpo-HP.580002492\"> </a></td><td>Morphological abnormality of the corticospinal tract</td></tr><tr><td style=\"white-space:nowrap\">HP:0100302<a name=\"hpo-HP.580100302\"> </a></td><td>Muscle fiber tubuloreticular inclusions</td></tr><tr><td style=\"white-space:nowrap\">HP:0006817<a name=\"hpo-HP.580006817\"> </a></td><td>Aplasia/Hypoplasia of the cerebellar vermis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003473<a name=\"hpo-HP.580003473\"> </a></td><td>Fatigable weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002077<a name=\"hpo-HP.580002077\"> </a></td><td>Migraine with aura</td></tr><tr><td style=\"white-space:nowrap\">HP:0100559<a name=\"hpo-HP.580100559\"> </a></td><td>Lower limb asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0002079<a name=\"hpo-HP.580002079\"> </a></td><td>Hypoplasia of the corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002804<a name=\"hpo-HP.580002804\"> </a></td><td>Arthrogryposis multiplex congenita</td></tr><tr><td style=\"white-space:nowrap\">HP:0011623<a name=\"hpo-HP.580011623\"> </a></td><td>Muscular ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002191<a name=\"hpo-HP.580002191\"> </a></td><td>Progressive spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003390<a name=\"hpo-HP.580003390\"> </a></td><td>Sensory axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006986<a name=\"hpo-HP.580006986\"> </a></td><td>Upper limb spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002464<a name=\"hpo-HP.580002464\"> </a></td><td>Spastic dysarthria</td></tr><tr><td style=\"white-space:nowrap\">HP:0001308<a name=\"hpo-HP.580001308\"> </a></td><td>Tongue fasciculations</td></tr><tr><td style=\"white-space:nowrap\">HP:0007010<a name=\"hpo-HP.580007010\"> </a></td><td>Poor fine motor coordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0003737<a name=\"hpo-HP.580003737\"> </a></td><td>Mitochondrial myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0008012<a name=\"hpo-HP.580008012\"> </a></td><td>obsolete Congenital myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008872<a name=\"hpo-HP.580008872\"> </a></td><td>Feeding difficulties in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005750<a name=\"hpo-HP.580005750\"> </a></td><td>Contractures of the joints of the lower limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0009067<a name=\"hpo-HP.580009067\"> </a></td><td>Progressive spinal muscular atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001623<a name=\"hpo-HP.580001623\"> </a></td><td>Breech presentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001374<a name=\"hpo-HP.580001374\"> </a></td><td>Congenital hip dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002359<a name=\"hpo-HP.580002359\"> </a></td><td>Frequent falls</td></tr><tr><td style=\"white-space:nowrap\">HP:0003803<a name=\"hpo-HP.580003803\"> </a></td><td>Type 1 muscle fiber predominance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011410<a name=\"hpo-HP.580011410\"> </a></td><td>Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0008947<a name=\"hpo-HP.580008947\"> </a></td><td>Infantile muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100501<a name=\"hpo-HP.580100501\"> </a></td><td>Recurrent bronchiolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003789<a name=\"hpo-HP.580003789\"> </a></td><td>Minicore myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000544<a name=\"hpo-HP.580000544\"> </a></td><td>External ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001605<a name=\"hpo-HP.580001605\"> </a></td><td>Vocal cord paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003712<a name=\"hpo-HP.580003712\"> </a></td><td>Skeletal muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0012507<a name=\"hpo-HP.580012507\"> </a></td><td>Weakness of orbicularis oculi muscle</td></tr><tr><td style=\"white-space:nowrap\">HP:0009816<a name=\"hpo-HP.580009816\"> </a></td><td>Lower limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0008935<a name=\"hpo-HP.580008935\"> </a></td><td>Generalized neonatal hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003484<a name=\"hpo-HP.580003484\"> </a></td><td>Upper limb muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0008331<a name=\"hpo-HP.580008331\"> </a></td><td>Elevated creatine kinase after exercise</td></tr><tr><td style=\"white-space:nowrap\">HP:0001315<a name=\"hpo-HP.580001315\"> </a></td><td>Reduced tendon reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0012473<a name=\"hpo-HP.580012473\"> </a></td><td>Tongue atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003273<a name=\"hpo-HP.580003273\"> </a></td><td>Hip contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0006380<a name=\"hpo-HP.580006380\"> </a></td><td>Knee flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0003752<a name=\"hpo-HP.580003752\"> </a></td><td>Episodic flaccid weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0100298<a name=\"hpo-HP.580100298\"> </a></td><td>Motheaten muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0003693<a name=\"hpo-HP.580003693\"> </a></td><td>Distal amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002167<a name=\"hpo-HP.580002167\"> </a></td><td>Neurological speech impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0003388<a name=\"hpo-HP.580003388\"> </a></td><td>Easy fatigability</td></tr><tr><td style=\"white-space:nowrap\">HP:0001348<a name=\"hpo-HP.580001348\"> </a></td><td>Brisk reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0003445<a name=\"hpo-HP.580003445\"> </a></td><td>EMG: neuropathic changes</td></tr><tr><td style=\"white-space:nowrap\">HP:0009063<a name=\"hpo-HP.580009063\"> </a></td><td>Progressive distal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003720<a name=\"hpo-HP.580003720\"> </a></td><td>Generalized muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002493<a name=\"hpo-HP.580002493\"> </a></td><td>Upper motor neuron dysfunction</td></tr><tr><td style=\"white-space:nowrap\">HP:0012448<a name=\"hpo-HP.580012448\"> </a></td><td>Delayed myelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0001338<a name=\"hpo-HP.580001338\"> </a></td><td>Partial agenesis of the corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0006879<a name=\"hpo-HP.580006879\"> </a></td><td>Pontocerebellar atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0200101<a name=\"hpo-HP.580200101\"> </a></td><td>Decreased/absent ankle reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0009020<a name=\"hpo-HP.580009020\"> </a></td><td>Exercise-induced muscle fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002067<a name=\"hpo-HP.580002067\"> </a></td><td>Bradykinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012751<a name=\"hpo-HP.580012751\"> </a></td><td>Abnormal basal ganglia MRI signal intensity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003355<a name=\"hpo-HP.580003355\"> </a></td><td>Aminoaciduria</td></tr><tr><td style=\"white-space:nowrap\">HP:0012450<a name=\"hpo-HP.580012450\"> </a></td><td>Chronic constipation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011834<a name=\"hpo-HP.580011834\"> </a></td><td>Moyamoya phenomenon</td></tr><tr><td style=\"white-space:nowrap\">HP:0001297<a name=\"hpo-HP.580001297\"> </a></td><td>Stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0200049<a name=\"hpo-HP.580200049\"> </a></td><td>Upper limb hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008981<a name=\"hpo-HP.580008981\"> </a></td><td>Calf muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006785<a name=\"hpo-HP.580006785\"> </a></td><td>Limb-girdle muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006957<a name=\"hpo-HP.580006957\"> </a></td><td>Loss of ability to walk</td></tr><tr><td style=\"white-space:nowrap\">HP:0030098<a name=\"hpo-HP.580030098\"> </a></td><td>Reduced muscle dystrophin expression</td></tr><tr><td style=\"white-space:nowrap\">HP:0030115<a name=\"hpo-HP.580030115\"> </a></td><td>Reduced muscle fiber dysferlin</td></tr><tr><td style=\"white-space:nowrap\">HP:0002058<a name=\"hpo-HP.580002058\"> </a></td><td>Myopathic facies</td></tr><tr><td style=\"white-space:nowrap\">HP:0007858<a name=\"hpo-HP.580007858\"> </a></td><td>Chorioretinal lacunae</td></tr><tr><td style=\"white-space:nowrap\">HP:0006657<a name=\"hpo-HP.580006657\"> </a></td><td>Hypoplasia of first ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0007165<a name=\"hpo-HP.580007165\"> </a></td><td>Periventricular heterotopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0009779<a name=\"hpo-HP.580009779\"> </a></td><td>3-4 toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010665<a name=\"hpo-HP.580010665\"> </a></td><td>Bilateral coxa valga</td></tr><tr><td style=\"white-space:nowrap\">HP:0007598<a name=\"hpo-HP.580007598\"> </a></td><td>Bilateral single transverse palmar creases</td></tr><tr><td style=\"white-space:nowrap\">HP:0006101<a name=\"hpo-HP.580006101\"> </a></td><td>Finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010511<a name=\"hpo-HP.580010511\"> </a></td><td>Long toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002370<a name=\"hpo-HP.580002370\"> </a></td><td>Poor coordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0000480<a name=\"hpo-HP.580000480\"> </a></td><td>Retinal coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001770<a name=\"hpo-HP.580001770\"> </a></td><td>Toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010851<a name=\"hpo-HP.580010851\"> </a></td><td>EEG with burst suppression</td></tr><tr><td style=\"white-space:nowrap\">HP:0002791<a name=\"hpo-HP.580002791\"> </a></td><td>Hypoventilation</td></tr><tr><td style=\"white-space:nowrap\">HP:0040075<a name=\"hpo-HP.580040075\"> </a></td><td>Hypopituitarism</td></tr><tr><td style=\"white-space:nowrap\">HP:0012506<a name=\"hpo-HP.580012506\"> </a></td><td>Small pituitary gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000538<a name=\"hpo-HP.580000538\"> </a></td><td>Pseudopapilledema</td></tr><tr><td style=\"white-space:nowrap\">HP:0012717<a name=\"hpo-HP.580012717\"> </a></td><td>Severe conductive hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001370<a name=\"hpo-HP.580001370\"> </a></td><td>Rheumatoid arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000016<a name=\"hpo-HP.580000016\"> </a></td><td>Urinary retention</td></tr><tr><td style=\"white-space:nowrap\">HP:0012537<a name=\"hpo-HP.580012537\"> </a></td><td>Food intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011297<a name=\"hpo-HP.580011297\"> </a></td><td>Abnormal digit morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001273<a name=\"hpo-HP.580001273\"> </a></td><td>Abnormal corpus callosum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0030148<a name=\"hpo-HP.580030148\"> </a></td><td>Heart murmur</td></tr><tr><td style=\"white-space:nowrap\">HP:0045018<a name=\"hpo-HP.580045018\"> </a></td><td>Partial duplication of eyebrows</td></tr><tr><td style=\"white-space:nowrap\">HP:0008998<a name=\"hpo-HP.580008998\"> </a></td><td>Pectoralis hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001707<a name=\"hpo-HP.580001707\"> </a></td><td>Abnormal right ventricle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001540<a name=\"hpo-HP.580001540\"> </a></td><td>Diastasis recti</td></tr><tr><td style=\"white-space:nowrap\">HP:0100693<a name=\"hpo-HP.580100693\"> </a></td><td>Iridodonesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002265<a name=\"hpo-HP.580002265\"> </a></td><td>Large fleshy ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001132<a name=\"hpo-HP.580001132\"> </a></td><td>Lens subluxation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004927<a name=\"hpo-HP.580004927\"> </a></td><td>Pulmonary artery dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005619<a name=\"hpo-HP.580005619\"> </a></td><td>Thoracolumbar kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008619<a name=\"hpo-HP.580008619\"> </a></td><td>Bilateral sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001045<a name=\"hpo-HP.580001045\"> </a></td><td>Vitiligo</td></tr><tr><td style=\"white-space:nowrap\">HP:0009124<a name=\"hpo-HP.580009124\"> </a></td><td>Abnormal adipose tissue morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002979<a name=\"hpo-HP.580002979\"> </a></td><td>Bowing of the legs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000455<a name=\"hpo-HP.580000455\"> </a></td><td>Broad nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001007<a name=\"hpo-HP.580001007\"> </a></td><td>Hirsutism</td></tr><tr><td style=\"white-space:nowrap\">HP:0010314<a name=\"hpo-HP.580010314\"> </a></td><td>Premature thelarche</td></tr><tr><td style=\"white-space:nowrap\">HP:0000075<a name=\"hpo-HP.580000075\"> </a></td><td>Renal duplication</td></tr><tr><td style=\"white-space:nowrap\">HP:0000368<a name=\"hpo-HP.580000368\"> </a></td><td>Low-set, posteriorly rotated ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001052<a name=\"hpo-HP.580001052\"> </a></td><td>Nevus flammeus</td></tr><tr><td style=\"white-space:nowrap\">HP:0200048<a name=\"hpo-HP.580200048\"> </a></td><td>Cyanotic episode</td></tr><tr><td style=\"white-space:nowrap\">HP:0001902<a name=\"hpo-HP.580001902\"> </a></td><td>Giant platelets</td></tr><tr><td style=\"white-space:nowrap\">HP:0030043<a name=\"hpo-HP.580030043\"> </a></td><td>Hip subluxation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002938<a name=\"hpo-HP.580002938\"> </a></td><td>Lumbar hyperlordosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030084<a name=\"hpo-HP.580030084\"> </a></td><td>Clinodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005560<a name=\"hpo-HP.580005560\"> </a></td><td>Imbalanced hemoglobin synthesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001539<a name=\"hpo-HP.580001539\"> </a></td><td>Omphalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0009778<a name=\"hpo-HP.580009778\"> </a></td><td>Short thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002277<a name=\"hpo-HP.580002277\"> </a></td><td>Horner syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0011701<a name=\"hpo-HP.580011701\"> </a></td><td>Multifocal atrial tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005274<a name=\"hpo-HP.580005274\"> </a></td><td>Prominent nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001262<a name=\"hpo-HP.580001262\"> </a></td><td>Excessive daytime somnolence</td></tr><tr><td style=\"white-space:nowrap\">HP:0001285<a name=\"hpo-HP.580001285\"> </a></td><td>Spastic tetraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012171<a name=\"hpo-HP.580012171\"> </a></td><td>Stereotypical hand wringing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002518<a name=\"hpo-HP.580002518\"> </a></td><td>Abnormality of the periventricular white matter</td></tr><tr><td style=\"white-space:nowrap\">HP:0005692<a name=\"hpo-HP.580005692\"> </a></td><td>Joint hyperflexibility</td></tr><tr><td style=\"white-space:nowrap\">HP:0007440<a name=\"hpo-HP.580007440\"> </a></td><td>Generalized hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001805<a name=\"hpo-HP.580001805\"> </a></td><td>Onychogryposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011945<a name=\"hpo-HP.580011945\"> </a></td><td>Bronchiolitis obliterans organizing pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003763<a name=\"hpo-HP.580003763\"> </a></td><td>Bruxism</td></tr><tr><td style=\"white-space:nowrap\">HP:0010500<a name=\"hpo-HP.580010500\"> </a></td><td>Hyperextensibility of the knee</td></tr><tr><td style=\"white-space:nowrap\">HP:0040115<a name=\"hpo-HP.580040115\"> </a></td><td>Abnormality of the Eustachian tube</td></tr><tr><td style=\"white-space:nowrap\">HP:0008751<a name=\"hpo-HP.580008751\"> </a></td><td>Laryngeal cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0000403<a name=\"hpo-HP.580000403\"> </a></td><td>Recurrent otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0001787<a name=\"hpo-HP.580001787\"> </a></td><td>Abnormal delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0002571<a name=\"hpo-HP.580002571\"> </a></td><td>Achalasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002615<a name=\"hpo-HP.580002615\"> </a></td><td>Hypotension</td></tr><tr><td style=\"white-space:nowrap\">HP:0003550<a name=\"hpo-HP.580003550\"> </a></td><td>Predominantly lower limb lymphedema</td></tr><tr><td style=\"white-space:nowrap\">HP:0030363<a name=\"hpo-HP.580030363\"> </a></td><td>Primary Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0001727<a name=\"hpo-HP.580001727\"> </a></td><td>Thromboembolic stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0100603<a name=\"hpo-HP.580100603\"> </a></td><td>Toxemia of pregnancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0010836<a name=\"hpo-HP.580010836\"> </a></td><td>Abnormal circulating copper concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0000356<a name=\"hpo-HP.580000356\"> </a></td><td>Abnormality of the outer ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0002197<a name=\"hpo-HP.580002197\"> </a></td><td>Generalized-onset seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011436<a name=\"hpo-HP.580011436\"> </a></td><td>Abnormal maternal serum screening</td></tr><tr><td style=\"white-space:nowrap\">HP:0003517<a name=\"hpo-HP.580003517\"> </a></td><td>Birth length greater than 97th percentile</td></tr><tr><td style=\"white-space:nowrap\">HP:0003561<a name=\"hpo-HP.580003561\"> </a></td><td>Birth length less than 3rd percentile</td></tr><tr><td style=\"white-space:nowrap\">HP:0012188<a name=\"hpo-HP.580012188\"> </a></td><td>Hyperemesis gravidarum</td></tr><tr><td style=\"white-space:nowrap\">HP:0010519<a name=\"hpo-HP.580010519\"> </a></td><td>Increased fetal movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0030244<a name=\"hpo-HP.580030244\"> </a></td><td>Maternal fever in pregnancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0008071<a name=\"hpo-HP.580008071\"> </a></td><td>Maternal hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0100622<a name=\"hpo-HP.580100622\"> </a></td><td>Maternal seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011438<a name=\"hpo-HP.580011438\"> </a></td><td>Maternal teratogenic exposure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001998<a name=\"hpo-HP.580001998\"> </a></td><td>Neonatal hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0040187<a name=\"hpo-HP.580040187\"> </a></td><td>Neonatal sepsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002033<a name=\"hpo-HP.580002033\"> </a></td><td>Poor suck</td></tr><tr><td style=\"white-space:nowrap\">HP:0006579<a name=\"hpo-HP.580006579\"> </a></td><td>Prolonged neonatal jaundice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001724<a name=\"hpo-HP.580001724\"> </a></td><td>obsolete Aortic dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010621<a name=\"hpo-HP.580010621\"> </a></td><td>Cutaneous syndactyly of toes</td></tr><tr><td style=\"white-space:nowrap\">HP:0001880<a name=\"hpo-HP.580001880\"> </a></td><td>Eosinophilia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000162<a name=\"hpo-HP.580000162\"> </a></td><td>Glossoptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100578<a name=\"hpo-HP.580100578\"> </a></td><td>Lipoatrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002562<a name=\"hpo-HP.580002562\"> </a></td><td>Low-set nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0012893<a name=\"hpo-HP.580012893\"> </a></td><td>Neck muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001027<a name=\"hpo-HP.580001027\"> </a></td><td>Soft, doughy skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0100738<a name=\"hpo-HP.580100738\"> </a></td><td>Abnormal eating behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0007328<a name=\"hpo-HP.580007328\"> </a></td><td>Impaired pain sensation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002878<a name=\"hpo-HP.580002878\"> </a></td><td>Respiratory failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001776<a name=\"hpo-HP.580001776\"> </a></td><td>Bilateral talipes equinovarus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001360<a name=\"hpo-HP.580001360\"> </a></td><td>Holoprosencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001973<a name=\"hpo-HP.580001973\"> </a></td><td>Autoimmune thrombocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100749<a name=\"hpo-HP.580100749\"> </a></td><td>Chest pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0012531<a name=\"hpo-HP.580012531\"> </a></td><td>Pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0007585<a name=\"hpo-HP.580007585\"> </a></td><td>Skin fragility with non-scarring blistering</td></tr><tr><td style=\"white-space:nowrap\">HP:0002108<a name=\"hpo-HP.580002108\"> </a></td><td>Spontaneous pneumothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0006562<a name=\"hpo-HP.580006562\"> </a></td><td>Viral hepatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012647<a name=\"hpo-HP.580012647\"> </a></td><td>Abnormal inflammatory response</td></tr><tr><td style=\"white-space:nowrap\">HP:0012088<a name=\"hpo-HP.580012088\"> </a></td><td>Abnormal urinary odor</td></tr><tr><td style=\"white-space:nowrap\">HP:0011458<a name=\"hpo-HP.580011458\"> </a></td><td>Abdominal symptom</td></tr><tr><td style=\"white-space:nowrap\">HP:0002829<a name=\"hpo-HP.580002829\"> </a></td><td>Arthralgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010783<a name=\"hpo-HP.580010783\"> </a></td><td>Erythema</td></tr><tr><td style=\"white-space:nowrap\">HP:0010307<a name=\"hpo-HP.580010307\"> </a></td><td>Stridor</td></tr><tr><td style=\"white-space:nowrap\">HP:0001269<a name=\"hpo-HP.580001269\"> </a></td><td>Hemiparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006532<a name=\"hpo-HP.580006532\"> </a></td><td>Recurrent pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002580<a name=\"hpo-HP.580002580\"> </a></td><td>Volvulus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012387<a name=\"hpo-HP.580012387\"> </a></td><td>Bronchitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001266<a name=\"hpo-HP.580001266\"> </a></td><td>Choreoathetosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001531<a name=\"hpo-HP.580001531\"> </a></td><td>Failure to thrive in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011470<a name=\"hpo-HP.580011470\"> </a></td><td>Nasogastric tube feeding in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001361<a name=\"hpo-HP.580001361\"> </a></td><td>Nystagmus-induced head nodding</td></tr><tr><td style=\"white-space:nowrap\">HP:0001997<a name=\"hpo-HP.580001997\"> </a></td><td>Gout</td></tr><tr><td style=\"white-space:nowrap\">HP:0000965<a name=\"hpo-HP.580000965\"> </a></td><td>Cutis marmorata</td></tr><tr><td style=\"white-space:nowrap\">HP:0010316<a name=\"hpo-HP.580010316\"> </a></td><td>Ebstein anomaly of the tricuspid valve</td></tr><tr><td style=\"white-space:nowrap\">HP:0010543<a name=\"hpo-HP.580010543\"> </a></td><td>Opsoclonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0007704<a name=\"hpo-HP.580007704\"> </a></td><td>Paroxysmal involuntary eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0030364<a name=\"hpo-HP.580030364\"> </a></td><td>Secondary Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0007738<a name=\"hpo-HP.580007738\"> </a></td><td>Uncontrolled eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0030366<a name=\"hpo-HP.580030366\"> </a></td><td>Delivery by Odon device</td></tr><tr><td style=\"white-space:nowrap\">HP:0011411<a name=\"hpo-HP.580011411\"> </a></td><td>Forceps delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0030369<a name=\"hpo-HP.580030369\"> </a></td><td>Induced vaginal delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0005268<a name=\"hpo-HP.580005268\"> </a></td><td>Spontaneous abortion</td></tr><tr><td style=\"white-space:nowrap\">HP:0030365<a name=\"hpo-HP.580030365\"> </a></td><td>Vaginal birth after Caesarian</td></tr><tr><td style=\"white-space:nowrap\">HP:0011412<a name=\"hpo-HP.580011412\"> </a></td><td>Ventouse delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0002572<a name=\"hpo-HP.580002572\"> </a></td><td>Episodic vomiting</td></tr><tr><td style=\"white-space:nowrap\">HP:0030350<a name=\"hpo-HP.580030350\"> </a></td><td>Erythematous papule</td></tr><tr><td style=\"white-space:nowrap\">HP:0001386<a name=\"hpo-HP.580001386\"> </a></td><td>Joint swelling</td></tr><tr><td style=\"white-space:nowrap\">HP:0000147<a name=\"hpo-HP.580000147\"> </a></td><td>Polycystic ovaries</td></tr><tr><td style=\"white-space:nowrap\">HP:0012412<a name=\"hpo-HP.580012412\"> </a></td><td>Premature adrenarche</td></tr><tr><td style=\"white-space:nowrap\">HP:0004411<a name=\"hpo-HP.580004411\"> </a></td><td>Deviated nasal septum</td></tr><tr><td style=\"white-space:nowrap\">HP:0040183<a name=\"hpo-HP.580040183\"> </a></td><td>Encopresis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100507<a name=\"hpo-HP.580100507\"> </a></td><td>Reduced blood folate concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0007011<a name=\"hpo-HP.580007011\"> </a></td><td>Fourth cranial nerve palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000375<a name=\"hpo-HP.580000375\"> </a></td><td>Abnormal cochlea morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009911<a name=\"hpo-HP.580009911\"> </a></td><td>Abnormal temporal bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000081<a name=\"hpo-HP.580000081\"> </a></td><td>Duplicated collecting system</td></tr><tr><td style=\"white-space:nowrap\">HP:0006894<a name=\"hpo-HP.580006894\"> </a></td><td>Hypoplastic olfactory lobes</td></tr><tr><td style=\"white-space:nowrap\">HP:0011380<a name=\"hpo-HP.580011380\"> </a></td><td>Morphological abnormality of the semicircular canal</td></tr><tr><td style=\"white-space:nowrap\">HP:0000110<a name=\"hpo-HP.580000110\"> </a></td><td>Renal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030025<a name=\"hpo-HP.580030025\"> </a></td><td>Auricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0010044<a name=\"hpo-HP.580010044\"> </a></td><td>Short 4th metacarpal</td></tr><tr><td style=\"white-space:nowrap\">HP:0010047<a name=\"hpo-HP.580010047\"> </a></td><td>Short 5th metacarpal</td></tr><tr><td style=\"white-space:nowrap\">HP:0000201<a name=\"hpo-HP.580000201\"> </a></td><td>Pierre-Robin sequence</td></tr><tr><td style=\"white-space:nowrap\">HP:0100837<a name=\"hpo-HP.580100837\"> </a></td><td>Atrophodermia vermiculata</td></tr><tr><td style=\"white-space:nowrap\">HP:0002673<a name=\"hpo-HP.580002673\"> </a></td><td>Coxa valga</td></tr><tr><td style=\"white-space:nowrap\">HP:0001476<a name=\"hpo-HP.580001476\"> </a></td><td>Delayed closure of the anterior fontanelle</td></tr><tr><td style=\"white-space:nowrap\">HP:0011069<a name=\"hpo-HP.580011069\"> </a></td><td>Increased number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009879<a name=\"hpo-HP.580009879\"> </a></td><td>Simplified gyral pattern</td></tr><tr><td style=\"white-space:nowrap\">HP:0006315<a name=\"hpo-HP.580006315\"> </a></td><td>Single median maxillary incisor</td></tr><tr><td style=\"white-space:nowrap\">HP:0001194<a name=\"hpo-HP.580001194\"> </a></td><td>Abnormalities of placenta or umbilical cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0100767<a name=\"hpo-HP.580100767\"> </a></td><td>Abnormal placenta morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0006543<a name=\"hpo-HP.580006543\"> </a></td><td>Cardiorespiratory arrest</td></tr><tr><td style=\"white-space:nowrap\">HP:0003074<a name=\"hpo-HP.580003074\"> </a></td><td>Hyperglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000842<a name=\"hpo-HP.580000842\"> </a></td><td>Hyperinsulinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011951<a name=\"hpo-HP.580011951\"> </a></td><td>Aspiration pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006528<a name=\"hpo-HP.580006528\"> </a></td><td>Chronic lung disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0002383<a name=\"hpo-HP.580002383\"> </a></td><td>Encephalitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000388<a name=\"hpo-HP.580000388\"> </a></td><td>Otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0002530<a name=\"hpo-HP.580002530\"> </a></td><td>Axial dystonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002780<a name=\"hpo-HP.580002780\"> </a></td><td>Bronchomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008755<a name=\"hpo-HP.580008755\"> </a></td><td>Laryngotracheomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000308<a name=\"hpo-HP.580000308\"> </a></td><td>Microretrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002786<a name=\"hpo-HP.580002786\"> </a></td><td>Tracheobronchomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012389<a name=\"hpo-HP.580012389\"> </a></td><td>Appendicular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011323<a name=\"hpo-HP.580011323\"> </a></td><td>Cleft of chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000417<a name=\"hpo-HP.580000417\"> </a></td><td>Slender nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0001863<a name=\"hpo-HP.580001863\"> </a></td><td>Toe clinodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0008386<a name=\"hpo-HP.580008386\"> </a></td><td>Aplasia/Hypoplasia of the nails</td></tr><tr><td style=\"white-space:nowrap\">HP:0006989<a name=\"hpo-HP.580006989\"> </a></td><td>Dysplastic corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0100954<a name=\"hpo-HP.580100954\"> </a></td><td>Open operculum</td></tr><tr><td style=\"white-space:nowrap\">HP:0004482<a name=\"hpo-HP.580004482\"> </a></td><td>Relative macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:3000033<a name=\"hpo-HP.583000033\"> </a></td><td>Abnormal nasopharyngeal adenoid morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009062<a name=\"hpo-HP.580009062\"> </a></td><td>Infantile axial hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002189<a name=\"hpo-HP.580002189\"> </a></td><td>obsolete Excessive daytime sleepiness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002141<a name=\"hpo-HP.580002141\"> </a></td><td>Gait imbalance</td></tr><tr><td style=\"white-space:nowrap\">HP:0012734<a name=\"hpo-HP.580012734\"> </a></td><td>Ketotic hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005968<a name=\"hpo-HP.580005968\"> </a></td><td>Temperature instability</td></tr><tr><td style=\"white-space:nowrap\">HP:0012538<a name=\"hpo-HP.580012538\"> </a></td><td>Gluten intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0000979<a name=\"hpo-HP.580000979\"> </a></td><td>Purpura</td></tr><tr><td style=\"white-space:nowrap\">HP:0001988<a name=\"hpo-HP.580001988\"> </a></td><td>Recurrent hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001488<a name=\"hpo-HP.580001488\"> </a></td><td>Bilateral ptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011229<a name=\"hpo-HP.580011229\"> </a></td><td>Broad eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0004440<a name=\"hpo-HP.580004440\"> </a></td><td>Coronal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004453<a name=\"hpo-HP.580004453\"> </a></td><td>Overfolding of the superior helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0012547<a name=\"hpo-HP.580012547\"> </a></td><td>Abnormal involuntary eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0100814<a name=\"hpo-HP.580100814\"> </a></td><td>Blue nevus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010751<a name=\"hpo-HP.580010751\"> </a></td><td>Dimple chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0007087<a name=\"hpo-HP.580007087\"> </a></td><td>obsolete Involuntary jerking movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0012498<a name=\"hpo-HP.580012498\"> </a></td><td>Nuchal cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0002472<a name=\"hpo-HP.580002472\"> </a></td><td>Small cerebral cortex</td></tr><tr><td style=\"white-space:nowrap\">HP:0100307<a name=\"hpo-HP.580100307\"> </a></td><td>Cerebellar hemisphere hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002151<a name=\"hpo-HP.580002151\"> </a></td><td>Increased serum lactate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001698<a name=\"hpo-HP.580001698\"> </a></td><td>Pericardial effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0006903<a name=\"hpo-HP.580006903\"> </a></td><td>Congenital peripheral neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006895<a name=\"hpo-HP.580006895\"> </a></td><td>Lower limb hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002744<a name=\"hpo-HP.580002744\"> </a></td><td>Bilateral cleft lip and palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0010664<a name=\"hpo-HP.580010664\"> </a></td><td>Fusion of the left and right thalami</td></tr><tr><td style=\"white-space:nowrap\">HP:0000327<a name=\"hpo-HP.580000327\"> </a></td><td>Hypoplasia of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0000474<a name=\"hpo-HP.580000474\"> </a></td><td>Thickened nuchal skin fold</td></tr><tr><td style=\"white-space:nowrap\">HP:0000105<a name=\"hpo-HP.580000105\"> </a></td><td>Enlarged kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0000113<a name=\"hpo-HP.580000113\"> </a></td><td>Polycystic kidney dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000104<a name=\"hpo-HP.580000104\"> </a></td><td>Renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001362<a name=\"hpo-HP.580001362\"> </a></td><td>Calvarial skull defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0008245<a name=\"hpo-HP.580008245\"> </a></td><td>Pituitary hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001552<a name=\"hpo-HP.580001552\"> </a></td><td>Barrel-shaped chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0006297<a name=\"hpo-HP.580006297\"> </a></td><td>Hypoplasia of dental enamel</td></tr><tr><td style=\"white-space:nowrap\">HP:0100023<a name=\"hpo-HP.580100023\"> </a></td><td>Recurrent hand flapping</td></tr><tr><td style=\"white-space:nowrap\">HP:0005518<a name=\"hpo-HP.580005518\"> </a></td><td>Increased mean corpuscular volume</td></tr><tr><td style=\"white-space:nowrap\">HP:0012418<a name=\"hpo-HP.580012418\"> </a></td><td>Hypoxemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100259<a name=\"hpo-HP.580100259\"> </a></td><td>Postaxial polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010814<a name=\"hpo-HP.580010814\"> </a></td><td>Abnormal position of hair whorl</td></tr><tr><td style=\"white-space:nowrap\">HP:0003764<a name=\"hpo-HP.580003764\"> </a></td><td>Nevus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000445<a name=\"hpo-HP.580000445\"> </a></td><td>Wide nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0010677<a name=\"hpo-HP.580010677\"> </a></td><td>Enuresis nocturna</td></tr><tr><td style=\"white-space:nowrap\">HP:0001510<a name=\"hpo-HP.580001510\"> </a></td><td>Growth delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0012428<a name=\"hpo-HP.580012428\"> </a></td><td>Prominent calcaneus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012471<a name=\"hpo-HP.580012471\"> </a></td><td>Thick vermilion border</td></tr><tr><td style=\"white-space:nowrap\">HP:0007110<a name=\"hpo-HP.580007110\"> </a></td><td>Central hypoventilation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010614<a name=\"hpo-HP.580010614\"> </a></td><td>Fibroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001034<a name=\"hpo-HP.580001034\"> </a></td><td>Hypermelanotic macule</td></tr><tr><td style=\"white-space:nowrap\">HP:0011365<a name=\"hpo-HP.580011365\"> </a></td><td>Patchy hypopigmentation of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0001920<a name=\"hpo-HP.580001920\"> </a></td><td>Renal artery stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002828<a name=\"hpo-HP.580002828\"> </a></td><td>Multiple joint contractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0002144<a name=\"hpo-HP.580002144\"> </a></td><td>Tethered cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0010964<a name=\"hpo-HP.580010964\"> </a></td><td>Abnormal circulating long-chain fatty-acid concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0010536<a name=\"hpo-HP.580010536\"> </a></td><td>Central sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0011262<a name=\"hpo-HP.580011262\"> </a></td><td>Crimped helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0040079<a name=\"hpo-HP.580040079\"> </a></td><td>Irregular dentition</td></tr><tr><td style=\"white-space:nowrap\">HP:0011481<a name=\"hpo-HP.580011481\"> </a></td><td>Abnormal lacrimal duct morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000220<a name=\"hpo-HP.580000220\"> </a></td><td>Velopharyngeal insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002153<a name=\"hpo-HP.580002153\"> </a></td><td>Hyperkalemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002148<a name=\"hpo-HP.580002148\"> </a></td><td>Hypophosphatemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012621<a name=\"hpo-HP.580012621\"> </a></td><td>Persistent cloaca</td></tr><tr><td style=\"white-space:nowrap\">HP:0000867<a name=\"hpo-HP.580000867\"> </a></td><td>Secondary hyperparathyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0003762<a name=\"hpo-HP.580003762\"> </a></td><td>Uterus didelphys</td></tr><tr><td style=\"white-space:nowrap\">HP:0100512<a name=\"hpo-HP.580100512\"> </a></td><td>Low levels of vitamin D</td></tr><tr><td style=\"white-space:nowrap\">HP:0012156<a name=\"hpo-HP.580012156\"> </a></td><td>Hemophagocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008209<a name=\"hpo-HP.580008209\"> </a></td><td>Premature ovarian insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0004349<a name=\"hpo-HP.580004349\"> </a></td><td>Reduced bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0001924<a name=\"hpo-HP.580001924\"> </a></td><td>Sideroblastic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011703<a name=\"hpo-HP.580011703\"> </a></td><td>Sinus tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010609<a name=\"hpo-HP.580010609\"> </a></td><td>Skin tags</td></tr><tr><td style=\"white-space:nowrap\">HP:0002725<a name=\"hpo-HP.580002725\"> </a></td><td>Systemic lupus erythematosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0003193<a name=\"hpo-HP.580003193\"> </a></td><td>Allergic rhinitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006896<a name=\"hpo-HP.580006896\"> </a></td><td>Hypnopompic hallucinations</td></tr><tr><td style=\"white-space:nowrap\">HP:0002524<a name=\"hpo-HP.580002524\"> </a></td><td>Cataplexy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005227<a name=\"hpo-HP.580005227\"> </a></td><td>Adenomatous colonic polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012173<a name=\"hpo-HP.580012173\"> </a></td><td>Orthostatic tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001271<a name=\"hpo-HP.580001271\"> </a></td><td>Polyneuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0009120<a name=\"hpo-HP.580009120\"> </a></td><td>Aplasia/Hypoplasia involving the sinuses</td></tr><tr><td style=\"white-space:nowrap\">HP:0000625<a name=\"hpo-HP.580000625\"> </a></td><td>Eyelid coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0009754<a name=\"hpo-HP.580009754\"> </a></td><td>Fibrous syngnathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012478<a name=\"hpo-HP.580012478\"> </a></td><td>Temporomandibular joint ankylosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001233<a name=\"hpo-HP.580001233\"> </a></td><td>2-3 finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000811<a name=\"hpo-HP.580000811\"> </a></td><td>Abnormal external genitalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005120<a name=\"hpo-HP.580005120\"> </a></td><td>Abnormal cardiac atrium morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008388<a name=\"hpo-HP.580008388\"> </a></td><td>Abnormal toenail morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011467<a name=\"hpo-HP.580011467\"> </a></td><td>Absent gallbladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0010760<a name=\"hpo-HP.580010760\"> </a></td><td>Absent toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001545<a name=\"hpo-HP.580001545\"> </a></td><td>Anteriorly placed anus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001640<a name=\"hpo-HP.580001640\"> </a></td><td>Cardiomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002990<a name=\"hpo-HP.580002990\"> </a></td><td>Fibular aplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004443<a name=\"hpo-HP.580004443\"> </a></td><td>Lambdoidal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008569<a name=\"hpo-HP.580008569\"> </a></td><td>Microtia, second degree</td></tr><tr><td style=\"white-space:nowrap\">HP:0006277<a name=\"hpo-HP.580006277\"> </a></td><td>Pancreatic hyperplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010445<a name=\"hpo-HP.580010445\"> </a></td><td>Primum atrial septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0011640<a name=\"hpo-HP.580011640\"> </a></td><td>Single coronary artery origin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011608<a name=\"hpo-HP.580011608\"> </a></td><td>Type II truncus arteriosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0011327<a name=\"hpo-HP.580011327\"> </a></td><td>Posterior plagiocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0007655<a name=\"hpo-HP.580007655\"> </a></td><td>Eversion of lateral third of lower eyelids</td></tr><tr><td style=\"white-space:nowrap\">HP:0010747<a name=\"hpo-HP.580010747\"> </a></td><td>Medial flaring of the eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0005957<a name=\"hpo-HP.580005957\"> </a></td><td>Breathing dysregulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000992<a name=\"hpo-HP.580000992\"> </a></td><td>Cutaneous photosensitivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0011995<a name=\"hpo-HP.580011995\"> </a></td><td>Atrial septal dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000377<a name=\"hpo-HP.580000377\"> </a></td><td>Abnormality of the pinna</td></tr><tr><td style=\"white-space:nowrap\">HP:0011266<a name=\"hpo-HP.580011266\"> </a></td><td>Microtia, first degree</td></tr><tr><td style=\"white-space:nowrap\">HP:0012650<a name=\"hpo-HP.580012650\"> </a></td><td>Perisylvian polymicrogyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0004970<a name=\"hpo-HP.580004970\"> </a></td><td>Ascending tubular aorta aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0008348<a name=\"hpo-HP.580008348\"> </a></td><td>Decreased circulating IgG2 level</td></tr><tr><td style=\"white-space:nowrap\">HP:0012115<a name=\"hpo-HP.580012115\"> </a></td><td>Hepatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006979<a name=\"hpo-HP.580006979\"> </a></td><td>Sleep-wake cycle disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0008587<a name=\"hpo-HP.580008587\"> </a></td><td>Mild neurosensory hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0006097<a name=\"hpo-HP.580006097\"> </a></td><td>3-4 finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005263<a name=\"hpo-HP.580005263\"> </a></td><td>Gastritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0200043<a name=\"hpo-HP.580200043\"> </a></td><td>Verrucae</td></tr><tr><td style=\"white-space:nowrap\">HP:0009600<a name=\"hpo-HP.580009600\"> </a></td><td>Flexion contracture of thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0010818<a name=\"hpo-HP.580010818\"> </a></td><td>Generalized tonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0002599<a name=\"hpo-HP.580002599\"> </a></td><td>Head titubation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002090<a name=\"hpo-HP.580002090\"> </a></td><td>Pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030423<a name=\"hpo-HP.580030423\"> </a></td><td>Splenic cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0030187<a name=\"hpo-HP.580030187\"> </a></td><td>Titubation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002375<a name=\"hpo-HP.580002375\"> </a></td><td>Hypokinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007166<a name=\"hpo-HP.580007166\"> </a></td><td>Paroxysmal dyskinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003077<a name=\"hpo-HP.580003077\"> </a></td><td>Hyperlipidemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000017<a name=\"hpo-HP.580000017\"> </a></td><td>Nocturia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100555<a name=\"hpo-HP.580100555\"> </a></td><td>Asymmetric growth</td></tr><tr><td style=\"white-space:nowrap\">HP:0011847<a name=\"hpo-HP.580011847\"> </a></td><td>Giant cell tumor of bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0000112<a name=\"hpo-HP.580000112\"> </a></td><td>Nephropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000246<a name=\"hpo-HP.580000246\"> </a></td><td>Sinusitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001012<a name=\"hpo-HP.580001012\"> </a></td><td>Multiple lipomas</td></tr><tr><td style=\"white-space:nowrap\">HP:0000851<a name=\"hpo-HP.580000851\"> </a></td><td>Congenital hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0002345<a name=\"hpo-HP.580002345\"> </a></td><td>Action tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002677<a name=\"hpo-HP.580002677\"> </a></td><td>Small foramen magnum</td></tr><tr><td style=\"white-space:nowrap\">HP:0011947<a name=\"hpo-HP.580011947\"> </a></td><td>Respiratory tract infection</td></tr><tr><td style=\"white-space:nowrap\">HP:0012151<a name=\"hpo-HP.580012151\"> </a></td><td>Hemothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0005988<a name=\"hpo-HP.580005988\"> </a></td><td>Congenital muscular torticollis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002329<a name=\"hpo-HP.580002329\"> </a></td><td>Drowsiness</td></tr><tr><td style=\"white-space:nowrap\">HP:0012395<a name=\"hpo-HP.580012395\"> </a></td><td>Seasonal allergy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011679<a name=\"hpo-HP.580011679\"> </a></td><td>Tetralogy of Fallot with pulmonary stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001864<a name=\"hpo-HP.580001864\"> </a></td><td>Clinodactyly of the 5th toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0006934<a name=\"hpo-HP.580006934\"> </a></td><td>Congenital nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0100355<a name=\"hpo-HP.580100355\"> </a></td><td>Contractures of the distal interphalangeal joint of the 5th toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0007894<a name=\"hpo-HP.580007894\"> </a></td><td>Hypopigmentation of the fundus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012377<a name=\"hpo-HP.580012377\"> </a></td><td>Hemianopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002354<a name=\"hpo-HP.580002354\"> </a></td><td>Memory impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000872<a name=\"hpo-HP.580000872\"> </a></td><td>Hashimoto thyroiditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002519<a name=\"hpo-HP.580002519\"> </a></td><td>Hypnagogic hallucinations</td></tr><tr><td style=\"white-space:nowrap\">HP:0010647<a name=\"hpo-HP.580010647\"> </a></td><td>Abnormal elasticity of skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0002592<a name=\"hpo-HP.580002592\"> </a></td><td>Gastric ulcer</td></tr><tr><td style=\"white-space:nowrap\">HP:0004938<a name=\"hpo-HP.580004938\"> </a></td><td>Tortuous cerebral arteries</td></tr><tr><td style=\"white-space:nowrap\">HP:0004948<a name=\"hpo-HP.580004948\"> </a></td><td>Vascular tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002516<a name=\"hpo-HP.580002516\"> </a></td><td>Increased intracranial pressure</td></tr><tr><td style=\"white-space:nowrap\">HP:0006460<a name=\"hpo-HP.580006460\"> </a></td><td>Increased laxity of ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0002317<a name=\"hpo-HP.580002317\"> </a></td><td>Unsteady gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0000182<a name=\"hpo-HP.580000182\"> </a></td><td>Movement abnormality of the tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0009887<a name=\"hpo-HP.580009887\"> </a></td><td>Abnormality of hair pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005824<a name=\"hpo-HP.580005824\"> </a></td><td>Clinodactyly of the 2nd toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002212<a name=\"hpo-HP.580002212\"> </a></td><td>Curly hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0009803<a name=\"hpo-HP.580009803\"> </a></td><td>Short phalanx of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0000572<a name=\"hpo-HP.580000572\"> </a></td><td>Visual loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0005216<a name=\"hpo-HP.580005216\"> </a></td><td>Impaired mastication</td></tr><tr><td style=\"white-space:nowrap\">HP:0000619<a name=\"hpo-HP.580000619\"> </a></td><td>Impaired convergence</td></tr><tr><td style=\"white-space:nowrap\">HP:0002403<a name=\"hpo-HP.580002403\"> </a></td><td>Positive Romberg sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0008744<a name=\"hpo-HP.580008744\"> </a></td><td>Abnormal aryepiglottic fold morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002374<a name=\"hpo-HP.580002374\"> </a></td><td>Diminished movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0008277<a name=\"hpo-HP.580008277\"> </a></td><td>Abnormal blood zinc concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0012781<a name=\"hpo-HP.580012781\"> </a></td><td>Mid-frequency hearing loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0100758<a name=\"hpo-HP.580100758\"> </a></td><td>Gangrene</td></tr><tr><td style=\"white-space:nowrap\">HP:0003256<a name=\"hpo-HP.580003256\"> </a></td><td>Abnormality of the coagulation cascade</td></tr><tr><td style=\"white-space:nowrap\">HP:0004387<a name=\"hpo-HP.580004387\"> </a></td><td>Enterocolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011029<a name=\"hpo-HP.580011029\"> </a></td><td>Internal hemorrhage</td></tr><tr><td style=\"white-space:nowrap\">HP:0011649<a name=\"hpo-HP.580011649\"> </a></td><td>Patent ductus arteriosus after premature birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0012050<a name=\"hpo-HP.580012050\"> </a></td><td>Anasarca</td></tr><tr><td style=\"white-space:nowrap\">HP:0001683<a name=\"hpo-HP.580001683\"> </a></td><td>Ectopia cordis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011682<a name=\"hpo-HP.580011682\"> </a></td><td>Perimembranous ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0010624<a name=\"hpo-HP.580010624\"> </a></td><td>Aplastic/hypoplastic toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002705<a name=\"hpo-HP.580002705\"> </a></td><td>High, narrow palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0011340<a name=\"hpo-HP.580011340\"> </a></td><td>Incomplete cleft of the upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0011613<a name=\"hpo-HP.580011613\"> </a></td><td>Interrupted aortic arch type B</td></tr><tr><td style=\"white-space:nowrap\">HP:0006167<a name=\"hpo-HP.580006167\"> </a></td><td>Prominent proximal interphalangeal joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0002918<a name=\"hpo-HP.580002918\"> </a></td><td>Hypermagnesemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011937<a name=\"hpo-HP.580011937\"> </a></td><td>Hypoplastic fifth toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0001067<a name=\"hpo-HP.580001067\"> </a></td><td>Neurofibromas</td></tr><tr><td style=\"white-space:nowrap\">HP:0011403<a name=\"hpo-HP.580011403\"> </a></td><td>Abnormal umbilical cord blood vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0003316<a name=\"hpo-HP.580003316\"> </a></td><td>Butterfly vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0002247<a name=\"hpo-HP.580002247\"> </a></td><td>Duodenal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008439<a name=\"hpo-HP.580008439\"> </a></td><td>Lumbar hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0011599<a name=\"hpo-HP.580011599\"> </a></td><td>Mesocardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008467<a name=\"hpo-HP.580008467\"> </a></td><td>Thoracic hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0004626<a name=\"hpo-HP.580004626\"> </a></td><td>Lumbar scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006808<a name=\"hpo-HP.580006808\"> </a></td><td>Cerebral hypomyelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0002926<a name=\"hpo-HP.580002926\"> </a></td><td>Abnormality of thyroid physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0007970<a name=\"hpo-HP.580007970\"> </a></td><td>Congenital ptosis</td></tr></table></div>" + }, + "url" : "http://purl.obolibrary.org/obo/hp.owl", + "version" : "0.2.0", + "name" : "HPO", + "title" : "Human Phenotype Ontology", + "status" : "draft", + "experimental" : false, + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "The Human Phenotype Ontology (HPO) provides a standardized vocabulary of phenotypic abnormalities encountered in human disease. Please see license of HPO at http://www.human-phenotype-ontology.org", + "valueSet" : "http://fhir.ncpi-project-forge.io/ValueSet/phenotype-codes", + "hierarchyMeaning" : "is-a", + "compositional" : false, + "versionNeeded" : false, + "content" : "fragment", + "count" : 1880, + "filter" : [{ + "code" : "root", + "operator" : ["="], + "value" : "True or false." + }, + { + "code" : "deprecated", + "operator" : ["="], + "value" : "True or false." + }, + { + "code" : "imported", + "operator" : ["="], + "value" : "True or false" + }], + "property" : [{ + "code" : "parent", + "description" : "Parent codes.", + "type" : "code" + }, + { + "code" : "imported", + "description" : "Indicates if the concept is imported from another code system.", + "type" : "boolean" + }, + { + "code" : "root", + "description" : "Indicates if this concept is a root concept (i.e. Thing is equivalent or a direct parent)", + "type" : "boolean" + }, + { + "code" : "deprecated", + "description" : "Indicates if this concept is deprecated.", + "type" : "boolean" + }], + "concept" : [{ + "code" : "HP:0000365", + "display" : "Hearing impairment" + }, + { + "code" : "HP:0002564", + "display" : "obsolete Malformation of the heart and great vessels" + }, + { + "code" : "HP:0001028", + "display" : "Hemangioma" + }, + { + "code" : "HP:0000476", + "display" : "Cystic hygroma" + }, + { + "code" : "HP:0000568", + "display" : "Microphthalmia" + }, + { + "code" : "HP:0000518", + "display" : "Cataract" + }, + { + "code" : "HP:0000612", + "display" : "Iris coloboma" + }, + { + "code" : "HP:0000567", + "display" : "Chorioretinal coloboma" + }, + { + "code" : "HP:0000316", + "display" : "Hypertelorism" + }, + { + "code" : "HP:0000482", + "display" : "Microcornea" + }, + { + "code" : "HP:0000588", + "display" : "Optic nerve coloboma" + }, + { + "code" : "HP:0004426", + "display" : "Abnormality of the cheek" + }, + { + "code" : "HP:0009125", + "display" : "Lipodystrophy" + }, + { + "code" : "HP:0002023", + "display" : "Anal atresia" + }, + { + "code" : "HP:0003468", + "display" : "Abnormal vertebral morphology" + }, + { + "code" : "HP:0000545", + "display" : "Myopia" + }, + { + "code" : "HP:0000122", + "display" : "Unilateral renal agenesis" + }, + { + "code" : "HP:0002143", + "display" : "Abnormality of the spinal cord" + }, + { + "code" : "HP:0003508", + "display" : "Proportionate short stature" + }, + { + "code" : "HP:0000271", + "display" : "Abnormality of the face" + }, + { + "code" : "HP:0000637", + "display" : "Long palpebral fissure" + }, + { + "code" : "HP:0000492", + "display" : "Abnormal eyelid morphology" + }, + { + "code" : "HP:0000389", + "display" : "Chronic otitis media" + }, + { + "code" : "HP:0000400", + "display" : "Macrotia" + }, + { + "code" : "HP:0000405", + "display" : "Conductive hearing impairment" + }, + { + "code" : "HP:0012712", + "display" : "Mild hearing impairment" + }, + { + "code" : "HP:0005280", + "display" : "Depressed nasal bridge" + }, + { + "code" : "HP:0000431", + "display" : "Wide nasal bridge" + }, + { + "code" : "HP:0000319", + "display" : "Smooth philtrum" + }, + { + "code" : "HP:0000175", + "display" : "Cleft palate" + }, + { + "code" : "HP:0001611", + "display" : "Nasal speech" + }, + { + "code" : "HP:0002099", + "display" : "Asthma" + }, + { + "code" : "HP:0001397", + "display" : "Hepatic steatosis" + }, + { + "code" : "HP:0001081", + "display" : "Cholelithiasis" + }, + { + "code" : "HP:0002650", + "display" : "Scoliosis" + }, + { + "code" : "HP:0001212", + "display" : "Prominent fingertip pads" + }, + { + "code" : "HP:0001328", + "display" : "Specific learning disability" + }, + { + "code" : "HP:0000824", + "display" : "Growth hormone deficiency" + }, + { + "code" : "HP:0002607", + "display" : "Bowel incontinence" + }, + { + "code" : "HP:0100731", + "display" : "Transverse facial cleft" + }, + { + "code" : "HP:0000528", + "display" : "Anophthalmia" + }, + { + "code" : "HP:0000601", + "display" : "Hypotelorism" + }, + { + "code" : "HP:0000369", + "display" : "Low-set ears" + }, + { + "code" : "HP:0001274", + "display" : "Agenesis of corpus callosum" + }, + { + "code" : "HP:0002084", + "display" : "Encephalocele" + }, + { + "code" : "HP:0007033", + "display" : "Cerebellar dysplasia" + }, + { + "code" : "HP:0100336", + "display" : "Bilateral cleft lip" + }, + { + "code" : "HP:0100337", + "display" : "Bilateral cleft palate" + }, + { + "code" : "HP:0001511", + "display" : "Intrauterine growth retardation" + }, + { + "code" : "HP:0011451", + "display" : "Congenital microcephaly" + }, + { + "code" : "HP:0000324", + "display" : "Facial asymmetry" + }, + { + "code" : "HP:0000581", + "display" : "Blepharophimosis" + }, + { + "code" : "HP:0000508", + "display" : "Ptosis" + }, + { + "code" : "HP:0008551", + "display" : "Microtia" + }, + { + "code" : "HP:0001631", + "display" : "Atrial septal defect" + }, + { + "code" : "HP:0000085", + "display" : "Horseshoe kidney" + }, + { + "code" : "HP:0011927", + "display" : "Short digit" + }, + { + "code" : "HP:0001156", + "display" : "Brachydactyly" + }, + { + "code" : "HP:0002066", + "display" : "Gait ataxia" + }, + { + "code" : "HP:0001250", + "display" : "Seizure" + }, + { + "code" : "HP:0001263", + "display" : "Global developmental delay" + }, + { + "code" : "HP:0001562", + "display" : "Oligohydramnios" + }, + { + "code" : "HP:0001195", + "display" : "Single umbilical artery" + }, + { + "code" : "HP:0006349", + "display" : "Agenesis of permanent teeth" + }, + { + "code" : "HP:0000668", + "display" : "Hypodontia" + }, + { + "code" : "HP:0000677", + "display" : "Oligodontia" + }, + { + "code" : "HP:0001252", + "display" : "Muscular hypotonia" + }, + { + "code" : "HP:0003429", + "display" : "CNS hypomyelination" + }, + { + "code" : "HP:0010864", + "display" : "Intellectual disability, severe" + }, + { + "code" : "HP:0004325", + "display" : "Decreased body weight" + }, + { + "code" : "HP:0000666", + "display" : "Horizontal nystagmus" + }, + { + "code" : "HP:0000218", + "display" : "High palate" + }, + { + "code" : "HP:0010809", + "display" : "Broad uvula" + }, + { + "code" : "HP:0000767", + "display" : "Pectus excavatum" + }, + { + "code" : "HP:0003691", + "display" : "Scapular winging" + }, + { + "code" : "HP:0002616", + "display" : "Aortic root aneurysm" + }, + { + "code" : "HP:0001601", + "display" : "Laryngomalacia" + }, + { + "code" : "HP:0002021", + "display" : "Pyloric stenosis" + }, + { + "code" : "HP:0001388", + "display" : "Joint laxity" + }, + { + "code" : "HP:0001187", + "display" : "Hyperextensibility of the finger joints" + }, + { + "code" : "HP:0000741", + "display" : "Apathy" + }, + { + "code" : "HP:0000817", + "display" : "Poor eye contact" + }, + { + "code" : "HP:0000821", + "display" : "Hypothyroidism" + }, + { + "code" : "HP:0000002", + "display" : "Abnormality of body height" + }, + { + "code" : "HP:0000079", + "display" : "Abnormality of the urinary system" + }, + { + "code" : "HP:0000164", + "display" : "Abnormality of the dentition" + }, + { + "code" : "HP:0000364", + "display" : "Hearing abnormality" + }, + { + "code" : "HP:0000366", + "display" : "Abnormality of the nose" + }, + { + "code" : "HP:0000464", + "display" : "Abnormality of the neck" + }, + { + "code" : "HP:0000707", + "display" : "Abnormality of the nervous system" + }, + { + "code" : "HP:0000708", + "display" : "Behavioral abnormality" + }, + { + "code" : "HP:0000769", + "display" : "Abnormality of the breast" + }, + { + "code" : "HP:0000772", + "display" : "Abnormality of the ribs" + }, + { + "code" : "HP:0000775", + "display" : "Abnormality of the diaphragm" + }, + { + "code" : "HP:0000889", + "display" : "Abnormality of the clavicle" + }, + { + "code" : "HP:0000925", + "display" : "Abnormality of the vertebral column" + }, + { + "code" : "HP:0001080", + "display" : "Biliary tract abnormality" + }, + { + "code" : "HP:0001392", + "display" : "Abnormality of the liver" + }, + { + "code" : "HP:0001438", + "display" : "Abnormal abdomen morphology" + }, + { + "code" : "HP:0001608", + "display" : "Abnormality of the voice" + }, + { + "code" : "HP:0001627", + "display" : "Abnormal heart morphology" + }, + { + "code" : "HP:0001732", + "display" : "Abnormality of the pancreas" + }, + { + "code" : "HP:0001739", + "display" : "Abnormality of the nasopharynx" + }, + { + "code" : "HP:0001743", + "display" : "Abnormality of the spleen" + }, + { + "code" : "HP:0001760", + "display" : "Abnormal foot morphology" + }, + { + "code" : "HP:0001871", + "display" : "Abnormality of blood and blood-forming tissues" + }, + { + "code" : "HP:0002031", + "display" : "Abnormal esophagus morphology" + }, + { + "code" : "HP:0002244", + "display" : "Abnormality of the small intestine" + }, + { + "code" : "HP:0002246", + "display" : "Abnormality of the duodenum" + }, + { + "code" : "HP:0002250", + "display" : "Abnormal large intestine morphology" + }, + { + "code" : "HP:0002644", + "display" : "Abnormality of pelvic girdle bone morphology" + }, + { + "code" : "HP:0002664", + "display" : "Neoplasm" + }, + { + "code" : "HP:0002715", + "display" : "Abnormality of the immune system" + }, + { + "code" : "HP:0002814", + "display" : "Abnormality of the lower limb" + }, + { + "code" : "HP:0002817", + "display" : "Abnormality of the upper limb" + }, + { + "code" : "HP:0005483", + "display" : "Abnormal epiglottis morphology" + }, + { + "code" : "HP:0008777", + "display" : "Abnormal vocal cord morphology" + }, + { + "code" : "HP:0011844", + "display" : "Abnormal appendicular skeleton morphology" + }, + { + "code" : "HP:0012732", + "display" : "Anorectal anomaly" + }, + { + "code" : "HP:0001508", + "display" : "Failure to thrive" + }, + { + "code" : "HP:0002902", + "display" : "Hyponatremia" + }, + { + "code" : "HP:0012236", + "display" : "Elevated sweat chloride" + }, + { + "code" : "HP:0000347", + "display" : "Micrognathia" + }, + { + "code" : "HP:0000926", + "display" : "Platyspondyly" + }, + { + "code" : "HP:0001371", + "display" : "Flexion contracture" + }, + { + "code" : "HP:0001875", + "display" : "Neutropenia" + }, + { + "code" : "HP:0001888", + "display" : "Lymphopenia" + }, + { + "code" : "HP:0002857", + "display" : "Genu valgum" + }, + { + "code" : "HP:0002986", + "display" : "Radial bowing" + }, + { + "code" : "HP:0003015", + "display" : "Flared metaphysis" + }, + { + "code" : "HP:0003025", + "display" : "Metaphyseal irregularity" + }, + { + "code" : "HP:0003097", + "display" : "Short femur" + }, + { + "code" : "HP:0003300", + "display" : "Ovoid vertebral bodies" + }, + { + "code" : "HP:0003307", + "display" : "Hyperlordosis" + }, + { + "code" : "HP:0004209", + "display" : "Clinodactyly of the 5th finger" + }, + { + "code" : "HP:0004322", + "display" : "Short stature" + }, + { + "code" : "HP:0005792", + "display" : "Short humerus" + }, + { + "code" : "HP:0006248", + "display" : "Limited wrist movement" + }, + { + "code" : "HP:0000944", + "display" : "Abnormality of the metaphysis" + }, + { + "code" : "HP:0011921", + "display" : "Exudative pleural effusion" + }, + { + "code" : "HP:0003043", + "display" : "Abnormality of the shoulder" + }, + { + "code" : "HP:0000290", + "display" : "Abnormality of the forehead" + }, + { + "code" : "HP:0005288", + "display" : "Abnormality of the nares" + }, + { + "code" : "HP:0000234", + "display" : "Abnormality of the head" + }, + { + "code" : "HP:0004323", + "display" : "Abnormality of body weight" + }, + { + "code" : "HP:0000483", + "display" : "Astigmatism" + }, + { + "code" : "HP:0011003", + "display" : "High myopia" + }, + { + "code" : "HP:0000470", + "display" : "Short neck" + }, + { + "code" : "HP:0030044", + "display" : "Flexion contracture of digit" + }, + { + "code" : "HP:0100871", + "display" : "Abnormality of the palm" + }, + { + "code" : "HP:0004334", + "display" : "Dermal atrophy" + }, + { + "code" : "HP:0001845", + "display" : "Overlapping toe" + }, + { + "code" : "HP:0000496", + "display" : "Abnormality of eye movement" + }, + { + "code" : "HP:0001780", + "display" : "Abnormality of toe" + }, + { + "code" : "HP:0001626", + "display" : "Abnormality of the cardiovascular system" + }, + { + "code" : "HP:0002086", + "display" : "Abnormality of the respiratory system" + }, + { + "code" : "HP:0000818", + "display" : "Abnormality of the endocrine system" + }, + { + "code" : "HP:0012372", + "display" : "Abnormal eye morphology" + }, + { + "code" : "HP:0009473", + "display" : "Joint contracture of the hand" + }, + { + "code" : "HP:0003199", + "display" : "Decreased muscle mass" + }, + { + "code" : "HP:0003202", + "display" : "Skeletal muscle atrophy" + }, + { + "code" : "HP:0003551", + "display" : "Difficulty climbing stairs" + }, + { + "code" : "HP:0002355", + "display" : "Difficulty walking" + }, + { + "code" : "HP:0003546", + "display" : "Exercise intolerance" + }, + { + "code" : "HP:0003325", + "display" : "Limb-girdle muscle weakness" + }, + { + "code" : "HP:0003701", + "display" : "Proximal muscle weakness" + }, + { + "code" : "HP:0003547", + "display" : "Shoulder girdle muscle weakness" + }, + { + "code" : "HP:0007340", + "display" : "Lower limb muscle weakness" + }, + { + "code" : "HP:0002168", + "display" : "Scanning speech" + }, + { + "code" : "HP:0001265", + "display" : "Hyporeflexia" + }, + { + "code" : "HP:0001284", + "display" : "Areflexia" + }, + { + "code" : "HP:0003477", + "display" : "Peripheral axonal neuropathy" + }, + { + "code" : "HP:0000924", + "display" : "Abnormality of the skeletal system" + }, + { + "code" : "HP:0001291", + "display" : "Abnormal cranial nerve morphology" + }, + { + "code" : "HP:0003687", + "display" : "Centrally nucleated skeletal muscle fibers" + }, + { + "code" : "HP:0001324", + "display" : "Muscle weakness" + }, + { + "code" : "HP:0002515", + "display" : "Waddling gait" + }, + { + "code" : "HP:0100280", + "display" : "Crohn's disease" + }, + { + "code" : "HP:0002631", + "display" : "obsolete Dilatation of ascending aorta" + }, + { + "code" : "HP:0100026", + "display" : "Arteriovenous malformation" + }, + { + "code" : "HP:0002637", + "display" : "Cerebral ischemia" + }, + { + "code" : "HP:0002619", + "display" : "Varicose veins" + }, + { + "code" : "HP:0001159", + "display" : "Syndactyly" + }, + { + "code" : "HP:0002069", + "display" : "Bilateral tonic-clonic seizure" + }, + { + "code" : "HP:0000977", + "display" : "Soft skin" + }, + { + "code" : "HP:0010648", + "display" : "Dermal translucency" + }, + { + "code" : "HP:0000978", + "display" : "Bruising susceptibility" + }, + { + "code" : "HP:0001956", + "display" : "Truncal obesity" + }, + { + "code" : "HP:0000189", + "display" : "Narrow palate" + }, + { + "code" : "HP:0000678", + "display" : "Dental crowding" + }, + { + "code" : "HP:0002870", + "display" : "Obstructive sleep apnea" + }, + { + "code" : "HP:0001763", + "display" : "Pes planus" + }, + { + "code" : "HP:0000782", + "display" : "Abnormality of the scapula" + }, + { + "code" : "HP:0001600", + "display" : "Abnormality of the larynx" + }, + { + "code" : "HP:0002088", + "display" : "Abnormal lung morphology" + }, + { + "code" : "HP:0011407", + "display" : "Proportionate tall stature" + }, + { + "code" : "HP:0000541", + "display" : "Retinal detachment" + }, + { + "code" : "HP:0001373", + "display" : "Joint dislocation" + }, + { + "code" : "HP:0000938", + "display" : "Osteopenia" + }, + { + "code" : "HP:0002942", + "display" : "Thoracic kyphosis" + }, + { + "code" : "HP:0001840", + "display" : "Metatarsus adductus" + }, + { + "code" : "HP:0001844", + "display" : "Abnormality of the hallux" + }, + { + "code" : "HP:0001765", + "display" : "Hammertoe" + }, + { + "code" : "HP:0000606", + "display" : "Abnormality of the periorbital region" + }, + { + "code" : "HP:0002757", + "display" : "Recurrent fractures" + }, + { + "code" : "HP:0000647", + "display" : "Sclerocornea" + }, + { + "code" : "HP:0001166", + "display" : "Arachnodactyly" + }, + { + "code" : "HP:0005490", + "display" : "Postnatal macrocephaly" + }, + { + "code" : "HP:0011363", + "display" : "Abnormality of hair growth rate" + }, + { + "code" : "HP:0000276", + "display" : "Long face" + }, + { + "code" : "HP:0000275", + "display" : "Narrow face" + }, + { + "code" : "HP:0000337", + "display" : "Broad forehead" + }, + { + "code" : "HP:0002267", + "display" : "Exaggerated startle response" + }, + { + "code" : "HP:0002187", + "display" : "Intellectual disability, profound" + }, + { + "code" : "HP:0000728", + "display" : "Impaired ability to form peer relationships" + }, + { + "code" : "HP:0000733", + "display" : "Stereotypy" + }, + { + "code" : "HP:0000739", + "display" : "Anxiety" + }, + { + "code" : "HP:0000929", + "display" : "Abnormal skull morphology" + }, + { + "code" : "HP:0001965", + "display" : "Abnormal scalp morphology" + }, + { + "code" : "HP:0100538", + "display" : "Abnormality of the supraorbital ridges" + }, + { + "code" : "HP:0000309", + "display" : "Abnormality of the midface" + }, + { + "code" : "HP:0000277", + "display" : "Abnormality of the mandible" + }, + { + "code" : "HP:0000765", + "display" : "Abnormality of the thorax" + }, + { + "code" : "HP:0100008", + "display" : "Schwannoma" + }, + { + "code" : "HP:0030038", + "display" : "Enchondroma" + }, + { + "code" : "HP:0100777", + "display" : "Exostoses" + }, + { + "code" : "HP:0011663", + "display" : "Right ventricular cardiomyopathy" + }, + { + "code" : "HP:0011675", + "display" : "Arrhythmia" + }, + { + "code" : "HP:0001962", + "display" : "Palpitations" + }, + { + "code" : "HP:0001279", + "display" : "Syncope" + }, + { + "code" : "HP:0004756", + "display" : "Ventricular tachycardia" + }, + { + "code" : "HP:0000252", + "display" : "Microcephaly" + }, + { + "code" : "HP:0000303", + "display" : "Mandibular prognathia" + }, + { + "code" : "HP:0000664", + "display" : "Synophrys" + }, + { + "code" : "HP:0001609", + "display" : "Hoarse voice" + }, + { + "code" : "HP:0002558", + "display" : "Supernumerary nipple" + }, + { + "code" : "HP:0001634", + "display" : "Mitral valve prolapse" + }, + { + "code" : "HP:0000028", + "display" : "Cryptorchidism" + }, + { + "code" : "HP:0000973", + "display" : "Cutis laxa" + }, + { + "code" : "HP:0001518", + "display" : "Small for gestational age" + }, + { + "code" : "HP:0000527", + "display" : "Long eyelashes" + }, + { + "code" : "HP:0002808", + "display" : "Kyphosis" + }, + { + "code" : "HP:0000248", + "display" : "Brachycephaly" + }, + { + "code" : "HP:0000505", + "display" : "Visual impairment" + }, + { + "code" : "HP:0000512", + "display" : "Abnormal electroretinogram" + }, + { + "code" : "HP:0000517", + "display" : "Abnormality of the lens" + }, + { + "code" : "HP:0000529", + "display" : "Progressive visual loss" + }, + { + "code" : "HP:0000586", + "display" : "Shallow orbits" + }, + { + "code" : "HP:0000603", + "display" : "Central scotoma" + }, + { + "code" : "HP:0000939", + "display" : "Osteoporosis" + }, + { + "code" : "HP:0001377", + "display" : "Limited elbow extension" + }, + { + "code" : "HP:0001387", + "display" : "Joint stiffness" + }, + { + "code" : "HP:0001822", + "display" : "Hallux valgus" + }, + { + "code" : "HP:0002657", + "display" : "Spondylometaphyseal dysplasia" + }, + { + "code" : "HP:0003026", + "display" : "Short long bone" + }, + { + "code" : "HP:0006462", + "display" : "Generalized bone demineralization" + }, + { + "code" : "HP:0008873", + "display" : "Disproportionate short-limb short stature" + }, + { + "code" : "HP:0008905", + "display" : "Rhizomelia" + }, + { + "code" : "HP:0008922", + "display" : "Childhood-onset short-trunk short stature" + }, + { + "code" : "HP:0200020", + "display" : "Corneal erosion" + }, + { + "code" : "HP:0001172", + "display" : "Abnormal thumb morphology" + }, + { + "code" : "HP:0002286", + "display" : "Fair hair" + }, + { + "code" : "HP:0010719", + "display" : "Abnormality of hair texture" + }, + { + "code" : "HP:0010720", + "display" : "Abnormal hair pattern" + }, + { + "code" : "HP:0001635", + "display" : "Congestive heart failure" + }, + { + "code" : "HP:0001644", + "display" : "Dilated cardiomyopathy" + }, + { + "code" : "HP:0001663", + "display" : "Ventricular fibrillation" + }, + { + "code" : "HP:0011712", + "display" : "Right bundle branch block" + }, + { + "code" : "HP:0000272", + "display" : "Malar flattening" + }, + { + "code" : "HP:0000286", + "display" : "Epicanthus" + }, + { + "code" : "HP:0000322", + "display" : "Short philtrum" + }, + { + "code" : "HP:0000463", + "display" : "Anteverted nares" + }, + { + "code" : "HP:0000494", + "display" : "Downslanted palpebral fissures" + }, + { + "code" : "HP:0000543", + "display" : "Optic disc pallor" + }, + { + "code" : "HP:0000699", + "display" : "Diastema" + }, + { + "code" : "HP:0000773", + "display" : "Short ribs" + }, + { + "code" : "HP:0000887", + "display" : "Cupped ribs" + }, + { + "code" : "HP:0000946", + "display" : "Hypoplastic ilia" + }, + { + "code" : "HP:0000954", + "display" : "Single transverse palmar crease" + }, + { + "code" : "HP:0001182", + "display" : "Tapered finger" + }, + { + "code" : "HP:0001537", + "display" : "Umbilical hernia" + }, + { + "code" : "HP:0002007", + "display" : "Frontal bossing" + }, + { + "code" : "HP:0002980", + "display" : "Femoral bowing" + }, + { + "code" : "HP:0002982", + "display" : "Tibial bowing" + }, + { + "code" : "HP:0003021", + "display" : "Metaphyseal cupping" + }, + { + "code" : "HP:0005011", + "display" : "Mesomelic arm shortening" + }, + { + "code" : "HP:0008803", + "display" : "obsolete Narrow sacroiliac notch" + }, + { + "code" : "HP:0009117", + "display" : "Aplasia/Hypoplasia of the maxilla" + }, + { + "code" : "HP:0011220", + "display" : "Prominent forehead" + }, + { + "code" : "HP:0012801", + "display" : "Narrow jaw" + }, + { + "code" : "HP:0000243", + "display" : "Trigonocephaly" + }, + { + "code" : "HP:0000358", + "display" : "Posteriorly rotated ears" + }, + { + "code" : "HP:0000411", + "display" : "Protruding ear" + }, + { + "code" : "HP:0000646", + "display" : "Amblyopia" + }, + { + "code" : "HP:0002812", + "display" : "Coxa vara" + }, + { + "code" : "HP:0002970", + "display" : "Genu varum" + }, + { + "code" : "HP:0012775", + "display" : "Stellate iris" + }, + { + "code" : "HP:0000278", + "display" : "Retrognathia" + }, + { + "code" : "HP:0009796", + "display" : "Branchial cyst" + }, + { + "code" : "HP:0002474", + "display" : "Expressive language delay" + }, + { + "code" : "HP:0007018", + "display" : "Attention deficit hyperactivity disorder" + }, + { + "code" : "HP:0003198", + "display" : "Myopathy" + }, + { + "code" : "HP:0003324", + "display" : "Generalized muscle weakness" + }, + { + "code" : "HP:0003552", + "display" : "Muscle stiffness" + }, + { + "code" : "HP:0003554", + "display" : "Type 2 muscle fiber atrophy" + }, + { + "code" : "HP:0003557", + "display" : "Increased variability in muscle fiber diameter" + }, + { + "code" : "HP:0009025", + "display" : "Increased connective tissue" + }, + { + "code" : "HP:0003635", + "display" : "Loss of subcutaneous adipose tissue in limbs" + }, + { + "code" : "HP:0002597", + "display" : "Abnormality of the vasculature" + }, + { + "code" : "HP:0001649", + "display" : "Tachycardia" + }, + { + "code" : "HP:0001638", + "display" : "Cardiomyopathy" + }, + { + "code" : "HP:0001654", + "display" : "Abnormal heart valve morphology" + }, + { + "code" : "HP:0001671", + "display" : "Abnormal cardiac septum morphology" + }, + { + "code" : "HP:0000103", + "display" : "Polyuria" + }, + { + "code" : "HP:0000114", + "display" : "Proximal tubulopathy" + }, + { + "code" : "HP:0001878", + "display" : "Hemolytic anemia" + }, + { + "code" : "HP:0001931", + "display" : "Hypochromic anemia" + }, + { + "code" : "HP:0001935", + "display" : "Microcytic anemia" + }, + { + "code" : "HP:0001959", + "display" : "Polydipsia" + }, + { + "code" : "HP:0001994", + "display" : "Renal Fanconi syndrome" + }, + { + "code" : "HP:0002134", + "display" : "Abnormality of the basal ganglia" + }, + { + "code" : "HP:0002188", + "display" : "Delayed CNS myelination" + }, + { + "code" : "HP:0002908", + "display" : "Conjugated hyperbilirubinemia" + }, + { + "code" : "HP:0003774", + "display" : "Stage 5 chronic kidney disease" + }, + { + "code" : "HP:0010700", + "display" : "obsolete Total cataract" + }, + { + "code" : "HP:0000193", + "display" : "Bifid uvula" + }, + { + "code" : "HP:0000219", + "display" : "Thin upper lip vermilion" + }, + { + "code" : "HP:0000426", + "display" : "Prominent nasal bridge" + }, + { + "code" : "HP:0000452", + "display" : "Choanal stenosis" + }, + { + "code" : "HP:0000490", + "display" : "Deeply set eye" + }, + { + "code" : "HP:0000540", + "display" : "Hypermetropia" + }, + { + "code" : "HP:0000579", + "display" : "Nasolacrimal duct obstruction" + }, + { + "code" : "HP:0000684", + "display" : "Delayed eruption of teeth" + }, + { + "code" : "HP:0000960", + "display" : "Sacral dimple" + }, + { + "code" : "HP:0000998", + "display" : "Hypertrichosis" + }, + { + "code" : "HP:0001643", + "display" : "Patent ductus arteriosus" + }, + { + "code" : "HP:0010813", + "display" : "Abnormal number of hair whorls" + }, + { + "code" : "HP:0012384", + "display" : "Rhinitis" + }, + { + "code" : "HP:0012745", + "display" : "Short palpebral fissure" + }, + { + "code" : "HP:0000359", + "display" : "Abnormality of the inner ear" + }, + { + "code" : "HP:0000429", + "display" : "Abnormality of the nasal alae" + }, + { + "code" : "HP:0000436", + "display" : "Abnormality of the nasal tip" + }, + { + "code" : "HP:0000499", + "display" : "Abnormal eyelash morphology" + }, + { + "code" : "HP:0000534", + "display" : "Abnormal eyebrow morphology" + }, + { + "code" : "HP:0000951", + "display" : "Abnormality of the skin" + }, + { + "code" : "HP:0001000", + "display" : "Abnormality of skin pigmentation" + }, + { + "code" : "HP:0001597", + "display" : "Abnormality of the nail" + }, + { + "code" : "HP:0006483", + "display" : "Abnormal number of teeth" + }, + { + "code" : "HP:0009929", + "display" : "Abnormality of the columella" + }, + { + "code" : "HP:0011119", + "display" : "Abnormality of the nasal dorsum" + }, + { + "code" : "HP:0012808", + "display" : "Abnormal nasal base" + }, + { + "code" : "HP:0100490", + "display" : "Camptodactyly of finger" + }, + { + "code" : "HP:0000964", + "display" : "Eczema" + }, + { + "code" : "HP:0004442", + "display" : "Sagittal craniosynostosis" + }, + { + "code" : "HP:0000414", + "display" : "Bulbous nose" + }, + { + "code" : "HP:0003180", + "display" : "Flat acetabular roof" + }, + { + "code" : "HP:0000422", + "display" : "Abnormality of the nasal bridge" + }, + { + "code" : "HP:0000614", + "display" : "Abnormal nasolacrimal system morphology" + }, + { + "code" : "HP:0001167", + "display" : "Abnormality of finger" + }, + { + "code" : "HP:0001595", + "display" : "Abnormal hair morphology" + }, + { + "code" : "HP:0012373", + "display" : "Abnormal eye physiology" + }, + { + "code" : "HP:0001655", + "display" : "Patent foramen ovale" + }, + { + "code" : "HP:0001647", + "display" : "Bicuspid aortic valve" + }, + { + "code" : "HP:0000574", + "display" : "Thick eyebrow" + }, + { + "code" : "HP:0001169", + "display" : "Broad palm" + }, + { + "code" : "HP:0006471", + "display" : "Fixed elbow flexion" + }, + { + "code" : "HP:0008689", + "display" : "Bilateral cryptorchidism" + }, + { + "code" : "HP:0011304", + "display" : "Broad thumb" + }, + { + "code" : "HP:0005110", + "display" : "Atrial fibrillation" + }, + { + "code" : "HP:0001633", + "display" : "Abnormal mitral valve morphology" + }, + { + "code" : "HP:0001641", + "display" : "Abnormal pulmonary valve morphology" + }, + { + "code" : "HP:0001702", + "display" : "Abnormal tricuspid valve morphology" + }, + { + "code" : "HP:0000012", + "display" : "Urinary urgency" + }, + { + "code" : "HP:0000020", + "display" : "Urinary incontinence" + }, + { + "code" : "HP:0000131", + "display" : "Uterine leiomyoma" + }, + { + "code" : "HP:0000132", + "display" : "Menorrhagia" + }, + { + "code" : "HP:0000138", + "display" : "Ovarian cyst" + }, + { + "code" : "HP:0000853", + "display" : "Goiter" + }, + { + "code" : "HP:0000953", + "display" : "Hyperpigmentation of the skin" + }, + { + "code" : "HP:0001061", + "display" : "Acne" + }, + { + "code" : "HP:0002315", + "display" : "Headache" + }, + { + "code" : "HP:0004324", + "display" : "Increased body weight" + }, + { + "code" : "HP:0000069", + "display" : "Abnormality of the ureter" + }, + { + "code" : "HP:0000077", + "display" : "Abnormality of the kidney" + }, + { + "code" : "HP:0000759", + "display" : "Abnormal peripheral nervous system morphology" + }, + { + "code" : "HP:0008069", + "display" : "Neoplasm of the skin" + }, + { + "code" : "HP:0011276", + "display" : "Vascular skin abnormality" + }, + { + "code" : "HP:0000705", + "display" : "Amelogenesis imperfecta" + }, + { + "code" : "HP:0001256", + "display" : "Intellectual disability, mild" + }, + { + "code" : "HP:0000325", + "display" : "Triangular face" + }, + { + "code" : "HP:0000160", + "display" : "Narrow mouth" + }, + { + "code" : "HP:0009487", + "display" : "Ulnar deviation of the hand" + }, + { + "code" : "HP:0001249", + "display" : "Intellectual disability" + }, + { + "code" : "HP:0008064", + "display" : "Ichthyosis" + }, + { + "code" : "HP:0000311", + "display" : "Round face" + }, + { + "code" : "HP:0001653", + "display" : "Mitral regurgitation" + }, + { + "code" : "HP:0001771", + "display" : "Achilles tendon contracture" + }, + { + "code" : "HP:0012032", + "display" : "Lipoma" + }, + { + "code" : "HP:0012368", + "display" : "Flat face" + }, + { + "code" : "HP:0030053", + "display" : "Stiff skin" + }, + { + "code" : "HP:0011124", + "display" : "Abnormality of epidermal morphology" + }, + { + "code" : "HP:0011097", + "display" : "Epileptic spasm" + }, + { + "code" : "HP:0000407", + "display" : "Sensorineural hearing impairment" + }, + { + "code" : "HP:0000331", + "display" : "Short chin" + }, + { + "code" : "HP:0000340", + "display" : "Sloping forehead" + }, + { + "code" : "HP:0000486", + "display" : "Strabismus" + }, + { + "code" : "HP:0000713", + "display" : "Agitation" + }, + { + "code" : "HP:0000802", + "display" : "Impotence" + }, + { + "code" : "HP:0001272", + "display" : "Cerebellar atrophy" + }, + { + "code" : "HP:0001276", + "display" : "Hypertonia" + }, + { + "code" : "HP:0001321", + "display" : "Cerebellar hypoplasia" + }, + { + "code" : "HP:0001322", + "display" : "obsolete Brain very small" + }, + { + "code" : "HP:0002061", + "display" : "Lower limb spasticity" + }, + { + "code" : "HP:0002529", + "display" : "Neuronal loss in central nervous system" + }, + { + "code" : "HP:0002540", + "display" : "Inability to walk" + }, + { + "code" : "HP:0005484", + "display" : "Postnatal microcephaly" + }, + { + "code" : "HP:0012850", + "display" : "Small intestinal dysmotility" + }, + { + "code" : "HP:0000504", + "display" : "Abnormality of vision" + }, + { + "code" : "HP:0002118", + "display" : "Abnormality of the cerebral ventricles" + }, + { + "code" : "HP:0002363", + "display" : "Abnormality of brainstem morphology" + }, + { + "code" : "HP:0010651", + "display" : "Abnormal meningeal morphology" + }, + { + "code" : "HP:0100024", + "display" : "Conspicuously happy disposition" + }, + { + "code" : "HP:0002538", + "display" : "Abnormality of the cerebral cortex" + }, + { + "code" : "HP:0000054", + "display" : "Micropenis" + }, + { + "code" : "HP:0000215", + "display" : "Thick upper lip vermilion" + }, + { + "code" : "HP:0000293", + "display" : "Full cheeks" + }, + { + "code" : "HP:0000349", + "display" : "Widow's peak" + }, + { + "code" : "HP:0000444", + "display" : "Convex nasal ridge" + }, + { + "code" : "HP:0000506", + "display" : "Telecanthus" + }, + { + "code" : "HP:0000592", + "display" : "Blue sclerae" + }, + { + "code" : "HP:0000691", + "display" : "Microdontia" + }, + { + "code" : "HP:0000698", + "display" : "Conical tooth" + }, + { + "code" : "HP:0002000", + "display" : "Short columella" + }, + { + "code" : "HP:0002097", + "display" : "Emphysema" + }, + { + "code" : "HP:0002209", + "display" : "Sparse scalp hair" + }, + { + "code" : "HP:0002816", + "display" : "Genu recurvatum" + }, + { + "code" : "HP:0005116", + "display" : "Arterial tortuosity" + }, + { + "code" : "HP:0007957", + "display" : "Corneal opacity" + }, + { + "code" : "HP:0008070", + "display" : "Sparse hair" + }, + { + "code" : "HP:0009623", + "display" : "Proximal placement of thumb" + }, + { + "code" : "HP:0010055", + "display" : "Broad hallux" + }, + { + "code" : "HP:0011318", + "display" : "Bicoronal synostosis" + }, + { + "code" : "HP:0011968", + "display" : "Feeding difficulties" + }, + { + "code" : "HP:0200067", + "display" : "Recurrent spontaneous abortion" + }, + { + "code" : "HP:0011819", + "display" : "Submucous cleft soft palate" + }, + { + "code" : "HP:0000268", + "display" : "Dolichocephaly" + }, + { + "code" : "HP:0003302", + "display" : "Spondylolisthesis" + }, + { + "code" : "HP:0000582", + "display" : "Upslanted palpebral fissure" + }, + { + "code" : "HP:0000952", + "display" : "Jaundice" + }, + { + "code" : "HP:0001298", + "display" : "Encephalopathy" + }, + { + "code" : "HP:0001396", + "display" : "Cholestasis" + }, + { + "code" : "HP:0002059", + "display" : "Cerebral atrophy" + }, + { + "code" : "HP:0002171", + "display" : "Gliosis" + }, + { + "code" : "HP:0002240", + "display" : "Hepatomegaly" + }, + { + "code" : "HP:0002353", + "display" : "EEG abnormality" + }, + { + "code" : "HP:0002446", + "display" : "Astrocytosis" + }, + { + "code" : "HP:0003287", + "display" : "Abnormality of mitochondrial metabolism" + }, + { + "code" : "HP:0011449", + "display" : "Knee clonus" + }, + { + "code" : "HP:0012852", + "display" : "Hepatic bridging fibrosis" + }, + { + "code" : "HP:0100626", + "display" : "Chronic hepatic failure" + }, + { + "code" : "HP:0000385", + "display" : "Small earlobe" + }, + { + "code" : "HP:0009748", + "display" : "Large earlobe" + }, + { + "code" : "HP:0000157", + "display" : "Abnormality of the tongue" + }, + { + "code" : "HP:0000172", + "display" : "Abnormality of the uvula" + }, + { + "code" : "HP:0000174", + "display" : "Abnormal palate morphology" + }, + { + "code" : "HP:0000306", + "display" : "Abnormality of the chin" + }, + { + "code" : "HP:0004408", + "display" : "Abnormality of the sense of smell" + }, + { + "code" : "HP:0009912", + "display" : "Abnormality of the tragus" + }, + { + "code" : "HP:0000537", + "display" : "Epicanthus inversus" + }, + { + "code" : "HP:0000565", + "display" : "Esotropia" + }, + { + "code" : "HP:0000752", + "display" : "Hyperactivity" + }, + { + "code" : "HP:0003186", + "display" : "Inverted nipples" + }, + { + "code" : "HP:0012503", + "display" : "Abnormality of the pituitary gland" + }, + { + "code" : "HP:0100710", + "display" : "Impulsivity" + }, + { + "code" : "HP:0000357", + "display" : "Abnormal location of ears" + }, + { + "code" : "HP:0000820", + "display" : "Abnormality of the thyroid gland" + }, + { + "code" : "HP:0000828", + "display" : "Abnormality of the parathyroid gland" + }, + { + "code" : "HP:0000834", + "display" : "Abnormality of the adrenal glands" + }, + { + "code" : "HP:0012093", + "display" : "Abnormality of endocrine pancreas physiology" + }, + { + "code" : "HP:0000269", + "display" : "Prominent occiput" + }, + { + "code" : "HP:0000535", + "display" : "Sparse and thin eyebrow" + }, + { + "code" : "HP:0000639", + "display" : "Nystagmus" + }, + { + "code" : "HP:0000718", + "display" : "Aggressive behavior" + }, + { + "code" : "HP:0000957", + "display" : "Cafe-au-lait spot" + }, + { + "code" : "HP:0000256", + "display" : "Macrocephaly" + }, + { + "code" : "HP:0000750", + "display" : "Delayed speech and language development" + }, + { + "code" : "HP:0000963", + "display" : "Thin skin" + }, + { + "code" : "HP:0001260", + "display" : "Dysarthria" + }, + { + "code" : "HP:0002194", + "display" : "Delayed gross motor development" + }, + { + "code" : "HP:0003196", + "display" : "Short nose" + }, + { + "code" : "HP:0001155", + "display" : "Abnormality of the hand" + }, + { + "code" : "HP:0100022", + "display" : "Abnormality of movement" + }, + { + "code" : "HP:0010862", + "display" : "Delayed fine motor development" + }, + { + "code" : "HP:0000343", + "display" : "Long philtrum" + }, + { + "code" : "HP:0000717", + "display" : "Autism" + }, + { + "code" : "HP:0001883", + "display" : "Talipes" + }, + { + "code" : "HP:0002553", + "display" : "Highly arched eyebrow" + }, + { + "code" : "HP:0007488", + "display" : "Diffuse skin atrophy" + }, + { + "code" : "HP:0000822", + "display" : "Hypertension" + }, + { + "code" : "HP:0001278", + "display" : "Orthostatic hypotension" + }, + { + "code" : "HP:0001944", + "display" : "Dehydration" + }, + { + "code" : "HP:0001945", + "display" : "Fever" + }, + { + "code" : "HP:0002019", + "display" : "Constipation" + }, + { + "code" : "HP:0002020", + "display" : "Gastroesophageal reflux" + }, + { + "code" : "HP:0002027", + "display" : "Abdominal pain" + }, + { + "code" : "HP:0002718", + "display" : "Recurrent bacterial infections" + }, + { + "code" : "HP:0002841", + "display" : "Recurrent fungal infections" + }, + { + "code" : "HP:0004395", + "display" : "Malnutrition" + }, + { + "code" : "HP:0009830", + "display" : "Peripheral neuropathy" + }, + { + "code" : "HP:0000126", + "display" : "Hydronephrosis" + }, + { + "code" : "HP:0000519", + "display" : "Developmental cataract" + }, + { + "code" : "HP:0000648", + "display" : "Optic atrophy" + }, + { + "code" : "HP:0001053", + "display" : "Hypopigmented skin patches" + }, + { + "code" : "HP:0001087", + "display" : "Developmental glaucoma" + }, + { + "code" : "HP:0002119", + "display" : "Ventriculomegaly" + }, + { + "code" : "HP:0002280", + "display" : "Enlarged cisterna magna" + }, + { + "code" : "HP:0003298", + "display" : "Spina bifida occulta" + }, + { + "code" : "HP:0004467", + "display" : "Preauricular pit" + }, + { + "code" : "HP:0008511", + "display" : "Central posterior corneal opacity" + }, + { + "code" : "HP:0010780", + "display" : "Hyperacusis" + }, + { + "code" : "HP:0030048", + "display" : "Colpocephaly" + }, + { + "code" : "HP:0100335", + "display" : "Non-midline cleft lip" + }, + { + "code" : "HP:0000525", + "display" : "Abnormality iris morphology" + }, + { + "code" : "HP:0002719", + "display" : "Recurrent infections" + }, + { + "code" : "HP:0000153", + "display" : "Abnormality of the mouth" + }, + { + "code" : "HP:0001903", + "display" : "Anemia" + }, + { + "code" : "HP:0002094", + "display" : "Dyspnea" + }, + { + "code" : "HP:0002206", + "display" : "Pulmonary fibrosis" + }, + { + "code" : "HP:0002789", + "display" : "Tachypnea" + }, + { + "code" : "HP:0002793", + "display" : "Abnormal pattern of respiration" + }, + { + "code" : "HP:0003565", + "display" : "Elevated erythrocyte sedimentation rate" + }, + { + "code" : "HP:0006517", + "display" : "Intraalveolar phospholipid accumulation" + }, + { + "code" : "HP:0006530", + "display" : "Interstitial pulmonary abnormality" + }, + { + "code" : "HP:0100759", + "display" : "Clubbing of fingers" + }, + { + "code" : "HP:0002103", + "display" : "Abnormal pleura morphology" + }, + { + "code" : "HP:0001596", + "display" : "Alopecia" + }, + { + "code" : "HP:0001882", + "display" : "Leukopenia" + }, + { + "code" : "HP:0002013", + "display" : "Vomiting" + }, + { + "code" : "HP:0002028", + "display" : "Chronic diarrhea" + }, + { + "code" : "HP:0002573", + "display" : "Hematochezia" + }, + { + "code" : "HP:0002960", + "display" : "Autoimmunity" + }, + { + "code" : "HP:0005387", + "display" : "Combined immunodeficiency" + }, + { + "code" : "HP:0011109", + "display" : "Chronic sinusitis" + }, + { + "code" : "HP:0004429", + "display" : "Recurrent viral infections" + }, + { + "code" : "HP:0000280", + "display" : "Coarse facial features" + }, + { + "code" : "HP:0000294", + "display" : "Low anterior hairline" + }, + { + "code" : "HP:0000577", + "display" : "Exotropia" + }, + { + "code" : "HP:0001873", + "display" : "Thrombocytopenia" + }, + { + "code" : "HP:0002011", + "display" : "Morphological central nervous system abnormality" + }, + { + "code" : "HP:0006610", + "display" : "Wide intermamillary distance" + }, + { + "code" : "HP:0011231", + "display" : "Prominent eyelashes" + }, + { + "code" : "HP:0012718", + "display" : "Morphological abnormality of the gastrointestinal tract" + }, + { + "code" : "HP:0002024", + "display" : "Malabsorption" + }, + { + "code" : "HP:0001394", + "display" : "Cirrhosis" + }, + { + "code" : "HP:0001414", + "display" : "Microvesicular hepatic steatosis" + }, + { + "code" : "HP:0001403", + "display" : "Macrovesicular hepatic steatosis" + }, + { + "code" : "HP:0001410", + "display" : "Decreased liver function" + }, + { + "code" : "HP:0001409", + "display" : "Portal hypertension" + }, + { + "code" : "HP:0001744", + "display" : "Splenomegaly" + }, + { + "code" : "HP:0003394", + "display" : "Muscle spasm" + }, + { + "code" : "HP:0003750", + "display" : "Increased muscle fatiguability" + }, + { + "code" : "HP:0002123", + "display" : "Generalized myoclonic seizure" + }, + { + "code" : "HP:0002219", + "display" : "Facial hypertrichosis" + }, + { + "code" : "HP:0000831", + "display" : "Insulin-resistant diabetes mellitus" + }, + { + "code" : "HP:0001891", + "display" : "Iron deficiency anemia" + }, + { + "code" : "HP:0001264", + "display" : "Spastic diplegia" + }, + { + "code" : "HP:0002313", + "display" : "Spastic paraparesis" + }, + { + "code" : "HP:0001347", + "display" : "Hyperreflexia" + }, + { + "code" : "HP:0002460", + "display" : "Distal muscle weakness" + }, + { + "code" : "HP:0000763", + "display" : "Sensory neuropathy" + }, + { + "code" : "HP:0001268", + "display" : "Mental deterioration" + }, + { + "code" : "HP:0002169", + "display" : "Clonus" + }, + { + "code" : "HP:0001332", + "display" : "Dystonia" + }, + { + "code" : "HP:0100716", + "display" : "Self-injurious behavior" + }, + { + "code" : "HP:0000602", + "display" : "Ophthalmoplegia" + }, + { + "code" : "HP:0001251", + "display" : "Ataxia" + }, + { + "code" : "HP:0000776", + "display" : "Congenital diaphragmatic hernia" + }, + { + "code" : "HP:0000410", + "display" : "Mixed hearing impairment" + }, + { + "code" : "HP:0000510", + "display" : "Rod-cone dystrophy" + }, + { + "code" : "HP:0004437", + "display" : "Cranial hyperostosis" + }, + { + "code" : "HP:0011001", + "display" : "Increased bone mineral density" + }, + { + "code" : "HP:0000956", + "display" : "Acanthosis nigricans" + }, + { + "code" : "HP:0000958", + "display" : "Dry skin" + }, + { + "code" : "HP:0000580", + "display" : "Pigmentary retinopathy" + }, + { + "code" : "HP:0000649", + "display" : "Abnormality of visual evoked potentials" + }, + { + "code" : "HP:0000657", + "display" : "Oculomotor apraxia" + }, + { + "code" : "HP:0000479", + "display" : "Abnormal retinal morphology" + }, + { + "code" : "HP:0001317", + "display" : "Abnormal cerebellum morphology" + }, + { + "code" : "HP:0001533", + "display" : "Slender build" + }, + { + "code" : "HP:0001629", + "display" : "Ventricular septal defect" + }, + { + "code" : "HP:0000703", + "display" : "Dentinogenesis imperfecta" + }, + { + "code" : "HP:0000914", + "display" : "Shield chest" + }, + { + "code" : "HP:0001500", + "display" : "Broad finger" + }, + { + "code" : "HP:0003086", + "display" : "Acromesomelia" + }, + { + "code" : "HP:0003416", + "display" : "Spinal canal stenosis" + }, + { + "code" : "HP:0002815", + "display" : "Abnormality of the knee" + }, + { + "code" : "HP:0002992", + "display" : "Abnormality of tibia morphology" + }, + { + "code" : "HP:0001639", + "display" : "Hypertrophic cardiomyopathy" + }, + { + "code" : "HP:0003236", + "display" : "Elevated serum creatine kinase" + }, + { + "code" : "HP:0001369", + "display" : "Arthritis" + }, + { + "code" : "HP:0003560", + "display" : "Muscular dystrophy" + }, + { + "code" : "HP:0003974", + "display" : "Absent radius" + }, + { + "code" : "HP:0002818", + "display" : "Abnormality of the radius" + }, + { + "code" : "HP:0001561", + "display" : "Polyhydramnios" + }, + { + "code" : "HP:0002299", + "display" : "Brittle hair" + }, + { + "code" : "HP:0002208", + "display" : "Coarse hair" + }, + { + "code" : "HP:0002213", + "display" : "Fine hair" + }, + { + "code" : "HP:0000522", + "display" : "Alacrima" + }, + { + "code" : "HP:0100704", + "display" : "Cerebral visual impairment" + }, + { + "code" : "HP:0012713", + "display" : "Moderate hearing impairment" + }, + { + "code" : "HP:0002307", + "display" : "Drooling" + }, + { + "code" : "HP:0002714", + "display" : "Downturned corners of mouth" + }, + { + "code" : "HP:0000191", + "display" : "Accessory oral frenulum" + }, + { + "code" : "HP:0000158", + "display" : "Macroglossia" + }, + { + "code" : "HP:0012020", + "display" : "Right aortic arch" + }, + { + "code" : "HP:0002104", + "display" : "Apnea" + }, + { + "code" : "HP:0000598", + "display" : "Abnormality of the ear" + }, + { + "code" : "HP:0007874", + "display" : "Almond-shaped palpebral fissure" + }, + { + "code" : "HP:0010804", + "display" : "Tented upper lip vermilion" + }, + { + "code" : "HP:0000885", + "display" : "Broad ribs" + }, + { + "code" : "HP:0000768", + "display" : "Pectus carinatum" + }, + { + "code" : "HP:0001680", + "display" : "Coarctation of aorta" + }, + { + "code" : "HP:0000687", + "display" : "Widely spaced teeth" + }, + { + "code" : "HP:0000047", + "display" : "Hypospadias" + }, + { + "code" : "HP:0001943", + "display" : "Hypoglycemia" + }, + { + "code" : "HP:0012369", + "display" : "Abnormality of malar bones" + }, + { + "code" : "HP:0009900", + "display" : "Unilateral deafness" + }, + { + "code" : "HP:0000023", + "display" : "Inguinal hernia" + }, + { + "code" : "HP:0000074", + "display" : "Ureteropelvic junction obstruction" + }, + { + "code" : "HP:0001800", + "display" : "Hypoplastic toenails" + }, + { + "code" : "HP:0001804", + "display" : "Hypoplastic fingernail" + }, + { + "code" : "HP:0002949", + "display" : "Fused cervical vertebrae" + }, + { + "code" : "HP:0008050", + "display" : "Abnormality of the palpebral fissures" + }, + { + "code" : "HP:0008577", + "display" : "Underfolded helix" + }, + { + "code" : "HP:0008589", + "display" : "Hypoplastic helices" + }, + { + "code" : "HP:0010863", + "display" : "Receptive language delay" + }, + { + "code" : "HP:0002282", + "display" : "Gray matter heterotopia" + }, + { + "code" : "HP:0002085", + "display" : "Occipital encephalocele" + }, + { + "code" : "HP:0001057", + "display" : "Aplasia cutis congenita" + }, + { + "code" : "HP:0000211", + "display" : "Trismus" + }, + { + "code" : "HP:0008422", + "display" : "Vertebral wedging" + }, + { + "code" : "HP:0003170", + "display" : "Abnormality of the acetabulum" + }, + { + "code" : "HP:0003272", + "display" : "Abnormality of the hip bone" + }, + { + "code" : "HP:0003028", + "display" : "Abnormality of the ankles" + }, + { + "code" : "HP:0003301", + "display" : "Irregular vertebral endplates" + }, + { + "code" : "HP:0010508", + "display" : "Metatarsus valgus" + }, + { + "code" : "HP:0009811", + "display" : "Abnormality of the elbow" + }, + { + "code" : "HP:0000736", + "display" : "Short attention span" + }, + { + "code" : "HP:0002912", + "display" : "Methylmalonic acidemia" + }, + { + "code" : "HP:0001941", + "display" : "Acidosis" + }, + { + "code" : "HP:0001992", + "display" : "Organic aciduria" + }, + { + "code" : "HP:0009027", + "display" : "Foot dorsiflexor weakness" + }, + { + "code" : "HP:0002063", + "display" : "Rigidity" + }, + { + "code" : "HP:0000384", + "display" : "Preauricular skin tag" + }, + { + "code" : "HP:0200046", + "display" : "Cat cry" + }, + { + "code" : "HP:0001357", + "display" : "Plagiocephaly" + }, + { + "code" : "HP:0000670", + "display" : "Carious teeth" + }, + { + "code" : "HP:0011090", + "display" : "Fused teeth" + }, + { + "code" : "HP:0012810", + "display" : "Wide nasal base" + }, + { + "code" : "HP:0010296", + "display" : "Ankyloglossia" + }, + { + "code" : "HP:0001636", + "display" : "Tetralogy of Fallot" + }, + { + "code" : "HP:0001305", + "display" : "Dandy-Walker malformation" + }, + { + "code" : "HP:0000238", + "display" : "Hydrocephalus" + }, + { + "code" : "HP:0005469", + "display" : "Flat occiput" + }, + { + "code" : "HP:0000270", + "display" : "Delayed cranial suture closure" + }, + { + "code" : "HP:0000239", + "display" : "Large fontanelles" + }, + { + "code" : "HP:0010537", + "display" : "Wide cranial sutures" + }, + { + "code" : "HP:0002217", + "display" : "Slow-growing hair" + }, + { + "code" : "HP:0000587", + "display" : "Abnormality of the optic nerve" + }, + { + "code" : "HP:0005989", + "display" : "Redundant neck skin" + }, + { + "code" : "HP:0010775", + "display" : "Vascular ring" + }, + { + "code" : "HP:0002779", + "display" : "Tracheomalacia" + }, + { + "code" : "HP:0002827", + "display" : "Hip dislocation" + }, + { + "code" : "HP:0001302", + "display" : "Pachygyria" + }, + { + "code" : "HP:0007362", + "display" : "Aplasia/Hypoplasia of the brainstem" + }, + { + "code" : "HP:0001558", + "display" : "Decreased fetal movement" + }, + { + "code" : "HP:0010878", + "display" : "Fetal cystic hygroma" + }, + { + "code" : "HP:0011398", + "display" : "Central hypotonia" + }, + { + "code" : "HP:0002071", + "display" : "Abnormality of extrapyramidal motor function" + }, + { + "code" : "HP:0000826", + "display" : "Precocious puberty" + }, + { + "code" : "HP:0000014", + "display" : "Abnormality of the bladder" + }, + { + "code" : "HP:0005037", + "display" : "Proximal radio-ulnar synostosis" + }, + { + "code" : "HP:0100543", + "display" : "Cognitive impairment" + }, + { + "code" : "HP:0000481", + "display" : "Abnormal cornea morphology" + }, + { + "code" : "HP:0000076", + "display" : "Vesicoureteral reflux" + }, + { + "code" : "HP:0000297", + "display" : "Facial hypotonia" + }, + { + "code" : "HP:0000391", + "display" : "Thickened helices" + }, + { + "code" : "HP:0001162", + "display" : "Postaxial hand polydactyly" + }, + { + "code" : "HP:0001385", + "display" : "Hip dysplasia" + }, + { + "code" : "HP:0002342", + "display" : "Intellectual disability, moderate" + }, + { + "code" : "HP:0003191", + "display" : "Cleft ala nasi" + }, + { + "code" : "HP:0009765", + "display" : "Low hanging columella" + }, + { + "code" : "HP:0010297", + "display" : "Bifid tongue" + }, + { + "code" : "HP:0011330", + "display" : "Metopic synostosis" + }, + { + "code" : "HP:0012804", + "display" : "Corneal ulceration" + }, + { + "code" : "HP:0010485", + "display" : "Hyperextensibility at elbow" + }, + { + "code" : "HP:0000609", + "display" : "Optic nerve hypoplasia" + }, + { + "code" : "HP:0001176", + "display" : "Large hands" + }, + { + "code" : "HP:0004233", + "display" : "Advanced ossification of carpal bones" + }, + { + "code" : "HP:0100842", + "display" : "Septo-optic dysplasia" + }, + { + "code" : "HP:0002034", + "display" : "Abnormality of the rectum" + }, + { + "code" : "HP:0002283", + "display" : "Global brain atrophy" + }, + { + "code" : "HP:0003115", + "display" : "Abnormal EKG" + }, + { + "code" : "HP:0002577", + "display" : "Abnormal stomach morphology" + }, + { + "code" : "HP:0002539", + "display" : "Cortical dysplasia" + }, + { + "code" : "HP:0006818", + "display" : "4-layered lissencephaly" + }, + { + "code" : "HP:0000593", + "display" : "Abnormal anterior chamber morphology" + }, + { + "code" : "HP:0000179", + "display" : "Thick lower lip vermilion" + }, + { + "code" : "HP:0002002", + "display" : "Deep philtrum" + }, + { + "code" : "HP:0009931", + "display" : "Enlarged naris" + }, + { + "code" : "HP:0002948", + "display" : "Vertebral fusion" + }, + { + "code" : "HP:0002937", + "display" : "Hemivertebrae" + }, + { + "code" : "HP:0002308", + "display" : "Arnold-Chiari malformation" + }, + { + "code" : "HP:0011320", + "display" : "Unilambdoid synostosis" + }, + { + "code" : "HP:0002781", + "display" : "Upper airway obstruction" + }, + { + "code" : "HP:0001363", + "display" : "Craniosynostosis" + }, + { + "code" : "HP:0000204", + "display" : "Cleft upper lip" + }, + { + "code" : "HP:0001738", + "display" : "Exocrine pancreatic insufficiency" + }, + { + "code" : "HP:0002823", + "display" : "Abnormality of femur morphology" + }, + { + "code" : "HP:0000823", + "display" : "Delayed puberty" + }, + { + "code" : "HP:0100279", + "display" : "Ulcerative colitis" + }, + { + "code" : "HP:0003834", + "display" : "Shoulder dislocation" + }, + { + "code" : "HP:0001065", + "display" : "Striae distensae" + }, + { + "code" : "HP:0000448", + "display" : "Prominent nose" + }, + { + "code" : "HP:0000554", + "display" : "Uveitis" + }, + { + "code" : "HP:0001006", + "display" : "obsolete Hypotrichosis" + }, + { + "code" : "HP:0000501", + "display" : "Glaucoma" + }, + { + "code" : "HP:0000262", + "display" : "Turricephaly" + }, + { + "code" : "HP:0000729", + "display" : "Autistic behavior" + }, + { + "code" : "HP:0010800", + "display" : "Absent cupid's bow" + }, + { + "code" : "HP:0010808", + "display" : "Protruding tongue" + }, + { + "code" : "HP:0009927", + "display" : "Aplasia of the nose" + }, + { + "code" : "HP:0100539", + "display" : "Periorbital edema" + }, + { + "code" : "HP:0000629", + "display" : "Periorbital fullness" + }, + { + "code" : "HP:0000178", + "display" : "Abnormality of lower lip" + }, + { + "code" : "HP:0000168", + "display" : "Abnormality of the gingiva" + }, + { + "code" : "HP:0001022", + "display" : "Albinism" + }, + { + "code" : "HP:0000177", + "display" : "Abnormality of upper lip" + }, + { + "code" : "HP:0001337", + "display" : "Tremor" + }, + { + "code" : "HP:0002135", + "display" : "Basal ganglia calcification" + }, + { + "code" : "HP:0002352", + "display" : "Leukoencephalopathy" + }, + { + "code" : "HP:0002514", + "display" : "Cerebral calcification" + }, + { + "code" : "HP:0010576", + "display" : "Intracranial cystic lesion" + }, + { + "code" : "HP:0001622", + "display" : "Premature birth" + }, + { + "code" : "HP:0002415", + "display" : "Leukodystrophy" + }, + { + "code" : "HP:0001320", + "display" : "Cerebellar vermis hypoplasia" + }, + { + "code" : "HP:0001773", + "display" : "Short foot" + }, + { + "code" : "HP:0002750", + "display" : "Delayed skeletal maturation" + }, + { + "code" : "HP:0004415", + "display" : "Pulmonary artery stenosis" + }, + { + "code" : "HP:0012741", + "display" : "Unilateral cryptorchidism" + }, + { + "code" : "HP:0000036", + "display" : "Abnormality of the penis" + }, + { + "code" : "HP:0002408", + "display" : "Cerebral arteriovenous malformation" + }, + { + "code" : "HP:0007457", + "display" : "Prominent veins on trunk" + }, + { + "code" : "HP:0000378", + "display" : "Cupped ear" + }, + { + "code" : "HP:0000396", + "display" : "Overfolded helix" + }, + { + "code" : "HP:0000035", + "display" : "Abnormal testis morphology" + }, + { + "code" : "HP:0009895", + "display" : "Abnormality of the crus of the helix" + }, + { + "code" : "HP:0000034", + "display" : "Hydrocele testis" + }, + { + "code" : "HP:0000722", + "display" : "Obsessive-compulsive behavior" + }, + { + "code" : "HP:0000845", + "display" : "Growth hormone excess" + }, + { + "code" : "HP:0100829", + "display" : "Galactorrhea" + }, + { + "code" : "HP:0001578", + "display" : "Increased circulating cortisol level" + }, + { + "code" : "HP:0000786", + "display" : "Primary amenorrhea" + }, + { + "code" : "HP:0001701", + "display" : "Pericarditis" + }, + { + "code" : "HP:0002076", + "display" : "Migraine" + }, + { + "code" : "HP:0004755", + "display" : "Supraventricular tachycardia" + }, + { + "code" : "HP:0010522", + "display" : "Dyslexia" + }, + { + "code" : "HP:0004313", + "display" : "Decreased circulating antibody level" + }, + { + "code" : "HP:0000011", + "display" : "Neurogenic bladder" + }, + { + "code" : "HP:0000641", + "display" : "Dysmetric saccades" + }, + { + "code" : "HP:0007772", + "display" : "Impaired smooth pursuit" + }, + { + "code" : "HP:0001583", + "display" : "Rotary nystagmus" + }, + { + "code" : "HP:0010544", + "display" : "Vertical nystagmus" + }, + { + "code" : "HP:0012735", + "display" : "Cough" + }, + { + "code" : "HP:0002075", + "display" : "Dysdiadochokinesis" + }, + { + "code" : "HP:0007256", + "display" : "Abnormal pyramidal sign" + }, + { + "code" : "HP:0001257", + "display" : "Spasticity" + }, + { + "code" : "HP:0002321", + "display" : "Vertigo" + }, + { + "code" : "HP:0002384", + "display" : "Focal impaired awareness seizure" + }, + { + "code" : "HP:0011376", + "display" : "Morphological abnormality of the vestibule of the inner ear" + }, + { + "code" : "HP:0002326", + "display" : "Transient ischemic attack" + }, + { + "code" : "HP:0005584", + "display" : "Renal cell carcinoma" + }, + { + "code" : "HP:0003124", + "display" : "Hypercholesterolemia" + }, + { + "code" : "HP:0003002", + "display" : "Breast carcinoma" + }, + { + "code" : "HP:0004953", + "display" : "obsolete Dilatation of abdominal aorta" + }, + { + "code" : "HP:0004944", + "display" : "Dilatation of the cerebral artery" + }, + { + "code" : "HP:0000100", + "display" : "Nephrotic syndrome" + }, + { + "code" : "HP:0002783", + "display" : "Recurrent lower respiratory tract infections" + }, + { + "code" : "HP:0003470", + "display" : "Paralysis" + }, + { + "code" : "HP:0006597", + "display" : "Diaphragmatic paralysis" + }, + { + "code" : "HP:0008151", + "display" : "Prolonged prothrombin time" + }, + { + "code" : "HP:0010628", + "display" : "Facial palsy" + }, + { + "code" : "HP:0011892", + "display" : "Low levels of vitamin K" + }, + { + "code" : "HP:0001075", + "display" : "Atrophic scars" + }, + { + "code" : "HP:0001816", + "display" : "Thin nail" + }, + { + "code" : "HP:0002216", + "display" : "Premature graying of hair" + }, + { + "code" : "HP:0003401", + "display" : "Paresthesia" + }, + { + "code" : "HP:0100134", + "display" : "Abnormality of the axillary hair" + }, + { + "code" : "HP:0100797", + "display" : "Toenail dysplasia" + }, + { + "code" : "HP:0010461", + "display" : "Abnormality of the male genitalia" + }, + { + "code" : "HP:0000044", + "display" : "Hypogonadotropic hypogonadism" + }, + { + "code" : "HP:0100568", + "display" : "Neoplasm of the endocrine system" + }, + { + "code" : "HP:0001646", + "display" : "Abnormal aortic valve morphology" + }, + { + "code" : "HP:0000813", + "display" : "Bicornuate uterus" + }, + { + "code" : "HP:0004380", + "display" : "Aortic valve calcification" + }, + { + "code" : "HP:0001650", + "display" : "Aortic valve stenosis" + }, + { + "code" : "HP:0000073", + "display" : "Ureteral duplication" + }, + { + "code" : "HP:0100651", + "display" : "Type I diabetes mellitus" + }, + { + "code" : "HP:0000819", + "display" : "Diabetes mellitus" + }, + { + "code" : "HP:0000573", + "display" : "Retinal hemorrhage" + }, + { + "code" : "HP:0005264", + "display" : "Abnormality of the gallbladder" + }, + { + "code" : "HP:0000475", + "display" : "Broad neck" + }, + { + "code" : "HP:0000089", + "display" : "Renal hypoplasia" + }, + { + "code" : "HP:0000921", + "display" : "Missing ribs" + }, + { + "code" : "HP:0001789", + "display" : "Hydrops fetalis" + }, + { + "code" : "HP:0002089", + "display" : "Pulmonary hypoplasia" + }, + { + "code" : "HP:0003422", + "display" : "Vertebral segmentation defect" + }, + { + "code" : "HP:0002323", + "display" : "Anencephaly" + }, + { + "code" : "HP:0000341", + "display" : "Narrow forehead" + }, + { + "code" : "HP:0002869", + "display" : "Flared iliac wings" + }, + { + "code" : "HP:0003100", + "display" : "Slender long bone" + }, + { + "code" : "HP:0003275", + "display" : "Narrow pelvis bone" + }, + { + "code" : "HP:0009891", + "display" : "Underdeveloped supraorbital ridges" + }, + { + "code" : "HP:0011039", + "display" : "Abnormality of the helix" + }, + { + "code" : "HP:0008572", + "display" : "External ear malformation" + }, + { + "code" : "HP:0009738", + "display" : "Abnormality of the antihelix" + }, + { + "code" : "HP:0011328", + "display" : "Abnormality of fontanelles" + }, + { + "code" : "HP:0012155", + "display" : "Decreased corneal sensation" + }, + { + "code" : "HP:0004602", + "display" : "Cervical C2/C3 vertebral fusion" + }, + { + "code" : "HP:0002997", + "display" : "Abnormality of the ulna" + }, + { + "code" : "HP:0009777", + "display" : "Absent thumb" + }, + { + "code" : "HP:0002893", + "display" : "Pituitary adenoma" + }, + { + "code" : "HP:0040278", + "display" : "Prolactinoma" + }, + { + "code" : "HP:0001555", + "display" : "Asymmetry of the thorax" + }, + { + "code" : "HP:0000902", + "display" : "Rib fusion" + }, + { + "code" : "HP:0002164", + "display" : "Nail dysplasia" + }, + { + "code" : "HP:0011314", + "display" : "Abnormality of long bone morphology" + }, + { + "code" : "HP:0002867", + "display" : "Abnormality of the ilium" + }, + { + "code" : "HP:0000774", + "display" : "Narrow chest" + }, + { + "code" : "HP:0006482", + "display" : "Abnormality of dental morphology" + }, + { + "code" : "HP:0004383", + "display" : "Hypoplastic left heart" + }, + { + "code" : "HP:0002015", + "display" : "Dysphagia" + }, + { + "code" : "HP:0500093", + "display" : "Food allergy" + }, + { + "code" : "HP:0001519", + "display" : "Disproportionate tall stature" + }, + { + "code" : "HP:0003179", + "display" : "Protrusio acetabuli" + }, + { + "code" : "HP:0007385", + "display" : "Aplasia cutis congenita of scalp" + }, + { + "code" : "HP:0000716", + "display" : "Depressivity" + }, + { + "code" : "HP:0012583", + "display" : "Unilateral renal hypoplasia" + }, + { + "code" : "HP:0000618", + "display" : "Blindness" + }, + { + "code" : "HP:0001004", + "display" : "Lymphedema" + }, + { + "code" : "HP:0002652", + "display" : "Skeletal dysplasia" + }, + { + "code" : "HP:0012520", + "display" : "Perivascular spaces" + }, + { + "code" : "HP:0005293", + "display" : "Venous insufficiency" + }, + { + "code" : "HP:0012432", + "display" : "Chronic fatigue" + }, + { + "code" : "HP:0002578", + "display" : "Gastroparesis" + }, + { + "code" : "HP:0001658", + "display" : "Myocardial infarction" + }, + { + "code" : "HP:0001802", + "display" : "Absent toenail" + }, + { + "code" : "HP:0001821", + "display" : "Broad nail" + }, + { + "code" : "HP:0000807", + "display" : "Glandular hypospadias" + }, + { + "code" : "HP:0100582", + "display" : "Nasal polyposis" + }, + { + "code" : "HP:0002653", + "display" : "Bone pain" + }, + { + "code" : "HP:0001073", + "display" : "Cigarette-paper scars" + }, + { + "code" : "HP:0031913", + "display" : "Rhombencephalosynapsis" + }, + { + "code" : "HP:0002617", + "display" : "Dilatation" + }, + { + "code" : "HP:0005107", + "display" : "Abnormal sacrum morphology" + }, + { + "code" : "HP:0002025", + "display" : "Anal stenosis" + }, + { + "code" : "HP:0009099", + "display" : "Median cleft palate" + }, + { + "code" : "HP:0003212", + "display" : "Increased circulating IgE level" + }, + { + "code" : "HP:0001319", + "display" : "Neonatal hypotonia" + }, + { + "code" : "HP:0002659", + "display" : "Increased susceptibility to fractures" + }, + { + "code" : "HP:0025246", + "display" : "Trichilemmal cyst" + }, + { + "code" : "HP:0002107", + "display" : "Pneumothorax" + }, + { + "code" : "HP:0000107", + "display" : "Renal cyst" + }, + { + "code" : "HP:0001025", + "display" : "Urticaria" + }, + { + "code" : "HP:0002204", + "display" : "Pulmonary embolism" + }, + { + "code" : "HP:0001058", + "display" : "Poor wound healing" + }, + { + "code" : "HP:0003010", + "display" : "Prolonged bleeding time" + }, + { + "code" : "HP:0100502", + "display" : "Vitamin B12 deficiency" + }, + { + "code" : "HP:0100510", + "display" : "Low levels of vitamin C" + }, + { + "code" : "HP:0030976", + "display" : "Abnormal factor VIII activity" + }, + { + "code" : "HP:0100789", + "display" : "Torus palatinus" + }, + { + "code" : "HP:0000108", + "display" : "Renal corticomedullary cysts" + }, + { + "code" : "HP:0000072", + "display" : "Hydroureter" + }, + { + "code" : "HP:0000019", + "display" : "Urinary hesitancy" + }, + { + "code" : "HP:0100771", + "display" : "Hypoperistalsis" + }, + { + "code" : "HP:0000021", + "display" : "Megacystis" + }, + { + "code" : "HP:0004388", + "display" : "Microcolon" + }, + { + "code" : "HP:0005247", + "display" : "Hypoplasia of the abdominal wall musculature" + }, + { + "code" : "HP:0004794", + "display" : "Malrotation of small bowel" + }, + { + "code" : "HP:0000045", + "display" : "Abnormality of the scrotum" + }, + { + "code" : "HP:0002236", + "display" : "Frontal upsweep of hair" + }, + { + "code" : "HP:0000212", + "display" : "Gingival overgrowth" + }, + { + "code" : "HP:0001808", + "display" : "Fragile nails" + }, + { + "code" : "HP:0000225", + "display" : "Gingival bleeding" + }, + { + "code" : "HP:0006009", + "display" : "Broad phalanx" + }, + { + "code" : "HP:0001837", + "display" : "Broad toe" + }, + { + "code" : "HP:0001946", + "display" : "Ketosis" + }, + { + "code" : "HP:0002490", + "display" : "Increased CSF lactate" + }, + { + "code" : "HP:0002922", + "display" : "Increased CSF protein" + }, + { + "code" : "HP:0003128", + "display" : "Lactic acidosis" + }, + { + "code" : "HP:0003111", + "display" : "Abnormal blood ion concentration" + }, + { + "code" : "HP:0032234", + "display" : "Increased circulating creatine kinase MM isoform" + }, + { + "code" : "HP:0003348", + "display" : "Hyperalaninemia" + }, + { + "code" : "HP:0008347", + "display" : "Decreased activity of mitochondrial complex IV" + }, + { + "code" : "HP:0000326", + "display" : "Abnormality of the maxilla" + }, + { + "code" : "HP:0010758", + "display" : "Abnormality of the premaxilla" + }, + { + "code" : "HP:0005681", + "display" : "Juvenile rheumatoid arthritis" + }, + { + "code" : "HP:0000514", + "display" : "Slow saccadic eye movements" + }, + { + "code" : "HP:0002788", + "display" : "Recurrent upper respiratory tract infections" + }, + { + "code" : "HP:0003396", + "display" : "Syringomyelia" + }, + { + "code" : "HP:0003011", + "display" : "Abnormality of the musculature" + }, + { + "code" : "HP:0002098", + "display" : "Respiratory distress" + }, + { + "code" : "HP:0002018", + "display" : "Nausea" + }, + { + "code" : "HP:0002014", + "display" : "Diarrhea" + }, + { + "code" : "HP:0025168", + "display" : "Left ventricular diastolic dysfunction" + }, + { + "code" : "HP:0001679", + "display" : "Abnormal aortic morphology" + }, + { + "code" : "HP:0000159", + "display" : "Abnormal lip morphology" + }, + { + "code" : "HP:0011338", + "display" : "Abnormality of mouth shape" + }, + { + "code" : "HP:0000478", + "display" : "Abnormality of the eye" + }, + { + "code" : "HP:0000154", + "display" : "Wide mouth" + }, + { + "code" : "HP:0001513", + "display" : "Obesity" + }, + { + "code" : "HP:0002475", + "display" : "Myelomeningocele" + }, + { + "code" : "HP:0003765", + "display" : "Psoriasiform dermatitis" + }, + { + "code" : "HP:0010289", + "display" : "Cleft of alveolar ridge of maxilla" + }, + { + "code" : "HP:0003908", + "display" : "Corner fracture of metaphysis" + }, + { + "code" : "HP:0002190", + "display" : "Choroid plexus cyst" + }, + { + "code" : "HP:0004370", + "display" : "Abnormality of temperature regulation" + }, + { + "code" : "HP:0011611", + "display" : "Interrupted aortic arch" + }, + { + "code" : "HP:0000737", + "display" : "Irritability" + }, + { + "code" : "HP:0001344", + "display" : "Absent speech" + }, + { + "code" : "HP:0002376", + "display" : "Developmental regression" + }, + { + "code" : "HP:0002140", + "display" : "Ischemic stroke" + }, + { + "code" : "HP:0001287", + "display" : "Meningitis" + }, + { + "code" : "HP:0002721", + "display" : "Immunodeficiency" + }, + { + "code" : "HP:0000041", + "display" : "Chordee" + }, + { + "code" : "HP:0012854", + "display" : "Midshaft hypospadias" + }, + { + "code" : "HP:0000808", + "display" : "Penoscrotal hypospadias" + }, + { + "code" : "HP:0000048", + "display" : "Bifid scrotum" + }, + { + "code" : "HP:0001047", + "display" : "Atopic dermatitis" + }, + { + "code" : "HP:0001621", + "display" : "Weak voice" + }, + { + "code" : "HP:0002372", + "display" : "Normal interictal EEG" + }, + { + "code" : "HP:0012803", + "display" : "Anisometropia" + }, + { + "code" : "HP:0011386", + "display" : "Narrow internal auditory canal" + }, + { + "code" : "HP:0012714", + "display" : "Severe hearing impairment" + }, + { + "code" : "HP:0006485", + "display" : "Agenesis of incisor" + }, + { + "code" : "HP:0000787", + "display" : "Nephrolithiasis" + }, + { + "code" : "HP:0011332", + "display" : "Hemifacial hypoplasia" + }, + { + "code" : "HP:0001909", + "display" : "Leukemia" + }, + { + "code" : "HP:0004808", + "display" : "Acute myeloid leukemia" + }, + { + "code" : "HP:0006495", + "display" : "Aplasia/Hypoplasia of the ulna" + }, + { + "code" : "HP:0001180", + "display" : "Hand oligodactyly" + }, + { + "code" : "HP:0002991", + "display" : "Abnormality of fibula morphology" + }, + { + "code" : "HP:0001849", + "display" : "Foot oligodactyly" + }, + { + "code" : "HP:0006507", + "display" : "Aplasia/hypoplasia of the humerus" + }, + { + "code" : "HP:0005613", + "display" : "Aplasia/hypoplasia of the femur" + }, + { + "code" : "HP:0006492", + "display" : "Aplasia/Hypoplasia of the fibula" + }, + { + "code" : "HP:0000098", + "display" : "Tall stature" + }, + { + "code" : "HP:0003311", + "display" : "Hypoplasia of the odontoid process" + }, + { + "code" : "HP:0005752", + "display" : "Flattened moderately deformed vertebrae" + }, + { + "code" : "HP:0030039", + "display" : "Fused thoracic vertebrae" + }, + { + "code" : "HP:0003304", + "display" : "Spondylolysis" + }, + { + "code" : "HP:0001659", + "display" : "Aortic regurgitation" + }, + { + "code" : "HP:0002984", + "display" : "Hypoplasia of the radius" + }, + { + "code" : "HP:0009944", + "display" : "Partial duplication of thumb phalanx" + }, + { + "code" : "HP:0005819", + "display" : "Short middle phalanx of finger" + }, + { + "code" : "HP:0002110", + "display" : "Bronchiectasis" + }, + { + "code" : "HP:0001677", + "display" : "Coronary artery atherosclerosis" + }, + { + "code" : "HP:0001737", + "display" : "Pancreatic cysts" + }, + { + "code" : "HP:0005113", + "display" : "Aortic arch aneurysm" + }, + { + "code" : "HP:0003022", + "display" : "Hypoplasia of the ulna" + }, + { + "code" : "HP:0002205", + "display" : "Recurrent respiratory infections" + }, + { + "code" : "HP:0001669", + "display" : "Transposition of the great arteries" + }, + { + "code" : "HP:0001716", + "display" : "Wolff-Parkinson-White syndrome" + }, + { + "code" : "HP:0002758", + "display" : "Osteoarthritis" + }, + { + "code" : "HP:0002037", + "display" : "Inflammation of the large intestine" + }, + { + "code" : "HP:0009892", + "display" : "Anotia" + }, + { + "code" : "HP:0011331", + "display" : "Hemifacial atrophy" + }, + { + "code" : "HP:0009118", + "display" : "Aplasia/Hypoplasia of the mandible" + }, + { + "code" : "HP:0009940", + "display" : "Asymmetry of the mandible" + }, + { + "code" : "HP:0000682", + "display" : "Abnormality of dental enamel" + }, + { + "code" : "HP:0009908", + "display" : "Anterior creases of earlobe" + }, + { + "code" : "HP:0001541", + "display" : "Ascites" + }, + { + "code" : "HP:0006687", + "display" : "Aortic tortuosity" + }, + { + "code" : "HP:0010535", + "display" : "Sleep apnea" + }, + { + "code" : "HP:0100633", + "display" : "Esophagitis" + }, + { + "code" : "HP:0002105", + "display" : "Hemoptysis" + }, + { + "code" : "HP:0002613", + "display" : "Biliary cirrhosis" + }, + { + "code" : "HP:0004469", + "display" : "Chronic bronchitis" + }, + { + "code" : "HP:0002720", + "display" : "Decreased circulating IgA level" + }, + { + "code" : "HP:0002904", + "display" : "Hyperbilirubinemia" + }, + { + "code" : "HP:0003237", + "display" : "Increased circulating IgG level" + }, + { + "code" : "HP:0003262", + "display" : "Smooth muscle antibody positivity" + }, + { + "code" : "HP:0011227", + "display" : "Elevated C-reactive protein level" + }, + { + "code" : "HP:0001852", + "display" : "Sandal gap" + }, + { + "code" : "HP:0004381", + "display" : "Supravalvular aortic stenosis" + }, + { + "code" : "HP:0100700", + "display" : "Abnormal arachnoid mater morphology" + }, + { + "code" : "HP:0002624", + "display" : "Abnormal venous morphology" + }, + { + "code" : "HP:0002289", + "display" : "Alopecia universalis" + }, + { + "code" : "HP:0009588", + "display" : "Vestibular Schwannoma" + }, + { + "code" : "HP:0001648", + "display" : "Cor pulmonale" + }, + { + "code" : "HP:0002091", + "display" : "Restrictive ventilatory defect" + }, + { + "code" : "HP:0002092", + "display" : "Pulmonary arterial hypertension" + }, + { + "code" : "HP:0002113", + "display" : "Pulmonary infiltrates" + }, + { + "code" : "HP:0003138", + "display" : "Increased blood urea nitrogen" + }, + { + "code" : "HP:0003259", + "display" : "Elevated serum creatinine" + }, + { + "code" : "HP:0005180", + "display" : "Tricuspid regurgitation" + }, + { + "code" : "HP:0012585", + "display" : "Renal atrophy" + }, + { + "code" : "HP:0005133", + "display" : "Right ventricular dilatation" + }, + { + "code" : "HP:0005575", + "display" : "Hemolytic-uremic syndrome" + }, + { + "code" : "HP:0001697", + "display" : "Abnormal pericardium morphology" + }, + { + "code" : "HP:0012486", + "display" : "Myelitis" + }, + { + "code" : "HP:0002385", + "display" : "Paraparesis" + }, + { + "code" : "HP:0006706", + "display" : "Cystic liver disease" + }, + { + "code" : "HP:0010880", + "display" : "Increased nuchal translucency" + }, + { + "code" : "HP:0000457", + "display" : "Depressed nasal ridge" + }, + { + "code" : "HP:0002263", + "display" : "Exaggerated cupid's bow" + }, + { + "code" : "HP:0002500", + "display" : "Abnormality of the cerebral white matter" + }, + { + "code" : "HP:0002835", + "display" : "Aspiration" + }, + { + "code" : "HP:0000600", + "display" : "Abnormality of the pharynx" + }, + { + "code" : "HP:0004327", + "display" : "Abnormal vitreous humor morphology" + }, + { + "code" : "HP:0004378", + "display" : "Abnormality of the anus" + }, + { + "code" : "HP:0012374", + "display" : "obsolete Abnormal globe morphology" + }, + { + "code" : "HP:0100768", + "display" : "Choriocarcinoma" + }, + { + "code" : "HP:0030991", + "display" : "Sclerosing cholangitis" + }, + { + "code" : "HP:0006510", + "display" : "Chronic pulmonary obstruction" + }, + { + "code" : "HP:0000710", + "display" : "Hyperorality" + }, + { + "code" : "HP:0001270", + "display" : "Motor delay" + }, + { + "code" : "HP:0001548", + "display" : "Overgrowth" + }, + { + "code" : "HP:0002311", + "display" : "Incoordination" + }, + { + "code" : "HP:0006288", + "display" : "Advanced eruption of teeth" + }, + { + "code" : "HP:0006323", + "display" : "Premature loss of primary teeth" + }, + { + "code" : "HP:0009890", + "display" : "High anterior hairline" + }, + { + "code" : "HP:0100034", + "display" : "Motor tics" + }, + { + "code" : "HP:0100035", + "display" : "Phonic tics" + }, + { + "code" : "HP:0000348", + "display" : "High forehead" + }, + { + "code" : "HP:0001520", + "display" : "Large for gestational age" + }, + { + "code" : "HP:0001239", + "display" : "Wrist flexion contracture" + }, + { + "code" : "HP:0007359", + "display" : "Focal-onset seizure" + }, + { + "code" : "HP:0000430", + "display" : "Underdeveloped nasal alae" + }, + { + "code" : "HP:0007400", + "display" : "Irregular hyperpigmentation" + }, + { + "code" : "HP:0100495", + "display" : "Mastocytosis" + }, + { + "code" : "HP:0012378", + "display" : "Fatigue" + }, + { + "code" : "HP:0002046", + "display" : "Heat intolerance" + }, + { + "code" : "HP:0003270", + "display" : "Abdominal distention" + }, + { + "code" : "HP:0002180", + "display" : "Neurodegeneration" + }, + { + "code" : "HP:0003493", + "display" : "Antinuclear antibody positivity" + }, + { + "code" : "HP:0030057", + "display" : "Autoimmune antibody positivity" + }, + { + "code" : "HP:0006802", + "display" : "Abnormal anterior horn cell morphology" + }, + { + "code" : "HP:0000064", + "display" : "Hypoplastic labia minora" + }, + { + "code" : "HP:0000338", + "display" : "Hypomimic face" + }, + { + "code" : "HP:0001642", + "display" : "Pulmonic stenosis" + }, + { + "code" : "HP:0011344", + "display" : "Severe global developmental delay" + }, + { + "code" : "HP:0200007", + "display" : "Abnormal size of the palpebral fissures" + }, + { + "code" : "HP:0004464", + "display" : "Postauricular pit" + }, + { + "code" : "HP:0000130", + "display" : "Abnormality of the uterus" + }, + { + "code" : "HP:0000137", + "display" : "Abnormality of the ovary" + }, + { + "code" : "HP:0000142", + "display" : "Abnormal vagina morphology" + }, + { + "code" : "HP:0000370", + "display" : "Abnormality of the middle ear" + }, + { + "code" : "HP:0011787", + "display" : "Central hypothyroidism" + }, + { + "code" : "HP:0000274", + "display" : "Small face" + }, + { + "code" : "HP:0000446", + "display" : "Narrow nasal bridge" + }, + { + "code" : "HP:0000622", + "display" : "Blurred vision" + }, + { + "code" : "HP:0001245", + "display" : "Small thenar eminence" + }, + { + "code" : "HP:0009601", + "display" : "Aplasia/Hypoplasia of the thumb" + }, + { + "code" : "HP:0011343", + "display" : "Moderate global developmental delay" + }, + { + "code" : "HP:0000419", + "display" : "Abnormality of the nasal septum" + }, + { + "code" : "HP:0000502", + "display" : "Abnormal conjunctiva morphology" + }, + { + "code" : "HP:0000591", + "display" : "Abnormal sclera morphology" + }, + { + "code" : "HP:0000615", + "display" : "Abnormal pupil morphology" + }, + { + "code" : "HP:0001163", + "display" : "Abnormality of the metacarpal bones" + }, + { + "code" : "HP:0001832", + "display" : "Abnormal metatarsal morphology" + }, + { + "code" : "HP:0001850", + "display" : "Abnormality of the tarsal bones" + }, + { + "code" : "HP:0010490", + "display" : "Abnormality of the palmar creases" + }, + { + "code" : "HP:0010881", + "display" : "Abnormality of the umbilical cord" + }, + { + "code" : "HP:0009113", + "display" : "Diaphragmatic weakness" + }, + { + "code" : "HP:0011664", + "display" : "Left ventricular noncompaction cardiomyopathy" + }, + { + "code" : "HP:0100240", + "display" : "Synostosis of joints" + }, + { + "code" : "HP:0001838", + "display" : "Rocker bottom foot" + }, + { + "code" : "HP:0003717", + "display" : "Minimal subcutaneous fat" + }, + { + "code" : "HP:0001339", + "display" : "Lissencephaly" + }, + { + "code" : "HP:0001591", + "display" : "Bell-shaped thorax" + }, + { + "code" : "HP:0002655", + "display" : "Spondyloepiphyseal dysplasia" + }, + { + "code" : "HP:0002983", + "display" : "Micromelia" + }, + { + "code" : "HP:0003016", + "display" : "Metaphyseal widening" + }, + { + "code" : "HP:0009826", + "display" : "Limb undergrowth" + }, + { + "code" : "HP:0004488", + "display" : "Macrocephaly at birth" + }, + { + "code" : "HP:0001695", + "display" : "Cardiac arrest" + }, + { + "code" : "HP:0001712", + "display" : "Left ventricular hypertrophy" + }, + { + "code" : "HP:0100775", + "display" : "Dural ectasia" + }, + { + "code" : "HP:0000846", + "display" : "Adrenal insufficiency" + }, + { + "code" : "HP:0002925", + "display" : "Increased thyroid-stimulating hormone level" + }, + { + "code" : "HP:0100646", + "display" : "Thyroiditis" + }, + { + "code" : "HP:0000836", + "display" : "Hyperthyroidism" + }, + { + "code" : "HP:0004414", + "display" : "Abnormality of the pulmonary artery" + }, + { + "code" : "HP:0000465", + "display" : "Webbed neck" + }, + { + "code" : "HP:0000723", + "display" : "Restrictive behavior" + }, + { + "code" : "HP:0002253", + "display" : "Colonic diverticula" + }, + { + "code" : "HP:0001310", + "display" : "Dysmetria" + }, + { + "code" : "HP:0000093", + "display" : "Proteinuria" + }, + { + "code" : "HP:0002907", + "display" : "Microscopic hematuria" + }, + { + "code" : "HP:0003073", + "display" : "Hypoalbuminemia" + }, + { + "code" : "HP:0004315", + "display" : "Decreased circulating IgG level" + }, + { + "code" : "HP:0000795", + "display" : "Abnormality of the urethra" + }, + { + "code" : "HP:0001015", + "display" : "Prominent superficial veins" + }, + { + "code" : "HP:0004691", + "display" : "2-3 toe syndactyly" + }, + { + "code" : "HP:0005328", + "display" : "Progeroid facial appearance" + }, + { + "code" : "HP:0005487", + "display" : "Prominent metopic ridge" + }, + { + "code" : "HP:0007552", + "display" : "Abnormal subcutaneous fat tissue distribution" + }, + { + "code" : "HP:0100678", + "display" : "Premature skin wrinkling" + }, + { + "code" : "HP:0031137", + "display" : "Storage in hepatocytes" + }, + { + "code" : "HP:0002521", + "display" : "Hypsarrhythmia" + }, + { + "code" : "HP:0005390", + "display" : "Recurrent opportunistic infections" + }, + { + "code" : "HP:0002716", + "display" : "Lymphadenopathy" + }, + { + "code" : "HP:0005379", + "display" : "obsolete Severe T lymphocytopenia" + }, + { + "code" : "HP:0004432", + "display" : "Agammaglobulinemia" + }, + { + "code" : "HP:0006695", + "display" : "Atrioventricular canal defect" + }, + { + "code" : "HP:0001733", + "display" : "Pancreatitis" + }, + { + "code" : "HP:0002350", + "display" : "Cerebellar cyst" + }, + { + "code" : "HP:0012110", + "display" : "Hypoplasia of the pons" + }, + { + "code" : "HP:0001948", + "display" : "Alkalosis" + }, + { + "code" : "HP:0003113", + "display" : "Hypochloremia" + }, + { + "code" : "HP:0003155", + "display" : "Elevated alkaline phosphatase" + }, + { + "code" : "HP:0003542", + "display" : "Increased serum pyruvate" + }, + { + "code" : "HP:0000421", + "display" : "Epistaxis" + }, + { + "code" : "HP:0200136", + "display" : "Oral-pharyngeal dysphagia" + }, + { + "code" : "HP:0000805", + "display" : "Enuresis" + }, + { + "code" : "HP:0005616", + "display" : "Accelerated skeletal maturation" + }, + { + "code" : "HP:0002459", + "display" : "obsolete Dysautonomia" + }, + { + "code" : "HP:0007302", + "display" : "Bipolar affective disorder" + }, + { + "code" : "HP:0100602", + "display" : "Preeclampsia" + }, + { + "code" : "HP:0100508", + "display" : "Abnormality of vitamin metabolism" + }, + { + "code" : "HP:0001140", + "display" : "Limbal dermoid" + }, + { + "code" : "HP:0000143", + "display" : "Rectovaginal fistula" + }, + { + "code" : "HP:0001746", + "display" : "Asplenia" + }, + { + "code" : "HP:0012715", + "display" : "Profound hearing impairment" + }, + { + "code" : "HP:0001748", + "display" : "Polysplenia" + }, + { + "code" : "HP:0003072", + "display" : "Hypercalcemia" + }, + { + "code" : "HP:0002905", + "display" : "Hyperphosphatemia" + }, + { + "code" : "HP:0002901", + "display" : "Hypocalcemia" + }, + { + "code" : "HP:0001367", + "display" : "Abnormal joint morphology" + }, + { + "code" : "HP:0010562", + "display" : "Keloids" + }, + { + "code" : "HP:0004430", + "display" : "Severe combined immunodeficiency" + }, + { + "code" : "HP:0000003", + "display" : "Multicystic kidney dysplasia" + }, + { + "code" : "HP:0010980", + "display" : "Hyperlipoproteinemia" + }, + { + "code" : "HP:0002155", + "display" : "Hypertriglyceridemia" + }, + { + "code" : "HP:0000520", + "display" : "Proptosis" + }, + { + "code" : "HP:0000180", + "display" : "Lobulated tongue" + }, + { + "code" : "HP:0005486", + "display" : "Small fontanelle" + }, + { + "code" : "HP:0000891", + "display" : "Cervical ribs" + }, + { + "code" : "HP:0002557", + "display" : "Hypoplastic nipples" + }, + { + "code" : "HP:0009112", + "display" : "Aplasia of the left hemidiaphragm" + }, + { + "code" : "HP:0001719", + "display" : "Double outlet right ventricle" + }, + { + "code" : "HP:0001682", + "display" : "Subvalvular aortic stenosis" + }, + { + "code" : "HP:0001667", + "display" : "Right ventricular hypertrophy" + }, + { + "code" : "HP:0002101", + "display" : "Abnormal lung lobation" + }, + { + "code" : "HP:0002202", + "display" : "Pleural effusion" + }, + { + "code" : "HP:0002566", + "display" : "Intestinal malrotation" + }, + { + "code" : "HP:0004510", + "display" : "Pancreatic islet-cell hyperplasia" + }, + { + "code" : "HP:0001747", + "display" : "Accessory spleen" + }, + { + "code" : "HP:0002181", + "display" : "Cerebral edema" + }, + { + "code" : "HP:0000967", + "display" : "Petechiae" + }, + { + "code" : "HP:0009702", + "display" : "Carpal synostosis" + }, + { + "code" : "HP:0000927", + "display" : "Abnormality of skeletal maturation" + }, + { + "code" : "HP:0004348", + "display" : "Abnormality of bone mineral density" + }, + { + "code" : "HP:0003019", + "display" : "Abnormality of the wrist" + }, + { + "code" : "HP:0003063", + "display" : "Abnormality of the humerus" + }, + { + "code" : "HP:0001059", + "display" : "Pterygium" + }, + { + "code" : "HP:0001528", + "display" : "Hemihypertrophy" + }, + { + "code" : "HP:0011228", + "display" : 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"display" : "Impaired oxidative burst" + }, + { + "code" : "HP:0003027", + "display" : "Mesomelia" + }, + { + "code" : "HP:0002754", + "display" : "Osteomyelitis" + }, + { + "code" : "HP:0004431", + "display" : "Complement deficiency" + }, + { + "code" : "HP:0001258", + "display" : "Spastic paraplegia" + }, + { + "code" : "HP:0012811", + "display" : "Wide nasal ridge" + }, + { + "code" : "HP:0011832", + "display" : "Narrow nasal tip" + }, + { + "code" : "HP:0000288", + "display" : "Abnormality of the philtrum" + }, + { + "code" : "HP:0002357", + "display" : "Dysphasia" + }, + { + "code" : "HP:0000871", + "display" : "Panhypopituitarism" + }, + { + "code" : "HP:0000233", + "display" : "Thin vermilion border" + }, + { + "code" : "HP:0003281", + "display" : "Increased serum ferritin" + }, + { + "code" : "HP:0010752", + "display" : "Cleft mandible" + }, + { + "code" : "HP:0000437", + "display" : "Depressed nasal tip" + }, + { + "code" : "HP:0000453", + "display" : "Choanal atresia" + }, + { + "code" : "HP:0000863", + "display" : "Central diabetes insipidus" + }, + { + "code" : "HP:0000058", + "display" : "Abnormality of the labia" + }, + { + "code" : "HP:0007418", + "display" : "Alopecia totalis" + }, + { + "code" : "HP:0100765", + "display" : "Abnormality of the tonsils" + }, + { + "code" : "HP:0100747", + "display" : "Macrodactyly of toe" + }, + { + "code" : "HP:0002109", + "display" : "obsolete Abnormality of the bronchi" + }, + { + "code" : "HP:0011950", + "display" : "Bronchiolitis" + }, + { + "code" : "HP:0002850", + "display" : "Decreased circulating total IgM" + }, + { + "code" : "HP:0001395", + "display" : "Hepatic fibrosis" + }, + { + "code" : "HP:0010701", + "display" : "Abnormal immunoglobulin level" + }, + { + "code" : "HP:0009928", + "display" : "Thick nasal alae" + }, + { + "code" : "HP:0010807", + "display" : "Open bite" + }, + { + "code" : "HP:0002126", + "display" : "Polymicrogyria" + }, + { + "code" : "HP:0002900", + "display" : "Hypokalemia" + }, + { 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"HP:0001283", + "display" : "Bulbar palsy" + }, + { + "code" : "HP:0002080", + "display" : "Intention tremor" + }, + { + "code" : "HP:0002174", + "display" : "Postural tremor" + }, + { + "code" : "HP:0002064", + "display" : "Spastic gait" + }, + { + "code" : "HP:0009800", + "display" : "Maternal diabetes" + }, + { + "code" : "HP:0001662", + "display" : "Bradycardia" + }, + { + "code" : "HP:0006595", + "display" : "Scapulohumeral synostosis" + }, + { + "code" : "HP:0005815", + "display" : "Supernumerary ribs" + }, + { + "code" : "HP:0000307", + "display" : "Pointed chin" + }, + { + "code" : "HP:0012371", + "display" : "Hyperplasia of midface" + }, + { + "code" : "HP:0002643", + "display" : "Neonatal respiratory distress" + }, + { + "code" : "HP:0002093", + "display" : "Respiratory insufficiency" + }, + { + "code" : "HP:0010310", + "display" : "Chylothorax" + }, + { + "code" : "HP:0006376", + "display" : "Limited elbow flexion" + }, + { + "code" : "HP:0006467", + "display" : "Limited 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"display" : "Endometriosis" + }, + { + "code" : "HP:0000123", + "display" : "Nephritis" + }, + { + "code" : "HP:0001974", + "display" : "Leukocytosis" + }, + { + "code" : "HP:0010976", + "display" : "B lymphocytopenia" + }, + { + "code" : "HP:0000010", + "display" : "Recurrent urinary tract infections" + }, + { + "code" : "HP:0100807", + "display" : "Long fingers" + }, + { + "code" : "HP:0000653", + "display" : "Sparse eyelashes" + }, + { + "code" : "HP:0000171", + "display" : "Microglossia" + }, + { + "code" : "HP:0002575", + "display" : "Tracheoesophageal fistula" + }, + { + "code" : "HP:0009933", + "display" : "Narrow naris" + }, + { + "code" : "HP:0000883", + "display" : "Thin ribs" + }, + { + "code" : "HP:0000121", + "display" : "Nephrocalcinosis" + }, + { + "code" : "HP:0001349", + "display" : "Facial diplegia" + }, + { + "code" : "HP:0012037", + "display" : "Pectoralis amyotrophy" + }, + { + "code" : "HP:0100560", + "display" : "Upper limb asymmetry" + }, + { + "code" : 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"display" : "Colorectal polyposis" + }, + { + "code" : "HP:0001762", + "display" : "Talipes equinovarus" + }, + { + "code" : "HP:0000056", + "display" : "Abnormality of the clitoris" + }, + { + "code" : "HP:0008655", + "display" : "Aplasia/Hypoplasia of the fallopian tube" + }, + { + "code" : "HP:0002072", + "display" : "Chorea" + }, + { + "code" : "HP:0008734", + "display" : "Decreased testicular size" + }, + { + "code" : "HP:0002136", + "display" : "Broad-based gait" + }, + { + "code" : "HP:0010958", + "display" : "Bilateral renal agenesis" + }, + { + "code" : "HP:0002510", + "display" : "Spastic tetraplegia" + }, + { + "code" : "HP:0003234", + "display" : "Decreased plasma carnitine" + }, + { + "code" : "HP:0000720", + "display" : "Mood swings" + }, + { + "code" : "HP:0012638", + "display" : "Abnormal nervous system physiology" + }, + { + "code" : "HP:0002803", + "display" : "Congenital contracture" + }, + { + "code" : "HP:0000152", + "display" : "Abnormality of head or neck" + }, + 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"HP:0004439", + "display" : "Craniofacial dysostosis" + }, + { + "code" : "HP:0012443", + "display" : "Abnormality of brain morphology" + }, + { + "code" : "HP:0000202", + "display" : "Oral cleft" + }, + { + "code" : "HP:0011842", + "display" : "Abnormality of skeletal morphology" + }, + { + "code" : "HP:0003808", + "display" : "Abnormal muscle tone" + }, + { + "code" : "HP:0001574", + "display" : "Abnormality of the integument" + }, + { + "code" : "HP:0030056", + "display" : "Uncombable hair" + }, + { + "code" : "HP:0003549", + "display" : "Abnormality of connective tissue" + }, + { + "code" : "HP:0030875", + "display" : "Abnormality of pulmonary circulation" + }, + { + "code" : "HP:0000118", + "display" : "Phenotypic abnormality" + }, + { + "code" : "HP:0012469", + "display" : "Infantile spasms" + }, + { + "code" : "HP:0032894", + "display" : "Seizure precipitated by febrile infection" + }, + { + "code" : "HP:0100661", + "display" : "Trigeminal neuralgia" + }, + { + "code" : 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}, + { + "code" : "HP:0009804", + "display" : "Reduced number of teeth" + }, + { + "code" : "HP:0000548", + "display" : "Cone/cone-rod dystrophy" + }, + { + "code" : "HP:0000546", + "display" : "Retinal degeneration" + }, + { + "code" : "HP:0008002", + "display" : "Abnormality of macular pigmentation" + }, + { + "code" : "HP:0000608", + "display" : "Macular degeneration" + }, + { + "code" : "HP:0030611", + "display" : "Retinal pigment epithelial loss on macular OCT" + }, + { + "code" : "HP:0001135", + "display" : "Chorioretinal dystrophy" + }, + { + "code" : "HP:0030468", + "display" : "Abnormal multifocal electroretinogram" + }, + { + "code" : "HP:00030532", + "display" : "Visual acuity test abnormality" + }, + { + "code" : "HP:0007401", + "display" : "Macular atrophy" + }, + { + "code" : "HP:0030466", + "display" : "Abnormal full-field electroretinogram" + }, + { + "code" : "HP:007737", + "display" : "Bone spicule pigmentation of the retina" + }, + { + "code" : "HP:0011342", + "display" : "Mild global developmental delay" + }, + { + "code" : "HP:0030610", + "display" : "Photoreceptor outer segment loss on macular OCT" + }, + { + "code" : "HP:0007722", + "display" : "Retinal pigment epithelial atrophy" + }, + { + "code" : "HP:0030493", + "display" : "Abnormality of foveal pigmentation" + }, + { + "code" : "HP:0007843", + "display" : "Attenuation of retinal blood vessels" + }, + { + "code" : "HP:0007754", + "display" : "Macular dystrophy" + }, + { + "code" : "HP:0011509", + "display" : "Macular hyperpigmentation" + }, + { + "code" : "HP:0008527", + "display" : "Congenital sensorineural hearing impairment" + }, + { + "code" : "HP:0200070", + "display" : "Peripheral retinal atrophy" + }, + { + "code" : "HP:0007793", + "display" : "Granular macular appearance" + }, + { + "code" : "HP:0007987", + "display" : "Progressive visual field defects" + }, + { + "code" : "HP:0100817", + "display" : "Renovascular hypertension" + }, + { + "code" : "HP:0007868", + "display" : "obsolete Age-related macular degeneration" + }, + { + "code" : "HP:0030527", + "display" : "Very severe constriction of peripheral visual field" + }, + { + "code" : "HP:0030551", + "display" : "Visual acuity light perception with projection" + }, + { + "code" : "HP:0011505", + "display" : "Cystoid macular edema" + }, + { + "code" : "HP:0010442", + "display" : "Polydactyly" + }, + { + "code" : "HP:0007642", + "display" : "Congenital stationary night blindness" + }, + { + "code" : "HP:0009073", + "display" : "Progressive proximal muscle weakness" + }, + { + "code" : "HP:0003741", + "display" : "Congenital muscular dystrophy" + }, + { + "code" : "HP:0100299", + "display" : "Muscle fiber inclusion bodies" + }, + { + "code" : "HP:0003540", + "display" : "Impaired platelet aggregation" + }, + { + "code" : "HP:0010489", + "display" : "Absent palmar crease" + }, + { + "code" : "HP:0009824", + "display" : "Upper limb undergrowth" + }, + { + "code" : "HP:0002395", + "display" : "Lower limb 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+ "code" : "HP:0002068", + "display" : "Neuromuscular dysphagia" + }, + { + "code" : "HP:0001002", + "display" : "obsolete Decreased subcutaneous fat" + }, + { + "code" : "HP:0002880", + "display" : "obsolete Respiratory difficulties" + }, + { + "code" : "HP:0006829", + "display" : "Severe muscular hypotonia" + }, + { + "code" : "HP:0011448", + "display" : "Ankle clonus" + }, + { + "code" : "HP:0003487", + "display" : "Babinski sign" + }, + { + "code" : "HP:0002378", + "display" : "Hand tremor" + }, + { + "code" : "HP:0002747", + "display" : "Respiratory insufficiency due to muscle weakness" + }, + { + "code" : "HP:0002579", + "display" : "Gastrointestinal dysmotility" + }, + { + "code" : "HP:0001041", + "display" : "Facial erythema" + }, + { + "code" : "HP:0040180", + "display" : "Hyperkeratosis pilaris" + }, + { + "code" : "HP:0001382", + "display" : "Joint hypermobility" + }, + { + "code" : "HP:0003722", + "display" : "Neck flexor weakness" + }, + { + "code" : "HP:0003323", + "display" : "Progressive muscle weakness" + }, + { + "code" : "HP:0002380", + "display" : "Fasciculations" + }, + { + "code" : "HP:0012785", + "display" : "Flexion contracture of finger" + }, + { + "code" : "HP:0007936", + "display" : "Restrictive external ophthalmoplegia" + }, + { + "code" : "HP:0030319", + "display" : "Weakness of facial musculature" + }, + { + "code" : "HP:0008936", + "display" : "Muscular hypotonia of the trunk" + }, + { + "code" : "HP:0030230", + "display" : "Central core regions in muscle fibers" + }, + { + "code" : "HP:0011471", + "display" : "Gastrostomy tube feeding in infancy" + }, + { + "code" : "HP:0001290", + "display" : "Generalized hypotonia" + }, + { + "code" : "HP:0002421", + "display" : "Poor head control" + }, + { + "code" : "HP:0010301", + "display" : "Spinal dysraphism" + }, + { + "code" : "HP:0004303", + "display" : "Abnormal muscle fiber morphology" + }, + { + "code" : "HP:0009046", + "display" : "Difficulty running" + }, + { + "code" : "HP:0003715", + "display" : "Myofibrillar myopathy" + }, + { + "code" : "HP:0000467", + "display" : "Neck muscle weakness" + }, + { + "code" : "HP:0001999", + "display" : "Abnormal facial shape" + }, + { + "code" : "HP:0002751", + "display" : "Kyphoscoliosis" + }, + { + "code" : "HP:0030223", + "display" : "Perseveration" + }, + { + "code" : "HP:0002344", + "display" : "Progressive neurologic deterioration" + }, + { + "code" : "HP:0002522", + "display" : "Areflexia of lower limbs" + }, + { + "code" : "HP:0003805", + "display" : "Rimmed vacuoles" + }, + { + "code" : "HP:0005781", + "display" : "Contractures of the large joints" + }, + { + "code" : "HP:0040083", + "display" : "Toe walking" + }, + { + "code" : "HP:0003749", + "display" : "Pelvic girdle muscle weakness" + }, + { + "code" : "HP:0012444", + "display" : "Brain atrophy" + }, + { + "code" : "HP:0003738", + "display" : "Exercise-induced myalgia" + }, + { + "code" : "HP:0003756", + "display" : "Skeletal myopathy" + }, + { + "code" : "HP:0002492", + "display" : "Morphological abnormality of the corticospinal tract" + }, + { + "code" : "HP:0100302", + "display" : "Muscle fiber tubuloreticular inclusions" + }, + { + "code" : "HP:0006817", + "display" : "Aplasia/Hypoplasia of the cerebellar vermis" + }, + { + "code" : "HP:0003473", + "display" : "Fatigable weakness" + }, + { + "code" : "HP:0002077", + "display" : "Migraine with aura" + }, + { + "code" : "HP:0100559", + "display" : "Lower limb asymmetry" + }, + { + "code" : "HP:0002079", + "display" : "Hypoplasia of the corpus callosum" + }, + { + "code" : "HP:0002804", + "display" : "Arthrogryposis multiplex congenita" + }, + { + "code" : "HP:0011623", + "display" : "Muscular ventricular septal defect" + }, + { + "code" : "HP:0002191", + "display" : "Progressive spasticity" + }, + { + "code" : "HP:0003390", + "display" : "Sensory axonal neuropathy" + }, + { + "code" : "HP:0006986", + "display" : "Upper limb spasticity" + }, + { + "code" : "HP:0002464", + "display" : "Spastic dysarthria" + }, + { + "code" : "HP:0001308", + "display" : "Tongue fasciculations" + }, + { + "code" : "HP:0007010", + "display" : "Poor fine motor coordination" + }, + { + "code" : "HP:0003737", + "display" : "Mitochondrial myopathy" + }, + { + "code" : "HP:0008012", + "display" : "obsolete Congenital myopia" + }, + { + "code" : "HP:0008872", + "display" : "Feeding difficulties in infancy" + }, + { + "code" : "HP:0005750", + "display" : "Contractures of the joints of the lower limbs" + }, + { + "code" : "HP:0009067", + "display" : "Progressive spinal muscular atrophy" + }, + { + "code" : "HP:0001623", + "display" : "Breech presentation" + }, + { + "code" : "HP:0001374", + "display" : "Congenital hip dislocation" + }, + { + "code" : "HP:0002359", + "display" : "Frequent falls" + }, + { + "code" : "HP:0003803", + "display" : "Type 1 muscle fiber predominance" + }, + { + "code" : "HP:0011410", + "display" : "Caesarian section" + }, + { + "code" : "HP:0008947", + "display" : "Infantile muscular hypotonia" + }, + { + "code" : "HP:0100501", + "display" : "Recurrent bronchiolitis" + }, + { + "code" : "HP:0003789", + "display" : "Minicore myopathy" + }, + { + "code" : "HP:0000544", + "display" : "External ophthalmoplegia" + }, + { + "code" : "HP:0001605", + "display" : "Vocal cord paralysis" + }, + { + "code" : "HP:0003712", + "display" : "Skeletal muscle hypertrophy" + }, + { + "code" : "HP:0012507", + "display" : "Weakness of orbicularis oculi muscle" + }, + { + "code" : "HP:0009816", + "display" : "Lower limb undergrowth" + }, + { + "code" : "HP:0008935", + "display" : "Generalized neonatal hypotonia" + }, + { + "code" : "HP:0003484", + "display" : "Upper limb muscle weakness" + }, + { + "code" : "HP:0008331", + "display" : "Elevated creatine kinase after exercise" + }, + { + "code" : "HP:0001315", + "display" : "Reduced tendon reflexes" + }, + { + "code" : "HP:0012473", + "display" : "Tongue atrophy" + }, + { + "code" : "HP:0003273", + "display" : "Hip contracture" + }, + { + "code" : "HP:0006380", + "display" : "Knee flexion contracture" + }, + { + "code" : "HP:0003752", + "display" : "Episodic flaccid weakness" + }, + { + "code" : "HP:0100298", + "display" : "Motheaten muscle fibers" + }, + { + "code" : "HP:0003693", + "display" : "Distal amyotrophy" + }, + { + "code" : "HP:0002167", + "display" : "Neurological speech impairment" + }, + { + "code" : "HP:0003388", + "display" : "Easy fatigability" + }, + { + "code" : "HP:0001348", + "display" : "Brisk reflexes" + }, + { + "code" : "HP:0003445", + "display" : "EMG: neuropathic changes" + }, + { + "code" : "HP:0009063", + "display" : "Progressive distal muscle weakness" + }, + { + "code" : "HP:0003720", + "display" : "Generalized muscle hypertrophy" + }, + { + "code" : "HP:0002493", + "display" : "Upper motor neuron dysfunction" + }, + { + "code" : "HP:0012448", + "display" : "Delayed myelination" + }, + { + "code" : "HP:0001338", + "display" : "Partial agenesis of the corpus callosum" + }, + { + "code" : "HP:0006879", + "display" : "Pontocerebellar atrophy" + }, + { + "code" : "HP:0200101", + "display" : "Decreased/absent ankle reflexes" + }, + { + "code" : "HP:0009020", + "display" : "Exercise-induced muscle fatigue" + }, + { + "code" : "HP:0002067", + "display" : "Bradykinesia" + }, + { + "code" : "HP:0012751", + "display" : "Abnormal basal ganglia MRI signal intensity" + }, + { + "code" : "HP:0003355", + "display" : "Aminoaciduria" + }, + { + "code" : "HP:0012450", + "display" : "Chronic constipation" + }, + { + "code" : "HP:0011834", + "display" : "Moyamoya phenomenon" + }, + { + "code" : "HP:0001297", + "display" : "Stroke" + }, + { + "code" : "HP:0200049", + "display" : "Upper limb hypertonia" + }, + { + "code" : "HP:0008981", + "display" : "Calf muscle hypertrophy" + }, + { + "code" : "HP:0006785", + "display" : "Limb-girdle muscular dystrophy" + }, + { + "code" : "HP:0006957", + "display" : "Loss of ability to walk" + }, + { + "code" : "HP:0030098", + "display" : "Reduced muscle dystrophin expression" + }, + { + "code" : "HP:0030115", + "display" : "Reduced muscle fiber dysferlin" + }, + { + "code" : "HP:0002058", + "display" : "Myopathic facies" + }, + { + "code" : "HP:0007858", + "display" : "Chorioretinal lacunae" + }, + { + "code" : "HP:0006657", + "display" : "Hypoplasia of first ribs" + }, + { + "code" : "HP:0007165", + "display" : "Periventricular heterotopia" + }, + { + "code" : "HP:0009779", + "display" : "3-4 toe syndactyly" + }, + { + "code" : "HP:0010665", + "display" : "Bilateral coxa valga" + }, + { + "code" : "HP:0007598", + "display" : "Bilateral single transverse palmar creases" + }, + { + "code" : "HP:0006101", + "display" : "Finger syndactyly" + }, + { + "code" : "HP:0010511", + "display" : "Long toe" + }, + { + "code" : "HP:0002370", + "display" : "Poor coordination" + }, + { + "code" : "HP:0000480", + "display" : "Retinal coloboma" + }, + { + "code" : "HP:0001770", + "display" : "Toe syndactyly" + }, + { + "code" : "HP:0010851", + "display" : "EEG with burst suppression" + }, + { + "code" : "HP:0002791", + "display" : "Hypoventilation" + }, + { + "code" : "HP:0040075", + "display" : "Hypopituitarism" + }, + { + "code" : "HP:0012506", + "display" : "Small pituitary gland" + }, + { + "code" : "HP:0000538", + "display" : "Pseudopapilledema" + }, + { + "code" : "HP:0012717", + "display" : "Severe conductive hearing impairment" + }, + { + "code" : "HP:0001370", + "display" : "Rheumatoid arthritis" + }, + { + "code" : "HP:0000016", + "display" : "Urinary retention" + }, + { + "code" : "HP:0012537", + "display" : "Food intolerance" + }, + { + "code" : "HP:0011297", + "display" : "Abnormal digit morphology" + }, + { + "code" : "HP:0001273", + "display" : "Abnormal corpus callosum morphology" + }, + { + "code" : "HP:0030148", + "display" : "Heart murmur" + }, + { + "code" : "HP:0045018", + "display" : "Partial duplication of eyebrows" + }, + { + "code" : "HP:0008998", + "display" : "Pectoralis hypoplasia" + }, + { + "code" : "HP:0001707", + "display" : "Abnormal right ventricle morphology" + }, + { + "code" : "HP:0001540", + "display" : "Diastasis recti" + }, + { + "code" : "HP:0100693", + "display" : "Iridodonesis" + }, + { + "code" : "HP:0002265", + "display" : "Large fleshy ears" + }, + { + "code" : "HP:0001132", + "display" : "Lens subluxation" + }, + { + "code" : "HP:0004927", + "display" : "Pulmonary artery dilatation" + }, + { + "code" : "HP:0005619", + "display" : "Thoracolumbar kyphosis" + }, + { + "code" : "HP:0008619", + "display" : "Bilateral sensorineural hearing impairment" + }, + { + "code" : "HP:0001045", + "display" : "Vitiligo" + }, + { + "code" : "HP:0009124", + "display" : "Abnormal adipose tissue morphology" + }, + { + "code" : "HP:0002979", + "display" : "Bowing of the legs" + }, + { + "code" : "HP:0000455", + "display" : "Broad nasal tip" + }, + { + "code" : "HP:0001007", + "display" : "Hirsutism" + }, + { + "code" : "HP:0010314", + "display" : "Premature thelarche" + }, + { + "code" : "HP:0000075", + "display" : "Renal duplication" + }, + { + "code" : "HP:0000368", + "display" : "Low-set, posteriorly rotated ears" + }, + { + "code" : "HP:0001052", + "display" : "Nevus flammeus" + }, + { + "code" : "HP:0200048", + "display" : "Cyanotic episode" + }, + { + "code" : "HP:0001902", + "display" : "Giant platelets" + }, + { + "code" : "HP:0030043", + "display" : "Hip subluxation" + }, + { + "code" : "HP:0002938", + "display" : "Lumbar hyperlordosis" + }, + { + "code" : "HP:0030084", + "display" : "Clinodactyly" + }, + { + "code" : "HP:0005560", + "display" : "Imbalanced hemoglobin synthesis" + }, + { + "code" : "HP:0001539", + "display" : "Omphalocele" + }, + { + "code" : "HP:0009778", + "display" : "Short thumb" + }, + { + "code" : "HP:0002277", + "display" : "Horner syndrome" + }, + { + "code" : "HP:0011701", + "display" : "Multifocal atrial tachycardia" + }, + { + "code" : "HP:0005274", + "display" : "Prominent nasal tip" + }, + { + "code" : "HP:0001262", + "display" : "Excessive daytime somnolence" + }, + { + "code" : "HP:0001285", + "display" : "Spastic tetraparesis" + }, + { + "code" : "HP:0012171", + "display" : "Stereotypical hand wringing" + }, + { + "code" : "HP:0002518", + "display" : "Abnormality of the periventricular white matter" + }, + { + "code" : "HP:0005692", + "display" : "Joint hyperflexibility" + }, + { + "code" : "HP:0007440", + "display" : "Generalized hyperpigmentation" + }, + { + "code" : "HP:0001805", + "display" : "Onychogryposis" + }, + { + "code" : "HP:0011945", + "display" : "Bronchiolitis obliterans organizing pneumonia" + }, + { + "code" : "HP:0003763", + "display" : "Bruxism" + }, + { + "code" : "HP:0010500", + "display" : "Hyperextensibility of the knee" + }, + { + "code" : "HP:0040115", + "display" : "Abnormality of the Eustachian tube" + }, + { + "code" : "HP:0008751", + "display" : "Laryngeal cleft" + }, + { + "code" : "HP:0000403", + "display" : "Recurrent otitis media" + }, + { + "code" : "HP:0001787", + "display" : "Abnormal delivery" + }, + { + "code" : "HP:0002571", + "display" : "Achalasia" + }, + { + "code" : "HP:0002615", + "display" : "Hypotension" + }, + { + "code" : "HP:0003550", + "display" : "Predominantly lower limb lymphedema" + }, + { + "code" : "HP:0030363", + "display" : "Primary Caesarian section" + }, + { + "code" : "HP:0001727", + "display" : "Thromboembolic stroke" + }, + { + "code" : "HP:0100603", + "display" : "Toxemia of pregnancy" + }, + { + "code" : "HP:0010836", + "display" : "Abnormal circulating copper concentration" + }, + { + "code" : "HP:0000356", + "display" : "Abnormality of the outer ear" + }, + { + "code" : "HP:0002197", + "display" : "Generalized-onset seizure" + }, + { + "code" : "HP:0011436", + "display" : "Abnormal maternal serum screening" + }, + { + "code" : "HP:0003517", + "display" : "Birth length greater than 97th percentile" + }, + { + "code" : "HP:0003561", + "display" : "Birth length less than 3rd percentile" + }, + { + "code" : "HP:0012188", + "display" : "Hyperemesis gravidarum" + }, + { + "code" : "HP:0010519", + "display" : "Increased fetal movement" + }, + { + "code" : "HP:0030244", + "display" : "Maternal fever in pregnancy" + }, + { + "code" : "HP:0008071", + "display" : "Maternal hypertension" + }, + { + "code" : "HP:0100622", + "display" : "Maternal seizure" + }, + { + "code" : "HP:0011438", + "display" : "Maternal teratogenic exposure" + }, + { + "code" : "HP:0001998", + "display" : "Neonatal hypoglycemia" + }, + { + "code" : "HP:0040187", + "display" : "Neonatal sepsis" + }, + { + "code" : "HP:0002033", + "display" : "Poor suck" + }, + { + "code" : "HP:0006579", + "display" : "Prolonged neonatal jaundice" + }, + { + "code" : "HP:0001724", + "display" : "obsolete Aortic dilatation" + }, + { + "code" : "HP:0010621", + "display" : "Cutaneous syndactyly of toes" + }, + { + "code" : "HP:0001880", + "display" : "Eosinophilia" + }, + { + "code" : "HP:0000162", + "display" : "Glossoptosis" + }, + { + "code" : "HP:0100578", + "display" : "Lipoatrophy" + }, + { + "code" : "HP:0002562", + "display" : "Low-set nipples" + }, + { + "code" : "HP:0012893", + "display" : "Neck muscle hypertrophy" + }, + { + "code" : "HP:0001027", + "display" : "Soft, doughy skin" + }, + { + "code" : "HP:0100738", + "display" : "Abnormal eating behavior" + }, + { + "code" : "HP:0007328", + "display" : "Impaired pain sensation" + }, + { + "code" : "HP:0002878", + "display" : "Respiratory failure" + }, + { + "code" : "HP:0001776", + "display" : "Bilateral talipes equinovarus" + }, + { + "code" : "HP:0001360", + "display" : "Holoprosencephaly" + }, + { + "code" : "HP:0001973", + "display" : "Autoimmune thrombocytopenia" + }, + { + "code" : "HP:0100749", + "display" : "Chest pain" + }, + { + "code" : "HP:0012531", + "display" : "Pain" + }, + { + "code" : "HP:0007585", + "display" : "Skin fragility with non-scarring blistering" + }, + { + "code" : "HP:0002108", + "display" : "Spontaneous pneumothorax" + }, + { + "code" : "HP:0006562", + "display" : "Viral hepatitis" + }, + { + "code" : "HP:0012647", + "display" : "Abnormal inflammatory response" + }, + { + "code" : "HP:0012088", + "display" : "Abnormal urinary odor" + }, + { + "code" : "HP:0011458", + "display" : "Abdominal symptom" + }, + { + "code" : "HP:0002829", + "display" : "Arthralgia" + }, + { + "code" : "HP:0010783", + "display" : "Erythema" + }, + { + "code" : "HP:0010307", + "display" : "Stridor" + }, + { + "code" : "HP:0001269", + "display" : "Hemiparesis" + }, + { + "code" : "HP:0006532", + "display" : "Recurrent pneumonia" + }, + { + "code" : "HP:0002580", + "display" : "Volvulus" + }, + { + "code" : "HP:0012387", + "display" : "Bronchitis" + }, + { + "code" : "HP:0001266", + "display" : "Choreoathetosis" + }, + { + "code" : "HP:0001531", + "display" : "Failure to thrive in infancy" + }, + { + "code" : "HP:0011470", + "display" : "Nasogastric tube feeding in infancy" + }, + { + "code" : "HP:0001361", + "display" : "Nystagmus-induced head nodding" + }, + { + "code" : "HP:0001997", + "display" : "Gout" + }, + { + "code" : "HP:0000965", + "display" : "Cutis marmorata" + }, + { + "code" : "HP:0010316", + "display" : "Ebstein anomaly of the tricuspid valve" + }, + { + "code" : "HP:0010543", + "display" : "Opsoclonus" + }, + { + "code" : "HP:0007704", + "display" : "Paroxysmal involuntary eye movements" + }, + { + "code" : "HP:0030364", + "display" : "Secondary Caesarian section" + }, + { + "code" : "HP:0007738", + "display" : "Uncontrolled eye movements" + }, + { + "code" : "HP:0030366", + "display" : "Delivery by Odon device" + }, + { + "code" : "HP:0011411", + "display" : "Forceps delivery" + }, + { + "code" : "HP:0030369", + "display" : "Induced vaginal delivery" + }, + { + "code" : "HP:0005268", + "display" : "Spontaneous abortion" + }, + { + "code" : "HP:0030365", + "display" : "Vaginal birth after Caesarian" + }, + { + "code" : "HP:0011412", + "display" : "Ventouse delivery" + }, + { + "code" : "HP:0002572", + "display" : "Episodic vomiting" + }, + { + "code" : "HP:0030350", + "display" : "Erythematous papule" + }, + { + "code" : "HP:0001386", + "display" : "Joint swelling" + }, + { + "code" : "HP:0000147", + "display" : "Polycystic ovaries" + }, + { + "code" : "HP:0012412", + "display" : "Premature adrenarche" + }, + { + "code" : "HP:0004411", + "display" : "Deviated nasal septum" + }, + { + "code" : "HP:0040183", + "display" : "Encopresis" + }, + { + "code" : "HP:0100507", + "display" : "Reduced blood folate concentration" + }, + { + "code" : "HP:0007011", + "display" : "Fourth cranial nerve palsy" + }, + { + "code" : "HP:0000375", + "display" : "Abnormal cochlea morphology" + }, + { + "code" : "HP:0009911", + "display" : "Abnormal temporal bone morphology" + }, + { + "code" : "HP:0000081", + "display" : "Duplicated collecting system" + }, + { + "code" : "HP:0006894", + "display" : "Hypoplastic olfactory lobes" + }, + { + "code" : "HP:0011380", + "display" : "Morphological abnormality of the semicircular canal" + }, + { + "code" : "HP:0000110", + "display" : "Renal dysplasia" + }, + { + "code" : "HP:0030025", + "display" : "Auricular pit" + }, + { + "code" : "HP:0010044", + "display" : "Short 4th metacarpal" + }, + { + "code" : "HP:0010047", + "display" : "Short 5th metacarpal" + }, + { + "code" : "HP:0000201", + "display" : "Pierre-Robin sequence" + }, + { + "code" : "HP:0100837", + "display" : "Atrophodermia vermiculata" + }, + { + "code" : "HP:0002673", + "display" : "Coxa valga" + }, + { + "code" : "HP:0001476", + "display" : "Delayed closure of the anterior fontanelle" + }, + { + "code" : "HP:0011069", + "display" : "Increased number of teeth" + }, + { + "code" : "HP:0009879", + "display" : "Simplified gyral pattern" + }, + { + "code" : "HP:0006315", + "display" : "Single median maxillary incisor" + }, + { + "code" : "HP:0001194", + "display" : "Abnormalities of placenta or umbilical cord" + }, + { + "code" : "HP:0100767", + "display" : "Abnormal placenta morphology" + }, + { + "code" : "HP:0006543", + "display" : "Cardiorespiratory arrest" + }, + { + "code" : "HP:0003074", + "display" : "Hyperglycemia" + }, + { + "code" : "HP:0000842", + "display" : "Hyperinsulinemia" + }, + { + "code" : "HP:0011951", + "display" : "Aspiration pneumonia" + }, + { + "code" : "HP:0006528", + "display" : "Chronic lung disease" + }, + { + "code" : "HP:0002383", + "display" : "Encephalitis" + }, + { + "code" : "HP:0000388", + "display" : "Otitis media" + }, + { + "code" : "HP:0002530", + "display" : "Axial dystonia" + }, + { + "code" : "HP:0002780", + "display" : "Bronchomalacia" + }, + { + "code" : "HP:0008755", + "display" : "Laryngotracheomalacia" + }, + { + "code" : "HP:0000308", + "display" : "Microretrognathia" + }, + { + "code" : "HP:0002786", + "display" : "Tracheobronchomalacia" + }, + { + "code" : "HP:0012389", + "display" : "Appendicular hypotonia" + }, + { + "code" : "HP:0011323", + "display" : "Cleft of chin" + }, + { + "code" : "HP:0000417", + "display" : "Slender nose" + }, + { + "code" : "HP:0001863", + "display" : "Toe clinodactyly" + }, + { + "code" : "HP:0008386", + "display" : "Aplasia/Hypoplasia of the nails" + }, + { + "code" : "HP:0006989", + "display" : "Dysplastic corpus callosum" + }, + { + "code" : "HP:0100954", + "display" : "Open operculum" + }, + { + "code" : "HP:0004482", + "display" : "Relative macrocephaly" + }, + { + "code" : "HP:3000033", + "display" : "Abnormal nasopharyngeal adenoid morphology" + }, + { + "code" : "HP:0009062", + "display" : "Infantile axial hypotonia" + }, + { + "code" : "HP:0002189", + "display" : "obsolete Excessive daytime sleepiness" + }, + { + "code" : "HP:0002141", + "display" : "Gait imbalance" + }, + { + "code" : "HP:0012734", + "display" : "Ketotic hypoglycemia" + }, + { + "code" : "HP:0005968", + "display" : "Temperature instability" + }, + { + "code" : "HP:0012538", + "display" : "Gluten intolerance" + }, + { + "code" : "HP:0000979", + "display" : "Purpura" + }, + { + "code" : "HP:0001988", + "display" : "Recurrent hypoglycemia" + }, + { + "code" : "HP:0001488", + "display" : "Bilateral ptosis" + }, + { + "code" : "HP:0011229", + "display" : "Broad eyebrow" + }, + { + "code" : "HP:0004440", + "display" : "Coronal craniosynostosis" + }, + { + "code" : "HP:0004453", + "display" : "Overfolding of the superior helices" + }, + { + "code" : "HP:0012547", + "display" : "Abnormal involuntary eye movements" + }, + { + "code" : "HP:0100814", + "display" : "Blue nevus" + }, + { + "code" : "HP:0010751", + "display" : "Dimple chin" + }, + { + "code" : "HP:0007087", + "display" : "obsolete Involuntary jerking movements" + }, + { + "code" : "HP:0012498", + "display" : "Nuchal cord" + }, + { + "code" : "HP:0002472", + "display" : "Small cerebral cortex" + }, + { + "code" : "HP:0100307", + "display" : "Cerebellar hemisphere hypoplasia" + }, + { + "code" : "HP:0002151", + "display" : "Increased serum lactate" + }, + { + "code" : "HP:0001698", + "display" : "Pericardial effusion" + }, + { + "code" : "HP:0006903", + "display" : "Congenital peripheral neuropathy" + }, + { + "code" : "HP:0006895", + "display" : "Lower limb hypertonia" + }, + { + "code" : "HP:0002744", + "display" : "Bilateral cleft lip and palate" + }, + { + "code" : "HP:0010664", + "display" : "Fusion of the left and right thalami" + }, + { + "code" : "HP:0000327", + "display" : "Hypoplasia of the maxilla" + }, + { + "code" : "HP:0000474", + "display" : "Thickened nuchal skin fold" + }, + { + "code" : "HP:0000105", + "display" : "Enlarged kidney" + }, + { + "code" : "HP:0000113", + "display" : "Polycystic kidney dysplasia" + }, + { + "code" : "HP:0000104", + "display" : "Renal agenesis" + }, + { + "code" : "HP:0001362", + "display" : "Calvarial skull defect" + }, + { + "code" : "HP:0008245", + "display" : "Pituitary hypothyroidism" + }, + { + "code" : "HP:0001552", + "display" : "Barrel-shaped chest" + }, + { + "code" : "HP:0006297", + "display" : "Hypoplasia of dental enamel" + }, + { + "code" : "HP:0100023", + "display" : "Recurrent hand flapping" + }, + { + "code" : "HP:0005518", + "display" : "Increased mean corpuscular volume" + }, + { + "code" : "HP:0012418", + "display" : "Hypoxemia" + }, + { + "code" : "HP:0100259", + "display" : "Postaxial polydactyly" + }, + { + "code" : "HP:0010814", + "display" : "Abnormal position of hair whorl" + }, + { + "code" : "HP:0003764", + "display" : "Nevus" + }, + { + "code" : "HP:0000445", + "display" : "Wide nose" + }, + { + "code" : "HP:0010677", + "display" : "Enuresis nocturna" + }, + { + "code" : "HP:0001510", + "display" : "Growth delay" + }, + { + "code" : "HP:0012428", + "display" : "Prominent calcaneus" + }, + { + "code" : "HP:0012471", + "display" : "Thick vermilion border" + }, + { + "code" : "HP:0007110", + "display" : "Central hypoventilation" + }, + { + "code" : "HP:0010614", + "display" : "Fibroma" + }, + { + "code" : "HP:0001034", + "display" : "Hypermelanotic macule" + }, + { + "code" : "HP:0011365", + "display" : "Patchy hypopigmentation of hair" + }, + { + "code" : "HP:0001920", + "display" : "Renal artery stenosis" + }, + { + "code" : "HP:0002828", + "display" : "Multiple joint contractures" + }, + { + "code" : "HP:0002144", + "display" : "Tethered cord" + }, + { + "code" : "HP:0010964", + "display" : "Abnormal circulating long-chain fatty-acid concentration" + }, + { + "code" : "HP:0010536", + "display" : "Central sleep apnea" + }, + { + "code" : "HP:0011262", + "display" : "Crimped helix" + }, + { + "code" : "HP:0040079", + "display" : "Irregular dentition" + }, + { + "code" : "HP:0011481", + "display" : "Abnormal lacrimal duct morphology" + }, + { + "code" : "HP:0000220", + "display" : "Velopharyngeal insufficiency" + }, + { + "code" : "HP:0002153", + "display" : "Hyperkalemia" + }, + { + "code" : "HP:0002148", + "display" : "Hypophosphatemia" + }, + { + "code" : "HP:0012621", + "display" : "Persistent cloaca" + }, + { + "code" : "HP:0000867", + "display" : "Secondary hyperparathyroidism" + }, + { + "code" : "HP:0003762", + "display" : "Uterus didelphys" + }, + { + "code" : "HP:0100512", + "display" : "Low levels of vitamin D" + }, + { + "code" : "HP:0012156", + "display" : "Hemophagocytosis" + }, + { + "code" : "HP:0008209", + "display" : "Premature ovarian insufficiency" + }, + { + "code" : "HP:0004349", + "display" : "Reduced bone mineral density" + }, + { + "code" : "HP:0001924", + "display" : "Sideroblastic anemia" + }, + { + "code" : "HP:0011703", + "display" : "Sinus tachycardia" + }, + { + "code" : "HP:0010609", + "display" : "Skin tags" + }, + { + "code" : "HP:0002725", + "display" : "Systemic lupus erythematosus" + }, + { + "code" : "HP:0003193", + "display" : "Allergic rhinitis" + }, + { + "code" : "HP:0006896", + "display" : "Hypnopompic hallucinations" + }, + { + "code" : "HP:0002524", + "display" : "Cataplexy" + }, + { + "code" : "HP:0005227", + "display" : "Adenomatous colonic polyposis" + }, + { + "code" : "HP:0012173", + "display" : "Orthostatic tachycardia" + }, + { + "code" : "HP:0001271", + "display" : "Polyneuropathy" + }, + { + "code" : "HP:0009120", + "display" : "Aplasia/Hypoplasia involving the sinuses" + }, + { + "code" : "HP:0000625", + "display" : "Eyelid coloboma" + }, + { + "code" : "HP:0009754", + "display" : "Fibrous syngnathia" + }, + { + "code" : "HP:0012478", + "display" : "Temporomandibular joint ankylosis" + }, + { + "code" : "HP:0001233", + "display" : "2-3 finger syndactyly" + }, + { + "code" : "HP:0000811", + "display" : "Abnormal external genitalia" + }, + { + "code" : "HP:0005120", + "display" : "Abnormal cardiac atrium morphology" + }, + { + "code" : "HP:0008388", + "display" : "Abnormal toenail morphology" + }, + { + "code" : "HP:0011467", + "display" : "Absent gallbladder" + }, + { + "code" : "HP:0010760", + "display" : "Absent toe" + }, + { + "code" : "HP:0001545", + "display" : "Anteriorly placed anus" + }, + { + "code" : "HP:0001640", + "display" : "Cardiomegaly" + }, + { + "code" : "HP:0002990", + "display" : "Fibular aplasia" + }, + { + "code" : "HP:0004443", + "display" : "Lambdoidal craniosynostosis" + }, + { + "code" : "HP:0008569", + "display" : "Microtia, second degree" + }, + { + "code" : "HP:0006277", + "display" : "Pancreatic hyperplasia" + }, + { + "code" : "HP:0010445", + "display" : "Primum atrial septal defect" + }, + { + "code" : "HP:0011640", + "display" : "Single coronary artery origin" + }, + { + "code" : "HP:0011608", + "display" : "Type II truncus arteriosus" + }, + { + "code" : "HP:0011327", + "display" : "Posterior plagiocephaly" + }, + { + "code" : "HP:0007655", + "display" : "Eversion of lateral third of lower eyelids" + }, + { + "code" : "HP:0010747", + "display" : "Medial flaring of the eyebrow" + }, + { + "code" : "HP:0005957", + "display" : "Breathing dysregulation" + }, + { + "code" : "HP:0000992", + "display" : "Cutaneous photosensitivity" + }, + { + "code" : "HP:0011995", + "display" : "Atrial septal dilatation" + }, + { + "code" : "HP:0000377", + "display" : "Abnormality of the pinna" + }, + { + "code" : "HP:0011266", + "display" : "Microtia, first degree" + }, + { + "code" : "HP:0012650", + "display" : "Perisylvian polymicrogyria" + }, + { + "code" : "HP:0004970", + "display" : "Ascending tubular aorta aneurysm" + }, + { + "code" : "HP:0008348", + "display" : "Decreased circulating IgG2 level" + }, + { + "code" : "HP:0012115", + "display" : "Hepatitis" + }, + { + "code" : "HP:0006979", + "display" : "Sleep-wake cycle disturbance" + }, + { + "code" : "HP:0008587", + "display" : "Mild neurosensory hearing impairment" + }, + { + "code" : "HP:0006097", + "display" : "3-4 finger syndactyly" + }, + { + "code" : "HP:0005263", + "display" : "Gastritis" + }, + { + "code" : "HP:0200043", + "display" : "Verrucae" + }, + { + "code" : "HP:0009600", + "display" : "Flexion contracture of thumb" + }, + { + "code" : "HP:0010818", + "display" : "Generalized tonic seizure" + }, + { + "code" : "HP:0002599", + "display" : "Head titubation" + }, + { + "code" : "HP:0002090", + "display" : "Pneumonia" + }, + { + "code" : "HP:0030423", + "display" : "Splenic cyst" + }, + { + "code" : "HP:0030187", + "display" : "Titubation" + }, + { + "code" : "HP:0002375", + "display" : "Hypokinesia" + }, + { + "code" : "HP:0007166", + "display" : "Paroxysmal dyskinesia" + }, + { + "code" : "HP:0003077", + "display" : "Hyperlipidemia" + }, + { + "code" : "HP:0000017", + "display" : "Nocturia" + }, + { + "code" : "HP:0100555", + "display" : "Asymmetric growth" + }, + { + "code" : "HP:0011847", + "display" : "Giant cell tumor of bone" + }, + { + "code" : "HP:0000112", + "display" : "Nephropathy" + }, + { + "code" : "HP:0000246", + "display" : "Sinusitis" + }, + { + "code" : "HP:0001012", + "display" : "Multiple lipomas" + }, + { + "code" : "HP:0000851", + "display" : "Congenital hypothyroidism" + }, + { + "code" : "HP:0002345", + "display" : "Action tremor" + }, + { + "code" : "HP:0002677", + "display" : "Small foramen magnum" + }, + { + "code" : "HP:0011947", + "display" : "Respiratory tract infection" + }, + { + "code" : "HP:0012151", + "display" : "Hemothorax" + }, + { + "code" : "HP:0005988", + "display" : "Congenital muscular torticollis" + }, + { + "code" : "HP:0002329", + "display" : "Drowsiness" + }, + { + "code" : "HP:0012395", + "display" : "Seasonal allergy" + }, + { + "code" : "HP:0011679", + "display" : "Tetralogy of Fallot with pulmonary stenosis" + }, + { + "code" : "HP:0001864", + "display" : "Clinodactyly of the 5th toe" + }, + { + "code" : "HP:0006934", + "display" : "Congenital nystagmus" + }, + { + "code" : "HP:0100355", + "display" : "Contractures of the distal interphalangeal joint of the 5th toe" + }, + { + "code" : "HP:0007894", + "display" : "Hypopigmentation of the fundus" + }, + { + "code" : "HP:0012377", + "display" : "Hemianopia" + }, + { + "code" : "HP:0002354", + "display" : "Memory impairment" + }, + { + "code" : "HP:0000872", + "display" : "Hashimoto thyroiditis" + }, + { + "code" : "HP:0002519", + "display" : "Hypnagogic hallucinations" + }, + { + "code" : "HP:0010647", + "display" : "Abnormal elasticity of skin" + }, + { + "code" : "HP:0002592", + "display" : "Gastric ulcer" + }, + { + "code" : "HP:0004938", + "display" : "Tortuous cerebral arteries" + }, + { + "code" : "HP:0004948", + "display" : "Vascular tortuosity" + }, + { + "code" : "HP:0002516", + "display" : "Increased intracranial pressure" + }, + { + "code" : "HP:0006460", + "display" : "Increased laxity of ankles" + }, + { + "code" : "HP:0002317", + "display" : "Unsteady gait" + }, + { + "code" : "HP:0000182", + "display" : "Movement abnormality of the tongue" + }, + { + "code" : "HP:0009887", + "display" : "Abnormality of hair pigmentation" + }, + { + "code" : "HP:0005824", + "display" : "Clinodactyly of the 2nd toe" + }, + { + "code" : "HP:0002212", + "display" : "Curly hair" + }, + { + "code" : "HP:0009803", + "display" : "Short phalanx of finger" + }, + { + "code" : "HP:0000572", + "display" : "Visual loss" + }, + { + "code" : "HP:0005216", + "display" : "Impaired mastication" + }, + { + "code" : "HP:0000619", + "display" : "Impaired convergence" + }, + { + "code" : "HP:0002403", + "display" : "Positive Romberg sign" + }, + { + "code" : "HP:0008744", + "display" : "Abnormal aryepiglottic fold morphology" + }, + { + "code" : "HP:0002374", + "display" : "Diminished movement" + }, + { + "code" : "HP:0008277", + "display" : "Abnormal blood zinc concentration" + }, + { + "code" : "HP:0012781", + "display" : "Mid-frequency hearing loss" + }, + { + "code" : "HP:0100758", + "display" : "Gangrene" + }, + { + "code" : "HP:0003256", + "display" : "Abnormality of the coagulation cascade" + }, + { + "code" : "HP:0004387", + "display" : "Enterocolitis" + }, + { + "code" : "HP:0011029", + "display" : "Internal hemorrhage" + }, + { + "code" : "HP:0011649", + "display" : "Patent ductus arteriosus after premature birth" + }, + { + "code" : "HP:0012050", + "display" : "Anasarca" + }, + { + "code" : "HP:0001683", + "display" : "Ectopia cordis" + }, + { + "code" : "HP:0011682", + "display" : "Perimembranous ventricular septal defect" + }, + { + "code" : "HP:0010624", + "display" : "Aplastic/hypoplastic toenail" + }, + { + "code" : "HP:0002705", + "display" : "High, narrow palate" + }, + { + "code" : "HP:0011340", + "display" : "Incomplete cleft of the upper lip" + }, + { + "code" : "HP:0011613", + "display" : "Interrupted aortic arch type B" + }, + { + "code" : "HP:0006167", + "display" : "Prominent proximal interphalangeal joints" + }, + { + "code" : "HP:0002918", + "display" : "Hypermagnesemia" + }, + { + "code" : "HP:0011937", + "display" : "Hypoplastic fifth toenail" + }, + { + "code" : "HP:0001067", + "display" : "Neurofibromas" + }, + { + "code" : "HP:0011403", + "display" : "Abnormal umbilical cord blood vessels" + }, + { + "code" : "HP:0003316", + "display" : "Butterfly vertebrae" + }, + { + "code" : "HP:0002247", + "display" : "Duodenal atresia" + }, + { + "code" : "HP:0008439", + "display" : "Lumbar hemivertebrae" + }, + { + "code" : "HP:0011599", + "display" : "Mesocardia" + }, + { + "code" : "HP:0008467", + "display" : "Thoracic hemivertebrae" + }, + { + "code" : "HP:0004626", + "display" : "Lumbar scoliosis" + }, + { + "code" : "HP:0006808", + "display" : "Cerebral hypomyelination" + }, + { + "code" : "HP:0002926", + "display" : "Abnormality of thyroid physiology" + }, + { + "code" : "HP:0007970", + "display" : "Congenital ptosis" + }] } \ No newline at end of file diff --git a/CodeSystem-hpo.json.html b/CodeSystem-hpo.json.html index 756b5e60..77ff08b3 100644 --- a/CodeSystem-hpo.json.html +++ b/CodeSystem-hpo.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Human Phenotype Ontology - JSON Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: Human Phenotype Ontology - JSON Representation</h2> "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a>" : "Human Phenotype Ontology", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a>" : "draft", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">experimental</a>" : false, - "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>" : [ { @@ -7925,7 +7925,7 @@ <h2 id="root">: Human Phenotype Ontology - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-hpo.ttl b/CodeSystem-hpo.ttl index 7b6ca728..63f90370 100644 --- a/CodeSystem-hpo.ttl +++ b/CodeSystem-hpo.ttl @@ -7,19 +7,19 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/hpo> a fhir:CodeSystem; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "hpo"]; + fhir:Resource.id [ fhir:value "hpo"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Properties</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Type</b></td><td><b>Description</b></td></tr><tr><td>parent</td><td>code</td><td>Parent codes.</td></tr><tr><td>imported</td><td>boolean</td><td>Indicates if the concept is imported from another code system.</td></tr><tr><td>root</td><td>boolean</td><td>Indicates if this concept is a root concept (i.e. Thing is equivalent or a direct parent)</td></tr><tr><td>deprecated</td><td>boolean</td><td>Indicates if this concept is deprecated.</td></tr></table><p><b>Filters</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Description</b></td><td><b>operator</b></td><td><b>Value</b></td></tr><tr><td>root</td><td/><td>= </td><td>True or false.</td></tr><tr><td>deprecated</td><td/><td>= </td><td>True or false.</td></tr><tr><td>imported</td><td/><td>= </td><td>True or false</td></tr></table><p>This code system <code>http://purl.obolibrary.org/obo/hp.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">HP:0000365<a name=\"hpo-HP.580000365\"> </a></td><td>Hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002564<a name=\"hpo-HP.580002564\"> </a></td><td>obsolete Malformation of the heart and great vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0001028<a name=\"hpo-HP.580001028\"> </a></td><td>Hemangioma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000476<a name=\"hpo-HP.580000476\"> </a></td><td>Cystic hygroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000568<a name=\"hpo-HP.580000568\"> </a></td><td>Microphthalmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000518<a name=\"hpo-HP.580000518\"> </a></td><td>Cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000612<a name=\"hpo-HP.580000612\"> </a></td><td>Iris coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000567<a name=\"hpo-HP.580000567\"> </a></td><td>Chorioretinal coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000316<a name=\"hpo-HP.580000316\"> </a></td><td>Hypertelorism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000482<a name=\"hpo-HP.580000482\"> </a></td><td>Microcornea</td></tr><tr><td style=\"white-space:nowrap\">HP:0000588<a name=\"hpo-HP.580000588\"> </a></td><td>Optic nerve coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0004426<a name=\"hpo-HP.580004426\"> </a></td><td>Abnormality of the cheek</td></tr><tr><td style=\"white-space:nowrap\">HP:0009125<a name=\"hpo-HP.580009125\"> </a></td><td>Lipodystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002023<a name=\"hpo-HP.580002023\"> </a></td><td>Anal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003468<a name=\"hpo-HP.580003468\"> </a></td><td>Abnormal vertebral morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000545<a name=\"hpo-HP.580000545\"> </a></td><td>Myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000122<a name=\"hpo-HP.580000122\"> </a></td><td>Unilateral renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002143<a name=\"hpo-HP.580002143\"> </a></td><td>Abnormality of the spinal cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0003508<a name=\"hpo-HP.580003508\"> </a></td><td>Proportionate short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0000271<a name=\"hpo-HP.580000271\"> </a></td><td>Abnormality of the face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000637<a name=\"hpo-HP.580000637\"> </a></td><td>Long palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000492<a name=\"hpo-HP.580000492\"> </a></td><td>Abnormal eyelid morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000389<a name=\"hpo-HP.580000389\"> </a></td><td>Chronic otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0000400<a name=\"hpo-HP.580000400\"> </a></td><td>Macrotia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000405<a name=\"hpo-HP.580000405\"> </a></td><td>Conductive hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0012712<a name=\"hpo-HP.580012712\"> </a></td><td>Mild hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0005280<a name=\"hpo-HP.580005280\"> </a></td><td>Depressed nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000431<a name=\"hpo-HP.580000431\"> </a></td><td>Wide nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000319<a name=\"hpo-HP.580000319\"> </a></td><td>Smooth philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000175<a name=\"hpo-HP.580000175\"> </a></td><td>Cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001611<a name=\"hpo-HP.580001611\"> </a></td><td>Nasal speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0002099<a name=\"hpo-HP.580002099\"> </a></td><td>Asthma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001397<a name=\"hpo-HP.580001397\"> </a></td><td>Hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001081<a name=\"hpo-HP.580001081\"> </a></td><td>Cholelithiasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002650<a name=\"hpo-HP.580002650\"> </a></td><td>Scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001212<a name=\"hpo-HP.580001212\"> </a></td><td>Prominent fingertip pads</td></tr><tr><td style=\"white-space:nowrap\">HP:0001328<a name=\"hpo-HP.580001328\"> </a></td><td>Specific learning disability</td></tr><tr><td style=\"white-space:nowrap\">HP:0000824<a name=\"hpo-HP.580000824\"> </a></td><td>Growth hormone deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002607<a name=\"hpo-HP.580002607\"> </a></td><td>Bowel incontinence</td></tr><tr><td style=\"white-space:nowrap\">HP:0100731<a name=\"hpo-HP.580100731\"> </a></td><td>Transverse facial cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0000528<a name=\"hpo-HP.580000528\"> </a></td><td>Anophthalmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000601<a name=\"hpo-HP.580000601\"> </a></td><td>Hypotelorism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000369<a name=\"hpo-HP.580000369\"> </a></td><td>Low-set ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001274<a name=\"hpo-HP.580001274\"> </a></td><td>Agenesis of corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002084<a name=\"hpo-HP.580002084\"> </a></td><td>Encephalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0007033<a name=\"hpo-HP.580007033\"> </a></td><td>Cerebellar dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100336<a name=\"hpo-HP.580100336\"> </a></td><td>Bilateral cleft lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0100337<a name=\"hpo-HP.580100337\"> </a></td><td>Bilateral cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001511<a name=\"hpo-HP.580001511\"> </a></td><td>Intrauterine growth retardation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011451<a name=\"hpo-HP.580011451\"> </a></td><td>Congenital microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000324<a name=\"hpo-HP.580000324\"> </a></td><td>Facial asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0000581<a name=\"hpo-HP.580000581\"> </a></td><td>Blepharophimosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000508<a name=\"hpo-HP.580000508\"> </a></td><td>Ptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008551<a name=\"hpo-HP.580008551\"> </a></td><td>Microtia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001631<a name=\"hpo-HP.580001631\"> </a></td><td>Atrial septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0000085<a name=\"hpo-HP.580000085\"> </a></td><td>Horseshoe kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0011927<a name=\"hpo-HP.580011927\"> </a></td><td>Short digit</td></tr><tr><td style=\"white-space:nowrap\">HP:0001156<a name=\"hpo-HP.580001156\"> </a></td><td>Brachydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002066<a name=\"hpo-HP.580002066\"> </a></td><td>Gait ataxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001250<a name=\"hpo-HP.580001250\"> </a></td><td>Seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001263<a name=\"hpo-HP.580001263\"> </a></td><td>Global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0001562<a name=\"hpo-HP.580001562\"> </a></td><td>Oligohydramnios</td></tr><tr><td style=\"white-space:nowrap\">HP:0001195<a name=\"hpo-HP.580001195\"> </a></td><td>Single umbilical artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0006349<a name=\"hpo-HP.580006349\"> </a></td><td>Agenesis of permanent teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000668<a name=\"hpo-HP.580000668\"> </a></td><td>Hypodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000677<a name=\"hpo-HP.580000677\"> </a></td><td>Oligodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001252<a name=\"hpo-HP.580001252\"> </a></td><td>Muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003429<a name=\"hpo-HP.580003429\"> </a></td><td>CNS hypomyelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0010864<a name=\"hpo-HP.580010864\"> </a></td><td>Intellectual disability, severe</td></tr><tr><td style=\"white-space:nowrap\">HP:0004325<a name=\"hpo-HP.580004325\"> </a></td><td>Decreased body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000666<a name=\"hpo-HP.580000666\"> </a></td><td>Horizontal nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000218<a name=\"hpo-HP.580000218\"> </a></td><td>High palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0010809<a name=\"hpo-HP.580010809\"> </a></td><td>Broad uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000767<a name=\"hpo-HP.580000767\"> </a></td><td>Pectus excavatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0003691<a name=\"hpo-HP.580003691\"> </a></td><td>Scapular winging</td></tr><tr><td style=\"white-space:nowrap\">HP:0002616<a name=\"hpo-HP.580002616\"> </a></td><td>Aortic root aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0001601<a name=\"hpo-HP.580001601\"> </a></td><td>Laryngomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002021<a name=\"hpo-HP.580002021\"> </a></td><td>Pyloric stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001388<a name=\"hpo-HP.580001388\"> </a></td><td>Joint laxity</td></tr><tr><td style=\"white-space:nowrap\">HP:0001187<a name=\"hpo-HP.580001187\"> </a></td><td>Hyperextensibility of the finger joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0000741<a name=\"hpo-HP.580000741\"> </a></td><td>Apathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000817<a name=\"hpo-HP.580000817\"> </a></td><td>Poor eye contact</td></tr><tr><td style=\"white-space:nowrap\">HP:0000821<a name=\"hpo-HP.580000821\"> </a></td><td>Hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000002<a name=\"hpo-HP.580000002\"> </a></td><td>Abnormality of body height</td></tr><tr><td style=\"white-space:nowrap\">HP:0000079<a name=\"hpo-HP.580000079\"> </a></td><td>Abnormality of the urinary system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000164<a name=\"hpo-HP.580000164\"> </a></td><td>Abnormality of the dentition</td></tr><tr><td style=\"white-space:nowrap\">HP:0000364<a name=\"hpo-HP.580000364\"> </a></td><td>Hearing abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000366<a name=\"hpo-HP.580000366\"> </a></td><td>Abnormality of the nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0000464<a name=\"hpo-HP.580000464\"> </a></td><td>Abnormality of the neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000707<a name=\"hpo-HP.580000707\"> </a></td><td>Abnormality of the nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000708<a name=\"hpo-HP.580000708\"> </a></td><td>Behavioral abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000769<a name=\"hpo-HP.580000769\"> </a></td><td>Abnormality of the breast</td></tr><tr><td style=\"white-space:nowrap\">HP:0000772<a name=\"hpo-HP.580000772\"> </a></td><td>Abnormality of the ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000775<a name=\"hpo-HP.580000775\"> </a></td><td>Abnormality of the diaphragm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000889<a name=\"hpo-HP.580000889\"> </a></td><td>Abnormality of the clavicle</td></tr><tr><td style=\"white-space:nowrap\">HP:0000925<a name=\"hpo-HP.580000925\"> </a></td><td>Abnormality of the vertebral column</td></tr><tr><td style=\"white-space:nowrap\">HP:0001080<a name=\"hpo-HP.580001080\"> </a></td><td>Biliary tract abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001392<a name=\"hpo-HP.580001392\"> </a></td><td>Abnormality of the liver</td></tr><tr><td style=\"white-space:nowrap\">HP:0001438<a name=\"hpo-HP.580001438\"> </a></td><td>Abnormal abdomen morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001608<a name=\"hpo-HP.580001608\"> </a></td><td>Abnormality of the voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001627<a name=\"hpo-HP.580001627\"> </a></td><td>Abnormal heart morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001732<a name=\"hpo-HP.580001732\"> </a></td><td>Abnormality of the pancreas</td></tr><tr><td style=\"white-space:nowrap\">HP:0001739<a name=\"hpo-HP.580001739\"> </a></td><td>Abnormality of the nasopharynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0001743<a name=\"hpo-HP.580001743\"> </a></td><td>Abnormality of the spleen</td></tr><tr><td style=\"white-space:nowrap\">HP:0001760<a name=\"hpo-HP.580001760\"> </a></td><td>Abnormal foot morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001871<a name=\"hpo-HP.580001871\"> </a></td><td>Abnormality of blood and blood-forming tissues</td></tr><tr><td style=\"white-space:nowrap\">HP:0002031<a name=\"hpo-HP.580002031\"> </a></td><td>Abnormal esophagus morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002244<a name=\"hpo-HP.580002244\"> </a></td><td>Abnormality of the small intestine</td></tr><tr><td style=\"white-space:nowrap\">HP:0002246<a name=\"hpo-HP.580002246\"> </a></td><td>Abnormality of the duodenum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002250<a name=\"hpo-HP.580002250\"> </a></td><td>Abnormal large intestine morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002644<a name=\"hpo-HP.580002644\"> </a></td><td>Abnormality of pelvic girdle bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002664<a name=\"hpo-HP.580002664\"> </a></td><td>Neoplasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0002715<a name=\"hpo-HP.580002715\"> </a></td><td>Abnormality of the immune system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002814<a name=\"hpo-HP.580002814\"> </a></td><td>Abnormality of the lower limb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002817<a name=\"hpo-HP.580002817\"> </a></td><td>Abnormality of the upper limb</td></tr><tr><td style=\"white-space:nowrap\">HP:0005483<a name=\"hpo-HP.580005483\"> </a></td><td>Abnormal epiglottis morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008777<a name=\"hpo-HP.580008777\"> </a></td><td>Abnormal vocal cord morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011844<a name=\"hpo-HP.580011844\"> </a></td><td>Abnormal appendicular skeleton morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012732<a name=\"hpo-HP.580012732\"> </a></td><td>Anorectal anomaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001508<a name=\"hpo-HP.580001508\"> </a></td><td>Failure to thrive</td></tr><tr><td style=\"white-space:nowrap\">HP:0002902<a name=\"hpo-HP.580002902\"> </a></td><td>Hyponatremia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012236<a name=\"hpo-HP.580012236\"> </a></td><td>Elevated sweat chloride</td></tr><tr><td style=\"white-space:nowrap\">HP:0000347<a name=\"hpo-HP.580000347\"> </a></td><td>Micrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000926<a name=\"hpo-HP.580000926\"> </a></td><td>Platyspondyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001371<a name=\"hpo-HP.580001371\"> </a></td><td>Flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0001875<a name=\"hpo-HP.580001875\"> </a></td><td>Neutropenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001888<a name=\"hpo-HP.580001888\"> </a></td><td>Lymphopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002857<a name=\"hpo-HP.580002857\"> </a></td><td>Genu valgum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002986<a name=\"hpo-HP.580002986\"> </a></td><td>Radial bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003015<a name=\"hpo-HP.580003015\"> </a></td><td>Flared metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003025<a name=\"hpo-HP.580003025\"> </a></td><td>Metaphyseal irregularity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003097<a name=\"hpo-HP.580003097\"> </a></td><td>Short femur</td></tr><tr><td style=\"white-space:nowrap\">HP:0003300<a name=\"hpo-HP.580003300\"> </a></td><td>Ovoid vertebral bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0003307<a name=\"hpo-HP.580003307\"> </a></td><td>Hyperlordosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004209<a name=\"hpo-HP.580004209\"> </a></td><td>Clinodactyly of the 5th finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0004322<a name=\"hpo-HP.580004322\"> </a></td><td>Short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0005792<a name=\"hpo-HP.580005792\"> </a></td><td>Short humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0006248<a name=\"hpo-HP.580006248\"> </a></td><td>Limited wrist movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0000944<a name=\"hpo-HP.580000944\"> </a></td><td>Abnormality of the metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011921<a name=\"hpo-HP.580011921\"> </a></td><td>Exudative pleural effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0003043<a name=\"hpo-HP.580003043\"> </a></td><td>Abnormality of the shoulder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000290<a name=\"hpo-HP.580000290\"> </a></td><td>Abnormality of the forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0005288<a name=\"hpo-HP.580005288\"> </a></td><td>Abnormality of the nares</td></tr><tr><td style=\"white-space:nowrap\">HP:0000234<a name=\"hpo-HP.580000234\"> </a></td><td>Abnormality of the head</td></tr><tr><td style=\"white-space:nowrap\">HP:0004323<a name=\"hpo-HP.580004323\"> </a></td><td>Abnormality of body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000483<a name=\"hpo-HP.580000483\"> </a></td><td>Astigmatism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011003<a name=\"hpo-HP.580011003\"> </a></td><td>High myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000470<a name=\"hpo-HP.580000470\"> </a></td><td>Short neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0030044<a name=\"hpo-HP.580030044\"> </a></td><td>Flexion contracture of digit</td></tr><tr><td style=\"white-space:nowrap\">HP:0100871<a name=\"hpo-HP.580100871\"> </a></td><td>Abnormality of the palm</td></tr><tr><td style=\"white-space:nowrap\">HP:0004334<a name=\"hpo-HP.580004334\"> </a></td><td>Dermal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001845<a name=\"hpo-HP.580001845\"> </a></td><td>Overlapping toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000496<a name=\"hpo-HP.580000496\"> </a></td><td>Abnormality of eye movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0001780<a name=\"hpo-HP.580001780\"> </a></td><td>Abnormality of toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001626<a name=\"hpo-HP.580001626\"> </a></td><td>Abnormality of the cardiovascular system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002086<a name=\"hpo-HP.580002086\"> </a></td><td>Abnormality of the respiratory system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000818<a name=\"hpo-HP.580000818\"> </a></td><td>Abnormality of the endocrine system</td></tr><tr><td style=\"white-space:nowrap\">HP:0012372<a name=\"hpo-HP.580012372\"> </a></td><td>Abnormal eye morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009473<a name=\"hpo-HP.580009473\"> </a></td><td>Joint contracture of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0003199<a name=\"hpo-HP.580003199\"> </a></td><td>Decreased muscle mass</td></tr><tr><td style=\"white-space:nowrap\">HP:0003202<a name=\"hpo-HP.580003202\"> </a></td><td>Skeletal muscle atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003551<a name=\"hpo-HP.580003551\"> </a></td><td>Difficulty climbing stairs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002355<a name=\"hpo-HP.580002355\"> </a></td><td>Difficulty walking</td></tr><tr><td style=\"white-space:nowrap\">HP:0003546<a name=\"hpo-HP.580003546\"> </a></td><td>Exercise intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0003325<a name=\"hpo-HP.580003325\"> </a></td><td>Limb-girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003701<a name=\"hpo-HP.580003701\"> </a></td><td>Proximal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003547<a name=\"hpo-HP.580003547\"> </a></td><td>Shoulder girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0007340<a name=\"hpo-HP.580007340\"> </a></td><td>Lower limb muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002168<a name=\"hpo-HP.580002168\"> </a></td><td>Scanning speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0001265<a name=\"hpo-HP.580001265\"> </a></td><td>Hyporeflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001284<a name=\"hpo-HP.580001284\"> </a></td><td>Areflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003477<a name=\"hpo-HP.580003477\"> </a></td><td>Peripheral axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000924<a name=\"hpo-HP.580000924\"> </a></td><td>Abnormality of the skeletal system</td></tr><tr><td style=\"white-space:nowrap\">HP:0001291<a name=\"hpo-HP.580001291\"> </a></td><td>Abnormal cranial nerve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003687<a name=\"hpo-HP.580003687\"> </a></td><td>Centrally nucleated skeletal muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0001324<a name=\"hpo-HP.580001324\"> </a></td><td>Muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002515<a name=\"hpo-HP.580002515\"> </a></td><td>Waddling gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0100280<a name=\"hpo-HP.580100280\"> </a></td><td>Crohn's disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0002631<a name=\"hpo-HP.580002631\"> </a></td><td>obsolete Dilatation of ascending aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0100026<a name=\"hpo-HP.580100026\"> </a></td><td>Arteriovenous malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002637<a name=\"hpo-HP.580002637\"> </a></td><td>Cerebral ischemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002619<a name=\"hpo-HP.580002619\"> </a></td><td>Varicose veins</td></tr><tr><td style=\"white-space:nowrap\">HP:0001159<a name=\"hpo-HP.580001159\"> </a></td><td>Syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002069<a name=\"hpo-HP.580002069\"> </a></td><td>Bilateral tonic-clonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000977<a name=\"hpo-HP.580000977\"> </a></td><td>Soft skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010648<a name=\"hpo-HP.580010648\"> </a></td><td>Dermal translucency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000978<a name=\"hpo-HP.580000978\"> </a></td><td>Bruising susceptibility</td></tr><tr><td style=\"white-space:nowrap\">HP:0001956<a name=\"hpo-HP.580001956\"> </a></td><td>Truncal obesity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000189<a name=\"hpo-HP.580000189\"> </a></td><td>Narrow palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000678<a name=\"hpo-HP.580000678\"> </a></td><td>Dental crowding</td></tr><tr><td style=\"white-space:nowrap\">HP:0002870<a name=\"hpo-HP.580002870\"> </a></td><td>Obstructive sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001763<a name=\"hpo-HP.580001763\"> </a></td><td>Pes planus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000782<a name=\"hpo-HP.580000782\"> </a></td><td>Abnormality of the scapula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001600<a name=\"hpo-HP.580001600\"> </a></td><td>Abnormality of the larynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0002088<a name=\"hpo-HP.580002088\"> </a></td><td>Abnormal lung morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011407<a name=\"hpo-HP.580011407\"> </a></td><td>Proportionate tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0000541<a name=\"hpo-HP.580000541\"> </a></td><td>Retinal detachment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001373<a name=\"hpo-HP.580001373\"> </a></td><td>Joint dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000938<a name=\"hpo-HP.580000938\"> </a></td><td>Osteopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002942<a name=\"hpo-HP.580002942\"> </a></td><td>Thoracic kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001840<a name=\"hpo-HP.580001840\"> </a></td><td>Metatarsus adductus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001844<a name=\"hpo-HP.580001844\"> </a></td><td>Abnormality of the hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0001765<a name=\"hpo-HP.580001765\"> </a></td><td>Hammertoe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000606<a name=\"hpo-HP.580000606\"> </a></td><td>Abnormality of the periorbital region</td></tr><tr><td style=\"white-space:nowrap\">HP:0002757<a name=\"hpo-HP.580002757\"> </a></td><td>Recurrent fractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0000647<a name=\"hpo-HP.580000647\"> </a></td><td>Sclerocornea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001166<a name=\"hpo-HP.580001166\"> </a></td><td>Arachnodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005490<a name=\"hpo-HP.580005490\"> </a></td><td>Postnatal macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0011363<a name=\"hpo-HP.580011363\"> </a></td><td>Abnormality of hair growth rate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000276<a name=\"hpo-HP.580000276\"> </a></td><td>Long face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000275<a name=\"hpo-HP.580000275\"> </a></td><td>Narrow face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000337<a name=\"hpo-HP.580000337\"> </a></td><td>Broad forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0002267<a name=\"hpo-HP.580002267\"> </a></td><td>Exaggerated startle response</td></tr><tr><td style=\"white-space:nowrap\">HP:0002187<a name=\"hpo-HP.580002187\"> </a></td><td>Intellectual disability, profound</td></tr><tr><td style=\"white-space:nowrap\">HP:0000728<a name=\"hpo-HP.580000728\"> </a></td><td>Impaired ability to form peer relationships</td></tr><tr><td style=\"white-space:nowrap\">HP:0000733<a name=\"hpo-HP.580000733\"> </a></td><td>Stereotypy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000739<a name=\"hpo-HP.580000739\"> </a></td><td>Anxiety</td></tr><tr><td style=\"white-space:nowrap\">HP:0000929<a name=\"hpo-HP.580000929\"> </a></td><td>Abnormal skull morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001965<a name=\"hpo-HP.580001965\"> </a></td><td>Abnormal scalp morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100538<a name=\"hpo-HP.580100538\"> </a></td><td>Abnormality of the supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0000309<a name=\"hpo-HP.580000309\"> </a></td><td>Abnormality of the midface</td></tr><tr><td style=\"white-space:nowrap\">HP:0000277<a name=\"hpo-HP.580000277\"> </a></td><td>Abnormality of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000765<a name=\"hpo-HP.580000765\"> </a></td><td>Abnormality of the thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0100008<a name=\"hpo-HP.580100008\"> </a></td><td>Schwannoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0030038<a name=\"hpo-HP.580030038\"> </a></td><td>Enchondroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0100777<a name=\"hpo-HP.580100777\"> </a></td><td>Exostoses</td></tr><tr><td style=\"white-space:nowrap\">HP:0011663<a name=\"hpo-HP.580011663\"> </a></td><td>Right ventricular cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011675<a name=\"hpo-HP.580011675\"> </a></td><td>Arrhythmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001962<a name=\"hpo-HP.580001962\"> </a></td><td>Palpitations</td></tr><tr><td style=\"white-space:nowrap\">HP:0001279<a name=\"hpo-HP.580001279\"> </a></td><td>Syncope</td></tr><tr><td style=\"white-space:nowrap\">HP:0004756<a name=\"hpo-HP.580004756\"> </a></td><td>Ventricular tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000252<a name=\"hpo-HP.580000252\"> </a></td><td>Microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000303<a name=\"hpo-HP.580000303\"> </a></td><td>Mandibular prognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000664<a name=\"hpo-HP.580000664\"> </a></td><td>Synophrys</td></tr><tr><td style=\"white-space:nowrap\">HP:0001609<a name=\"hpo-HP.580001609\"> </a></td><td>Hoarse voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0002558<a name=\"hpo-HP.580002558\"> </a></td><td>Supernumerary nipple</td></tr><tr><td style=\"white-space:nowrap\">HP:0001634<a name=\"hpo-HP.580001634\"> </a></td><td>Mitral valve prolapse</td></tr><tr><td style=\"white-space:nowrap\">HP:0000028<a name=\"hpo-HP.580000028\"> </a></td><td>Cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000973<a name=\"hpo-HP.580000973\"> </a></td><td>Cutis laxa</td></tr><tr><td style=\"white-space:nowrap\">HP:0001518<a name=\"hpo-HP.580001518\"> </a></td><td>Small for gestational age</td></tr><tr><td style=\"white-space:nowrap\">HP:0000527<a name=\"hpo-HP.580000527\"> </a></td><td>Long eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002808<a name=\"hpo-HP.580002808\"> </a></td><td>Kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000248<a name=\"hpo-HP.580000248\"> </a></td><td>Brachycephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000505<a name=\"hpo-HP.580000505\"> </a></td><td>Visual impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000512<a name=\"hpo-HP.580000512\"> </a></td><td>Abnormal electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:0000517<a name=\"hpo-HP.580000517\"> </a></td><td>Abnormality of the lens</td></tr><tr><td style=\"white-space:nowrap\">HP:0000529<a name=\"hpo-HP.580000529\"> </a></td><td>Progressive visual loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0000586<a name=\"hpo-HP.580000586\"> </a></td><td>Shallow orbits</td></tr><tr><td style=\"white-space:nowrap\">HP:0000603<a name=\"hpo-HP.580000603\"> </a></td><td>Central scotoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000939<a name=\"hpo-HP.580000939\"> </a></td><td>Osteoporosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001377<a name=\"hpo-HP.580001377\"> </a></td><td>Limited elbow extension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001387<a name=\"hpo-HP.580001387\"> </a></td><td>Joint stiffness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001822<a name=\"hpo-HP.580001822\"> </a></td><td>Hallux valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0002657<a name=\"hpo-HP.580002657\"> </a></td><td>Spondylometaphyseal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003026<a name=\"hpo-HP.580003026\"> </a></td><td>Short long bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0006462<a name=\"hpo-HP.580006462\"> </a></td><td>Generalized bone demineralization</td></tr><tr><td style=\"white-space:nowrap\">HP:0008873<a name=\"hpo-HP.580008873\"> </a></td><td>Disproportionate short-limb short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0008905<a name=\"hpo-HP.580008905\"> </a></td><td>Rhizomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008922<a name=\"hpo-HP.580008922\"> </a></td><td>Childhood-onset short-trunk short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0200020<a name=\"hpo-HP.580200020\"> </a></td><td>Corneal erosion</td></tr><tr><td style=\"white-space:nowrap\">HP:0001172<a name=\"hpo-HP.580001172\"> </a></td><td>Abnormal thumb morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002286<a name=\"hpo-HP.580002286\"> </a></td><td>Fair hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0010719<a name=\"hpo-HP.580010719\"> </a></td><td>Abnormality of hair texture</td></tr><tr><td style=\"white-space:nowrap\">HP:0010720<a name=\"hpo-HP.580010720\"> </a></td><td>Abnormal hair pattern</td></tr><tr><td style=\"white-space:nowrap\">HP:0001635<a name=\"hpo-HP.580001635\"> </a></td><td>Congestive heart failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001644<a name=\"hpo-HP.580001644\"> </a></td><td>Dilated cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001663<a name=\"hpo-HP.580001663\"> </a></td><td>Ventricular fibrillation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011712<a name=\"hpo-HP.580011712\"> </a></td><td>Right bundle branch block</td></tr><tr><td style=\"white-space:nowrap\">HP:0000272<a name=\"hpo-HP.580000272\"> </a></td><td>Malar flattening</td></tr><tr><td style=\"white-space:nowrap\">HP:0000286<a name=\"hpo-HP.580000286\"> </a></td><td>Epicanthus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000322<a name=\"hpo-HP.580000322\"> </a></td><td>Short philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000463<a name=\"hpo-HP.580000463\"> </a></td><td>Anteverted nares</td></tr><tr><td style=\"white-space:nowrap\">HP:0000494<a name=\"hpo-HP.580000494\"> </a></td><td>Downslanted palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0000543<a name=\"hpo-HP.580000543\"> </a></td><td>Optic disc pallor</td></tr><tr><td style=\"white-space:nowrap\">HP:0000699<a name=\"hpo-HP.580000699\"> </a></td><td>Diastema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000773<a name=\"hpo-HP.580000773\"> </a></td><td>Short ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000887<a name=\"hpo-HP.580000887\"> </a></td><td>Cupped ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000946<a name=\"hpo-HP.580000946\"> </a></td><td>Hypoplastic ilia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000954<a name=\"hpo-HP.580000954\"> </a></td><td>Single transverse palmar crease</td></tr><tr><td style=\"white-space:nowrap\">HP:0001182<a name=\"hpo-HP.580001182\"> </a></td><td>Tapered finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0001537<a name=\"hpo-HP.580001537\"> </a></td><td>Umbilical hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002007<a name=\"hpo-HP.580002007\"> </a></td><td>Frontal bossing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002980<a name=\"hpo-HP.580002980\"> </a></td><td>Femoral bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002982<a name=\"hpo-HP.580002982\"> </a></td><td>Tibial bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003021<a name=\"hpo-HP.580003021\"> </a></td><td>Metaphyseal cupping</td></tr><tr><td style=\"white-space:nowrap\">HP:0005011<a name=\"hpo-HP.580005011\"> </a></td><td>Mesomelic arm shortening</td></tr><tr><td style=\"white-space:nowrap\">HP:0008803<a name=\"hpo-HP.580008803\"> </a></td><td>obsolete Narrow sacroiliac notch</td></tr><tr><td style=\"white-space:nowrap\">HP:0009117<a name=\"hpo-HP.580009117\"> </a></td><td>Aplasia/Hypoplasia of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0011220<a name=\"hpo-HP.580011220\"> </a></td><td>Prominent forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0012801<a name=\"hpo-HP.580012801\"> </a></td><td>Narrow jaw</td></tr><tr><td style=\"white-space:nowrap\">HP:0000243<a name=\"hpo-HP.580000243\"> </a></td><td>Trigonocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000358<a name=\"hpo-HP.580000358\"> </a></td><td>Posteriorly rotated ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0000411<a name=\"hpo-HP.580000411\"> </a></td><td>Protruding ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000646<a name=\"hpo-HP.580000646\"> </a></td><td>Amblyopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002812<a name=\"hpo-HP.580002812\"> </a></td><td>Coxa vara</td></tr><tr><td style=\"white-space:nowrap\">HP:0002970<a name=\"hpo-HP.580002970\"> </a></td><td>Genu varum</td></tr><tr><td style=\"white-space:nowrap\">HP:0012775<a name=\"hpo-HP.580012775\"> </a></td><td>Stellate iris</td></tr><tr><td style=\"white-space:nowrap\">HP:0000278<a name=\"hpo-HP.580000278\"> </a></td><td>Retrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0009796<a name=\"hpo-HP.580009796\"> </a></td><td>Branchial cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0002474<a name=\"hpo-HP.580002474\"> </a></td><td>Expressive language delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0007018<a name=\"hpo-HP.580007018\"> </a></td><td>Attention deficit hyperactivity disorder</td></tr><tr><td style=\"white-space:nowrap\">HP:0003198<a name=\"hpo-HP.580003198\"> </a></td><td>Myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003324<a name=\"hpo-HP.580003324\"> </a></td><td>Generalized muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003552<a name=\"hpo-HP.580003552\"> </a></td><td>Muscle stiffness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003554<a name=\"hpo-HP.580003554\"> </a></td><td>Type 2 muscle fiber atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003557<a name=\"hpo-HP.580003557\"> </a></td><td>Increased variability in muscle fiber diameter</td></tr><tr><td style=\"white-space:nowrap\">HP:0009025<a name=\"hpo-HP.580009025\"> </a></td><td>Increased connective tissue</td></tr><tr><td style=\"white-space:nowrap\">HP:0003635<a name=\"hpo-HP.580003635\"> </a></td><td>Loss of subcutaneous adipose tissue in limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002597<a name=\"hpo-HP.580002597\"> </a></td><td>Abnormality of the vasculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0001649<a name=\"hpo-HP.580001649\"> </a></td><td>Tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001638<a name=\"hpo-HP.580001638\"> </a></td><td>Cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001654<a name=\"hpo-HP.580001654\"> </a></td><td>Abnormal heart valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001671<a name=\"hpo-HP.580001671\"> </a></td><td>Abnormal cardiac septum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000103<a name=\"hpo-HP.580000103\"> </a></td><td>Polyuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0000114<a name=\"hpo-HP.580000114\"> </a></td><td>Proximal tubulopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001878<a name=\"hpo-HP.580001878\"> </a></td><td>Hemolytic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001931<a name=\"hpo-HP.580001931\"> </a></td><td>Hypochromic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001935<a name=\"hpo-HP.580001935\"> </a></td><td>Microcytic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001959<a name=\"hpo-HP.580001959\"> </a></td><td>Polydipsia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001994<a name=\"hpo-HP.580001994\"> </a></td><td>Renal Fanconi syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002134<a name=\"hpo-HP.580002134\"> </a></td><td>Abnormality of the basal ganglia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002188<a name=\"hpo-HP.580002188\"> </a></td><td>Delayed CNS myelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0002908<a name=\"hpo-HP.580002908\"> </a></td><td>Conjugated hyperbilirubinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003774<a name=\"hpo-HP.580003774\"> </a></td><td>Stage 5 chronic kidney disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0010700<a name=\"hpo-HP.580010700\"> </a></td><td>obsolete Total cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000193<a name=\"hpo-HP.580000193\"> </a></td><td>Bifid uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000219<a name=\"hpo-HP.580000219\"> </a></td><td>Thin upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000426<a name=\"hpo-HP.580000426\"> </a></td><td>Prominent nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000452<a name=\"hpo-HP.580000452\"> </a></td><td>Choanal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000490<a name=\"hpo-HP.580000490\"> </a></td><td>Deeply set eye</td></tr><tr><td style=\"white-space:nowrap\">HP:0000540<a name=\"hpo-HP.580000540\"> </a></td><td>Hypermetropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000579<a name=\"hpo-HP.580000579\"> </a></td><td>Nasolacrimal duct obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0000684<a name=\"hpo-HP.580000684\"> </a></td><td>Delayed eruption of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000960<a name=\"hpo-HP.580000960\"> </a></td><td>Sacral dimple</td></tr><tr><td style=\"white-space:nowrap\">HP:0000998<a name=\"hpo-HP.580000998\"> </a></td><td>Hypertrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001643<a name=\"hpo-HP.580001643\"> </a></td><td>Patent ductus arteriosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010813<a name=\"hpo-HP.580010813\"> </a></td><td>Abnormal number of hair whorls</td></tr><tr><td style=\"white-space:nowrap\">HP:0012384<a name=\"hpo-HP.580012384\"> </a></td><td>Rhinitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012745<a name=\"hpo-HP.580012745\"> </a></td><td>Short palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000359<a name=\"hpo-HP.580000359\"> </a></td><td>Abnormality of the inner ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000429<a name=\"hpo-HP.580000429\"> </a></td><td>Abnormality of the nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000436<a name=\"hpo-HP.580000436\"> </a></td><td>Abnormality of the nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000499<a name=\"hpo-HP.580000499\"> </a></td><td>Abnormal eyelash morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000534<a name=\"hpo-HP.580000534\"> </a></td><td>Abnormal eyebrow morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000951<a name=\"hpo-HP.580000951\"> </a></td><td>Abnormality of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001000<a name=\"hpo-HP.580001000\"> </a></td><td>Abnormality of skin pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001597<a name=\"hpo-HP.580001597\"> </a></td><td>Abnormality of the nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0006483<a name=\"hpo-HP.580006483\"> </a></td><td>Abnormal number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009929<a name=\"hpo-HP.580009929\"> </a></td><td>Abnormality of the columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0011119<a name=\"hpo-HP.580011119\"> </a></td><td>Abnormality of the nasal dorsum</td></tr><tr><td style=\"white-space:nowrap\">HP:0012808<a name=\"hpo-HP.580012808\"> </a></td><td>Abnormal nasal base</td></tr><tr><td style=\"white-space:nowrap\">HP:0100490<a name=\"hpo-HP.580100490\"> </a></td><td>Camptodactyly of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0000964<a name=\"hpo-HP.580000964\"> </a></td><td>Eczema</td></tr><tr><td style=\"white-space:nowrap\">HP:0004442<a name=\"hpo-HP.580004442\"> </a></td><td>Sagittal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000414<a name=\"hpo-HP.580000414\"> </a></td><td>Bulbous nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0003180<a name=\"hpo-HP.580003180\"> </a></td><td>Flat acetabular roof</td></tr><tr><td style=\"white-space:nowrap\">HP:0000422<a name=\"hpo-HP.580000422\"> </a></td><td>Abnormality of the nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000614<a name=\"hpo-HP.580000614\"> </a></td><td>Abnormal nasolacrimal system morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001167<a name=\"hpo-HP.580001167\"> </a></td><td>Abnormality of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0001595<a name=\"hpo-HP.580001595\"> </a></td><td>Abnormal hair morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012373<a name=\"hpo-HP.580012373\"> </a></td><td>Abnormal eye physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001655<a name=\"hpo-HP.580001655\"> </a></td><td>Patent foramen ovale</td></tr><tr><td style=\"white-space:nowrap\">HP:0001647<a name=\"hpo-HP.580001647\"> </a></td><td>Bicuspid aortic valve</td></tr><tr><td style=\"white-space:nowrap\">HP:0000574<a name=\"hpo-HP.580000574\"> </a></td><td>Thick eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0001169<a name=\"hpo-HP.580001169\"> </a></td><td>Broad palm</td></tr><tr><td style=\"white-space:nowrap\">HP:0006471<a name=\"hpo-HP.580006471\"> </a></td><td>Fixed elbow flexion</td></tr><tr><td style=\"white-space:nowrap\">HP:0008689<a name=\"hpo-HP.580008689\"> </a></td><td>Bilateral cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011304<a name=\"hpo-HP.580011304\"> </a></td><td>Broad thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0005110<a name=\"hpo-HP.580005110\"> </a></td><td>Atrial fibrillation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001633<a name=\"hpo-HP.580001633\"> </a></td><td>Abnormal mitral valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001641<a name=\"hpo-HP.580001641\"> </a></td><td>Abnormal pulmonary valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001702<a name=\"hpo-HP.580001702\"> </a></td><td>Abnormal tricuspid valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000012<a name=\"hpo-HP.580000012\"> </a></td><td>Urinary urgency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000020<a name=\"hpo-HP.580000020\"> </a></td><td>Urinary incontinence</td></tr><tr><td style=\"white-space:nowrap\">HP:0000131<a name=\"hpo-HP.580000131\"> </a></td><td>Uterine leiomyoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000132<a name=\"hpo-HP.580000132\"> </a></td><td>Menorrhagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000138<a name=\"hpo-HP.580000138\"> </a></td><td>Ovarian cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0000853<a name=\"hpo-HP.580000853\"> </a></td><td>Goiter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000953<a name=\"hpo-HP.580000953\"> </a></td><td>Hyperpigmentation of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001061<a name=\"hpo-HP.580001061\"> </a></td><td>Acne</td></tr><tr><td style=\"white-space:nowrap\">HP:0002315<a name=\"hpo-HP.580002315\"> </a></td><td>Headache</td></tr><tr><td style=\"white-space:nowrap\">HP:0004324<a name=\"hpo-HP.580004324\"> </a></td><td>Increased body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000069<a name=\"hpo-HP.580000069\"> </a></td><td>Abnormality of the ureter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000077<a name=\"hpo-HP.580000077\"> </a></td><td>Abnormality of the kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0000759<a name=\"hpo-HP.580000759\"> </a></td><td>Abnormal peripheral nervous system morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008069<a name=\"hpo-HP.580008069\"> </a></td><td>Neoplasm of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011276<a name=\"hpo-HP.580011276\"> </a></td><td>Vascular skin abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000705<a name=\"hpo-HP.580000705\"> </a></td><td>Amelogenesis imperfecta</td></tr><tr><td style=\"white-space:nowrap\">HP:0001256<a name=\"hpo-HP.580001256\"> </a></td><td>Intellectual disability, mild</td></tr><tr><td style=\"white-space:nowrap\">HP:0000325<a name=\"hpo-HP.580000325\"> </a></td><td>Triangular face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000160<a name=\"hpo-HP.580000160\"> </a></td><td>Narrow mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009487<a name=\"hpo-HP.580009487\"> </a></td><td>Ulnar deviation of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0001249<a name=\"hpo-HP.580001249\"> </a></td><td>Intellectual disability</td></tr><tr><td style=\"white-space:nowrap\">HP:0008064<a name=\"hpo-HP.580008064\"> </a></td><td>Ichthyosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000311<a name=\"hpo-HP.580000311\"> </a></td><td>Round face</td></tr><tr><td style=\"white-space:nowrap\">HP:0001653<a name=\"hpo-HP.580001653\"> </a></td><td>Mitral regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001771<a name=\"hpo-HP.580001771\"> </a></td><td>Achilles tendon contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0012032<a name=\"hpo-HP.580012032\"> </a></td><td>Lipoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0012368<a name=\"hpo-HP.580012368\"> </a></td><td>Flat face</td></tr><tr><td style=\"white-space:nowrap\">HP:0030053<a name=\"hpo-HP.580030053\"> </a></td><td>Stiff skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011124<a name=\"hpo-HP.580011124\"> </a></td><td>Abnormality of epidermal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011097<a name=\"hpo-HP.580011097\"> </a></td><td>Epileptic spasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000407<a name=\"hpo-HP.580000407\"> </a></td><td>Sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000331<a name=\"hpo-HP.580000331\"> </a></td><td>Short chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000340<a name=\"hpo-HP.580000340\"> </a></td><td>Sloping forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0000486<a name=\"hpo-HP.580000486\"> </a></td><td>Strabismus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000713<a name=\"hpo-HP.580000713\"> </a></td><td>Agitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000802<a name=\"hpo-HP.580000802\"> </a></td><td>Impotence</td></tr><tr><td style=\"white-space:nowrap\">HP:0001272<a name=\"hpo-HP.580001272\"> </a></td><td>Cerebellar atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001276<a name=\"hpo-HP.580001276\"> </a></td><td>Hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001321<a name=\"hpo-HP.580001321\"> </a></td><td>Cerebellar hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001322<a name=\"hpo-HP.580001322\"> </a></td><td>obsolete Brain very small</td></tr><tr><td style=\"white-space:nowrap\">HP:0002061<a name=\"hpo-HP.580002061\"> </a></td><td>Lower limb spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002529<a name=\"hpo-HP.580002529\"> </a></td><td>Neuronal loss in central nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002540<a name=\"hpo-HP.580002540\"> </a></td><td>Inability to walk</td></tr><tr><td style=\"white-space:nowrap\">HP:0005484<a name=\"hpo-HP.580005484\"> </a></td><td>Postnatal microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0012850<a name=\"hpo-HP.580012850\"> </a></td><td>Small intestinal dysmotility</td></tr><tr><td style=\"white-space:nowrap\">HP:0000504<a name=\"hpo-HP.580000504\"> </a></td><td>Abnormality of vision</td></tr><tr><td style=\"white-space:nowrap\">HP:0002118<a name=\"hpo-HP.580002118\"> </a></td><td>Abnormality of the cerebral ventricles</td></tr><tr><td style=\"white-space:nowrap\">HP:0002363<a name=\"hpo-HP.580002363\"> </a></td><td>Abnormality of brainstem morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0010651<a name=\"hpo-HP.580010651\"> </a></td><td>Abnormal meningeal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100024<a name=\"hpo-HP.580100024\"> </a></td><td>Conspicuously happy disposition</td></tr><tr><td style=\"white-space:nowrap\">HP:0002538<a name=\"hpo-HP.580002538\"> </a></td><td>Abnormality of the cerebral cortex</td></tr><tr><td style=\"white-space:nowrap\">HP:0000054<a name=\"hpo-HP.580000054\"> </a></td><td>Micropenis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000215<a name=\"hpo-HP.580000215\"> </a></td><td>Thick upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000293<a name=\"hpo-HP.580000293\"> </a></td><td>Full cheeks</td></tr><tr><td style=\"white-space:nowrap\">HP:0000349<a name=\"hpo-HP.580000349\"> </a></td><td>Widow's peak</td></tr><tr><td style=\"white-space:nowrap\">HP:0000444<a name=\"hpo-HP.580000444\"> </a></td><td>Convex nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000506<a name=\"hpo-HP.580000506\"> </a></td><td>Telecanthus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000592<a name=\"hpo-HP.580000592\"> </a></td><td>Blue sclerae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000691<a name=\"hpo-HP.580000691\"> </a></td><td>Microdontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000698<a name=\"hpo-HP.580000698\"> </a></td><td>Conical tooth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002000<a name=\"hpo-HP.580002000\"> </a></td><td>Short columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0002097<a name=\"hpo-HP.580002097\"> </a></td><td>Emphysema</td></tr><tr><td style=\"white-space:nowrap\">HP:0002209<a name=\"hpo-HP.580002209\"> </a></td><td>Sparse scalp hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002816<a name=\"hpo-HP.580002816\"> </a></td><td>Genu recurvatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0005116<a name=\"hpo-HP.580005116\"> </a></td><td>Arterial tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0007957<a name=\"hpo-HP.580007957\"> </a></td><td>Corneal opacity</td></tr><tr><td style=\"white-space:nowrap\">HP:0008070<a name=\"hpo-HP.580008070\"> </a></td><td>Sparse hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0009623<a name=\"hpo-HP.580009623\"> </a></td><td>Proximal placement of thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0010055<a name=\"hpo-HP.580010055\"> </a></td><td>Broad hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0011318<a name=\"hpo-HP.580011318\"> </a></td><td>Bicoronal synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011968<a name=\"hpo-HP.580011968\"> </a></td><td>Feeding difficulties</td></tr><tr><td style=\"white-space:nowrap\">HP:0200067<a name=\"hpo-HP.580200067\"> </a></td><td>Recurrent spontaneous abortion</td></tr><tr><td style=\"white-space:nowrap\">HP:0011819<a name=\"hpo-HP.580011819\"> </a></td><td>Submucous cleft soft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000268<a name=\"hpo-HP.580000268\"> </a></td><td>Dolichocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0003302<a name=\"hpo-HP.580003302\"> </a></td><td>Spondylolisthesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000582<a name=\"hpo-HP.580000582\"> </a></td><td>Upslanted palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000952<a name=\"hpo-HP.580000952\"> </a></td><td>Jaundice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001298<a name=\"hpo-HP.580001298\"> </a></td><td>Encephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001396<a name=\"hpo-HP.580001396\"> </a></td><td>Cholestasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002059<a name=\"hpo-HP.580002059\"> </a></td><td>Cerebral atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002171<a name=\"hpo-HP.580002171\"> </a></td><td>Gliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002240<a name=\"hpo-HP.580002240\"> </a></td><td>Hepatomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002353<a name=\"hpo-HP.580002353\"> </a></td><td>EEG abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0002446<a name=\"hpo-HP.580002446\"> </a></td><td>Astrocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003287<a name=\"hpo-HP.580003287\"> </a></td><td>Abnormality of mitochondrial metabolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011449<a name=\"hpo-HP.580011449\"> </a></td><td>Knee clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012852<a name=\"hpo-HP.580012852\"> </a></td><td>Hepatic bridging fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100626<a name=\"hpo-HP.580100626\"> </a></td><td>Chronic hepatic failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000385<a name=\"hpo-HP.580000385\"> </a></td><td>Small earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0009748<a name=\"hpo-HP.580009748\"> </a></td><td>Large earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000157<a name=\"hpo-HP.580000157\"> </a></td><td>Abnormality of the tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0000172<a name=\"hpo-HP.580000172\"> </a></td><td>Abnormality of the uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000174<a name=\"hpo-HP.580000174\"> </a></td><td>Abnormal palate morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000306<a name=\"hpo-HP.580000306\"> </a></td><td>Abnormality of the chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0004408<a name=\"hpo-HP.580004408\"> </a></td><td>Abnormality of the sense of smell</td></tr><tr><td style=\"white-space:nowrap\">HP:0009912<a name=\"hpo-HP.580009912\"> </a></td><td>Abnormality of the tragus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000537<a name=\"hpo-HP.580000537\"> </a></td><td>Epicanthus inversus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000565<a name=\"hpo-HP.580000565\"> </a></td><td>Esotropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000752<a name=\"hpo-HP.580000752\"> </a></td><td>Hyperactivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003186<a name=\"hpo-HP.580003186\"> </a></td><td>Inverted nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0012503<a name=\"hpo-HP.580012503\"> </a></td><td>Abnormality of the pituitary gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0100710<a name=\"hpo-HP.580100710\"> </a></td><td>Impulsivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000357<a name=\"hpo-HP.580000357\"> </a></td><td>Abnormal location of ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0000820<a name=\"hpo-HP.580000820\"> </a></td><td>Abnormality of the thyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000828<a name=\"hpo-HP.580000828\"> </a></td><td>Abnormality of the parathyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000834<a name=\"hpo-HP.580000834\"> </a></td><td>Abnormality of the adrenal glands</td></tr><tr><td style=\"white-space:nowrap\">HP:0012093<a name=\"hpo-HP.580012093\"> </a></td><td>Abnormality of endocrine pancreas physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000269<a name=\"hpo-HP.580000269\"> </a></td><td>Prominent occiput</td></tr><tr><td style=\"white-space:nowrap\">HP:0000535<a name=\"hpo-HP.580000535\"> </a></td><td>Sparse and thin eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000639<a name=\"hpo-HP.580000639\"> </a></td><td>Nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000718<a name=\"hpo-HP.580000718\"> </a></td><td>Aggressive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000957<a name=\"hpo-HP.580000957\"> </a></td><td>Cafe-au-lait spot</td></tr><tr><td style=\"white-space:nowrap\">HP:0000256<a name=\"hpo-HP.580000256\"> </a></td><td>Macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000750<a name=\"hpo-HP.580000750\"> </a></td><td>Delayed speech and language development</td></tr><tr><td style=\"white-space:nowrap\">HP:0000963<a name=\"hpo-HP.580000963\"> </a></td><td>Thin skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001260<a name=\"hpo-HP.580001260\"> </a></td><td>Dysarthria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002194<a name=\"hpo-HP.580002194\"> </a></td><td>Delayed gross motor development</td></tr><tr><td style=\"white-space:nowrap\">HP:0003196<a name=\"hpo-HP.580003196\"> </a></td><td>Short nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0001155<a name=\"hpo-HP.580001155\"> </a></td><td>Abnormality of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0100022<a name=\"hpo-HP.580100022\"> </a></td><td>Abnormality of movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010862<a name=\"hpo-HP.580010862\"> </a></td><td>Delayed fine motor development</td></tr><tr><td style=\"white-space:nowrap\">HP:0000343<a name=\"hpo-HP.580000343\"> </a></td><td>Long philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000717<a name=\"hpo-HP.580000717\"> </a></td><td>Autism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001883<a name=\"hpo-HP.580001883\"> </a></td><td>Talipes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002553<a name=\"hpo-HP.580002553\"> </a></td><td>Highly arched eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0007488<a name=\"hpo-HP.580007488\"> </a></td><td>Diffuse skin atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000822<a name=\"hpo-HP.580000822\"> </a></td><td>Hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001278<a name=\"hpo-HP.580001278\"> </a></td><td>Orthostatic hypotension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001944<a name=\"hpo-HP.580001944\"> </a></td><td>Dehydration</td></tr><tr><td style=\"white-space:nowrap\">HP:0001945<a name=\"hpo-HP.580001945\"> </a></td><td>Fever</td></tr><tr><td style=\"white-space:nowrap\">HP:0002019<a name=\"hpo-HP.580002019\"> </a></td><td>Constipation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002020<a name=\"hpo-HP.580002020\"> </a></td><td>Gastroesophageal reflux</td></tr><tr><td style=\"white-space:nowrap\">HP:0002027<a name=\"hpo-HP.580002027\"> </a></td><td>Abdominal pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0002718<a name=\"hpo-HP.580002718\"> </a></td><td>Recurrent bacterial infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0002841<a name=\"hpo-HP.580002841\"> </a></td><td>Recurrent fungal infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0004395<a name=\"hpo-HP.580004395\"> </a></td><td>Malnutrition</td></tr><tr><td style=\"white-space:nowrap\">HP:0009830<a name=\"hpo-HP.580009830\"> </a></td><td>Peripheral neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000126<a name=\"hpo-HP.580000126\"> </a></td><td>Hydronephrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000519<a name=\"hpo-HP.580000519\"> </a></td><td>Developmental cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000648<a name=\"hpo-HP.580000648\"> </a></td><td>Optic atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001053<a name=\"hpo-HP.580001053\"> </a></td><td>Hypopigmented skin patches</td></tr><tr><td style=\"white-space:nowrap\">HP:0001087<a name=\"hpo-HP.580001087\"> </a></td><td>Developmental glaucoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0002119<a name=\"hpo-HP.580002119\"> </a></td><td>Ventriculomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002280<a name=\"hpo-HP.580002280\"> </a></td><td>Enlarged cisterna magna</td></tr><tr><td style=\"white-space:nowrap\">HP:0003298<a name=\"hpo-HP.580003298\"> </a></td><td>Spina bifida occulta</td></tr><tr><td style=\"white-space:nowrap\">HP:0004467<a name=\"hpo-HP.580004467\"> </a></td><td>Preauricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0008511<a name=\"hpo-HP.580008511\"> </a></td><td>Central posterior corneal opacity</td></tr><tr><td style=\"white-space:nowrap\">HP:0010780<a name=\"hpo-HP.580010780\"> </a></td><td>Hyperacusis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030048<a name=\"hpo-HP.580030048\"> </a></td><td>Colpocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0100335<a name=\"hpo-HP.580100335\"> </a></td><td>Non-midline cleft lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000525<a name=\"hpo-HP.580000525\"> </a></td><td>Abnormality iris morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002719<a name=\"hpo-HP.580002719\"> </a></td><td>Recurrent infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0000153<a name=\"hpo-HP.580000153\"> </a></td><td>Abnormality of the mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001903<a name=\"hpo-HP.580001903\"> </a></td><td>Anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002094<a name=\"hpo-HP.580002094\"> </a></td><td>Dyspnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002206<a name=\"hpo-HP.580002206\"> </a></td><td>Pulmonary fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002789<a name=\"hpo-HP.580002789\"> </a></td><td>Tachypnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002793<a name=\"hpo-HP.580002793\"> </a></td><td>Abnormal pattern of respiration</td></tr><tr><td style=\"white-space:nowrap\">HP:0003565<a name=\"hpo-HP.580003565\"> </a></td><td>Elevated erythrocyte sedimentation rate</td></tr><tr><td style=\"white-space:nowrap\">HP:0006517<a name=\"hpo-HP.580006517\"> </a></td><td>Intraalveolar phospholipid accumulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0006530<a name=\"hpo-HP.580006530\"> </a></td><td>Interstitial pulmonary abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0100759<a name=\"hpo-HP.580100759\"> </a></td><td>Clubbing of fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0002103<a name=\"hpo-HP.580002103\"> </a></td><td>Abnormal pleura morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001596<a name=\"hpo-HP.580001596\"> </a></td><td>Alopecia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001882<a name=\"hpo-HP.580001882\"> </a></td><td>Leukopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002013<a name=\"hpo-HP.580002013\"> </a></td><td>Vomiting</td></tr><tr><td style=\"white-space:nowrap\">HP:0002028<a name=\"hpo-HP.580002028\"> </a></td><td>Chronic diarrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002573<a name=\"hpo-HP.580002573\"> </a></td><td>Hematochezia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002960<a name=\"hpo-HP.580002960\"> </a></td><td>Autoimmunity</td></tr><tr><td style=\"white-space:nowrap\">HP:0005387<a name=\"hpo-HP.580005387\"> </a></td><td>Combined immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0011109<a name=\"hpo-HP.580011109\"> </a></td><td>Chronic sinusitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004429<a name=\"hpo-HP.580004429\"> </a></td><td>Recurrent viral infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0000280<a name=\"hpo-HP.580000280\"> </a></td><td>Coarse facial features</td></tr><tr><td style=\"white-space:nowrap\">HP:0000294<a name=\"hpo-HP.580000294\"> </a></td><td>Low anterior hairline</td></tr><tr><td style=\"white-space:nowrap\">HP:0000577<a name=\"hpo-HP.580000577\"> </a></td><td>Exotropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001873<a name=\"hpo-HP.580001873\"> </a></td><td>Thrombocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002011<a name=\"hpo-HP.580002011\"> </a></td><td>Morphological central nervous system abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0006610<a name=\"hpo-HP.580006610\"> </a></td><td>Wide intermamillary distance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011231<a name=\"hpo-HP.580011231\"> </a></td><td>Prominent eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0012718<a name=\"hpo-HP.580012718\"> </a></td><td>Morphological abnormality of the gastrointestinal tract</td></tr><tr><td style=\"white-space:nowrap\">HP:0002024<a name=\"hpo-HP.580002024\"> </a></td><td>Malabsorption</td></tr><tr><td style=\"white-space:nowrap\">HP:0001394<a name=\"hpo-HP.580001394\"> </a></td><td>Cirrhosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001414<a name=\"hpo-HP.580001414\"> </a></td><td>Microvesicular hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001403<a name=\"hpo-HP.580001403\"> </a></td><td>Macrovesicular hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001410<a name=\"hpo-HP.580001410\"> </a></td><td>Decreased liver function</td></tr><tr><td style=\"white-space:nowrap\">HP:0001409<a name=\"hpo-HP.580001409\"> </a></td><td>Portal hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001744<a name=\"hpo-HP.580001744\"> </a></td><td>Splenomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0003394<a name=\"hpo-HP.580003394\"> </a></td><td>Muscle spasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003750<a name=\"hpo-HP.580003750\"> </a></td><td>Increased muscle fatiguability</td></tr><tr><td style=\"white-space:nowrap\">HP:0002123<a name=\"hpo-HP.580002123\"> </a></td><td>Generalized myoclonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0002219<a name=\"hpo-HP.580002219\"> </a></td><td>Facial hypertrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000831<a name=\"hpo-HP.580000831\"> </a></td><td>Insulin-resistant diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001891<a name=\"hpo-HP.580001891\"> </a></td><td>Iron deficiency anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001264<a name=\"hpo-HP.580001264\"> </a></td><td>Spastic diplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002313<a name=\"hpo-HP.580002313\"> </a></td><td>Spastic paraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001347<a name=\"hpo-HP.580001347\"> </a></td><td>Hyperreflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002460<a name=\"hpo-HP.580002460\"> </a></td><td>Distal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000763<a name=\"hpo-HP.580000763\"> </a></td><td>Sensory neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001268<a name=\"hpo-HP.580001268\"> </a></td><td>Mental deterioration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002169<a name=\"hpo-HP.580002169\"> </a></td><td>Clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001332<a name=\"hpo-HP.580001332\"> </a></td><td>Dystonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100716<a name=\"hpo-HP.580100716\"> </a></td><td>Self-injurious behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000602<a name=\"hpo-HP.580000602\"> </a></td><td>Ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001251<a name=\"hpo-HP.580001251\"> </a></td><td>Ataxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000776<a name=\"hpo-HP.580000776\"> </a></td><td>Congenital diaphragmatic hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000410<a name=\"hpo-HP.580000410\"> </a></td><td>Mixed hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000510<a name=\"hpo-HP.580000510\"> </a></td><td>Rod-cone dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0004437<a name=\"hpo-HP.580004437\"> </a></td><td>Cranial hyperostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011001<a name=\"hpo-HP.580011001\"> </a></td><td>Increased bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0000956<a name=\"hpo-HP.580000956\"> </a></td><td>Acanthosis nigricans</td></tr><tr><td style=\"white-space:nowrap\">HP:0000958<a name=\"hpo-HP.580000958\"> </a></td><td>Dry skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000580<a name=\"hpo-HP.580000580\"> </a></td><td>Pigmentary retinopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000649<a name=\"hpo-HP.580000649\"> </a></td><td>Abnormality of visual evoked potentials</td></tr><tr><td style=\"white-space:nowrap\">HP:0000657<a name=\"hpo-HP.580000657\"> </a></td><td>Oculomotor apraxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000479<a name=\"hpo-HP.580000479\"> </a></td><td>Abnormal retinal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001317<a name=\"hpo-HP.580001317\"> </a></td><td>Abnormal cerebellum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001533<a name=\"hpo-HP.580001533\"> </a></td><td>Slender build</td></tr><tr><td style=\"white-space:nowrap\">HP:0001629<a name=\"hpo-HP.580001629\"> </a></td><td>Ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0000703<a name=\"hpo-HP.580000703\"> </a></td><td>Dentinogenesis imperfecta</td></tr><tr><td style=\"white-space:nowrap\">HP:0000914<a name=\"hpo-HP.580000914\"> </a></td><td>Shield chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0001500<a name=\"hpo-HP.580001500\"> </a></td><td>Broad finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0003086<a name=\"hpo-HP.580003086\"> </a></td><td>Acromesomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003416<a name=\"hpo-HP.580003416\"> </a></td><td>Spinal canal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002815<a name=\"hpo-HP.580002815\"> </a></td><td>Abnormality of the knee</td></tr><tr><td style=\"white-space:nowrap\">HP:0002992<a name=\"hpo-HP.580002992\"> </a></td><td>Abnormality of tibia morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001639<a name=\"hpo-HP.580001639\"> </a></td><td>Hypertrophic cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003236<a name=\"hpo-HP.580003236\"> </a></td><td>Elevated serum creatine kinase</td></tr><tr><td style=\"white-space:nowrap\">HP:0001369<a name=\"hpo-HP.580001369\"> </a></td><td>Arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003560<a name=\"hpo-HP.580003560\"> </a></td><td>Muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003974<a name=\"hpo-HP.580003974\"> </a></td><td>Absent radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0002818<a name=\"hpo-HP.580002818\"> </a></td><td>Abnormality of the radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0001561<a name=\"hpo-HP.580001561\"> </a></td><td>Polyhydramnios</td></tr><tr><td style=\"white-space:nowrap\">HP:0002299<a name=\"hpo-HP.580002299\"> </a></td><td>Brittle hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002208<a name=\"hpo-HP.580002208\"> </a></td><td>Coarse hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002213<a name=\"hpo-HP.580002213\"> </a></td><td>Fine hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000522<a name=\"hpo-HP.580000522\"> </a></td><td>Alacrima</td></tr><tr><td style=\"white-space:nowrap\">HP:0100704<a name=\"hpo-HP.580100704\"> </a></td><td>Cerebral visual impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0012713<a name=\"hpo-HP.580012713\"> </a></td><td>Moderate hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002307<a name=\"hpo-HP.580002307\"> </a></td><td>Drooling</td></tr><tr><td style=\"white-space:nowrap\">HP:0002714<a name=\"hpo-HP.580002714\"> </a></td><td>Downturned corners of mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000191<a name=\"hpo-HP.580000191\"> </a></td><td>Accessory oral frenulum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000158<a name=\"hpo-HP.580000158\"> </a></td><td>Macroglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012020<a name=\"hpo-HP.580012020\"> </a></td><td>Right aortic arch</td></tr><tr><td style=\"white-space:nowrap\">HP:0002104<a name=\"hpo-HP.580002104\"> </a></td><td>Apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0000598<a name=\"hpo-HP.580000598\"> </a></td><td>Abnormality of the ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0007874<a name=\"hpo-HP.580007874\"> </a></td><td>Almond-shaped palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0010804<a name=\"hpo-HP.580010804\"> </a></td><td>Tented upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000885<a name=\"hpo-HP.580000885\"> </a></td><td>Broad ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000768<a name=\"hpo-HP.580000768\"> </a></td><td>Pectus carinatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001680<a name=\"hpo-HP.580001680\"> </a></td><td>Coarctation of aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0000687<a name=\"hpo-HP.580000687\"> </a></td><td>Widely spaced teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000047<a name=\"hpo-HP.580000047\"> </a></td><td>Hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0001943<a name=\"hpo-HP.580001943\"> </a></td><td>Hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012369<a name=\"hpo-HP.580012369\"> </a></td><td>Abnormality of malar bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0009900<a name=\"hpo-HP.580009900\"> </a></td><td>Unilateral deafness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000023<a name=\"hpo-HP.580000023\"> </a></td><td>Inguinal hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000074<a name=\"hpo-HP.580000074\"> </a></td><td>Ureteropelvic junction obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001800<a name=\"hpo-HP.580001800\"> </a></td><td>Hypoplastic toenails</td></tr><tr><td style=\"white-space:nowrap\">HP:0001804<a name=\"hpo-HP.580001804\"> </a></td><td>Hypoplastic fingernail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002949<a name=\"hpo-HP.580002949\"> </a></td><td>Fused cervical vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0008050<a name=\"hpo-HP.580008050\"> </a></td><td>Abnormality of the palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0008577<a name=\"hpo-HP.580008577\"> </a></td><td>Underfolded helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0008589<a name=\"hpo-HP.580008589\"> </a></td><td>Hypoplastic helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0010863<a name=\"hpo-HP.580010863\"> </a></td><td>Receptive language delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0002282<a name=\"hpo-HP.580002282\"> </a></td><td>Gray matter heterotopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002085<a name=\"hpo-HP.580002085\"> </a></td><td>Occipital encephalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0001057<a name=\"hpo-HP.580001057\"> </a></td><td>Aplasia cutis congenita</td></tr><tr><td style=\"white-space:nowrap\">HP:0000211<a name=\"hpo-HP.580000211\"> </a></td><td>Trismus</td></tr><tr><td style=\"white-space:nowrap\">HP:0008422<a name=\"hpo-HP.580008422\"> </a></td><td>Vertebral wedging</td></tr><tr><td style=\"white-space:nowrap\">HP:0003170<a name=\"hpo-HP.580003170\"> </a></td><td>Abnormality of the acetabulum</td></tr><tr><td style=\"white-space:nowrap\">HP:0003272<a name=\"hpo-HP.580003272\"> </a></td><td>Abnormality of the hip bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0003028<a name=\"hpo-HP.580003028\"> </a></td><td>Abnormality of the ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0003301<a name=\"hpo-HP.580003301\"> </a></td><td>Irregular vertebral endplates</td></tr><tr><td style=\"white-space:nowrap\">HP:0010508<a name=\"hpo-HP.580010508\"> </a></td><td>Metatarsus valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0009811<a name=\"hpo-HP.580009811\"> </a></td><td>Abnormality of the elbow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000736<a name=\"hpo-HP.580000736\"> </a></td><td>Short attention span</td></tr><tr><td style=\"white-space:nowrap\">HP:0002912<a name=\"hpo-HP.580002912\"> </a></td><td>Methylmalonic acidemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001941<a name=\"hpo-HP.580001941\"> </a></td><td>Acidosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001992<a name=\"hpo-HP.580001992\"> </a></td><td>Organic aciduria</td></tr><tr><td style=\"white-space:nowrap\">HP:0009027<a name=\"hpo-HP.580009027\"> </a></td><td>Foot dorsiflexor weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002063<a name=\"hpo-HP.580002063\"> </a></td><td>Rigidity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000384<a name=\"hpo-HP.580000384\"> </a></td><td>Preauricular skin tag</td></tr><tr><td style=\"white-space:nowrap\">HP:0200046<a name=\"hpo-HP.580200046\"> </a></td><td>Cat cry</td></tr><tr><td style=\"white-space:nowrap\">HP:0001357<a name=\"hpo-HP.580001357\"> </a></td><td>Plagiocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000670<a name=\"hpo-HP.580000670\"> </a></td><td>Carious teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0011090<a name=\"hpo-HP.580011090\"> </a></td><td>Fused teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0012810<a name=\"hpo-HP.580012810\"> </a></td><td>Wide nasal base</td></tr><tr><td style=\"white-space:nowrap\">HP:0010296<a name=\"hpo-HP.580010296\"> </a></td><td>Ankyloglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001636<a name=\"hpo-HP.580001636\"> </a></td><td>Tetralogy of Fallot</td></tr><tr><td style=\"white-space:nowrap\">HP:0001305<a name=\"hpo-HP.580001305\"> </a></td><td>Dandy-Walker malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000238<a name=\"hpo-HP.580000238\"> </a></td><td>Hydrocephalus</td></tr><tr><td style=\"white-space:nowrap\">HP:0005469<a name=\"hpo-HP.580005469\"> </a></td><td>Flat occiput</td></tr><tr><td style=\"white-space:nowrap\">HP:0000270<a name=\"hpo-HP.580000270\"> </a></td><td>Delayed cranial suture closure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000239<a name=\"hpo-HP.580000239\"> </a></td><td>Large fontanelles</td></tr><tr><td style=\"white-space:nowrap\">HP:0010537<a name=\"hpo-HP.580010537\"> </a></td><td>Wide cranial sutures</td></tr><tr><td style=\"white-space:nowrap\">HP:0002217<a name=\"hpo-HP.580002217\"> </a></td><td>Slow-growing hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000587<a name=\"hpo-HP.580000587\"> </a></td><td>Abnormality of the optic nerve</td></tr><tr><td style=\"white-space:nowrap\">HP:0005989<a name=\"hpo-HP.580005989\"> </a></td><td>Redundant neck skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010775<a name=\"hpo-HP.580010775\"> </a></td><td>Vascular ring</td></tr><tr><td style=\"white-space:nowrap\">HP:0002779<a name=\"hpo-HP.580002779\"> </a></td><td>Tracheomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002827<a name=\"hpo-HP.580002827\"> </a></td><td>Hip dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001302<a name=\"hpo-HP.580001302\"> </a></td><td>Pachygyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0007362<a name=\"hpo-HP.580007362\"> </a></td><td>Aplasia/Hypoplasia of the brainstem</td></tr><tr><td style=\"white-space:nowrap\">HP:0001558<a name=\"hpo-HP.580001558\"> </a></td><td>Decreased fetal movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010878<a name=\"hpo-HP.580010878\"> </a></td><td>Fetal cystic hygroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0011398<a name=\"hpo-HP.580011398\"> </a></td><td>Central hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002071<a name=\"hpo-HP.580002071\"> </a></td><td>Abnormality of extrapyramidal motor function</td></tr><tr><td style=\"white-space:nowrap\">HP:0000826<a name=\"hpo-HP.580000826\"> </a></td><td>Precocious puberty</td></tr><tr><td style=\"white-space:nowrap\">HP:0000014<a name=\"hpo-HP.580000014\"> </a></td><td>Abnormality of the bladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0005037<a name=\"hpo-HP.580005037\"> </a></td><td>Proximal radio-ulnar synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100543<a name=\"hpo-HP.580100543\"> </a></td><td>Cognitive impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000481<a name=\"hpo-HP.580000481\"> </a></td><td>Abnormal cornea morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000076<a name=\"hpo-HP.580000076\"> </a></td><td>Vesicoureteral reflux</td></tr><tr><td style=\"white-space:nowrap\">HP:0000297<a name=\"hpo-HP.580000297\"> </a></td><td>Facial hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000391<a name=\"hpo-HP.580000391\"> </a></td><td>Thickened helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0001162<a name=\"hpo-HP.580001162\"> </a></td><td>Postaxial hand polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001385<a name=\"hpo-HP.580001385\"> </a></td><td>Hip dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002342<a name=\"hpo-HP.580002342\"> </a></td><td>Intellectual disability, moderate</td></tr><tr><td style=\"white-space:nowrap\">HP:0003191<a name=\"hpo-HP.580003191\"> </a></td><td>Cleft ala nasi</td></tr><tr><td style=\"white-space:nowrap\">HP:0009765<a name=\"hpo-HP.580009765\"> </a></td><td>Low hanging columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0010297<a name=\"hpo-HP.580010297\"> </a></td><td>Bifid tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0011330<a name=\"hpo-HP.580011330\"> </a></td><td>Metopic synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012804<a name=\"hpo-HP.580012804\"> </a></td><td>Corneal ulceration</td></tr><tr><td style=\"white-space:nowrap\">HP:0010485<a name=\"hpo-HP.580010485\"> </a></td><td>Hyperextensibility at elbow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000609<a name=\"hpo-HP.580000609\"> </a></td><td>Optic nerve hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001176<a name=\"hpo-HP.580001176\"> </a></td><td>Large hands</td></tr><tr><td style=\"white-space:nowrap\">HP:0004233<a name=\"hpo-HP.580004233\"> </a></td><td>Advanced ossification of carpal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0100842<a name=\"hpo-HP.580100842\"> </a></td><td>Septo-optic dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002034<a name=\"hpo-HP.580002034\"> </a></td><td>Abnormality of the rectum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002283<a name=\"hpo-HP.580002283\"> </a></td><td>Global brain atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003115<a name=\"hpo-HP.580003115\"> </a></td><td>Abnormal EKG</td></tr><tr><td style=\"white-space:nowrap\">HP:0002577<a name=\"hpo-HP.580002577\"> </a></td><td>Abnormal stomach morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002539<a name=\"hpo-HP.580002539\"> </a></td><td>Cortical dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006818<a name=\"hpo-HP.580006818\"> </a></td><td>4-layered lissencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000593<a name=\"hpo-HP.580000593\"> </a></td><td>Abnormal anterior chamber morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000179<a name=\"hpo-HP.580000179\"> </a></td><td>Thick lower lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002002<a name=\"hpo-HP.580002002\"> </a></td><td>Deep philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0009931<a name=\"hpo-HP.580009931\"> </a></td><td>Enlarged naris</td></tr><tr><td style=\"white-space:nowrap\">HP:0002948<a name=\"hpo-HP.580002948\"> </a></td><td>Vertebral fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002937<a name=\"hpo-HP.580002937\"> </a></td><td>Hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0002308<a name=\"hpo-HP.580002308\"> </a></td><td>Arnold-Chiari malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011320<a name=\"hpo-HP.580011320\"> </a></td><td>Unilambdoid synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002781<a name=\"hpo-HP.580002781\"> </a></td><td>Upper airway obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001363<a name=\"hpo-HP.580001363\"> </a></td><td>Craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000204<a name=\"hpo-HP.580000204\"> </a></td><td>Cleft upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001738<a name=\"hpo-HP.580001738\"> </a></td><td>Exocrine pancreatic insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002823<a name=\"hpo-HP.580002823\"> </a></td><td>Abnormality of femur morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000823<a name=\"hpo-HP.580000823\"> </a></td><td>Delayed puberty</td></tr><tr><td style=\"white-space:nowrap\">HP:0100279<a name=\"hpo-HP.580100279\"> </a></td><td>Ulcerative colitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003834<a name=\"hpo-HP.580003834\"> </a></td><td>Shoulder dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001065<a name=\"hpo-HP.580001065\"> </a></td><td>Striae distensae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000448<a name=\"hpo-HP.580000448\"> </a></td><td>Prominent nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0000554<a name=\"hpo-HP.580000554\"> </a></td><td>Uveitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001006<a name=\"hpo-HP.580001006\"> </a></td><td>obsolete Hypotrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000501<a name=\"hpo-HP.580000501\"> </a></td><td>Glaucoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000262<a name=\"hpo-HP.580000262\"> </a></td><td>Turricephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000729<a name=\"hpo-HP.580000729\"> </a></td><td>Autistic behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0010800<a name=\"hpo-HP.580010800\"> </a></td><td>Absent cupid's bow</td></tr><tr><td style=\"white-space:nowrap\">HP:0010808<a name=\"hpo-HP.580010808\"> </a></td><td>Protruding tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0009927<a name=\"hpo-HP.580009927\"> </a></td><td>Aplasia of the nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0100539<a name=\"hpo-HP.580100539\"> </a></td><td>Periorbital edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000629<a name=\"hpo-HP.580000629\"> </a></td><td>Periorbital fullness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000178<a name=\"hpo-HP.580000178\"> </a></td><td>Abnormality of lower lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000168<a name=\"hpo-HP.580000168\"> </a></td><td>Abnormality of the gingiva</td></tr><tr><td style=\"white-space:nowrap\">HP:0001022<a name=\"hpo-HP.580001022\"> </a></td><td>Albinism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000177<a name=\"hpo-HP.580000177\"> </a></td><td>Abnormality of upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001337<a name=\"hpo-HP.580001337\"> </a></td><td>Tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002135<a name=\"hpo-HP.580002135\"> </a></td><td>Basal ganglia calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0002352<a name=\"hpo-HP.580002352\"> </a></td><td>Leukoencephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002514<a name=\"hpo-HP.580002514\"> </a></td><td>Cerebral calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0010576<a name=\"hpo-HP.580010576\"> </a></td><td>Intracranial cystic lesion</td></tr><tr><td style=\"white-space:nowrap\">HP:0001622<a name=\"hpo-HP.580001622\"> </a></td><td>Premature birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002415<a name=\"hpo-HP.580002415\"> </a></td><td>Leukodystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001320<a name=\"hpo-HP.580001320\"> </a></td><td>Cerebellar vermis hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001773<a name=\"hpo-HP.580001773\"> </a></td><td>Short foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0002750<a name=\"hpo-HP.580002750\"> </a></td><td>Delayed skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004415<a name=\"hpo-HP.580004415\"> </a></td><td>Pulmonary artery stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012741<a name=\"hpo-HP.580012741\"> </a></td><td>Unilateral cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000036<a name=\"hpo-HP.580000036\"> </a></td><td>Abnormality of the penis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002408<a name=\"hpo-HP.580002408\"> </a></td><td>Cerebral arteriovenous malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0007457<a name=\"hpo-HP.580007457\"> </a></td><td>Prominent veins on trunk</td></tr><tr><td style=\"white-space:nowrap\">HP:0000378<a name=\"hpo-HP.580000378\"> </a></td><td>Cupped ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000396<a name=\"hpo-HP.580000396\"> </a></td><td>Overfolded helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000035<a name=\"hpo-HP.580000035\"> </a></td><td>Abnormal testis morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009895<a name=\"hpo-HP.580009895\"> </a></td><td>Abnormality of the crus of the helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000034<a name=\"hpo-HP.580000034\"> </a></td><td>Hydrocele testis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000722<a name=\"hpo-HP.580000722\"> </a></td><td>Obsessive-compulsive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000845<a name=\"hpo-HP.580000845\"> </a></td><td>Growth hormone excess</td></tr><tr><td style=\"white-space:nowrap\">HP:0100829<a name=\"hpo-HP.580100829\"> </a></td><td>Galactorrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001578<a name=\"hpo-HP.580001578\"> </a></td><td>Increased circulating cortisol level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000786<a name=\"hpo-HP.580000786\"> </a></td><td>Primary amenorrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001701<a name=\"hpo-HP.580001701\"> </a></td><td>Pericarditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002076<a name=\"hpo-HP.580002076\"> </a></td><td>Migraine</td></tr><tr><td style=\"white-space:nowrap\">HP:0004755<a name=\"hpo-HP.580004755\"> </a></td><td>Supraventricular tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010522<a name=\"hpo-HP.580010522\"> </a></td><td>Dyslexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004313<a name=\"hpo-HP.580004313\"> </a></td><td>Decreased circulating antibody level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000011<a name=\"hpo-HP.580000011\"> </a></td><td>Neurogenic bladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000641<a name=\"hpo-HP.580000641\"> </a></td><td>Dysmetric saccades</td></tr><tr><td style=\"white-space:nowrap\">HP:0007772<a name=\"hpo-HP.580007772\"> </a></td><td>Impaired smooth pursuit</td></tr><tr><td style=\"white-space:nowrap\">HP:0001583<a name=\"hpo-HP.580001583\"> </a></td><td>Rotary nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010544<a name=\"hpo-HP.580010544\"> </a></td><td>Vertical nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012735<a name=\"hpo-HP.580012735\"> </a></td><td>Cough</td></tr><tr><td style=\"white-space:nowrap\">HP:0002075<a name=\"hpo-HP.580002075\"> </a></td><td>Dysdiadochokinesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0007256<a name=\"hpo-HP.580007256\"> </a></td><td>Abnormal pyramidal sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0001257<a name=\"hpo-HP.580001257\"> </a></td><td>Spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002321<a name=\"hpo-HP.580002321\"> </a></td><td>Vertigo</td></tr><tr><td style=\"white-space:nowrap\">HP:0002384<a name=\"hpo-HP.580002384\"> </a></td><td>Focal impaired awareness seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011376<a name=\"hpo-HP.580011376\"> </a></td><td>Morphological abnormality of the vestibule of the inner ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0002326<a name=\"hpo-HP.580002326\"> </a></td><td>Transient ischemic attack</td></tr><tr><td style=\"white-space:nowrap\">HP:0005584<a name=\"hpo-HP.580005584\"> </a></td><td>Renal cell carcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0003124<a name=\"hpo-HP.580003124\"> </a></td><td>Hypercholesterolemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003002<a name=\"hpo-HP.580003002\"> </a></td><td>Breast carcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0004953<a name=\"hpo-HP.580004953\"> </a></td><td>obsolete Dilatation of abdominal aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0004944<a name=\"hpo-HP.580004944\"> </a></td><td>Dilatation of the cerebral artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0000100<a name=\"hpo-HP.580000100\"> </a></td><td>Nephrotic syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002783<a name=\"hpo-HP.580002783\"> </a></td><td>Recurrent lower respiratory tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0003470<a name=\"hpo-HP.580003470\"> </a></td><td>Paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006597<a name=\"hpo-HP.580006597\"> </a></td><td>Diaphragmatic paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008151<a name=\"hpo-HP.580008151\"> </a></td><td>Prolonged prothrombin time</td></tr><tr><td style=\"white-space:nowrap\">HP:0010628<a name=\"hpo-HP.580010628\"> </a></td><td>Facial palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011892<a name=\"hpo-HP.580011892\"> </a></td><td>Low levels of vitamin K</td></tr><tr><td style=\"white-space:nowrap\">HP:0001075<a name=\"hpo-HP.580001075\"> </a></td><td>Atrophic scars</td></tr><tr><td style=\"white-space:nowrap\">HP:0001816<a name=\"hpo-HP.580001816\"> </a></td><td>Thin nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002216<a name=\"hpo-HP.580002216\"> </a></td><td>Premature graying of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0003401<a name=\"hpo-HP.580003401\"> </a></td><td>Paresthesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100134<a name=\"hpo-HP.580100134\"> </a></td><td>Abnormality of the axillary hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0100797<a name=\"hpo-HP.580100797\"> </a></td><td>Toenail dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010461<a name=\"hpo-HP.580010461\"> </a></td><td>Abnormality of the male genitalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000044<a name=\"hpo-HP.580000044\"> </a></td><td>Hypogonadotropic hypogonadism</td></tr><tr><td style=\"white-space:nowrap\">HP:0100568<a name=\"hpo-HP.580100568\"> </a></td><td>Neoplasm of the endocrine system</td></tr><tr><td style=\"white-space:nowrap\">HP:0001646<a name=\"hpo-HP.580001646\"> </a></td><td>Abnormal aortic valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000813<a name=\"hpo-HP.580000813\"> </a></td><td>Bicornuate uterus</td></tr><tr><td style=\"white-space:nowrap\">HP:0004380<a name=\"hpo-HP.580004380\"> </a></td><td>Aortic valve calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0001650<a name=\"hpo-HP.580001650\"> </a></td><td>Aortic valve stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000073<a name=\"hpo-HP.580000073\"> </a></td><td>Ureteral duplication</td></tr><tr><td style=\"white-space:nowrap\">HP:0100651<a name=\"hpo-HP.580100651\"> </a></td><td>Type I diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000819<a name=\"hpo-HP.580000819\"> </a></td><td>Diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000573<a name=\"hpo-HP.580000573\"> </a></td><td>Retinal hemorrhage</td></tr><tr><td style=\"white-space:nowrap\">HP:0005264<a name=\"hpo-HP.580005264\"> </a></td><td>Abnormality of the gallbladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000475<a name=\"hpo-HP.580000475\"> </a></td><td>Broad neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000089<a name=\"hpo-HP.580000089\"> </a></td><td>Renal hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000921<a name=\"hpo-HP.580000921\"> </a></td><td>Missing ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0001789<a name=\"hpo-HP.580001789\"> </a></td><td>Hydrops fetalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002089<a name=\"hpo-HP.580002089\"> </a></td><td>Pulmonary hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003422<a name=\"hpo-HP.580003422\"> </a></td><td>Vertebral segmentation defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002323<a name=\"hpo-HP.580002323\"> </a></td><td>Anencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000341<a name=\"hpo-HP.580000341\"> </a></td><td>Narrow forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0002869<a name=\"hpo-HP.580002869\"> </a></td><td>Flared iliac wings</td></tr><tr><td style=\"white-space:nowrap\">HP:0003100<a name=\"hpo-HP.580003100\"> </a></td><td>Slender long bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0003275<a name=\"hpo-HP.580003275\"> </a></td><td>Narrow pelvis bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0009891<a name=\"hpo-HP.580009891\"> </a></td><td>Underdeveloped supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0011039<a name=\"hpo-HP.580011039\"> </a></td><td>Abnormality of the helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0008572<a name=\"hpo-HP.580008572\"> </a></td><td>External ear malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0009738<a name=\"hpo-HP.580009738\"> </a></td><td>Abnormality of the antihelix</td></tr><tr><td style=\"white-space:nowrap\">HP:0011328<a name=\"hpo-HP.580011328\"> </a></td><td>Abnormality of fontanelles</td></tr><tr><td style=\"white-space:nowrap\">HP:0012155<a name=\"hpo-HP.580012155\"> </a></td><td>Decreased corneal sensation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004602<a name=\"hpo-HP.580004602\"> </a></td><td>Cervical C2/C3 vertebral fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002997<a name=\"hpo-HP.580002997\"> </a></td><td>Abnormality of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0009777<a name=\"hpo-HP.580009777\"> </a></td><td>Absent thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002893<a name=\"hpo-HP.580002893\"> </a></td><td>Pituitary adenoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0040278<a name=\"hpo-HP.580040278\"> </a></td><td>Prolactinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001555<a name=\"hpo-HP.580001555\"> </a></td><td>Asymmetry of the thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0000902<a name=\"hpo-HP.580000902\"> </a></td><td>Rib fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002164<a name=\"hpo-HP.580002164\"> </a></td><td>Nail dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011314<a name=\"hpo-HP.580011314\"> </a></td><td>Abnormality of long bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002867<a name=\"hpo-HP.580002867\"> </a></td><td>Abnormality of the ilium</td></tr><tr><td style=\"white-space:nowrap\">HP:0000774<a name=\"hpo-HP.580000774\"> </a></td><td>Narrow chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0006482<a name=\"hpo-HP.580006482\"> </a></td><td>Abnormality of dental morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0004383<a name=\"hpo-HP.580004383\"> </a></td><td>Hypoplastic left heart</td></tr><tr><td style=\"white-space:nowrap\">HP:0002015<a name=\"hpo-HP.580002015\"> </a></td><td>Dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0500093<a name=\"hpo-HP.580500093\"> </a></td><td>Food allergy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001519<a name=\"hpo-HP.580001519\"> </a></td><td>Disproportionate tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0003179<a name=\"hpo-HP.580003179\"> </a></td><td>Protrusio acetabuli</td></tr><tr><td style=\"white-space:nowrap\">HP:0007385<a name=\"hpo-HP.580007385\"> </a></td><td>Aplasia cutis congenita of scalp</td></tr><tr><td style=\"white-space:nowrap\">HP:0000716<a name=\"hpo-HP.580000716\"> </a></td><td>Depressivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0012583<a name=\"hpo-HP.580012583\"> </a></td><td>Unilateral renal hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000618<a name=\"hpo-HP.580000618\"> </a></td><td>Blindness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001004<a name=\"hpo-HP.580001004\"> </a></td><td>Lymphedema</td></tr><tr><td style=\"white-space:nowrap\">HP:0002652<a name=\"hpo-HP.580002652\"> </a></td><td>Skeletal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012520<a name=\"hpo-HP.580012520\"> </a></td><td>Perivascular spaces</td></tr><tr><td style=\"white-space:nowrap\">HP:0005293<a name=\"hpo-HP.580005293\"> </a></td><td>Venous insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0012432<a name=\"hpo-HP.580012432\"> </a></td><td>Chronic fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002578<a name=\"hpo-HP.580002578\"> </a></td><td>Gastroparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001658<a name=\"hpo-HP.580001658\"> </a></td><td>Myocardial infarction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001802<a name=\"hpo-HP.580001802\"> </a></td><td>Absent toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0001821<a name=\"hpo-HP.580001821\"> </a></td><td>Broad nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0000807<a name=\"hpo-HP.580000807\"> </a></td><td>Glandular hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0100582<a name=\"hpo-HP.580100582\"> </a></td><td>Nasal polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002653<a name=\"hpo-HP.580002653\"> </a></td><td>Bone pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0001073<a name=\"hpo-HP.580001073\"> </a></td><td>Cigarette-paper scars</td></tr><tr><td style=\"white-space:nowrap\">HP:0031913<a name=\"hpo-HP.580031913\"> </a></td><td>Rhombencephalosynapsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002617<a name=\"hpo-HP.580002617\"> </a></td><td>Dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005107<a name=\"hpo-HP.580005107\"> </a></td><td>Abnormal sacrum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002025<a name=\"hpo-HP.580002025\"> </a></td><td>Anal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0009099<a name=\"hpo-HP.580009099\"> </a></td><td>Median cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0003212<a name=\"hpo-HP.580003212\"> </a></td><td>Increased circulating IgE level</td></tr><tr><td style=\"white-space:nowrap\">HP:0001319<a name=\"hpo-HP.580001319\"> </a></td><td>Neonatal hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002659<a name=\"hpo-HP.580002659\"> </a></td><td>Increased susceptibility to fractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0025246<a name=\"hpo-HP.580025246\"> </a></td><td>Trichilemmal cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0002107<a name=\"hpo-HP.580002107\"> </a></td><td>Pneumothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0000107<a name=\"hpo-HP.580000107\"> </a></td><td>Renal cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0001025<a name=\"hpo-HP.580001025\"> </a></td><td>Urticaria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002204<a name=\"hpo-HP.580002204\"> </a></td><td>Pulmonary embolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001058<a name=\"hpo-HP.580001058\"> </a></td><td>Poor wound healing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003010<a name=\"hpo-HP.580003010\"> </a></td><td>Prolonged bleeding time</td></tr><tr><td style=\"white-space:nowrap\">HP:0100502<a name=\"hpo-HP.580100502\"> </a></td><td>Vitamin B12 deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0100510<a name=\"hpo-HP.580100510\"> </a></td><td>Low levels of vitamin C</td></tr><tr><td style=\"white-space:nowrap\">HP:0030976<a name=\"hpo-HP.580030976\"> </a></td><td>Abnormal factor VIII activity</td></tr><tr><td style=\"white-space:nowrap\">HP:0100789<a name=\"hpo-HP.580100789\"> </a></td><td>Torus palatinus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000108<a name=\"hpo-HP.580000108\"> </a></td><td>Renal corticomedullary cysts</td></tr><tr><td style=\"white-space:nowrap\">HP:0000072<a name=\"hpo-HP.580000072\"> </a></td><td>Hydroureter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000019<a name=\"hpo-HP.580000019\"> </a></td><td>Urinary hesitancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100771<a name=\"hpo-HP.580100771\"> </a></td><td>Hypoperistalsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000021<a name=\"hpo-HP.580000021\"> </a></td><td>Megacystis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004388<a name=\"hpo-HP.580004388\"> </a></td><td>Microcolon</td></tr><tr><td style=\"white-space:nowrap\">HP:0005247<a name=\"hpo-HP.580005247\"> </a></td><td>Hypoplasia of the abdominal wall musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0004794<a name=\"hpo-HP.580004794\"> </a></td><td>Malrotation of small bowel</td></tr><tr><td style=\"white-space:nowrap\">HP:0000045<a name=\"hpo-HP.580000045\"> </a></td><td>Abnormality of the scrotum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002236<a name=\"hpo-HP.580002236\"> </a></td><td>Frontal upsweep of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000212<a name=\"hpo-HP.580000212\"> </a></td><td>Gingival overgrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001808<a name=\"hpo-HP.580001808\"> </a></td><td>Fragile nails</td></tr><tr><td style=\"white-space:nowrap\">HP:0000225<a name=\"hpo-HP.580000225\"> </a></td><td>Gingival bleeding</td></tr><tr><td style=\"white-space:nowrap\">HP:0006009<a name=\"hpo-HP.580006009\"> </a></td><td>Broad phalanx</td></tr><tr><td style=\"white-space:nowrap\">HP:0001837<a name=\"hpo-HP.580001837\"> </a></td><td>Broad toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001946<a name=\"hpo-HP.580001946\"> </a></td><td>Ketosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002490<a name=\"hpo-HP.580002490\"> </a></td><td>Increased CSF lactate</td></tr><tr><td style=\"white-space:nowrap\">HP:0002922<a name=\"hpo-HP.580002922\"> </a></td><td>Increased CSF protein</td></tr><tr><td style=\"white-space:nowrap\">HP:0003128<a name=\"hpo-HP.580003128\"> </a></td><td>Lactic acidosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003111<a name=\"hpo-HP.580003111\"> </a></td><td>Abnormal blood ion concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0032234<a name=\"hpo-HP.580032234\"> </a></td><td>Increased circulating creatine kinase MM isoform</td></tr><tr><td style=\"white-space:nowrap\">HP:0003348<a name=\"hpo-HP.580003348\"> </a></td><td>Hyperalaninemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008347<a name=\"hpo-HP.580008347\"> </a></td><td>Decreased activity of mitochondrial complex IV</td></tr><tr><td style=\"white-space:nowrap\">HP:0000326<a name=\"hpo-HP.580000326\"> </a></td><td>Abnormality of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0010758<a name=\"hpo-HP.580010758\"> </a></td><td>Abnormality of the premaxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0005681<a name=\"hpo-HP.580005681\"> </a></td><td>Juvenile rheumatoid arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000514<a name=\"hpo-HP.580000514\"> </a></td><td>Slow saccadic eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0002788<a name=\"hpo-HP.580002788\"> </a></td><td>Recurrent upper respiratory tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0003396<a name=\"hpo-HP.580003396\"> </a></td><td>Syringomyelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003011<a name=\"hpo-HP.580003011\"> </a></td><td>Abnormality of the musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0002098<a name=\"hpo-HP.580002098\"> </a></td><td>Respiratory distress</td></tr><tr><td style=\"white-space:nowrap\">HP:0002018<a name=\"hpo-HP.580002018\"> </a></td><td>Nausea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002014<a name=\"hpo-HP.580002014\"> </a></td><td>Diarrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0025168<a name=\"hpo-HP.580025168\"> </a></td><td>Left ventricular diastolic dysfunction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001679<a name=\"hpo-HP.580001679\"> </a></td><td>Abnormal aortic morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000159<a name=\"hpo-HP.580000159\"> </a></td><td>Abnormal lip morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011338<a name=\"hpo-HP.580011338\"> </a></td><td>Abnormality of mouth shape</td></tr><tr><td style=\"white-space:nowrap\">HP:0000478<a name=\"hpo-HP.580000478\"> </a></td><td>Abnormality of the eye</td></tr><tr><td style=\"white-space:nowrap\">HP:0000154<a name=\"hpo-HP.580000154\"> </a></td><td>Wide mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001513<a name=\"hpo-HP.580001513\"> </a></td><td>Obesity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002475<a name=\"hpo-HP.580002475\"> </a></td><td>Myelomeningocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0003765<a name=\"hpo-HP.580003765\"> </a></td><td>Psoriasiform dermatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010289<a name=\"hpo-HP.580010289\"> </a></td><td>Cleft of alveolar ridge of maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0003908<a name=\"hpo-HP.580003908\"> </a></td><td>Corner fracture of metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002190<a name=\"hpo-HP.580002190\"> </a></td><td>Choroid plexus cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0004370<a name=\"hpo-HP.580004370\"> </a></td><td>Abnormality of temperature regulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011611<a name=\"hpo-HP.580011611\"> </a></td><td>Interrupted aortic arch</td></tr><tr><td style=\"white-space:nowrap\">HP:0000737<a name=\"hpo-HP.580000737\"> </a></td><td>Irritability</td></tr><tr><td style=\"white-space:nowrap\">HP:0001344<a name=\"hpo-HP.580001344\"> </a></td><td>Absent speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0002376<a name=\"hpo-HP.580002376\"> </a></td><td>Developmental regression</td></tr><tr><td style=\"white-space:nowrap\">HP:0002140<a name=\"hpo-HP.580002140\"> </a></td><td>Ischemic stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0001287<a name=\"hpo-HP.580001287\"> </a></td><td>Meningitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002721<a name=\"hpo-HP.580002721\"> </a></td><td>Immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000041<a name=\"hpo-HP.580000041\"> </a></td><td>Chordee</td></tr><tr><td style=\"white-space:nowrap\">HP:0012854<a name=\"hpo-HP.580012854\"> </a></td><td>Midshaft hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0000808<a name=\"hpo-HP.580000808\"> </a></td><td>Penoscrotal hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0000048<a name=\"hpo-HP.580000048\"> </a></td><td>Bifid scrotum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001047<a name=\"hpo-HP.580001047\"> </a></td><td>Atopic dermatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001621<a name=\"hpo-HP.580001621\"> </a></td><td>Weak voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0002372<a name=\"hpo-HP.580002372\"> </a></td><td>Normal interictal EEG</td></tr><tr><td style=\"white-space:nowrap\">HP:0012803<a name=\"hpo-HP.580012803\"> </a></td><td>Anisometropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011386<a name=\"hpo-HP.580011386\"> </a></td><td>Narrow internal auditory canal</td></tr><tr><td style=\"white-space:nowrap\">HP:0012714<a name=\"hpo-HP.580012714\"> </a></td><td>Severe hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0006485<a name=\"hpo-HP.580006485\"> </a></td><td>Agenesis of incisor</td></tr><tr><td style=\"white-space:nowrap\">HP:0000787<a name=\"hpo-HP.580000787\"> </a></td><td>Nephrolithiasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011332<a name=\"hpo-HP.580011332\"> </a></td><td>Hemifacial hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001909<a name=\"hpo-HP.580001909\"> </a></td><td>Leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004808<a name=\"hpo-HP.580004808\"> </a></td><td>Acute myeloid leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006495<a name=\"hpo-HP.580006495\"> </a></td><td>Aplasia/Hypoplasia of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0001180<a name=\"hpo-HP.580001180\"> </a></td><td>Hand oligodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002991<a name=\"hpo-HP.580002991\"> </a></td><td>Abnormality of fibula morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001849<a name=\"hpo-HP.580001849\"> </a></td><td>Foot oligodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0006507<a name=\"hpo-HP.580006507\"> </a></td><td>Aplasia/hypoplasia of the humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0005613<a name=\"hpo-HP.580005613\"> </a></td><td>Aplasia/hypoplasia of the femur</td></tr><tr><td style=\"white-space:nowrap\">HP:0006492<a name=\"hpo-HP.580006492\"> </a></td><td>Aplasia/Hypoplasia of the fibula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000098<a name=\"hpo-HP.580000098\"> </a></td><td>Tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0003311<a name=\"hpo-HP.580003311\"> </a></td><td>Hypoplasia of the odontoid process</td></tr><tr><td style=\"white-space:nowrap\">HP:0005752<a name=\"hpo-HP.580005752\"> </a></td><td>Flattened moderately deformed vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0030039<a name=\"hpo-HP.580030039\"> </a></td><td>Fused thoracic vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0003304<a name=\"hpo-HP.580003304\"> </a></td><td>Spondylolysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001659<a name=\"hpo-HP.580001659\"> </a></td><td>Aortic regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002984<a name=\"hpo-HP.580002984\"> </a></td><td>Hypoplasia of the radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0009944<a name=\"hpo-HP.580009944\"> </a></td><td>Partial duplication of thumb phalanx</td></tr><tr><td style=\"white-space:nowrap\">HP:0005819<a name=\"hpo-HP.580005819\"> </a></td><td>Short middle phalanx of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0002110<a name=\"hpo-HP.580002110\"> </a></td><td>Bronchiectasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001677<a name=\"hpo-HP.580001677\"> </a></td><td>Coronary artery atherosclerosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001737<a name=\"hpo-HP.580001737\"> </a></td><td>Pancreatic cysts</td></tr><tr><td style=\"white-space:nowrap\">HP:0005113<a name=\"hpo-HP.580005113\"> </a></td><td>Aortic arch aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003022<a name=\"hpo-HP.580003022\"> </a></td><td>Hypoplasia of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0002205<a name=\"hpo-HP.580002205\"> </a></td><td>Recurrent respiratory infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0001669<a name=\"hpo-HP.580001669\"> </a></td><td>Transposition of the great arteries</td></tr><tr><td style=\"white-space:nowrap\">HP:0001716<a name=\"hpo-HP.580001716\"> </a></td><td>Wolff-Parkinson-White syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002758<a name=\"hpo-HP.580002758\"> </a></td><td>Osteoarthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002037<a name=\"hpo-HP.580002037\"> </a></td><td>Inflammation of the large intestine</td></tr><tr><td style=\"white-space:nowrap\">HP:0009892<a name=\"hpo-HP.580009892\"> </a></td><td>Anotia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011331<a name=\"hpo-HP.580011331\"> </a></td><td>Hemifacial atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0009118<a name=\"hpo-HP.580009118\"> </a></td><td>Aplasia/Hypoplasia of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0009940<a name=\"hpo-HP.580009940\"> </a></td><td>Asymmetry of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000682<a name=\"hpo-HP.580000682\"> </a></td><td>Abnormality of dental enamel</td></tr><tr><td style=\"white-space:nowrap\">HP:0009908<a name=\"hpo-HP.580009908\"> </a></td><td>Anterior creases of earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001541<a name=\"hpo-HP.580001541\"> </a></td><td>Ascites</td></tr><tr><td style=\"white-space:nowrap\">HP:0006687<a name=\"hpo-HP.580006687\"> </a></td><td>Aortic tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0010535<a name=\"hpo-HP.580010535\"> </a></td><td>Sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0100633<a name=\"hpo-HP.580100633\"> </a></td><td>Esophagitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002105<a name=\"hpo-HP.580002105\"> </a></td><td>Hemoptysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002613<a name=\"hpo-HP.580002613\"> </a></td><td>Biliary cirrhosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004469<a name=\"hpo-HP.580004469\"> </a></td><td>Chronic bronchitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002720<a name=\"hpo-HP.580002720\"> </a></td><td>Decreased circulating IgA level</td></tr><tr><td style=\"white-space:nowrap\">HP:0002904<a name=\"hpo-HP.580002904\"> </a></td><td>Hyperbilirubinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003237<a name=\"hpo-HP.580003237\"> </a></td><td>Increased circulating IgG level</td></tr><tr><td style=\"white-space:nowrap\">HP:0003262<a name=\"hpo-HP.580003262\"> </a></td><td>Smooth muscle antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0011227<a name=\"hpo-HP.580011227\"> </a></td><td>Elevated C-reactive protein level</td></tr><tr><td style=\"white-space:nowrap\">HP:0001852<a name=\"hpo-HP.580001852\"> </a></td><td>Sandal gap</td></tr><tr><td style=\"white-space:nowrap\">HP:0004381<a name=\"hpo-HP.580004381\"> </a></td><td>Supravalvular aortic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100700<a name=\"hpo-HP.580100700\"> </a></td><td>Abnormal arachnoid mater morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002624<a name=\"hpo-HP.580002624\"> </a></td><td>Abnormal venous morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002289<a name=\"hpo-HP.580002289\"> </a></td><td>Alopecia universalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0009588<a name=\"hpo-HP.580009588\"> </a></td><td>Vestibular Schwannoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001648<a name=\"hpo-HP.580001648\"> </a></td><td>Cor pulmonale</td></tr><tr><td style=\"white-space:nowrap\">HP:0002091<a name=\"hpo-HP.580002091\"> </a></td><td>Restrictive ventilatory defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002092<a name=\"hpo-HP.580002092\"> </a></td><td>Pulmonary arterial hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0002113<a name=\"hpo-HP.580002113\"> </a></td><td>Pulmonary infiltrates</td></tr><tr><td style=\"white-space:nowrap\">HP:0003138<a name=\"hpo-HP.580003138\"> </a></td><td>Increased blood urea nitrogen</td></tr><tr><td style=\"white-space:nowrap\">HP:0003259<a name=\"hpo-HP.580003259\"> </a></td><td>Elevated serum creatinine</td></tr><tr><td style=\"white-space:nowrap\">HP:0005180<a name=\"hpo-HP.580005180\"> </a></td><td>Tricuspid regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0012585<a name=\"hpo-HP.580012585\"> </a></td><td>Renal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005133<a name=\"hpo-HP.580005133\"> </a></td><td>Right ventricular dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005575<a name=\"hpo-HP.580005575\"> </a></td><td>Hemolytic-uremic syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0001697<a name=\"hpo-HP.580001697\"> </a></td><td>Abnormal pericardium morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012486<a name=\"hpo-HP.580012486\"> </a></td><td>Myelitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002385<a name=\"hpo-HP.580002385\"> </a></td><td>Paraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006706<a name=\"hpo-HP.580006706\"> </a></td><td>Cystic liver disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0010880<a name=\"hpo-HP.580010880\"> </a></td><td>Increased nuchal translucency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000457<a name=\"hpo-HP.580000457\"> </a></td><td>Depressed nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0002263<a name=\"hpo-HP.580002263\"> </a></td><td>Exaggerated cupid's bow</td></tr><tr><td style=\"white-space:nowrap\">HP:0002500<a name=\"hpo-HP.580002500\"> </a></td><td>Abnormality of the cerebral white matter</td></tr><tr><td style=\"white-space:nowrap\">HP:0002835<a name=\"hpo-HP.580002835\"> </a></td><td>Aspiration</td></tr><tr><td style=\"white-space:nowrap\">HP:0000600<a name=\"hpo-HP.580000600\"> </a></td><td>Abnormality of the pharynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0004327<a name=\"hpo-HP.580004327\"> </a></td><td>Abnormal vitreous humor morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0004378<a name=\"hpo-HP.580004378\"> </a></td><td>Abnormality of the anus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012374<a name=\"hpo-HP.580012374\"> </a></td><td>obsolete Abnormal globe morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100768<a name=\"hpo-HP.580100768\"> </a></td><td>Choriocarcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0030991<a name=\"hpo-HP.580030991\"> </a></td><td>Sclerosing cholangitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006510<a name=\"hpo-HP.580006510\"> </a></td><td>Chronic pulmonary obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0000710<a name=\"hpo-HP.580000710\"> </a></td><td>Hyperorality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001270<a name=\"hpo-HP.580001270\"> </a></td><td>Motor delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0001548<a name=\"hpo-HP.580001548\"> </a></td><td>Overgrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002311<a name=\"hpo-HP.580002311\"> </a></td><td>Incoordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0006288<a name=\"hpo-HP.580006288\"> </a></td><td>Advanced eruption of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0006323<a name=\"hpo-HP.580006323\"> </a></td><td>Premature loss of primary teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009890<a name=\"hpo-HP.580009890\"> </a></td><td>High anterior hairline</td></tr><tr><td style=\"white-space:nowrap\">HP:0100034<a name=\"hpo-HP.580100034\"> </a></td><td>Motor tics</td></tr><tr><td style=\"white-space:nowrap\">HP:0100035<a name=\"hpo-HP.580100035\"> </a></td><td>Phonic tics</td></tr><tr><td style=\"white-space:nowrap\">HP:0000348<a name=\"hpo-HP.580000348\"> </a></td><td>High forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0001520<a name=\"hpo-HP.580001520\"> </a></td><td>Large for gestational age</td></tr><tr><td style=\"white-space:nowrap\">HP:0001239<a name=\"hpo-HP.580001239\"> </a></td><td>Wrist flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0007359<a name=\"hpo-HP.580007359\"> </a></td><td>Focal-onset seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000430<a name=\"hpo-HP.580000430\"> </a></td><td>Underdeveloped nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0007400<a name=\"hpo-HP.580007400\"> </a></td><td>Irregular hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0100495<a name=\"hpo-HP.580100495\"> </a></td><td>Mastocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012378<a name=\"hpo-HP.580012378\"> </a></td><td>Fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002046<a name=\"hpo-HP.580002046\"> </a></td><td>Heat intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0003270<a name=\"hpo-HP.580003270\"> </a></td><td>Abdominal distention</td></tr><tr><td style=\"white-space:nowrap\">HP:0002180<a name=\"hpo-HP.580002180\"> </a></td><td>Neurodegeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0003493<a name=\"hpo-HP.580003493\"> </a></td><td>Antinuclear antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0030057<a name=\"hpo-HP.580030057\"> </a></td><td>Autoimmune antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0006802<a name=\"hpo-HP.580006802\"> </a></td><td>Abnormal anterior horn cell morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000064<a name=\"hpo-HP.580000064\"> </a></td><td>Hypoplastic labia minora</td></tr><tr><td style=\"white-space:nowrap\">HP:0000338<a name=\"hpo-HP.580000338\"> </a></td><td>Hypomimic face</td></tr><tr><td style=\"white-space:nowrap\">HP:0001642<a name=\"hpo-HP.580001642\"> </a></td><td>Pulmonic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011344<a name=\"hpo-HP.580011344\"> </a></td><td>Severe global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0200007<a name=\"hpo-HP.580200007\"> </a></td><td>Abnormal size of the palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0004464<a name=\"hpo-HP.580004464\"> </a></td><td>Postauricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0000130<a name=\"hpo-HP.580000130\"> </a></td><td>Abnormality of the uterus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000137<a name=\"hpo-HP.580000137\"> </a></td><td>Abnormality of the ovary</td></tr><tr><td style=\"white-space:nowrap\">HP:0000142<a name=\"hpo-HP.580000142\"> </a></td><td>Abnormal vagina morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000370<a name=\"hpo-HP.580000370\"> </a></td><td>Abnormality of the middle ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0011787<a name=\"hpo-HP.580011787\"> </a></td><td>Central hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000274<a name=\"hpo-HP.580000274\"> </a></td><td>Small face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000446<a name=\"hpo-HP.580000446\"> </a></td><td>Narrow nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000622<a name=\"hpo-HP.580000622\"> </a></td><td>Blurred vision</td></tr><tr><td style=\"white-space:nowrap\">HP:0001245<a name=\"hpo-HP.580001245\"> </a></td><td>Small thenar eminence</td></tr><tr><td style=\"white-space:nowrap\">HP:0009601<a name=\"hpo-HP.580009601\"> </a></td><td>Aplasia/Hypoplasia of the thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0011343<a name=\"hpo-HP.580011343\"> </a></td><td>Moderate global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0000419<a name=\"hpo-HP.580000419\"> </a></td><td>Abnormality of the nasal septum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000502<a name=\"hpo-HP.580000502\"> </a></td><td>Abnormal conjunctiva morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000591<a name=\"hpo-HP.580000591\"> </a></td><td>Abnormal sclera morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000615<a name=\"hpo-HP.580000615\"> </a></td><td>Abnormal pupil morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001163<a name=\"hpo-HP.580001163\"> </a></td><td>Abnormality of the metacarpal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0001832<a name=\"hpo-HP.580001832\"> </a></td><td>Abnormal metatarsal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001850<a name=\"hpo-HP.580001850\"> </a></td><td>Abnormality of the tarsal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0010490<a name=\"hpo-HP.580010490\"> </a></td><td>Abnormality of the palmar creases</td></tr><tr><td style=\"white-space:nowrap\">HP:0010881<a name=\"hpo-HP.580010881\"> </a></td><td>Abnormality of the umbilical cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0009113<a name=\"hpo-HP.580009113\"> </a></td><td>Diaphragmatic weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0011664<a name=\"hpo-HP.580011664\"> </a></td><td>Left ventricular noncompaction cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100240<a name=\"hpo-HP.580100240\"> </a></td><td>Synostosis of joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0001838<a name=\"hpo-HP.580001838\"> </a></td><td>Rocker bottom foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0003717<a name=\"hpo-HP.580003717\"> </a></td><td>Minimal subcutaneous fat</td></tr><tr><td style=\"white-space:nowrap\">HP:0001339<a name=\"hpo-HP.580001339\"> </a></td><td>Lissencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001591<a name=\"hpo-HP.580001591\"> </a></td><td>Bell-shaped thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0002655<a name=\"hpo-HP.580002655\"> </a></td><td>Spondyloepiphyseal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002983<a name=\"hpo-HP.580002983\"> </a></td><td>Micromelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003016<a name=\"hpo-HP.580003016\"> </a></td><td>Metaphyseal widening</td></tr><tr><td style=\"white-space:nowrap\">HP:0009826<a name=\"hpo-HP.580009826\"> </a></td><td>Limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0004488<a name=\"hpo-HP.580004488\"> </a></td><td>Macrocephaly at birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001695<a name=\"hpo-HP.580001695\"> </a></td><td>Cardiac arrest</td></tr><tr><td style=\"white-space:nowrap\">HP:0001712<a name=\"hpo-HP.580001712\"> </a></td><td>Left ventricular hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100775<a name=\"hpo-HP.580100775\"> </a></td><td>Dural ectasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000846<a name=\"hpo-HP.580000846\"> </a></td><td>Adrenal insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002925<a name=\"hpo-HP.580002925\"> </a></td><td>Increased thyroid-stimulating hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0100646<a name=\"hpo-HP.580100646\"> </a></td><td>Thyroiditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000836<a name=\"hpo-HP.580000836\"> </a></td><td>Hyperthyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0004414<a name=\"hpo-HP.580004414\"> </a></td><td>Abnormality of the pulmonary artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0000465<a name=\"hpo-HP.580000465\"> </a></td><td>Webbed neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000723<a name=\"hpo-HP.580000723\"> </a></td><td>Restrictive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0002253<a name=\"hpo-HP.580002253\"> </a></td><td>Colonic diverticula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001310<a name=\"hpo-HP.580001310\"> </a></td><td>Dysmetria</td></tr><tr><td style=\"white-space:nowrap\">HP:0000093<a name=\"hpo-HP.580000093\"> </a></td><td>Proteinuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002907<a name=\"hpo-HP.580002907\"> </a></td><td>Microscopic hematuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0003073<a name=\"hpo-HP.580003073\"> </a></td><td>Hypoalbuminemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004315<a name=\"hpo-HP.580004315\"> </a></td><td>Decreased circulating IgG level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000795<a name=\"hpo-HP.580000795\"> </a></td><td>Abnormality of the urethra</td></tr><tr><td style=\"white-space:nowrap\">HP:0001015<a name=\"hpo-HP.580001015\"> </a></td><td>Prominent superficial veins</td></tr><tr><td style=\"white-space:nowrap\">HP:0004691<a name=\"hpo-HP.580004691\"> </a></td><td>2-3 toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005328<a name=\"hpo-HP.580005328\"> </a></td><td>Progeroid facial appearance</td></tr><tr><td style=\"white-space:nowrap\">HP:0005487<a name=\"hpo-HP.580005487\"> </a></td><td>Prominent metopic ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0007552<a name=\"hpo-HP.580007552\"> </a></td><td>Abnormal subcutaneous fat tissue distribution</td></tr><tr><td style=\"white-space:nowrap\">HP:0100678<a name=\"hpo-HP.580100678\"> </a></td><td>Premature skin wrinkling</td></tr><tr><td style=\"white-space:nowrap\">HP:0031137<a name=\"hpo-HP.580031137\"> </a></td><td>Storage in hepatocytes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002521<a name=\"hpo-HP.580002521\"> </a></td><td>Hypsarrhythmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005390<a name=\"hpo-HP.580005390\"> </a></td><td>Recurrent opportunistic infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0002716<a name=\"hpo-HP.580002716\"> </a></td><td>Lymphadenopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005379<a name=\"hpo-HP.580005379\"> </a></td><td>obsolete Severe T lymphocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004432<a name=\"hpo-HP.580004432\"> </a></td><td>Agammaglobulinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006695<a name=\"hpo-HP.580006695\"> </a></td><td>Atrioventricular canal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0001733<a name=\"hpo-HP.580001733\"> </a></td><td>Pancreatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002350<a name=\"hpo-HP.580002350\"> </a></td><td>Cerebellar cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0012110<a name=\"hpo-HP.580012110\"> </a></td><td>Hypoplasia of the pons</td></tr><tr><td style=\"white-space:nowrap\">HP:0001948<a name=\"hpo-HP.580001948\"> </a></td><td>Alkalosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003113<a name=\"hpo-HP.580003113\"> </a></td><td>Hypochloremia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003155<a name=\"hpo-HP.580003155\"> </a></td><td>Elevated alkaline phosphatase</td></tr><tr><td style=\"white-space:nowrap\">HP:0003542<a name=\"hpo-HP.580003542\"> </a></td><td>Increased serum pyruvate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000421<a name=\"hpo-HP.580000421\"> </a></td><td>Epistaxis</td></tr><tr><td style=\"white-space:nowrap\">HP:0200136<a name=\"hpo-HP.580200136\"> </a></td><td>Oral-pharyngeal dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000805<a name=\"hpo-HP.580000805\"> </a></td><td>Enuresis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005616<a name=\"hpo-HP.580005616\"> </a></td><td>Accelerated skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002459<a name=\"hpo-HP.580002459\"> </a></td><td>obsolete Dysautonomia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007302<a name=\"hpo-HP.580007302\"> </a></td><td>Bipolar affective disorder</td></tr><tr><td style=\"white-space:nowrap\">HP:0100602<a name=\"hpo-HP.580100602\"> </a></td><td>Preeclampsia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100508<a name=\"hpo-HP.580100508\"> </a></td><td>Abnormality of vitamin metabolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001140<a name=\"hpo-HP.580001140\"> </a></td><td>Limbal dermoid</td></tr><tr><td style=\"white-space:nowrap\">HP:0000143<a name=\"hpo-HP.580000143\"> </a></td><td>Rectovaginal fistula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001746<a name=\"hpo-HP.580001746\"> </a></td><td>Asplenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012715<a name=\"hpo-HP.580012715\"> </a></td><td>Profound hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001748<a name=\"hpo-HP.580001748\"> </a></td><td>Polysplenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003072<a name=\"hpo-HP.580003072\"> </a></td><td>Hypercalcemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002905<a name=\"hpo-HP.580002905\"> </a></td><td>Hyperphosphatemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002901<a name=\"hpo-HP.580002901\"> </a></td><td>Hypocalcemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001367<a name=\"hpo-HP.580001367\"> </a></td><td>Abnormal joint morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0010562<a name=\"hpo-HP.580010562\"> </a></td><td>Keloids</td></tr><tr><td style=\"white-space:nowrap\">HP:0004430<a name=\"hpo-HP.580004430\"> </a></td><td>Severe combined immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000003<a name=\"hpo-HP.580000003\"> </a></td><td>Multicystic kidney dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010980<a name=\"hpo-HP.580010980\"> </a></td><td>Hyperlipoproteinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002155<a name=\"hpo-HP.580002155\"> </a></td><td>Hypertriglyceridemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000520<a name=\"hpo-HP.580000520\"> </a></td><td>Proptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000180<a name=\"hpo-HP.580000180\"> </a></td><td>Lobulated tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0005486<a name=\"hpo-HP.580005486\"> </a></td><td>Small fontanelle</td></tr><tr><td style=\"white-space:nowrap\">HP:0000891<a name=\"hpo-HP.580000891\"> </a></td><td>Cervical ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002557<a name=\"hpo-HP.580002557\"> </a></td><td>Hypoplastic nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0009112<a name=\"hpo-HP.580009112\"> </a></td><td>Aplasia of the left hemidiaphragm</td></tr><tr><td style=\"white-space:nowrap\">HP:0001719<a name=\"hpo-HP.580001719\"> </a></td><td>Double outlet right ventricle</td></tr><tr><td style=\"white-space:nowrap\">HP:0001682<a name=\"hpo-HP.580001682\"> </a></td><td>Subvalvular aortic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001667<a name=\"hpo-HP.580001667\"> </a></td><td>Right ventricular hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002101<a name=\"hpo-HP.580002101\"> </a></td><td>Abnormal lung lobation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002202<a name=\"hpo-HP.580002202\"> </a></td><td>Pleural effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002566<a name=\"hpo-HP.580002566\"> </a></td><td>Intestinal malrotation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004510<a name=\"hpo-HP.580004510\"> </a></td><td>Pancreatic islet-cell hyperplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001747<a name=\"hpo-HP.580001747\"> </a></td><td>Accessory spleen</td></tr><tr><td style=\"white-space:nowrap\">HP:0002181<a name=\"hpo-HP.580002181\"> </a></td><td>Cerebral edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000967<a name=\"hpo-HP.580000967\"> </a></td><td>Petechiae</td></tr><tr><td style=\"white-space:nowrap\">HP:0009702<a name=\"hpo-HP.580009702\"> </a></td><td>Carpal synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000927<a name=\"hpo-HP.580000927\"> </a></td><td>Abnormality of skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004348<a name=\"hpo-HP.580004348\"> </a></td><td>Abnormality of bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0003019<a name=\"hpo-HP.580003019\"> </a></td><td>Abnormality of the wrist</td></tr><tr><td style=\"white-space:nowrap\">HP:0003063<a name=\"hpo-HP.580003063\"> </a></td><td>Abnormality of the humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001059<a name=\"hpo-HP.580001059\"> </a></td><td>Pterygium</td></tr><tr><td style=\"white-space:nowrap\">HP:0001528<a name=\"hpo-HP.580001528\"> </a></td><td>Hemihypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011228<a name=\"hpo-HP.580011228\"> </a></td><td>Horizontal eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000766<a name=\"hpo-HP.580000766\"> </a></td><td>Abnormality of the sternum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001254<a name=\"hpo-HP.580001254\"> </a></td><td>Lethargy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002360<a name=\"hpo-HP.580002360\"> </a></td><td>Sleep disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0001063<a name=\"hpo-HP.580001063\"> </a></td><td>Acrocyanosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001769<a name=\"hpo-HP.580001769\"> </a></td><td>Broad foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0010280<a name=\"hpo-HP.580010280\"> </a></td><td>Stomatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001288<a name=\"hpo-HP.580001288\"> </a></td><td>Gait disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0008330<a name=\"hpo-HP.580008330\"> </a></td><td>Reduced von Willebrand factor activity</td></tr><tr><td style=\"white-space:nowrap\">HP:0001954<a name=\"hpo-HP.580001954\"> </a></td><td>Recurrent fever</td></tr><tr><td style=\"white-space:nowrap\">HP:0004311<a name=\"hpo-HP.580004311\"> </a></td><td>Abnormal macrophage morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012539<a name=\"hpo-HP.580012539\"> </a></td><td>Non-Hodgkin lymphoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0002074<a name=\"hpo-HP.580002074\"> </a></td><td>Increased neuronal autofluorescent lipopigment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002973<a name=\"hpo-HP.580002973\"> </a></td><td>Abnormality of the forearm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003203<a name=\"hpo-HP.580003203\"> </a></td><td>Impaired oxidative burst</td></tr><tr><td style=\"white-space:nowrap\">HP:0003027<a name=\"hpo-HP.580003027\"> </a></td><td>Mesomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002754<a name=\"hpo-HP.580002754\"> </a></td><td>Osteomyelitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004431<a name=\"hpo-HP.580004431\"> </a></td><td>Complement deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0001258<a name=\"hpo-HP.580001258\"> </a></td><td>Spastic paraplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012811<a name=\"hpo-HP.580012811\"> </a></td><td>Wide nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0011832<a name=\"hpo-HP.580011832\"> </a></td><td>Narrow nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000288<a name=\"hpo-HP.580000288\"> </a></td><td>Abnormality of the philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002357<a name=\"hpo-HP.580002357\"> </a></td><td>Dysphasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000871<a name=\"hpo-HP.580000871\"> </a></td><td>Panhypopituitarism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000233<a name=\"hpo-HP.580000233\"> </a></td><td>Thin vermilion border</td></tr><tr><td style=\"white-space:nowrap\">HP:0003281<a name=\"hpo-HP.580003281\"> </a></td><td>Increased serum ferritin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010752<a name=\"hpo-HP.580010752\"> </a></td><td>Cleft mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000437<a name=\"hpo-HP.580000437\"> </a></td><td>Depressed nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000453<a name=\"hpo-HP.580000453\"> </a></td><td>Choanal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000863<a name=\"hpo-HP.580000863\"> </a></td><td>Central diabetes insipidus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000058<a name=\"hpo-HP.580000058\"> </a></td><td>Abnormality of the labia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007418<a name=\"hpo-HP.580007418\"> </a></td><td>Alopecia totalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100765<a name=\"hpo-HP.580100765\"> </a></td><td>Abnormality of the tonsils</td></tr><tr><td style=\"white-space:nowrap\">HP:0100747<a name=\"hpo-HP.580100747\"> </a></td><td>Macrodactyly of toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002109<a name=\"hpo-HP.580002109\"> </a></td><td>obsolete Abnormality of the bronchi</td></tr><tr><td style=\"white-space:nowrap\">HP:0011950<a name=\"hpo-HP.580011950\"> </a></td><td>Bronchiolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002850<a name=\"hpo-HP.580002850\"> </a></td><td>Decreased circulating total IgM</td></tr><tr><td style=\"white-space:nowrap\">HP:0001395<a name=\"hpo-HP.580001395\"> </a></td><td>Hepatic fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010701<a name=\"hpo-HP.580010701\"> </a></td><td>Abnormal immunoglobulin level</td></tr><tr><td style=\"white-space:nowrap\">HP:0009928<a name=\"hpo-HP.580009928\"> </a></td><td>Thick nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0010807<a name=\"hpo-HP.580010807\"> </a></td><td>Open bite</td></tr><tr><td style=\"white-space:nowrap\">HP:0002126<a name=\"hpo-HP.580002126\"> </a></td><td>Polymicrogyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002900<a name=\"hpo-HP.580002900\"> </a></td><td>Hypokalemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000155<a name=\"hpo-HP.580000155\"> </a></td><td>Oral ulcer</td></tr><tr><td style=\"white-space:nowrap\">HP:0000135<a name=\"hpo-HP.580000135\"> </a></td><td>Hypogonadism</td></tr><tr><td style=\"white-space:nowrap\">HP:0100783<a name=\"hpo-HP.580100783\"> </a></td><td>Breast aplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000336<a name=\"hpo-HP.580000336\"> </a></td><td>Prominent supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0010557<a name=\"hpo-HP.580010557\"> </a></td><td>Overlapping fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0005100<a name=\"hpo-HP.580005100\"> </a></td><td>Premature birth following premature rupture of fetal membranes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002594<a name=\"hpo-HP.580002594\"> </a></td><td>Pancreatic hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010109<a name=\"hpo-HP.580010109\"> </a></td><td>Short hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0002334<a name=\"hpo-HP.580002334\"> </a></td><td>Abnormality of the cerebellar vermis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003326<a name=\"hpo-HP.580003326\"> </a></td><td>Myalgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001645<a name=\"hpo-HP.580001645\"> </a></td><td>Sudden cardiac death</td></tr><tr><td style=\"white-space:nowrap\">HP:0001612<a name=\"hpo-HP.580001612\"> </a></td><td>Weak cry</td></tr><tr><td style=\"white-space:nowrap\">HP:0001618<a name=\"hpo-HP.580001618\"> </a></td><td>Dysphonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001336<a name=\"hpo-HP.580001336\"> </a></td><td>Myoclonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001283<a name=\"hpo-HP.580001283\"> </a></td><td>Bulbar palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002080<a name=\"hpo-HP.580002080\"> </a></td><td>Intention tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002174<a name=\"hpo-HP.580002174\"> </a></td><td>Postural tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002064<a name=\"hpo-HP.580002064\"> </a></td><td>Spastic gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0009800<a name=\"hpo-HP.580009800\"> </a></td><td>Maternal diabetes</td></tr><tr><td style=\"white-space:nowrap\">HP:0001662<a name=\"hpo-HP.580001662\"> </a></td><td>Bradycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006595<a name=\"hpo-HP.580006595\"> </a></td><td>Scapulohumeral synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005815<a name=\"hpo-HP.580005815\"> </a></td><td>Supernumerary ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000307<a name=\"hpo-HP.580000307\"> </a></td><td>Pointed chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0012371<a name=\"hpo-HP.580012371\"> </a></td><td>Hyperplasia of midface</td></tr><tr><td style=\"white-space:nowrap\">HP:0002643<a name=\"hpo-HP.580002643\"> </a></td><td>Neonatal respiratory distress</td></tr><tr><td style=\"white-space:nowrap\">HP:0002093<a name=\"hpo-HP.580002093\"> </a></td><td>Respiratory insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0010310<a name=\"hpo-HP.580010310\"> </a></td><td>Chylothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0006376<a name=\"hpo-HP.580006376\"> </a></td><td>Limited elbow flexion</td></tr><tr><td style=\"white-space:nowrap\">HP:0006467<a name=\"hpo-HP.580006467\"> </a></td><td>Limited shoulder movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010505<a name=\"hpo-HP.580010505\"> </a></td><td>Limitation of movement at ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0010501<a name=\"hpo-HP.580010501\"> </a></td><td>Limitation of knee mobility</td></tr><tr><td style=\"white-space:nowrap\">HP:0009896<a name=\"hpo-HP.580009896\"> </a></td><td>Abnormality of the antitragus</td></tr><tr><td style=\"white-space:nowrap\">HP:0004404<a name=\"hpo-HP.580004404\"> </a></td><td>Abnormal nipple morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011957<a name=\"hpo-HP.580011957\"> </a></td><td>Abnormal pectoral muscle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000777<a name=\"hpo-HP.580000777\"> </a></td><td>Abnormality of the thymus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000418<a name=\"hpo-HP.580000418\"> </a></td><td>Narrow nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0001572<a name=\"hpo-HP.580001572\"> </a></td><td>Macrodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002967<a name=\"hpo-HP.580002967\"> </a></td><td>Cubitus valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000988<a name=\"hpo-HP.580000988\"> </a></td><td>Skin rash</td></tr><tr><td style=\"white-space:nowrap\">HP:0009733<a name=\"hpo-HP.580009733\"> </a></td><td>Glioma</td></tr><tr><td style=\"white-space:nowrap\">HP:0012452<a name=\"hpo-HP.580012452\"> </a></td><td>Restless legs</td></tr><tr><td style=\"white-space:nowrap\">HP:0100031<a name=\"hpo-HP.580100031\"> </a></td><td>Neoplasm of the thyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0030127<a name=\"hpo-HP.580030127\"> </a></td><td>Endometriosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000123<a name=\"hpo-HP.580000123\"> </a></td><td>Nephritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001974<a name=\"hpo-HP.580001974\"> </a></td><td>Leukocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010976<a name=\"hpo-HP.580010976\"> </a></td><td>B lymphocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000010<a name=\"hpo-HP.580000010\"> </a></td><td>Recurrent urinary tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0100807<a name=\"hpo-HP.580100807\"> </a></td><td>Long fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0000653<a name=\"hpo-HP.580000653\"> </a></td><td>Sparse eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0000171<a name=\"hpo-HP.580000171\"> </a></td><td>Microglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002575<a name=\"hpo-HP.580002575\"> </a></td><td>Tracheoesophageal fistula</td></tr><tr><td style=\"white-space:nowrap\">HP:0009933<a name=\"hpo-HP.580009933\"> </a></td><td>Narrow naris</td></tr><tr><td style=\"white-space:nowrap\">HP:0000883<a name=\"hpo-HP.580000883\"> </a></td><td>Thin ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000121<a name=\"hpo-HP.580000121\"> </a></td><td>Nephrocalcinosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001349<a name=\"hpo-HP.580001349\"> </a></td><td>Facial diplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012037<a name=\"hpo-HP.580012037\"> </a></td><td>Pectoralis amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100560<a name=\"hpo-HP.580100560\"> </a></td><td>Upper limb asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0005684<a name=\"hpo-HP.580005684\"> </a></td><td>Distal arthrogryposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010722<a name=\"hpo-HP.580010722\"> </a></td><td>Asymmetry of the ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0009380<a name=\"hpo-HP.580009380\"> </a></td><td>Aplasia of the fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0001657<a name=\"hpo-HP.580001657\"> </a></td><td>Prolonged QT interval</td></tr><tr><td style=\"white-space:nowrap\">HP:0002040<a name=\"hpo-HP.580002040\"> </a></td><td>Esophageal varix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000613<a name=\"hpo-HP.580000613\"> </a></td><td>Photophobia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000561<a name=\"hpo-HP.580000561\"> </a></td><td>Absent eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002223<a name=\"hpo-HP.580002223\"> </a></td><td>Absent eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0002591<a name=\"hpo-HP.580002591\"> </a></td><td>Polyphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002373<a name=\"hpo-HP.580002373\"> </a></td><td>Febrile seizure (within the age range of 3 months to 6 years)</td></tr><tr><td style=\"white-space:nowrap\">HP:0002419<a name=\"hpo-HP.580002419\"> </a></td><td>Molar tooth sign on MRI</td></tr><tr><td style=\"white-space:nowrap\">HP:0001010<a name=\"hpo-HP.580001010\"> </a></td><td>Hypopigmentation of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0005772<a name=\"hpo-HP.580005772\"> </a></td><td>Aplasia/Hypoplasia of the tibia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002211<a name=\"hpo-HP.580002211\"> </a></td><td>White forelock</td></tr><tr><td style=\"white-space:nowrap\">HP:0007126<a name=\"hpo-HP.580007126\"> </a></td><td>Proximal amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003798<a name=\"hpo-HP.580003798\"> </a></td><td>Nemaline bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0006533<a name=\"hpo-HP.580006533\"> </a></td><td>Bronchodysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003391<a name=\"hpo-HP.580003391\"> </a></td><td>Gowers sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0000771<a name=\"hpo-HP.580000771\"> </a></td><td>Gynecomastia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100785<a name=\"hpo-HP.580100785\"> </a></td><td>Insomnia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010529<a name=\"hpo-HP.580010529\"> </a></td><td>Echolalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000363<a name=\"hpo-HP.580000363\"> </a></td><td>Abnormality of earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002612<a name=\"hpo-HP.580002612\"> </a></td><td>Congenital hepatic fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006721<a name=\"hpo-HP.580006721\"> </a></td><td>Acute lymphoblastic leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001958<a name=\"hpo-HP.580001958\"> </a></td><td>Nonketotic hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003457<a name=\"hpo-HP.580003457\"> </a></td><td>EMG abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0010636<a name=\"hpo-HP.580010636\"> </a></td><td>Schizencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005266<a name=\"hpo-HP.580005266\"> </a></td><td>Intestinal polyp</td></tr><tr><td style=\"white-space:nowrap\">HP:0200063<a name=\"hpo-HP.580200063\"> </a></td><td>Colorectal polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001762<a name=\"hpo-HP.580001762\"> </a></td><td>Talipes equinovarus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000056<a name=\"hpo-HP.580000056\"> </a></td><td>Abnormality of the clitoris</td></tr><tr><td style=\"white-space:nowrap\">HP:0008655<a name=\"hpo-HP.580008655\"> </a></td><td>Aplasia/Hypoplasia of the fallopian tube</td></tr><tr><td style=\"white-space:nowrap\">HP:0002072<a name=\"hpo-HP.580002072\"> </a></td><td>Chorea</td></tr><tr><td style=\"white-space:nowrap\">HP:0008734<a name=\"hpo-HP.580008734\"> </a></td><td>Decreased testicular size</td></tr><tr><td style=\"white-space:nowrap\">HP:0002136<a name=\"hpo-HP.580002136\"> </a></td><td>Broad-based gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0010958<a name=\"hpo-HP.580010958\"> </a></td><td>Bilateral renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002510<a name=\"hpo-HP.580002510\"> </a></td><td>Spastic tetraplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003234<a name=\"hpo-HP.580003234\"> </a></td><td>Decreased plasma carnitine</td></tr><tr><td style=\"white-space:nowrap\">HP:0000720<a name=\"hpo-HP.580000720\"> </a></td><td>Mood swings</td></tr><tr><td style=\"white-space:nowrap\">HP:0012638<a name=\"hpo-HP.580012638\"> </a></td><td>Abnormal nervous system physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002803<a name=\"hpo-HP.580002803\"> </a></td><td>Congenital contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0000152<a name=\"hpo-HP.580000152\"> </a></td><td>Abnormality of head or neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0004377<a name=\"hpo-HP.580004377\"> </a></td><td>Hematological neoplasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0100006<a name=\"hpo-HP.580100006\"> </a></td><td>Neoplasm of the central nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0012759<a name=\"hpo-HP.580012759\"> </a></td><td>Neurodevelopmental abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0011805<a name=\"hpo-HP.580011805\"> </a></td><td>Abnormal skeletal muscle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003634<a name=\"hpo-HP.580003634\"> </a></td><td>Amyoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001507<a name=\"hpo-HP.580001507\"> </a></td><td>Growth abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001939<a name=\"hpo-HP.580001939\"> </a></td><td>Abnormality of metabolism/homeostasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011013<a name=\"hpo-HP.580011013\"> </a></td><td>Abnormal circulating carbohydrate concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0410008<a name=\"hpo-HP.580410008\"> </a></td><td>Abnormality of the peripheral nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0200134<a name=\"hpo-HP.580200134\"> </a></td><td>Epileptic encephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001881<a name=\"hpo-HP.580001881\"> </a></td><td>Abnormal leukocyte morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0005549<a name=\"hpo-HP.580005549\"> </a></td><td>obsolete Congenital neutropenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004439<a name=\"hpo-HP.580004439\"> </a></td><td>Craniofacial dysostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012443<a name=\"hpo-HP.580012443\"> </a></td><td>Abnormality of brain morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000202<a name=\"hpo-HP.580000202\"> </a></td><td>Oral cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0011842<a name=\"hpo-HP.580011842\"> </a></td><td>Abnormality of skeletal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003808<a name=\"hpo-HP.580003808\"> </a></td><td>Abnormal muscle tone</td></tr><tr><td style=\"white-space:nowrap\">HP:0001574<a name=\"hpo-HP.580001574\"> </a></td><td>Abnormality of the integument</td></tr><tr><td style=\"white-space:nowrap\">HP:0030056<a name=\"hpo-HP.580030056\"> </a></td><td>Uncombable hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0003549<a name=\"hpo-HP.580003549\"> </a></td><td>Abnormality of connective tissue</td></tr><tr><td style=\"white-space:nowrap\">HP:0030875<a name=\"hpo-HP.580030875\"> </a></td><td>Abnormality of pulmonary circulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000118<a name=\"hpo-HP.580000118\"> </a></td><td>Phenotypic abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0012469<a name=\"hpo-HP.580012469\"> </a></td><td>Infantile spasms</td></tr><tr><td style=\"white-space:nowrap\">HP:0032894<a name=\"hpo-HP.580032894\"> </a></td><td>Seizure precipitated by febrile infection</td></tr><tr><td style=\"white-space:nowrap\">HP:0100661<a name=\"hpo-HP.580100661\"> </a></td><td>Trigeminal neuralgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012207<a name=\"hpo-HP.580012207\"> </a></td><td>Reduced sperm motility</td></tr><tr><td style=\"white-space:nowrap\">HP:0000798<a name=\"hpo-HP.580000798\"> </a></td><td>Oligospermia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012864<a name=\"hpo-HP.580012864\"> </a></td><td>Abnormal sperm morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008232<a name=\"hpo-HP.580008232\"> </a></td><td>Elevated circulating follicle stimulating hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0040306<a name=\"hpo-HP.580040306\"> </a></td><td>Decreased male libido</td></tr><tr><td style=\"white-space:nowrap\">HP:0012208<a name=\"hpo-HP.580012208\"> </a></td><td>Immotile sperm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000027<a name=\"hpo-HP.580000027\"> </a></td><td>Azoospermia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000870<a name=\"hpo-HP.580000870\"> </a></td><td>Increased circulating prolactin concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0008187<a name=\"hpo-HP.580008187\"> </a></td><td>Absence of secondary sex characteristics</td></tr><tr><td style=\"white-space:nowrap\">HP:0010469<a name=\"hpo-HP.580010469\"> </a></td><td>Absent testis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011969<a name=\"hpo-HP.580011969\"> </a></td><td>Elevated circulating luteinizing hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0040171<a name=\"hpo-HP.580040171\"> </a></td><td>Decreased serum testosterone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0003251<a name=\"hpo-HP.580003251\"> </a></td><td>Male infertility</td></tr><tr><td style=\"white-space:nowrap\">HP:0009804<a name=\"hpo-HP.580009804\"> </a></td><td>Reduced number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000548<a name=\"hpo-HP.580000548\"> </a></td><td>Cone/cone-rod dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000546<a name=\"hpo-HP.580000546\"> </a></td><td>Retinal degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0008002<a name=\"hpo-HP.580008002\"> </a></td><td>Abnormality of macular pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000608<a name=\"hpo-HP.580000608\"> </a></td><td>Macular degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0030611<a name=\"hpo-HP.580030611\"> </a></td><td>Retinal pigment epithelial loss on macular OCT</td></tr><tr><td style=\"white-space:nowrap\">HP:0001135<a name=\"hpo-HP.580001135\"> </a></td><td>Chorioretinal dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030468<a name=\"hpo-HP.580030468\"> </a></td><td>Abnormal multifocal electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:00030532<a name=\"hpo-HP.5800030532\"> </a></td><td>Visual acuity test abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0007401<a name=\"hpo-HP.580007401\"> </a></td><td>Macular atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030466<a name=\"hpo-HP.580030466\"> </a></td><td>Abnormal full-field electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:007737<a name=\"hpo-HP.58007737\"> </a></td><td>Bone spicule pigmentation of the retina</td></tr><tr><td style=\"white-space:nowrap\">HP:0011342<a name=\"hpo-HP.580011342\"> </a></td><td>Mild global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0030610<a name=\"hpo-HP.580030610\"> </a></td><td>Photoreceptor outer segment loss on macular OCT</td></tr><tr><td style=\"white-space:nowrap\">HP:0007722<a name=\"hpo-HP.580007722\"> </a></td><td>Retinal pigment epithelial atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030493<a name=\"hpo-HP.580030493\"> </a></td><td>Abnormality of foveal pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0007843<a name=\"hpo-HP.580007843\"> </a></td><td>Attenuation of retinal blood vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0007754<a name=\"hpo-HP.580007754\"> </a></td><td>Macular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011509<a name=\"hpo-HP.580011509\"> </a></td><td>Macular hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0008527<a name=\"hpo-HP.580008527\"> </a></td><td>Congenital sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0200070<a name=\"hpo-HP.580200070\"> </a></td><td>Peripheral retinal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0007793<a name=\"hpo-HP.580007793\"> </a></td><td>Granular macular appearance</td></tr><tr><td style=\"white-space:nowrap\">HP:0007987<a name=\"hpo-HP.580007987\"> </a></td><td>Progressive visual field defects</td></tr><tr><td style=\"white-space:nowrap\">HP:0100817<a name=\"hpo-HP.580100817\"> </a></td><td>Renovascular hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0007868<a name=\"hpo-HP.580007868\"> </a></td><td>obsolete Age-related macular degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0030527<a name=\"hpo-HP.580030527\"> </a></td><td>Very severe constriction of peripheral visual field</td></tr><tr><td style=\"white-space:nowrap\">HP:0030551<a name=\"hpo-HP.580030551\"> </a></td><td>Visual acuity light perception with projection</td></tr><tr><td style=\"white-space:nowrap\">HP:0011505<a name=\"hpo-HP.580011505\"> </a></td><td>Cystoid macular edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0010442<a name=\"hpo-HP.580010442\"> </a></td><td>Polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0007642<a name=\"hpo-HP.580007642\"> </a></td><td>Congenital stationary night blindness</td></tr><tr><td style=\"white-space:nowrap\">HP:0009073<a name=\"hpo-HP.580009073\"> </a></td><td>Progressive proximal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003741<a name=\"hpo-HP.580003741\"> </a></td><td>Congenital muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100299<a name=\"hpo-HP.580100299\"> </a></td><td>Muscle fiber inclusion bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0003540<a name=\"hpo-HP.580003540\"> </a></td><td>Impaired platelet aggregation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010489<a name=\"hpo-HP.580010489\"> </a></td><td>Absent palmar crease</td></tr><tr><td style=\"white-space:nowrap\">HP:0009824<a name=\"hpo-HP.580009824\"> </a></td><td>Upper limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002395<a name=\"hpo-HP.580002395\"> </a></td><td>Lower limb hyperreflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001138<a name=\"hpo-HP.580001138\"> </a></td><td>Optic neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0007103<a name=\"hpo-HP.580007103\"> </a></td><td>Hypointensity of cerebral white matter on MRI</td></tr><tr><td style=\"white-space:nowrap\">HP:0003458<a name=\"hpo-HP.580003458\"> </a></td><td>EMG: myopathic abnormalities</td></tr><tr><td style=\"white-space:nowrap\">HP:0002987<a name=\"hpo-HP.580002987\"> </a></td><td>Elbow flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0006466<a name=\"hpo-HP.580006466\"> </a></td><td>Ankle flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0008458<a name=\"hpo-HP.580008458\"> </a></td><td>Progressive congenital scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000473<a name=\"hpo-HP.580000473\"> </a></td><td>Torticollis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011800<a name=\"hpo-HP.580011800\"> </a></td><td>Midface retrusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000597<a name=\"hpo-HP.580000597\"> </a></td><td>Ophthalmoparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005853<a name=\"hpo-HP.580005853\"> </a></td><td>Congenital foot contraction deformities</td></tr><tr><td style=\"white-space:nowrap\">HP:0007002<a name=\"hpo-HP.580007002\"> </a></td><td>Motor axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003327<a name=\"hpo-HP.580003327\"> </a></td><td>Axial muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003306<a name=\"hpo-HP.580003306\"> </a></td><td>Spinal rigidity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002068<a name=\"hpo-HP.580002068\"> </a></td><td>Neuromuscular dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001002<a name=\"hpo-HP.580001002\"> </a></td><td>obsolete Decreased subcutaneous fat</td></tr><tr><td style=\"white-space:nowrap\">HP:0002880<a name=\"hpo-HP.580002880\"> </a></td><td>obsolete Respiratory difficulties</td></tr><tr><td style=\"white-space:nowrap\">HP:0006829<a name=\"hpo-HP.580006829\"> </a></td><td>Severe muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011448<a name=\"hpo-HP.580011448\"> </a></td><td>Ankle clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0003487<a name=\"hpo-HP.580003487\"> </a></td><td>Babinski sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0002378<a name=\"hpo-HP.580002378\"> </a></td><td>Hand tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002747<a name=\"hpo-HP.580002747\"> </a></td><td>Respiratory insufficiency due to muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002579<a name=\"hpo-HP.580002579\"> </a></td><td>Gastrointestinal dysmotility</td></tr><tr><td style=\"white-space:nowrap\">HP:0001041<a name=\"hpo-HP.580001041\"> </a></td><td>Facial erythema</td></tr><tr><td style=\"white-space:nowrap\">HP:0040180<a name=\"hpo-HP.580040180\"> </a></td><td>Hyperkeratosis pilaris</td></tr><tr><td style=\"white-space:nowrap\">HP:0001382<a name=\"hpo-HP.580001382\"> </a></td><td>Joint hypermobility</td></tr><tr><td style=\"white-space:nowrap\">HP:0003722<a name=\"hpo-HP.580003722\"> </a></td><td>Neck flexor weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003323<a name=\"hpo-HP.580003323\"> </a></td><td>Progressive muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002380<a name=\"hpo-HP.580002380\"> </a></td><td>Fasciculations</td></tr><tr><td style=\"white-space:nowrap\">HP:0012785<a name=\"hpo-HP.580012785\"> </a></td><td>Flexion contracture of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0007936<a name=\"hpo-HP.580007936\"> </a></td><td>Restrictive external ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030319<a name=\"hpo-HP.580030319\"> </a></td><td>Weakness of facial musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0008936<a name=\"hpo-HP.580008936\"> </a></td><td>Muscular hypotonia of the trunk</td></tr><tr><td style=\"white-space:nowrap\">HP:0030230<a name=\"hpo-HP.580030230\"> </a></td><td>Central core regions in muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0011471<a name=\"hpo-HP.580011471\"> </a></td><td>Gastrostomy tube feeding in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001290<a name=\"hpo-HP.580001290\"> </a></td><td>Generalized hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002421<a name=\"hpo-HP.580002421\"> </a></td><td>Poor head control</td></tr><tr><td style=\"white-space:nowrap\">HP:0010301<a name=\"hpo-HP.580010301\"> </a></td><td>Spinal dysraphism</td></tr><tr><td style=\"white-space:nowrap\">HP:0004303<a name=\"hpo-HP.580004303\"> </a></td><td>Abnormal muscle fiber morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009046<a name=\"hpo-HP.580009046\"> </a></td><td>Difficulty running</td></tr><tr><td style=\"white-space:nowrap\">HP:0003715<a name=\"hpo-HP.580003715\"> </a></td><td>Myofibrillar myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000467<a name=\"hpo-HP.580000467\"> </a></td><td>Neck muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001999<a name=\"hpo-HP.580001999\"> </a></td><td>Abnormal facial shape</td></tr><tr><td style=\"white-space:nowrap\">HP:0002751<a name=\"hpo-HP.580002751\"> </a></td><td>Kyphoscoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030223<a name=\"hpo-HP.580030223\"> </a></td><td>Perseveration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002344<a name=\"hpo-HP.580002344\"> </a></td><td>Progressive neurologic deterioration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002522<a name=\"hpo-HP.580002522\"> </a></td><td>Areflexia of lower limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0003805<a name=\"hpo-HP.580003805\"> </a></td><td>Rimmed vacuoles</td></tr><tr><td style=\"white-space:nowrap\">HP:0005781<a name=\"hpo-HP.580005781\"> </a></td><td>Contractures of the large joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0040083<a name=\"hpo-HP.580040083\"> </a></td><td>Toe walking</td></tr><tr><td style=\"white-space:nowrap\">HP:0003749<a name=\"hpo-HP.580003749\"> </a></td><td>Pelvic girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0012444<a name=\"hpo-HP.580012444\"> </a></td><td>Brain atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003738<a name=\"hpo-HP.580003738\"> </a></td><td>Exercise-induced myalgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003756<a name=\"hpo-HP.580003756\"> </a></td><td>Skeletal myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002492<a name=\"hpo-HP.580002492\"> </a></td><td>Morphological abnormality of the corticospinal tract</td></tr><tr><td style=\"white-space:nowrap\">HP:0100302<a name=\"hpo-HP.580100302\"> </a></td><td>Muscle fiber tubuloreticular inclusions</td></tr><tr><td style=\"white-space:nowrap\">HP:0006817<a name=\"hpo-HP.580006817\"> </a></td><td>Aplasia/Hypoplasia of the cerebellar vermis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003473<a name=\"hpo-HP.580003473\"> </a></td><td>Fatigable weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002077<a name=\"hpo-HP.580002077\"> </a></td><td>Migraine with aura</td></tr><tr><td style=\"white-space:nowrap\">HP:0100559<a name=\"hpo-HP.580100559\"> </a></td><td>Lower limb asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0002079<a name=\"hpo-HP.580002079\"> </a></td><td>Hypoplasia of the corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002804<a name=\"hpo-HP.580002804\"> </a></td><td>Arthrogryposis multiplex congenita</td></tr><tr><td style=\"white-space:nowrap\">HP:0011623<a name=\"hpo-HP.580011623\"> </a></td><td>Muscular ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002191<a name=\"hpo-HP.580002191\"> </a></td><td>Progressive spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003390<a name=\"hpo-HP.580003390\"> </a></td><td>Sensory axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006986<a name=\"hpo-HP.580006986\"> </a></td><td>Upper limb spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002464<a name=\"hpo-HP.580002464\"> </a></td><td>Spastic dysarthria</td></tr><tr><td style=\"white-space:nowrap\">HP:0001308<a name=\"hpo-HP.580001308\"> </a></td><td>Tongue fasciculations</td></tr><tr><td style=\"white-space:nowrap\">HP:0007010<a name=\"hpo-HP.580007010\"> </a></td><td>Poor fine motor coordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0003737<a name=\"hpo-HP.580003737\"> </a></td><td>Mitochondrial myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0008012<a name=\"hpo-HP.580008012\"> </a></td><td>obsolete Congenital myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008872<a name=\"hpo-HP.580008872\"> </a></td><td>Feeding difficulties in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005750<a name=\"hpo-HP.580005750\"> </a></td><td>Contractures of the joints of the lower limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0009067<a name=\"hpo-HP.580009067\"> </a></td><td>Progressive spinal muscular atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001623<a name=\"hpo-HP.580001623\"> </a></td><td>Breech presentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001374<a name=\"hpo-HP.580001374\"> </a></td><td>Congenital hip dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002359<a name=\"hpo-HP.580002359\"> </a></td><td>Frequent falls</td></tr><tr><td style=\"white-space:nowrap\">HP:0003803<a name=\"hpo-HP.580003803\"> </a></td><td>Type 1 muscle fiber predominance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011410<a name=\"hpo-HP.580011410\"> </a></td><td>Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0008947<a name=\"hpo-HP.580008947\"> </a></td><td>Infantile muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100501<a name=\"hpo-HP.580100501\"> </a></td><td>Recurrent bronchiolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003789<a name=\"hpo-HP.580003789\"> </a></td><td>Minicore myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000544<a name=\"hpo-HP.580000544\"> </a></td><td>External ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001605<a name=\"hpo-HP.580001605\"> </a></td><td>Vocal cord paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003712<a name=\"hpo-HP.580003712\"> </a></td><td>Skeletal muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0012507<a name=\"hpo-HP.580012507\"> </a></td><td>Weakness of orbicularis oculi muscle</td></tr><tr><td style=\"white-space:nowrap\">HP:0009816<a name=\"hpo-HP.580009816\"> </a></td><td>Lower limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0008935<a name=\"hpo-HP.580008935\"> </a></td><td>Generalized neonatal hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003484<a name=\"hpo-HP.580003484\"> </a></td><td>Upper limb muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0008331<a name=\"hpo-HP.580008331\"> </a></td><td>Elevated creatine kinase after exercise</td></tr><tr><td style=\"white-space:nowrap\">HP:0001315<a name=\"hpo-HP.580001315\"> </a></td><td>Reduced tendon reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0012473<a name=\"hpo-HP.580012473\"> </a></td><td>Tongue atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003273<a name=\"hpo-HP.580003273\"> </a></td><td>Hip contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0006380<a name=\"hpo-HP.580006380\"> </a></td><td>Knee flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0003752<a name=\"hpo-HP.580003752\"> </a></td><td>Episodic flaccid weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0100298<a name=\"hpo-HP.580100298\"> </a></td><td>Motheaten muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0003693<a name=\"hpo-HP.580003693\"> </a></td><td>Distal amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002167<a name=\"hpo-HP.580002167\"> </a></td><td>Neurological speech impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0003388<a name=\"hpo-HP.580003388\"> </a></td><td>Easy fatigability</td></tr><tr><td style=\"white-space:nowrap\">HP:0001348<a name=\"hpo-HP.580001348\"> </a></td><td>Brisk reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0003445<a name=\"hpo-HP.580003445\"> </a></td><td>EMG: neuropathic changes</td></tr><tr><td style=\"white-space:nowrap\">HP:0009063<a name=\"hpo-HP.580009063\"> </a></td><td>Progressive distal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003720<a name=\"hpo-HP.580003720\"> </a></td><td>Generalized muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002493<a name=\"hpo-HP.580002493\"> </a></td><td>Upper motor neuron dysfunction</td></tr><tr><td style=\"white-space:nowrap\">HP:0012448<a name=\"hpo-HP.580012448\"> </a></td><td>Delayed myelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0001338<a name=\"hpo-HP.580001338\"> </a></td><td>Partial agenesis of the corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0006879<a name=\"hpo-HP.580006879\"> </a></td><td>Pontocerebellar atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0200101<a name=\"hpo-HP.580200101\"> </a></td><td>Decreased/absent ankle reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0009020<a name=\"hpo-HP.580009020\"> </a></td><td>Exercise-induced muscle fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002067<a name=\"hpo-HP.580002067\"> </a></td><td>Bradykinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012751<a name=\"hpo-HP.580012751\"> </a></td><td>Abnormal basal ganglia MRI signal intensity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003355<a name=\"hpo-HP.580003355\"> </a></td><td>Aminoaciduria</td></tr><tr><td style=\"white-space:nowrap\">HP:0012450<a name=\"hpo-HP.580012450\"> </a></td><td>Chronic constipation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011834<a name=\"hpo-HP.580011834\"> </a></td><td>Moyamoya phenomenon</td></tr><tr><td style=\"white-space:nowrap\">HP:0001297<a name=\"hpo-HP.580001297\"> </a></td><td>Stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0200049<a name=\"hpo-HP.580200049\"> </a></td><td>Upper limb hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008981<a name=\"hpo-HP.580008981\"> </a></td><td>Calf muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006785<a name=\"hpo-HP.580006785\"> </a></td><td>Limb-girdle muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006957<a name=\"hpo-HP.580006957\"> </a></td><td>Loss of ability to walk</td></tr><tr><td style=\"white-space:nowrap\">HP:0030098<a name=\"hpo-HP.580030098\"> </a></td><td>Reduced muscle dystrophin expression</td></tr><tr><td style=\"white-space:nowrap\">HP:0030115<a name=\"hpo-HP.580030115\"> </a></td><td>Reduced muscle fiber dysferlin</td></tr><tr><td style=\"white-space:nowrap\">HP:0002058<a name=\"hpo-HP.580002058\"> </a></td><td>Myopathic facies</td></tr><tr><td style=\"white-space:nowrap\">HP:0007858<a name=\"hpo-HP.580007858\"> </a></td><td>Chorioretinal lacunae</td></tr><tr><td style=\"white-space:nowrap\">HP:0006657<a name=\"hpo-HP.580006657\"> </a></td><td>Hypoplasia of first ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0007165<a name=\"hpo-HP.580007165\"> </a></td><td>Periventricular heterotopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0009779<a name=\"hpo-HP.580009779\"> </a></td><td>3-4 toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010665<a name=\"hpo-HP.580010665\"> </a></td><td>Bilateral coxa valga</td></tr><tr><td style=\"white-space:nowrap\">HP:0007598<a name=\"hpo-HP.580007598\"> </a></td><td>Bilateral single transverse palmar creases</td></tr><tr><td style=\"white-space:nowrap\">HP:0006101<a name=\"hpo-HP.580006101\"> </a></td><td>Finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010511<a name=\"hpo-HP.580010511\"> </a></td><td>Long toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002370<a name=\"hpo-HP.580002370\"> </a></td><td>Poor coordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0000480<a name=\"hpo-HP.580000480\"> </a></td><td>Retinal coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001770<a name=\"hpo-HP.580001770\"> </a></td><td>Toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010851<a name=\"hpo-HP.580010851\"> </a></td><td>EEG with burst suppression</td></tr><tr><td style=\"white-space:nowrap\">HP:0002791<a name=\"hpo-HP.580002791\"> </a></td><td>Hypoventilation</td></tr><tr><td style=\"white-space:nowrap\">HP:0040075<a name=\"hpo-HP.580040075\"> </a></td><td>Hypopituitarism</td></tr><tr><td style=\"white-space:nowrap\">HP:0012506<a name=\"hpo-HP.580012506\"> </a></td><td>Small pituitary gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000538<a name=\"hpo-HP.580000538\"> </a></td><td>Pseudopapilledema</td></tr><tr><td style=\"white-space:nowrap\">HP:0012717<a name=\"hpo-HP.580012717\"> </a></td><td>Severe conductive hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001370<a name=\"hpo-HP.580001370\"> </a></td><td>Rheumatoid arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000016<a name=\"hpo-HP.580000016\"> </a></td><td>Urinary retention</td></tr><tr><td style=\"white-space:nowrap\">HP:0012537<a name=\"hpo-HP.580012537\"> </a></td><td>Food intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011297<a name=\"hpo-HP.580011297\"> </a></td><td>Abnormal digit morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001273<a name=\"hpo-HP.580001273\"> </a></td><td>Abnormal corpus callosum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0030148<a name=\"hpo-HP.580030148\"> </a></td><td>Heart murmur</td></tr><tr><td style=\"white-space:nowrap\">HP:0045018<a name=\"hpo-HP.580045018\"> </a></td><td>Partial duplication of eyebrows</td></tr><tr><td style=\"white-space:nowrap\">HP:0008998<a name=\"hpo-HP.580008998\"> </a></td><td>Pectoralis hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001707<a name=\"hpo-HP.580001707\"> </a></td><td>Abnormal right ventricle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001540<a name=\"hpo-HP.580001540\"> </a></td><td>Diastasis recti</td></tr><tr><td style=\"white-space:nowrap\">HP:0100693<a name=\"hpo-HP.580100693\"> </a></td><td>Iridodonesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002265<a name=\"hpo-HP.580002265\"> </a></td><td>Large fleshy ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001132<a name=\"hpo-HP.580001132\"> </a></td><td>Lens subluxation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004927<a name=\"hpo-HP.580004927\"> </a></td><td>Pulmonary artery dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005619<a name=\"hpo-HP.580005619\"> </a></td><td>Thoracolumbar kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008619<a name=\"hpo-HP.580008619\"> </a></td><td>Bilateral sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001045<a name=\"hpo-HP.580001045\"> </a></td><td>Vitiligo</td></tr><tr><td style=\"white-space:nowrap\">HP:0009124<a name=\"hpo-HP.580009124\"> </a></td><td>Abnormal adipose tissue morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002979<a name=\"hpo-HP.580002979\"> </a></td><td>Bowing of the legs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000455<a name=\"hpo-HP.580000455\"> </a></td><td>Broad nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001007<a name=\"hpo-HP.580001007\"> </a></td><td>Hirsutism</td></tr><tr><td style=\"white-space:nowrap\">HP:0010314<a name=\"hpo-HP.580010314\"> </a></td><td>Premature thelarche</td></tr><tr><td style=\"white-space:nowrap\">HP:0000075<a name=\"hpo-HP.580000075\"> </a></td><td>Renal duplication</td></tr><tr><td style=\"white-space:nowrap\">HP:0000368<a name=\"hpo-HP.580000368\"> </a></td><td>Low-set, posteriorly rotated ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001052<a name=\"hpo-HP.580001052\"> </a></td><td>Nevus flammeus</td></tr><tr><td style=\"white-space:nowrap\">HP:0200048<a name=\"hpo-HP.580200048\"> </a></td><td>Cyanotic episode</td></tr><tr><td style=\"white-space:nowrap\">HP:0001902<a name=\"hpo-HP.580001902\"> </a></td><td>Giant platelets</td></tr><tr><td style=\"white-space:nowrap\">HP:0030043<a name=\"hpo-HP.580030043\"> </a></td><td>Hip subluxation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002938<a name=\"hpo-HP.580002938\"> </a></td><td>Lumbar hyperlordosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030084<a name=\"hpo-HP.580030084\"> </a></td><td>Clinodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005560<a name=\"hpo-HP.580005560\"> </a></td><td>Imbalanced hemoglobin synthesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001539<a name=\"hpo-HP.580001539\"> </a></td><td>Omphalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0009778<a name=\"hpo-HP.580009778\"> </a></td><td>Short thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002277<a name=\"hpo-HP.580002277\"> </a></td><td>Horner syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0011701<a name=\"hpo-HP.580011701\"> </a></td><td>Multifocal atrial tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005274<a name=\"hpo-HP.580005274\"> </a></td><td>Prominent nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001262<a name=\"hpo-HP.580001262\"> </a></td><td>Excessive daytime somnolence</td></tr><tr><td style=\"white-space:nowrap\">HP:0001285<a name=\"hpo-HP.580001285\"> </a></td><td>Spastic tetraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012171<a name=\"hpo-HP.580012171\"> </a></td><td>Stereotypical hand wringing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002518<a name=\"hpo-HP.580002518\"> </a></td><td>Abnormality of the periventricular white matter</td></tr><tr><td style=\"white-space:nowrap\">HP:0005692<a name=\"hpo-HP.580005692\"> </a></td><td>Joint hyperflexibility</td></tr><tr><td style=\"white-space:nowrap\">HP:0007440<a name=\"hpo-HP.580007440\"> </a></td><td>Generalized hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001805<a name=\"hpo-HP.580001805\"> </a></td><td>Onychogryposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011945<a name=\"hpo-HP.580011945\"> </a></td><td>Bronchiolitis obliterans organizing pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003763<a name=\"hpo-HP.580003763\"> </a></td><td>Bruxism</td></tr><tr><td style=\"white-space:nowrap\">HP:0010500<a name=\"hpo-HP.580010500\"> </a></td><td>Hyperextensibility of the knee</td></tr><tr><td style=\"white-space:nowrap\">HP:0040115<a name=\"hpo-HP.580040115\"> </a></td><td>Abnormality of the Eustachian tube</td></tr><tr><td style=\"white-space:nowrap\">HP:0008751<a name=\"hpo-HP.580008751\"> </a></td><td>Laryngeal cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0000403<a name=\"hpo-HP.580000403\"> </a></td><td>Recurrent otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0001787<a name=\"hpo-HP.580001787\"> </a></td><td>Abnormal delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0002571<a name=\"hpo-HP.580002571\"> </a></td><td>Achalasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002615<a name=\"hpo-HP.580002615\"> </a></td><td>Hypotension</td></tr><tr><td style=\"white-space:nowrap\">HP:0003550<a name=\"hpo-HP.580003550\"> </a></td><td>Predominantly lower limb lymphedema</td></tr><tr><td style=\"white-space:nowrap\">HP:0030363<a name=\"hpo-HP.580030363\"> </a></td><td>Primary Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0001727<a name=\"hpo-HP.580001727\"> </a></td><td>Thromboembolic stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0100603<a name=\"hpo-HP.580100603\"> </a></td><td>Toxemia of pregnancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0010836<a name=\"hpo-HP.580010836\"> </a></td><td>Abnormal circulating copper concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0000356<a name=\"hpo-HP.580000356\"> </a></td><td>Abnormality of the outer ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0002197<a name=\"hpo-HP.580002197\"> </a></td><td>Generalized-onset seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011436<a name=\"hpo-HP.580011436\"> </a></td><td>Abnormal maternal serum screening</td></tr><tr><td style=\"white-space:nowrap\">HP:0003517<a name=\"hpo-HP.580003517\"> </a></td><td>Birth length greater than 97th percentile</td></tr><tr><td style=\"white-space:nowrap\">HP:0003561<a name=\"hpo-HP.580003561\"> </a></td><td>Birth length less than 3rd percentile</td></tr><tr><td style=\"white-space:nowrap\">HP:0012188<a name=\"hpo-HP.580012188\"> </a></td><td>Hyperemesis gravidarum</td></tr><tr><td style=\"white-space:nowrap\">HP:0010519<a name=\"hpo-HP.580010519\"> </a></td><td>Increased fetal movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0030244<a name=\"hpo-HP.580030244\"> </a></td><td>Maternal fever in pregnancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0008071<a name=\"hpo-HP.580008071\"> </a></td><td>Maternal hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0100622<a name=\"hpo-HP.580100622\"> </a></td><td>Maternal seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011438<a name=\"hpo-HP.580011438\"> </a></td><td>Maternal teratogenic exposure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001998<a name=\"hpo-HP.580001998\"> </a></td><td>Neonatal hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0040187<a name=\"hpo-HP.580040187\"> </a></td><td>Neonatal sepsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002033<a name=\"hpo-HP.580002033\"> </a></td><td>Poor suck</td></tr><tr><td style=\"white-space:nowrap\">HP:0006579<a name=\"hpo-HP.580006579\"> </a></td><td>Prolonged neonatal jaundice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001724<a name=\"hpo-HP.580001724\"> </a></td><td>obsolete Aortic dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010621<a name=\"hpo-HP.580010621\"> </a></td><td>Cutaneous syndactyly of toes</td></tr><tr><td style=\"white-space:nowrap\">HP:0001880<a name=\"hpo-HP.580001880\"> </a></td><td>Eosinophilia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000162<a name=\"hpo-HP.580000162\"> </a></td><td>Glossoptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100578<a name=\"hpo-HP.580100578\"> </a></td><td>Lipoatrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002562<a name=\"hpo-HP.580002562\"> </a></td><td>Low-set nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0012893<a name=\"hpo-HP.580012893\"> </a></td><td>Neck muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001027<a name=\"hpo-HP.580001027\"> </a></td><td>Soft, doughy skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0100738<a name=\"hpo-HP.580100738\"> </a></td><td>Abnormal eating behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0007328<a name=\"hpo-HP.580007328\"> </a></td><td>Impaired pain sensation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002878<a name=\"hpo-HP.580002878\"> </a></td><td>Respiratory failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001776<a name=\"hpo-HP.580001776\"> </a></td><td>Bilateral talipes equinovarus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001360<a name=\"hpo-HP.580001360\"> </a></td><td>Holoprosencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001973<a name=\"hpo-HP.580001973\"> </a></td><td>Autoimmune thrombocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100749<a name=\"hpo-HP.580100749\"> </a></td><td>Chest pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0012531<a name=\"hpo-HP.580012531\"> </a></td><td>Pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0007585<a name=\"hpo-HP.580007585\"> </a></td><td>Skin fragility with non-scarring blistering</td></tr><tr><td style=\"white-space:nowrap\">HP:0002108<a name=\"hpo-HP.580002108\"> </a></td><td>Spontaneous pneumothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0006562<a name=\"hpo-HP.580006562\"> </a></td><td>Viral hepatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012647<a name=\"hpo-HP.580012647\"> </a></td><td>Abnormal inflammatory response</td></tr><tr><td style=\"white-space:nowrap\">HP:0012088<a name=\"hpo-HP.580012088\"> </a></td><td>Abnormal urinary odor</td></tr><tr><td style=\"white-space:nowrap\">HP:0011458<a name=\"hpo-HP.580011458\"> </a></td><td>Abdominal symptom</td></tr><tr><td style=\"white-space:nowrap\">HP:0002829<a name=\"hpo-HP.580002829\"> </a></td><td>Arthralgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010783<a name=\"hpo-HP.580010783\"> </a></td><td>Erythema</td></tr><tr><td style=\"white-space:nowrap\">HP:0010307<a name=\"hpo-HP.580010307\"> </a></td><td>Stridor</td></tr><tr><td style=\"white-space:nowrap\">HP:0001269<a name=\"hpo-HP.580001269\"> </a></td><td>Hemiparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006532<a name=\"hpo-HP.580006532\"> </a></td><td>Recurrent pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002580<a name=\"hpo-HP.580002580\"> </a></td><td>Volvulus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012387<a name=\"hpo-HP.580012387\"> </a></td><td>Bronchitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001266<a name=\"hpo-HP.580001266\"> </a></td><td>Choreoathetosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001531<a name=\"hpo-HP.580001531\"> </a></td><td>Failure to thrive in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011470<a name=\"hpo-HP.580011470\"> </a></td><td>Nasogastric tube feeding in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001361<a name=\"hpo-HP.580001361\"> </a></td><td>Nystagmus-induced head nodding</td></tr><tr><td style=\"white-space:nowrap\">HP:0001997<a name=\"hpo-HP.580001997\"> </a></td><td>Gout</td></tr><tr><td style=\"white-space:nowrap\">HP:0000965<a name=\"hpo-HP.580000965\"> </a></td><td>Cutis marmorata</td></tr><tr><td style=\"white-space:nowrap\">HP:0010316<a name=\"hpo-HP.580010316\"> </a></td><td>Ebstein anomaly of the tricuspid valve</td></tr><tr><td style=\"white-space:nowrap\">HP:0010543<a name=\"hpo-HP.580010543\"> </a></td><td>Opsoclonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0007704<a name=\"hpo-HP.580007704\"> </a></td><td>Paroxysmal involuntary eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0030364<a name=\"hpo-HP.580030364\"> </a></td><td>Secondary Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0007738<a name=\"hpo-HP.580007738\"> </a></td><td>Uncontrolled eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0030366<a name=\"hpo-HP.580030366\"> </a></td><td>Delivery by Odon device</td></tr><tr><td style=\"white-space:nowrap\">HP:0011411<a name=\"hpo-HP.580011411\"> </a></td><td>Forceps delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0030369<a name=\"hpo-HP.580030369\"> </a></td><td>Induced vaginal delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0005268<a name=\"hpo-HP.580005268\"> </a></td><td>Spontaneous abortion</td></tr><tr><td style=\"white-space:nowrap\">HP:0030365<a name=\"hpo-HP.580030365\"> </a></td><td>Vaginal birth after Caesarian</td></tr><tr><td style=\"white-space:nowrap\">HP:0011412<a name=\"hpo-HP.580011412\"> </a></td><td>Ventouse delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0002572<a name=\"hpo-HP.580002572\"> </a></td><td>Episodic vomiting</td></tr><tr><td style=\"white-space:nowrap\">HP:0030350<a name=\"hpo-HP.580030350\"> </a></td><td>Erythematous papule</td></tr><tr><td style=\"white-space:nowrap\">HP:0001386<a name=\"hpo-HP.580001386\"> </a></td><td>Joint swelling</td></tr><tr><td style=\"white-space:nowrap\">HP:0000147<a name=\"hpo-HP.580000147\"> </a></td><td>Polycystic ovaries</td></tr><tr><td style=\"white-space:nowrap\">HP:0012412<a name=\"hpo-HP.580012412\"> </a></td><td>Premature adrenarche</td></tr><tr><td style=\"white-space:nowrap\">HP:0004411<a name=\"hpo-HP.580004411\"> </a></td><td>Deviated nasal septum</td></tr><tr><td style=\"white-space:nowrap\">HP:0040183<a name=\"hpo-HP.580040183\"> </a></td><td>Encopresis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100507<a name=\"hpo-HP.580100507\"> </a></td><td>Reduced blood folate concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0007011<a name=\"hpo-HP.580007011\"> </a></td><td>Fourth cranial nerve palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000375<a name=\"hpo-HP.580000375\"> </a></td><td>Abnormal cochlea morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009911<a name=\"hpo-HP.580009911\"> </a></td><td>Abnormal temporal bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000081<a name=\"hpo-HP.580000081\"> </a></td><td>Duplicated collecting system</td></tr><tr><td style=\"white-space:nowrap\">HP:0006894<a name=\"hpo-HP.580006894\"> </a></td><td>Hypoplastic olfactory lobes</td></tr><tr><td style=\"white-space:nowrap\">HP:0011380<a name=\"hpo-HP.580011380\"> </a></td><td>Morphological abnormality of the semicircular canal</td></tr><tr><td style=\"white-space:nowrap\">HP:0000110<a name=\"hpo-HP.580000110\"> </a></td><td>Renal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030025<a name=\"hpo-HP.580030025\"> </a></td><td>Auricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0010044<a name=\"hpo-HP.580010044\"> </a></td><td>Short 4th metacarpal</td></tr><tr><td style=\"white-space:nowrap\">HP:0010047<a name=\"hpo-HP.580010047\"> </a></td><td>Short 5th metacarpal</td></tr><tr><td style=\"white-space:nowrap\">HP:0000201<a name=\"hpo-HP.580000201\"> </a></td><td>Pierre-Robin sequence</td></tr><tr><td style=\"white-space:nowrap\">HP:0100837<a name=\"hpo-HP.580100837\"> </a></td><td>Atrophodermia vermiculata</td></tr><tr><td style=\"white-space:nowrap\">HP:0002673<a name=\"hpo-HP.580002673\"> </a></td><td>Coxa valga</td></tr><tr><td style=\"white-space:nowrap\">HP:0001476<a name=\"hpo-HP.580001476\"> </a></td><td>Delayed closure of the anterior fontanelle</td></tr><tr><td style=\"white-space:nowrap\">HP:0011069<a name=\"hpo-HP.580011069\"> </a></td><td>Increased number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009879<a name=\"hpo-HP.580009879\"> </a></td><td>Simplified gyral pattern</td></tr><tr><td style=\"white-space:nowrap\">HP:0006315<a name=\"hpo-HP.580006315\"> </a></td><td>Single median maxillary incisor</td></tr><tr><td style=\"white-space:nowrap\">HP:0001194<a name=\"hpo-HP.580001194\"> </a></td><td>Abnormalities of placenta or umbilical cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0100767<a name=\"hpo-HP.580100767\"> </a></td><td>Abnormal placenta morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0006543<a name=\"hpo-HP.580006543\"> </a></td><td>Cardiorespiratory arrest</td></tr><tr><td style=\"white-space:nowrap\">HP:0003074<a name=\"hpo-HP.580003074\"> </a></td><td>Hyperglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000842<a name=\"hpo-HP.580000842\"> </a></td><td>Hyperinsulinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011951<a name=\"hpo-HP.580011951\"> </a></td><td>Aspiration pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006528<a name=\"hpo-HP.580006528\"> </a></td><td>Chronic lung disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0002383<a name=\"hpo-HP.580002383\"> </a></td><td>Encephalitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000388<a name=\"hpo-HP.580000388\"> </a></td><td>Otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0002530<a name=\"hpo-HP.580002530\"> </a></td><td>Axial dystonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002780<a name=\"hpo-HP.580002780\"> </a></td><td>Bronchomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008755<a name=\"hpo-HP.580008755\"> </a></td><td>Laryngotracheomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000308<a name=\"hpo-HP.580000308\"> </a></td><td>Microretrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002786<a name=\"hpo-HP.580002786\"> </a></td><td>Tracheobronchomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012389<a name=\"hpo-HP.580012389\"> </a></td><td>Appendicular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011323<a name=\"hpo-HP.580011323\"> </a></td><td>Cleft of chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000417<a name=\"hpo-HP.580000417\"> </a></td><td>Slender nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0001863<a name=\"hpo-HP.580001863\"> </a></td><td>Toe clinodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0008386<a name=\"hpo-HP.580008386\"> </a></td><td>Aplasia/Hypoplasia of the nails</td></tr><tr><td style=\"white-space:nowrap\">HP:0006989<a name=\"hpo-HP.580006989\"> </a></td><td>Dysplastic corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0100954<a name=\"hpo-HP.580100954\"> </a></td><td>Open operculum</td></tr><tr><td style=\"white-space:nowrap\">HP:0004482<a name=\"hpo-HP.580004482\"> </a></td><td>Relative macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:3000033<a name=\"hpo-HP.583000033\"> </a></td><td>Abnormal nasopharyngeal adenoid morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009062<a name=\"hpo-HP.580009062\"> </a></td><td>Infantile axial hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002189<a name=\"hpo-HP.580002189\"> </a></td><td>obsolete Excessive daytime sleepiness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002141<a name=\"hpo-HP.580002141\"> </a></td><td>Gait imbalance</td></tr><tr><td style=\"white-space:nowrap\">HP:0012734<a name=\"hpo-HP.580012734\"> </a></td><td>Ketotic hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005968<a name=\"hpo-HP.580005968\"> </a></td><td>Temperature instability</td></tr><tr><td style=\"white-space:nowrap\">HP:0012538<a name=\"hpo-HP.580012538\"> </a></td><td>Gluten intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0000979<a name=\"hpo-HP.580000979\"> </a></td><td>Purpura</td></tr><tr><td style=\"white-space:nowrap\">HP:0001988<a name=\"hpo-HP.580001988\"> </a></td><td>Recurrent hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001488<a name=\"hpo-HP.580001488\"> </a></td><td>Bilateral ptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011229<a name=\"hpo-HP.580011229\"> </a></td><td>Broad eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0004440<a name=\"hpo-HP.580004440\"> </a></td><td>Coronal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004453<a name=\"hpo-HP.580004453\"> </a></td><td>Overfolding of the superior helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0012547<a name=\"hpo-HP.580012547\"> </a></td><td>Abnormal involuntary eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0100814<a name=\"hpo-HP.580100814\"> </a></td><td>Blue nevus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010751<a name=\"hpo-HP.580010751\"> </a></td><td>Dimple chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0007087<a name=\"hpo-HP.580007087\"> </a></td><td>obsolete Involuntary jerking movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0012498<a name=\"hpo-HP.580012498\"> </a></td><td>Nuchal cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0002472<a name=\"hpo-HP.580002472\"> </a></td><td>Small cerebral cortex</td></tr><tr><td style=\"white-space:nowrap\">HP:0100307<a name=\"hpo-HP.580100307\"> </a></td><td>Cerebellar hemisphere hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002151<a name=\"hpo-HP.580002151\"> </a></td><td>Increased serum lactate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001698<a name=\"hpo-HP.580001698\"> </a></td><td>Pericardial effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0006903<a name=\"hpo-HP.580006903\"> </a></td><td>Congenital peripheral neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006895<a name=\"hpo-HP.580006895\"> </a></td><td>Lower limb hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002744<a name=\"hpo-HP.580002744\"> </a></td><td>Bilateral cleft lip and palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0010664<a name=\"hpo-HP.580010664\"> </a></td><td>Fusion of the left and right thalami</td></tr><tr><td style=\"white-space:nowrap\">HP:0000327<a name=\"hpo-HP.580000327\"> </a></td><td>Hypoplasia of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0000474<a name=\"hpo-HP.580000474\"> </a></td><td>Thickened nuchal skin fold</td></tr><tr><td style=\"white-space:nowrap\">HP:0000105<a name=\"hpo-HP.580000105\"> </a></td><td>Enlarged kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0000113<a name=\"hpo-HP.580000113\"> </a></td><td>Polycystic kidney dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000104<a name=\"hpo-HP.580000104\"> </a></td><td>Renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001362<a name=\"hpo-HP.580001362\"> </a></td><td>Calvarial skull defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0008245<a name=\"hpo-HP.580008245\"> </a></td><td>Pituitary hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001552<a name=\"hpo-HP.580001552\"> </a></td><td>Barrel-shaped chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0006297<a name=\"hpo-HP.580006297\"> </a></td><td>Hypoplasia of dental enamel</td></tr><tr><td style=\"white-space:nowrap\">HP:0100023<a name=\"hpo-HP.580100023\"> </a></td><td>Recurrent hand flapping</td></tr><tr><td style=\"white-space:nowrap\">HP:0005518<a name=\"hpo-HP.580005518\"> </a></td><td>Increased mean corpuscular volume</td></tr><tr><td style=\"white-space:nowrap\">HP:0012418<a name=\"hpo-HP.580012418\"> </a></td><td>Hypoxemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100259<a name=\"hpo-HP.580100259\"> </a></td><td>Postaxial polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010814<a name=\"hpo-HP.580010814\"> </a></td><td>Abnormal position of hair whorl</td></tr><tr><td style=\"white-space:nowrap\">HP:0003764<a name=\"hpo-HP.580003764\"> </a></td><td>Nevus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000445<a name=\"hpo-HP.580000445\"> </a></td><td>Wide nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0010677<a name=\"hpo-HP.580010677\"> </a></td><td>Enuresis nocturna</td></tr><tr><td style=\"white-space:nowrap\">HP:0001510<a name=\"hpo-HP.580001510\"> </a></td><td>Growth delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0012428<a name=\"hpo-HP.580012428\"> </a></td><td>Prominent calcaneus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012471<a name=\"hpo-HP.580012471\"> </a></td><td>Thick vermilion border</td></tr><tr><td style=\"white-space:nowrap\">HP:0007110<a name=\"hpo-HP.580007110\"> </a></td><td>Central hypoventilation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010614<a name=\"hpo-HP.580010614\"> </a></td><td>Fibroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001034<a name=\"hpo-HP.580001034\"> </a></td><td>Hypermelanotic macule</td></tr><tr><td style=\"white-space:nowrap\">HP:0011365<a name=\"hpo-HP.580011365\"> </a></td><td>Patchy hypopigmentation of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0001920<a name=\"hpo-HP.580001920\"> </a></td><td>Renal artery stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002828<a name=\"hpo-HP.580002828\"> </a></td><td>Multiple joint contractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0002144<a name=\"hpo-HP.580002144\"> </a></td><td>Tethered cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0010964<a name=\"hpo-HP.580010964\"> </a></td><td>Abnormal circulating long-chain fatty-acid concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0010536<a name=\"hpo-HP.580010536\"> </a></td><td>Central sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0011262<a name=\"hpo-HP.580011262\"> </a></td><td>Crimped helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0040079<a name=\"hpo-HP.580040079\"> </a></td><td>Irregular dentition</td></tr><tr><td style=\"white-space:nowrap\">HP:0011481<a name=\"hpo-HP.580011481\"> </a></td><td>Abnormal lacrimal duct morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000220<a name=\"hpo-HP.580000220\"> </a></td><td>Velopharyngeal insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002153<a name=\"hpo-HP.580002153\"> </a></td><td>Hyperkalemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002148<a name=\"hpo-HP.580002148\"> </a></td><td>Hypophosphatemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012621<a name=\"hpo-HP.580012621\"> </a></td><td>Persistent cloaca</td></tr><tr><td style=\"white-space:nowrap\">HP:0000867<a name=\"hpo-HP.580000867\"> </a></td><td>Secondary hyperparathyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0003762<a name=\"hpo-HP.580003762\"> </a></td><td>Uterus didelphys</td></tr><tr><td style=\"white-space:nowrap\">HP:0100512<a name=\"hpo-HP.580100512\"> </a></td><td>Low levels of vitamin D</td></tr><tr><td style=\"white-space:nowrap\">HP:0012156<a name=\"hpo-HP.580012156\"> </a></td><td>Hemophagocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008209<a name=\"hpo-HP.580008209\"> </a></td><td>Premature ovarian insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0004349<a name=\"hpo-HP.580004349\"> </a></td><td>Reduced bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0001924<a name=\"hpo-HP.580001924\"> </a></td><td>Sideroblastic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011703<a name=\"hpo-HP.580011703\"> </a></td><td>Sinus tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010609<a name=\"hpo-HP.580010609\"> </a></td><td>Skin tags</td></tr><tr><td style=\"white-space:nowrap\">HP:0002725<a name=\"hpo-HP.580002725\"> </a></td><td>Systemic lupus erythematosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0003193<a name=\"hpo-HP.580003193\"> </a></td><td>Allergic rhinitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006896<a name=\"hpo-HP.580006896\"> </a></td><td>Hypnopompic hallucinations</td></tr><tr><td style=\"white-space:nowrap\">HP:0002524<a name=\"hpo-HP.580002524\"> </a></td><td>Cataplexy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005227<a name=\"hpo-HP.580005227\"> </a></td><td>Adenomatous colonic polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012173<a name=\"hpo-HP.580012173\"> </a></td><td>Orthostatic tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001271<a name=\"hpo-HP.580001271\"> </a></td><td>Polyneuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0009120<a name=\"hpo-HP.580009120\"> </a></td><td>Aplasia/Hypoplasia involving the sinuses</td></tr><tr><td style=\"white-space:nowrap\">HP:0000625<a name=\"hpo-HP.580000625\"> </a></td><td>Eyelid coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0009754<a name=\"hpo-HP.580009754\"> </a></td><td>Fibrous syngnathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012478<a name=\"hpo-HP.580012478\"> </a></td><td>Temporomandibular joint ankylosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001233<a name=\"hpo-HP.580001233\"> </a></td><td>2-3 finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000811<a name=\"hpo-HP.580000811\"> </a></td><td>Abnormal external genitalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005120<a name=\"hpo-HP.580005120\"> </a></td><td>Abnormal cardiac atrium morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008388<a name=\"hpo-HP.580008388\"> </a></td><td>Abnormal toenail morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011467<a name=\"hpo-HP.580011467\"> </a></td><td>Absent gallbladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0010760<a name=\"hpo-HP.580010760\"> </a></td><td>Absent toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001545<a name=\"hpo-HP.580001545\"> </a></td><td>Anteriorly placed anus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001640<a name=\"hpo-HP.580001640\"> </a></td><td>Cardiomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002990<a name=\"hpo-HP.580002990\"> </a></td><td>Fibular aplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004443<a name=\"hpo-HP.580004443\"> </a></td><td>Lambdoidal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008569<a name=\"hpo-HP.580008569\"> </a></td><td>Microtia, second degree</td></tr><tr><td style=\"white-space:nowrap\">HP:0006277<a name=\"hpo-HP.580006277\"> </a></td><td>Pancreatic hyperplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010445<a name=\"hpo-HP.580010445\"> </a></td><td>Primum atrial septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0011640<a name=\"hpo-HP.580011640\"> </a></td><td>Single coronary artery origin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011608<a name=\"hpo-HP.580011608\"> </a></td><td>Type II truncus arteriosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0011327<a name=\"hpo-HP.580011327\"> </a></td><td>Posterior plagiocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0007655<a name=\"hpo-HP.580007655\"> </a></td><td>Eversion of lateral third of lower eyelids</td></tr><tr><td style=\"white-space:nowrap\">HP:0010747<a name=\"hpo-HP.580010747\"> </a></td><td>Medial flaring of the eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0005957<a name=\"hpo-HP.580005957\"> </a></td><td>Breathing dysregulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000992<a name=\"hpo-HP.580000992\"> </a></td><td>Cutaneous photosensitivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0011995<a name=\"hpo-HP.580011995\"> </a></td><td>Atrial septal dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000377<a name=\"hpo-HP.580000377\"> </a></td><td>Abnormality of the pinna</td></tr><tr><td style=\"white-space:nowrap\">HP:0011266<a name=\"hpo-HP.580011266\"> </a></td><td>Microtia, first degree</td></tr><tr><td style=\"white-space:nowrap\">HP:0012650<a name=\"hpo-HP.580012650\"> </a></td><td>Perisylvian polymicrogyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0004970<a name=\"hpo-HP.580004970\"> </a></td><td>Ascending tubular aorta aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0008348<a name=\"hpo-HP.580008348\"> </a></td><td>Decreased circulating IgG2 level</td></tr><tr><td style=\"white-space:nowrap\">HP:0012115<a name=\"hpo-HP.580012115\"> </a></td><td>Hepatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006979<a name=\"hpo-HP.580006979\"> </a></td><td>Sleep-wake cycle disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0008587<a name=\"hpo-HP.580008587\"> </a></td><td>Mild neurosensory hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0006097<a name=\"hpo-HP.580006097\"> </a></td><td>3-4 finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005263<a name=\"hpo-HP.580005263\"> </a></td><td>Gastritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0200043<a name=\"hpo-HP.580200043\"> </a></td><td>Verrucae</td></tr><tr><td style=\"white-space:nowrap\">HP:0009600<a name=\"hpo-HP.580009600\"> </a></td><td>Flexion contracture of thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0010818<a name=\"hpo-HP.580010818\"> </a></td><td>Generalized tonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0002599<a name=\"hpo-HP.580002599\"> </a></td><td>Head titubation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002090<a name=\"hpo-HP.580002090\"> </a></td><td>Pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030423<a name=\"hpo-HP.580030423\"> </a></td><td>Splenic cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0030187<a name=\"hpo-HP.580030187\"> </a></td><td>Titubation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002375<a name=\"hpo-HP.580002375\"> </a></td><td>Hypokinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007166<a name=\"hpo-HP.580007166\"> </a></td><td>Paroxysmal dyskinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003077<a name=\"hpo-HP.580003077\"> </a></td><td>Hyperlipidemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000017<a name=\"hpo-HP.580000017\"> </a></td><td>Nocturia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100555<a name=\"hpo-HP.580100555\"> </a></td><td>Asymmetric growth</td></tr><tr><td style=\"white-space:nowrap\">HP:0011847<a name=\"hpo-HP.580011847\"> </a></td><td>Giant cell tumor of bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0000112<a name=\"hpo-HP.580000112\"> </a></td><td>Nephropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000246<a name=\"hpo-HP.580000246\"> </a></td><td>Sinusitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001012<a name=\"hpo-HP.580001012\"> </a></td><td>Multiple lipomas</td></tr><tr><td style=\"white-space:nowrap\">HP:0000851<a name=\"hpo-HP.580000851\"> </a></td><td>Congenital hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0002345<a name=\"hpo-HP.580002345\"> </a></td><td>Action tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002677<a name=\"hpo-HP.580002677\"> </a></td><td>Small foramen magnum</td></tr><tr><td style=\"white-space:nowrap\">HP:0011947<a name=\"hpo-HP.580011947\"> </a></td><td>Respiratory tract infection</td></tr><tr><td style=\"white-space:nowrap\">HP:0012151<a name=\"hpo-HP.580012151\"> </a></td><td>Hemothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0005988<a name=\"hpo-HP.580005988\"> </a></td><td>Congenital muscular torticollis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002329<a name=\"hpo-HP.580002329\"> </a></td><td>Drowsiness</td></tr><tr><td style=\"white-space:nowrap\">HP:0012395<a name=\"hpo-HP.580012395\"> </a></td><td>Seasonal allergy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011679<a name=\"hpo-HP.580011679\"> </a></td><td>Tetralogy of Fallot with pulmonary stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001864<a name=\"hpo-HP.580001864\"> </a></td><td>Clinodactyly of the 5th toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0006934<a name=\"hpo-HP.580006934\"> </a></td><td>Congenital nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0100355<a name=\"hpo-HP.580100355\"> </a></td><td>Contractures of the distal interphalangeal joint of the 5th toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0007894<a name=\"hpo-HP.580007894\"> </a></td><td>Hypopigmentation of the fundus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012377<a name=\"hpo-HP.580012377\"> </a></td><td>Hemianopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002354<a name=\"hpo-HP.580002354\"> </a></td><td>Memory impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000872<a name=\"hpo-HP.580000872\"> </a></td><td>Hashimoto thyroiditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002519<a name=\"hpo-HP.580002519\"> </a></td><td>Hypnagogic hallucinations</td></tr><tr><td style=\"white-space:nowrap\">HP:0010647<a name=\"hpo-HP.580010647\"> </a></td><td>Abnormal elasticity of skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0002592<a name=\"hpo-HP.580002592\"> </a></td><td>Gastric ulcer</td></tr><tr><td style=\"white-space:nowrap\">HP:0004938<a name=\"hpo-HP.580004938\"> </a></td><td>Tortuous cerebral arteries</td></tr><tr><td style=\"white-space:nowrap\">HP:0004948<a name=\"hpo-HP.580004948\"> </a></td><td>Vascular tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002516<a name=\"hpo-HP.580002516\"> </a></td><td>Increased intracranial pressure</td></tr><tr><td style=\"white-space:nowrap\">HP:0006460<a name=\"hpo-HP.580006460\"> </a></td><td>Increased laxity of ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0002317<a name=\"hpo-HP.580002317\"> </a></td><td>Unsteady gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0000182<a name=\"hpo-HP.580000182\"> </a></td><td>Movement abnormality of the tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0009887<a name=\"hpo-HP.580009887\"> </a></td><td>Abnormality of hair pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005824<a name=\"hpo-HP.580005824\"> </a></td><td>Clinodactyly of the 2nd toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002212<a name=\"hpo-HP.580002212\"> </a></td><td>Curly hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0009803<a name=\"hpo-HP.580009803\"> </a></td><td>Short phalanx of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0000572<a name=\"hpo-HP.580000572\"> </a></td><td>Visual loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0005216<a name=\"hpo-HP.580005216\"> </a></td><td>Impaired mastication</td></tr><tr><td style=\"white-space:nowrap\">HP:0000619<a name=\"hpo-HP.580000619\"> </a></td><td>Impaired convergence</td></tr><tr><td style=\"white-space:nowrap\">HP:0002403<a name=\"hpo-HP.580002403\"> </a></td><td>Positive Romberg sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0008744<a name=\"hpo-HP.580008744\"> </a></td><td>Abnormal aryepiglottic fold morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002374<a name=\"hpo-HP.580002374\"> </a></td><td>Diminished movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0008277<a name=\"hpo-HP.580008277\"> </a></td><td>Abnormal blood zinc concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0012781<a name=\"hpo-HP.580012781\"> </a></td><td>Mid-frequency hearing loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0100758<a name=\"hpo-HP.580100758\"> </a></td><td>Gangrene</td></tr><tr><td style=\"white-space:nowrap\">HP:0003256<a name=\"hpo-HP.580003256\"> </a></td><td>Abnormality of the coagulation cascade</td></tr><tr><td style=\"white-space:nowrap\">HP:0004387<a name=\"hpo-HP.580004387\"> </a></td><td>Enterocolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011029<a name=\"hpo-HP.580011029\"> </a></td><td>Internal hemorrhage</td></tr><tr><td style=\"white-space:nowrap\">HP:0011649<a name=\"hpo-HP.580011649\"> </a></td><td>Patent ductus arteriosus after premature birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0012050<a name=\"hpo-HP.580012050\"> </a></td><td>Anasarca</td></tr><tr><td style=\"white-space:nowrap\">HP:0001683<a name=\"hpo-HP.580001683\"> </a></td><td>Ectopia cordis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011682<a name=\"hpo-HP.580011682\"> </a></td><td>Perimembranous ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0010624<a name=\"hpo-HP.580010624\"> </a></td><td>Aplastic/hypoplastic toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002705<a name=\"hpo-HP.580002705\"> </a></td><td>High, narrow palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0011340<a name=\"hpo-HP.580011340\"> </a></td><td>Incomplete cleft of the upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0011613<a name=\"hpo-HP.580011613\"> </a></td><td>Interrupted aortic arch type B</td></tr><tr><td style=\"white-space:nowrap\">HP:0006167<a name=\"hpo-HP.580006167\"> </a></td><td>Prominent proximal interphalangeal joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0002918<a name=\"hpo-HP.580002918\"> </a></td><td>Hypermagnesemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011937<a name=\"hpo-HP.580011937\"> </a></td><td>Hypoplastic fifth toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0001067<a name=\"hpo-HP.580001067\"> </a></td><td>Neurofibromas</td></tr><tr><td style=\"white-space:nowrap\">HP:0011403<a name=\"hpo-HP.580011403\"> </a></td><td>Abnormal umbilical cord blood vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0003316<a name=\"hpo-HP.580003316\"> </a></td><td>Butterfly vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0002247<a name=\"hpo-HP.580002247\"> </a></td><td>Duodenal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008439<a name=\"hpo-HP.580008439\"> </a></td><td>Lumbar hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0011599<a name=\"hpo-HP.580011599\"> </a></td><td>Mesocardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008467<a name=\"hpo-HP.580008467\"> </a></td><td>Thoracic hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0004626<a name=\"hpo-HP.580004626\"> </a></td><td>Lumbar scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006808<a name=\"hpo-HP.580006808\"> </a></td><td>Cerebral hypomyelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0002926<a name=\"hpo-HP.580002926\"> </a></td><td>Abnormality of thyroid physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0007970<a name=\"hpo-HP.580007970\"> </a></td><td>Congenital ptosis</td></tr></table></div>" - ]; - fhir:CodeSystem.url [ fhir:value "http://purl.obolibrary.org/obo/hp.owl"]; - fhir:CodeSystem.version [ fhir:value "0.2.0"]; - fhir:CodeSystem.name [ fhir:value "HPO"]; - fhir:CodeSystem.title [ fhir:value "Human Phenotype Ontology"]; - fhir:CodeSystem.status [ fhir:value "draft"]; - fhir:CodeSystem.experimental [ fhir:value "false"^^xsd:boolean]; - fhir:CodeSystem.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:CodeSystem.url [ fhir:value "http://purl.obolibrary.org/obo/hp.owl"]; # + fhir:CodeSystem.version [ fhir:value "0.2.0"]; # + fhir:CodeSystem.name [ fhir:value "HPO"]; # + fhir:CodeSystem.title [ fhir:value "Human Phenotype Ontology"]; # + fhir:CodeSystem.status [ fhir:value "draft"]; # + fhir:CodeSystem.experimental [ fhir:value "false"^^xsd:boolean]; # + fhir:CodeSystem.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:CodeSystem.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -37,17 +37,17 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:CodeSystem.description [ fhir:value "The Human Phenotype Ontology (HPO) provides a standardized vocabulary of phenotypic abnormalities encountered in human disease. Please see license of HPO at http://www.human-phenotype-ontology.org"]; + ]; # + fhir:CodeSystem.description [ fhir:value "The Human Phenotype Ontology (HPO) provides a standardized vocabulary of phenotypic abnormalities encountered in human disease. Please see license of HPO at http://www.human-phenotype-ontology.org"]; # fhir:CodeSystem.valueSet [ fhir:value "http://fhir.ncpi-project-forge.io/ValueSet/phenotype-codes"; fhir:link <http://fhir.ncpi-project-forge.io/ValueSet/phenotype-codes> - ]; - fhir:CodeSystem.hierarchyMeaning [ fhir:value "is-a"]; - fhir:CodeSystem.compositional [ fhir:value "false"^^xsd:boolean]; - fhir:CodeSystem.versionNeeded [ fhir:value "false"^^xsd:boolean]; - fhir:CodeSystem.content [ fhir:value "fragment"]; - fhir:CodeSystem.count [ fhir:value "1880"^^xsd:nonNegativeInteger]; + ]; # + fhir:CodeSystem.hierarchyMeaning [ fhir:value "is-a"]; # + fhir:CodeSystem.compositional [ fhir:value "false"^^xsd:boolean]; # + fhir:CodeSystem.versionNeeded [ fhir:value "false"^^xsd:boolean]; # + fhir:CodeSystem.content [ fhir:value "fragment"]; # + fhir:CodeSystem.count [ fhir:value "1880"^^xsd:nonNegativeInteger]; # fhir:CodeSystem.filter [ fhir:index 0; fhir:CodeSystem.filter.code [ fhir:value "root" ]; @@ -72,7 +72,7 @@ fhir:index 0 ]; fhir:CodeSystem.filter.value [ fhir:value "True or false" ] - ]; + ]; # fhir:CodeSystem.property [ fhir:index 0; fhir:CodeSystem.property.code [ fhir:value "parent" ]; @@ -93,7 +93,7 @@ fhir:CodeSystem.property.code [ fhir:value "deprecated" ]; fhir:CodeSystem.property.description [ fhir:value "Indicates if this concept is deprecated." ]; fhir:CodeSystem.property.type [ fhir:value "boolean" ] - ]; + ]; # fhir:CodeSystem.concept [ fhir:index 0; fhir:CodeSystem.concept.code [ fhir:value "HP:0000365" ]; @@ -7614,7 +7614,7 @@ fhir:index 1879; fhir:CodeSystem.concept.code [ fhir:value "HP:0007970" ]; fhir:CodeSystem.concept.display [ fhir:value "Congenital ptosis" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/CodeSystem-hpo.ttl.html b/CodeSystem-hpo.ttl.html index 0d5e8f0a..412abcae 100644 --- a/CodeSystem-hpo.ttl.html +++ b/CodeSystem-hpo.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Human Phenotype Ontology - TTL Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,19 +294,19 @@ <h2 id="root">: Human Phenotype Ontology - TTL Representation</h2> a fhir:CodeSystem; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "hpo"]; + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "hpo"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Properties</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Type</b></td><td><b>Description</b></td></tr><tr><td>parent</td><td>code</td><td>Parent codes.</td></tr><tr><td>imported</td><td>boolean</td><td>Indicates if the concept is imported from another code system.</td></tr><tr><td>root</td><td>boolean</td><td>Indicates if this concept is a root concept (i.e. Thing is equivalent or a direct parent)</td></tr><tr><td>deprecated</td><td>boolean</td><td>Indicates if this concept is deprecated.</td></tr></table><p><b>Filters</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Description</b></td><td><b>operator</b></td><td><b>Value</b></td></tr><tr><td>root</td><td/><td>= </td><td>True or false.</td></tr><tr><td>deprecated</td><td/><td>= </td><td>True or false.</td></tr><tr><td>imported</td><td/><td>= </td><td>True or false</td></tr></table><p>This code system <code>http://purl.obolibrary.org/obo/hp.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">HP:0000365<a name=\"hpo-HP.580000365\"> </a></td><td>Hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002564<a name=\"hpo-HP.580002564\"> </a></td><td>obsolete Malformation of the heart and great vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0001028<a name=\"hpo-HP.580001028\"> </a></td><td>Hemangioma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000476<a name=\"hpo-HP.580000476\"> </a></td><td>Cystic hygroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000568<a name=\"hpo-HP.580000568\"> </a></td><td>Microphthalmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000518<a name=\"hpo-HP.580000518\"> </a></td><td>Cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000612<a name=\"hpo-HP.580000612\"> </a></td><td>Iris coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000567<a name=\"hpo-HP.580000567\"> </a></td><td>Chorioretinal coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000316<a name=\"hpo-HP.580000316\"> </a></td><td>Hypertelorism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000482<a name=\"hpo-HP.580000482\"> </a></td><td>Microcornea</td></tr><tr><td style=\"white-space:nowrap\">HP:0000588<a name=\"hpo-HP.580000588\"> </a></td><td>Optic nerve coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0004426<a name=\"hpo-HP.580004426\"> </a></td><td>Abnormality of the cheek</td></tr><tr><td style=\"white-space:nowrap\">HP:0009125<a name=\"hpo-HP.580009125\"> </a></td><td>Lipodystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002023<a name=\"hpo-HP.580002023\"> </a></td><td>Anal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003468<a name=\"hpo-HP.580003468\"> </a></td><td>Abnormal vertebral morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000545<a name=\"hpo-HP.580000545\"> </a></td><td>Myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000122<a name=\"hpo-HP.580000122\"> </a></td><td>Unilateral renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002143<a name=\"hpo-HP.580002143\"> </a></td><td>Abnormality of the spinal cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0003508<a name=\"hpo-HP.580003508\"> </a></td><td>Proportionate short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0000271<a name=\"hpo-HP.580000271\"> </a></td><td>Abnormality of the face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000637<a name=\"hpo-HP.580000637\"> </a></td><td>Long palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000492<a name=\"hpo-HP.580000492\"> </a></td><td>Abnormal eyelid morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000389<a name=\"hpo-HP.580000389\"> </a></td><td>Chronic otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0000400<a name=\"hpo-HP.580000400\"> </a></td><td>Macrotia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000405<a name=\"hpo-HP.580000405\"> </a></td><td>Conductive hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0012712<a name=\"hpo-HP.580012712\"> </a></td><td>Mild hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0005280<a name=\"hpo-HP.580005280\"> </a></td><td>Depressed nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000431<a name=\"hpo-HP.580000431\"> </a></td><td>Wide nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000319<a name=\"hpo-HP.580000319\"> </a></td><td>Smooth philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000175<a name=\"hpo-HP.580000175\"> </a></td><td>Cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001611<a name=\"hpo-HP.580001611\"> </a></td><td>Nasal speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0002099<a name=\"hpo-HP.580002099\"> </a></td><td>Asthma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001397<a name=\"hpo-HP.580001397\"> </a></td><td>Hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001081<a name=\"hpo-HP.580001081\"> </a></td><td>Cholelithiasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002650<a name=\"hpo-HP.580002650\"> </a></td><td>Scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001212<a name=\"hpo-HP.580001212\"> </a></td><td>Prominent fingertip pads</td></tr><tr><td style=\"white-space:nowrap\">HP:0001328<a name=\"hpo-HP.580001328\"> </a></td><td>Specific learning disability</td></tr><tr><td style=\"white-space:nowrap\">HP:0000824<a name=\"hpo-HP.580000824\"> </a></td><td>Growth hormone deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002607<a name=\"hpo-HP.580002607\"> </a></td><td>Bowel incontinence</td></tr><tr><td style=\"white-space:nowrap\">HP:0100731<a name=\"hpo-HP.580100731\"> </a></td><td>Transverse facial cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0000528<a name=\"hpo-HP.580000528\"> </a></td><td>Anophthalmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000601<a name=\"hpo-HP.580000601\"> </a></td><td>Hypotelorism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000369<a name=\"hpo-HP.580000369\"> </a></td><td>Low-set ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001274<a name=\"hpo-HP.580001274\"> </a></td><td>Agenesis of corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002084<a name=\"hpo-HP.580002084\"> </a></td><td>Encephalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0007033<a name=\"hpo-HP.580007033\"> </a></td><td>Cerebellar dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100336<a name=\"hpo-HP.580100336\"> </a></td><td>Bilateral cleft lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0100337<a name=\"hpo-HP.580100337\"> </a></td><td>Bilateral cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001511<a name=\"hpo-HP.580001511\"> </a></td><td>Intrauterine growth retardation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011451<a name=\"hpo-HP.580011451\"> </a></td><td>Congenital microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000324<a name=\"hpo-HP.580000324\"> </a></td><td>Facial asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0000581<a name=\"hpo-HP.580000581\"> </a></td><td>Blepharophimosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000508<a name=\"hpo-HP.580000508\"> </a></td><td>Ptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008551<a name=\"hpo-HP.580008551\"> </a></td><td>Microtia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001631<a name=\"hpo-HP.580001631\"> </a></td><td>Atrial septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0000085<a name=\"hpo-HP.580000085\"> </a></td><td>Horseshoe kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0011927<a name=\"hpo-HP.580011927\"> </a></td><td>Short digit</td></tr><tr><td style=\"white-space:nowrap\">HP:0001156<a name=\"hpo-HP.580001156\"> </a></td><td>Brachydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002066<a name=\"hpo-HP.580002066\"> </a></td><td>Gait ataxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001250<a name=\"hpo-HP.580001250\"> </a></td><td>Seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001263<a name=\"hpo-HP.580001263\"> </a></td><td>Global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0001562<a name=\"hpo-HP.580001562\"> </a></td><td>Oligohydramnios</td></tr><tr><td style=\"white-space:nowrap\">HP:0001195<a name=\"hpo-HP.580001195\"> </a></td><td>Single umbilical artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0006349<a name=\"hpo-HP.580006349\"> </a></td><td>Agenesis of permanent teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000668<a name=\"hpo-HP.580000668\"> </a></td><td>Hypodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000677<a name=\"hpo-HP.580000677\"> </a></td><td>Oligodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001252<a name=\"hpo-HP.580001252\"> </a></td><td>Muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003429<a name=\"hpo-HP.580003429\"> </a></td><td>CNS hypomyelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0010864<a name=\"hpo-HP.580010864\"> </a></td><td>Intellectual disability, severe</td></tr><tr><td style=\"white-space:nowrap\">HP:0004325<a name=\"hpo-HP.580004325\"> </a></td><td>Decreased body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000666<a name=\"hpo-HP.580000666\"> </a></td><td>Horizontal nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000218<a name=\"hpo-HP.580000218\"> </a></td><td>High palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0010809<a name=\"hpo-HP.580010809\"> </a></td><td>Broad uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000767<a name=\"hpo-HP.580000767\"> </a></td><td>Pectus excavatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0003691<a name=\"hpo-HP.580003691\"> </a></td><td>Scapular winging</td></tr><tr><td style=\"white-space:nowrap\">HP:0002616<a name=\"hpo-HP.580002616\"> </a></td><td>Aortic root aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0001601<a name=\"hpo-HP.580001601\"> </a></td><td>Laryngomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002021<a name=\"hpo-HP.580002021\"> </a></td><td>Pyloric stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001388<a name=\"hpo-HP.580001388\"> </a></td><td>Joint laxity</td></tr><tr><td style=\"white-space:nowrap\">HP:0001187<a name=\"hpo-HP.580001187\"> </a></td><td>Hyperextensibility of the finger joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0000741<a name=\"hpo-HP.580000741\"> </a></td><td>Apathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000817<a name=\"hpo-HP.580000817\"> </a></td><td>Poor eye contact</td></tr><tr><td style=\"white-space:nowrap\">HP:0000821<a name=\"hpo-HP.580000821\"> </a></td><td>Hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000002<a name=\"hpo-HP.580000002\"> </a></td><td>Abnormality of body height</td></tr><tr><td style=\"white-space:nowrap\">HP:0000079<a name=\"hpo-HP.580000079\"> </a></td><td>Abnormality of the urinary system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000164<a name=\"hpo-HP.580000164\"> </a></td><td>Abnormality of the dentition</td></tr><tr><td style=\"white-space:nowrap\">HP:0000364<a name=\"hpo-HP.580000364\"> </a></td><td>Hearing abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000366<a name=\"hpo-HP.580000366\"> </a></td><td>Abnormality of the nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0000464<a name=\"hpo-HP.580000464\"> </a></td><td>Abnormality of the neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000707<a name=\"hpo-HP.580000707\"> </a></td><td>Abnormality of the nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000708<a name=\"hpo-HP.580000708\"> </a></td><td>Behavioral abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000769<a name=\"hpo-HP.580000769\"> </a></td><td>Abnormality of the breast</td></tr><tr><td style=\"white-space:nowrap\">HP:0000772<a name=\"hpo-HP.580000772\"> </a></td><td>Abnormality of the ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000775<a name=\"hpo-HP.580000775\"> </a></td><td>Abnormality of the diaphragm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000889<a name=\"hpo-HP.580000889\"> </a></td><td>Abnormality of the clavicle</td></tr><tr><td style=\"white-space:nowrap\">HP:0000925<a name=\"hpo-HP.580000925\"> </a></td><td>Abnormality of the vertebral column</td></tr><tr><td style=\"white-space:nowrap\">HP:0001080<a name=\"hpo-HP.580001080\"> </a></td><td>Biliary tract abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001392<a name=\"hpo-HP.580001392\"> </a></td><td>Abnormality of the liver</td></tr><tr><td style=\"white-space:nowrap\">HP:0001438<a name=\"hpo-HP.580001438\"> </a></td><td>Abnormal abdomen morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001608<a name=\"hpo-HP.580001608\"> </a></td><td>Abnormality of the voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001627<a name=\"hpo-HP.580001627\"> </a></td><td>Abnormal heart morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001732<a name=\"hpo-HP.580001732\"> </a></td><td>Abnormality of the pancreas</td></tr><tr><td style=\"white-space:nowrap\">HP:0001739<a name=\"hpo-HP.580001739\"> </a></td><td>Abnormality of the nasopharynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0001743<a name=\"hpo-HP.580001743\"> </a></td><td>Abnormality of the spleen</td></tr><tr><td style=\"white-space:nowrap\">HP:0001760<a name=\"hpo-HP.580001760\"> </a></td><td>Abnormal foot morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001871<a name=\"hpo-HP.580001871\"> </a></td><td>Abnormality of blood and blood-forming tissues</td></tr><tr><td style=\"white-space:nowrap\">HP:0002031<a name=\"hpo-HP.580002031\"> </a></td><td>Abnormal esophagus morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002244<a name=\"hpo-HP.580002244\"> </a></td><td>Abnormality of the small intestine</td></tr><tr><td style=\"white-space:nowrap\">HP:0002246<a name=\"hpo-HP.580002246\"> </a></td><td>Abnormality of the duodenum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002250<a name=\"hpo-HP.580002250\"> </a></td><td>Abnormal large intestine morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002644<a name=\"hpo-HP.580002644\"> </a></td><td>Abnormality of pelvic girdle bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002664<a name=\"hpo-HP.580002664\"> </a></td><td>Neoplasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0002715<a name=\"hpo-HP.580002715\"> </a></td><td>Abnormality of the immune system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002814<a name=\"hpo-HP.580002814\"> </a></td><td>Abnormality of the lower limb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002817<a name=\"hpo-HP.580002817\"> </a></td><td>Abnormality of the upper limb</td></tr><tr><td style=\"white-space:nowrap\">HP:0005483<a name=\"hpo-HP.580005483\"> </a></td><td>Abnormal epiglottis morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008777<a name=\"hpo-HP.580008777\"> </a></td><td>Abnormal vocal cord morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011844<a name=\"hpo-HP.580011844\"> </a></td><td>Abnormal appendicular skeleton morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012732<a name=\"hpo-HP.580012732\"> </a></td><td>Anorectal anomaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001508<a name=\"hpo-HP.580001508\"> </a></td><td>Failure to thrive</td></tr><tr><td style=\"white-space:nowrap\">HP:0002902<a name=\"hpo-HP.580002902\"> </a></td><td>Hyponatremia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012236<a name=\"hpo-HP.580012236\"> </a></td><td>Elevated sweat chloride</td></tr><tr><td style=\"white-space:nowrap\">HP:0000347<a name=\"hpo-HP.580000347\"> </a></td><td>Micrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000926<a name=\"hpo-HP.580000926\"> </a></td><td>Platyspondyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001371<a name=\"hpo-HP.580001371\"> </a></td><td>Flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0001875<a name=\"hpo-HP.580001875\"> </a></td><td>Neutropenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001888<a name=\"hpo-HP.580001888\"> </a></td><td>Lymphopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002857<a name=\"hpo-HP.580002857\"> </a></td><td>Genu valgum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002986<a name=\"hpo-HP.580002986\"> </a></td><td>Radial bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003015<a name=\"hpo-HP.580003015\"> </a></td><td>Flared metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003025<a name=\"hpo-HP.580003025\"> </a></td><td>Metaphyseal irregularity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003097<a name=\"hpo-HP.580003097\"> </a></td><td>Short femur</td></tr><tr><td style=\"white-space:nowrap\">HP:0003300<a name=\"hpo-HP.580003300\"> </a></td><td>Ovoid vertebral bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0003307<a name=\"hpo-HP.580003307\"> </a></td><td>Hyperlordosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004209<a name=\"hpo-HP.580004209\"> </a></td><td>Clinodactyly of the 5th finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0004322<a name=\"hpo-HP.580004322\"> </a></td><td>Short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0005792<a name=\"hpo-HP.580005792\"> </a></td><td>Short humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0006248<a name=\"hpo-HP.580006248\"> </a></td><td>Limited wrist movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0000944<a name=\"hpo-HP.580000944\"> </a></td><td>Abnormality of the metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011921<a name=\"hpo-HP.580011921\"> </a></td><td>Exudative pleural effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0003043<a name=\"hpo-HP.580003043\"> </a></td><td>Abnormality of the shoulder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000290<a name=\"hpo-HP.580000290\"> </a></td><td>Abnormality of the forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0005288<a name=\"hpo-HP.580005288\"> </a></td><td>Abnormality of the nares</td></tr><tr><td style=\"white-space:nowrap\">HP:0000234<a name=\"hpo-HP.580000234\"> </a></td><td>Abnormality of the head</td></tr><tr><td style=\"white-space:nowrap\">HP:0004323<a name=\"hpo-HP.580004323\"> </a></td><td>Abnormality of body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000483<a name=\"hpo-HP.580000483\"> </a></td><td>Astigmatism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011003<a name=\"hpo-HP.580011003\"> </a></td><td>High myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000470<a name=\"hpo-HP.580000470\"> </a></td><td>Short neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0030044<a name=\"hpo-HP.580030044\"> </a></td><td>Flexion contracture of digit</td></tr><tr><td style=\"white-space:nowrap\">HP:0100871<a name=\"hpo-HP.580100871\"> </a></td><td>Abnormality of the palm</td></tr><tr><td style=\"white-space:nowrap\">HP:0004334<a name=\"hpo-HP.580004334\"> </a></td><td>Dermal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001845<a name=\"hpo-HP.580001845\"> </a></td><td>Overlapping toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000496<a name=\"hpo-HP.580000496\"> </a></td><td>Abnormality of eye movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0001780<a name=\"hpo-HP.580001780\"> </a></td><td>Abnormality of toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001626<a name=\"hpo-HP.580001626\"> </a></td><td>Abnormality of the cardiovascular system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002086<a name=\"hpo-HP.580002086\"> </a></td><td>Abnormality of the respiratory system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000818<a name=\"hpo-HP.580000818\"> </a></td><td>Abnormality of the endocrine system</td></tr><tr><td style=\"white-space:nowrap\">HP:0012372<a name=\"hpo-HP.580012372\"> </a></td><td>Abnormal eye morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009473<a name=\"hpo-HP.580009473\"> </a></td><td>Joint contracture of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0003199<a name=\"hpo-HP.580003199\"> </a></td><td>Decreased muscle mass</td></tr><tr><td style=\"white-space:nowrap\">HP:0003202<a name=\"hpo-HP.580003202\"> </a></td><td>Skeletal muscle atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003551<a name=\"hpo-HP.580003551\"> </a></td><td>Difficulty climbing stairs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002355<a name=\"hpo-HP.580002355\"> </a></td><td>Difficulty walking</td></tr><tr><td style=\"white-space:nowrap\">HP:0003546<a name=\"hpo-HP.580003546\"> </a></td><td>Exercise intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0003325<a name=\"hpo-HP.580003325\"> </a></td><td>Limb-girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003701<a name=\"hpo-HP.580003701\"> </a></td><td>Proximal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003547<a name=\"hpo-HP.580003547\"> </a></td><td>Shoulder girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0007340<a name=\"hpo-HP.580007340\"> </a></td><td>Lower limb muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002168<a name=\"hpo-HP.580002168\"> </a></td><td>Scanning speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0001265<a name=\"hpo-HP.580001265\"> </a></td><td>Hyporeflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001284<a name=\"hpo-HP.580001284\"> </a></td><td>Areflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003477<a name=\"hpo-HP.580003477\"> </a></td><td>Peripheral axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000924<a name=\"hpo-HP.580000924\"> </a></td><td>Abnormality of the skeletal system</td></tr><tr><td style=\"white-space:nowrap\">HP:0001291<a name=\"hpo-HP.580001291\"> </a></td><td>Abnormal cranial nerve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003687<a name=\"hpo-HP.580003687\"> </a></td><td>Centrally nucleated skeletal muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0001324<a name=\"hpo-HP.580001324\"> </a></td><td>Muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002515<a name=\"hpo-HP.580002515\"> </a></td><td>Waddling gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0100280<a name=\"hpo-HP.580100280\"> </a></td><td>Crohn's disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0002631<a name=\"hpo-HP.580002631\"> </a></td><td>obsolete Dilatation of ascending aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0100026<a name=\"hpo-HP.580100026\"> </a></td><td>Arteriovenous malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002637<a name=\"hpo-HP.580002637\"> </a></td><td>Cerebral ischemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002619<a name=\"hpo-HP.580002619\"> </a></td><td>Varicose veins</td></tr><tr><td style=\"white-space:nowrap\">HP:0001159<a name=\"hpo-HP.580001159\"> </a></td><td>Syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002069<a name=\"hpo-HP.580002069\"> </a></td><td>Bilateral tonic-clonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000977<a name=\"hpo-HP.580000977\"> </a></td><td>Soft skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010648<a name=\"hpo-HP.580010648\"> </a></td><td>Dermal translucency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000978<a name=\"hpo-HP.580000978\"> </a></td><td>Bruising susceptibility</td></tr><tr><td style=\"white-space:nowrap\">HP:0001956<a name=\"hpo-HP.580001956\"> </a></td><td>Truncal obesity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000189<a name=\"hpo-HP.580000189\"> </a></td><td>Narrow palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000678<a name=\"hpo-HP.580000678\"> </a></td><td>Dental crowding</td></tr><tr><td style=\"white-space:nowrap\">HP:0002870<a name=\"hpo-HP.580002870\"> </a></td><td>Obstructive sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001763<a name=\"hpo-HP.580001763\"> </a></td><td>Pes planus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000782<a name=\"hpo-HP.580000782\"> </a></td><td>Abnormality of the scapula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001600<a name=\"hpo-HP.580001600\"> </a></td><td>Abnormality of the larynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0002088<a name=\"hpo-HP.580002088\"> </a></td><td>Abnormal lung morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011407<a name=\"hpo-HP.580011407\"> </a></td><td>Proportionate tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0000541<a name=\"hpo-HP.580000541\"> </a></td><td>Retinal detachment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001373<a name=\"hpo-HP.580001373\"> </a></td><td>Joint dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000938<a name=\"hpo-HP.580000938\"> </a></td><td>Osteopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002942<a name=\"hpo-HP.580002942\"> </a></td><td>Thoracic kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001840<a name=\"hpo-HP.580001840\"> </a></td><td>Metatarsus adductus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001844<a name=\"hpo-HP.580001844\"> </a></td><td>Abnormality of the hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0001765<a name=\"hpo-HP.580001765\"> </a></td><td>Hammertoe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000606<a name=\"hpo-HP.580000606\"> </a></td><td>Abnormality of the periorbital region</td></tr><tr><td style=\"white-space:nowrap\">HP:0002757<a name=\"hpo-HP.580002757\"> </a></td><td>Recurrent fractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0000647<a name=\"hpo-HP.580000647\"> </a></td><td>Sclerocornea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001166<a name=\"hpo-HP.580001166\"> </a></td><td>Arachnodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005490<a name=\"hpo-HP.580005490\"> </a></td><td>Postnatal macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0011363<a name=\"hpo-HP.580011363\"> </a></td><td>Abnormality of hair growth rate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000276<a name=\"hpo-HP.580000276\"> </a></td><td>Long face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000275<a name=\"hpo-HP.580000275\"> </a></td><td>Narrow face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000337<a name=\"hpo-HP.580000337\"> </a></td><td>Broad forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0002267<a name=\"hpo-HP.580002267\"> </a></td><td>Exaggerated startle response</td></tr><tr><td style=\"white-space:nowrap\">HP:0002187<a name=\"hpo-HP.580002187\"> </a></td><td>Intellectual disability, profound</td></tr><tr><td style=\"white-space:nowrap\">HP:0000728<a name=\"hpo-HP.580000728\"> </a></td><td>Impaired ability to form peer relationships</td></tr><tr><td style=\"white-space:nowrap\">HP:0000733<a name=\"hpo-HP.580000733\"> </a></td><td>Stereotypy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000739<a name=\"hpo-HP.580000739\"> </a></td><td>Anxiety</td></tr><tr><td style=\"white-space:nowrap\">HP:0000929<a name=\"hpo-HP.580000929\"> </a></td><td>Abnormal skull morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001965<a name=\"hpo-HP.580001965\"> </a></td><td>Abnormal scalp morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100538<a name=\"hpo-HP.580100538\"> </a></td><td>Abnormality of the supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0000309<a name=\"hpo-HP.580000309\"> </a></td><td>Abnormality of the midface</td></tr><tr><td style=\"white-space:nowrap\">HP:0000277<a name=\"hpo-HP.580000277\"> </a></td><td>Abnormality of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000765<a name=\"hpo-HP.580000765\"> </a></td><td>Abnormality of the thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0100008<a name=\"hpo-HP.580100008\"> </a></td><td>Schwannoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0030038<a name=\"hpo-HP.580030038\"> </a></td><td>Enchondroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0100777<a name=\"hpo-HP.580100777\"> </a></td><td>Exostoses</td></tr><tr><td style=\"white-space:nowrap\">HP:0011663<a name=\"hpo-HP.580011663\"> </a></td><td>Right ventricular cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011675<a name=\"hpo-HP.580011675\"> </a></td><td>Arrhythmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001962<a name=\"hpo-HP.580001962\"> </a></td><td>Palpitations</td></tr><tr><td style=\"white-space:nowrap\">HP:0001279<a name=\"hpo-HP.580001279\"> </a></td><td>Syncope</td></tr><tr><td style=\"white-space:nowrap\">HP:0004756<a name=\"hpo-HP.580004756\"> </a></td><td>Ventricular tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000252<a name=\"hpo-HP.580000252\"> </a></td><td>Microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000303<a name=\"hpo-HP.580000303\"> </a></td><td>Mandibular prognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000664<a name=\"hpo-HP.580000664\"> </a></td><td>Synophrys</td></tr><tr><td style=\"white-space:nowrap\">HP:0001609<a name=\"hpo-HP.580001609\"> </a></td><td>Hoarse voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0002558<a name=\"hpo-HP.580002558\"> </a></td><td>Supernumerary nipple</td></tr><tr><td style=\"white-space:nowrap\">HP:0001634<a name=\"hpo-HP.580001634\"> </a></td><td>Mitral valve prolapse</td></tr><tr><td style=\"white-space:nowrap\">HP:0000028<a name=\"hpo-HP.580000028\"> </a></td><td>Cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000973<a name=\"hpo-HP.580000973\"> </a></td><td>Cutis laxa</td></tr><tr><td style=\"white-space:nowrap\">HP:0001518<a name=\"hpo-HP.580001518\"> </a></td><td>Small for gestational age</td></tr><tr><td style=\"white-space:nowrap\">HP:0000527<a name=\"hpo-HP.580000527\"> </a></td><td>Long eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002808<a name=\"hpo-HP.580002808\"> </a></td><td>Kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000248<a name=\"hpo-HP.580000248\"> </a></td><td>Brachycephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000505<a name=\"hpo-HP.580000505\"> </a></td><td>Visual impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000512<a name=\"hpo-HP.580000512\"> </a></td><td>Abnormal electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:0000517<a name=\"hpo-HP.580000517\"> </a></td><td>Abnormality of the lens</td></tr><tr><td style=\"white-space:nowrap\">HP:0000529<a name=\"hpo-HP.580000529\"> </a></td><td>Progressive visual loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0000586<a name=\"hpo-HP.580000586\"> </a></td><td>Shallow orbits</td></tr><tr><td style=\"white-space:nowrap\">HP:0000603<a name=\"hpo-HP.580000603\"> </a></td><td>Central scotoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000939<a name=\"hpo-HP.580000939\"> </a></td><td>Osteoporosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001377<a name=\"hpo-HP.580001377\"> </a></td><td>Limited elbow extension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001387<a name=\"hpo-HP.580001387\"> </a></td><td>Joint stiffness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001822<a name=\"hpo-HP.580001822\"> </a></td><td>Hallux valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0002657<a name=\"hpo-HP.580002657\"> </a></td><td>Spondylometaphyseal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003026<a name=\"hpo-HP.580003026\"> </a></td><td>Short long bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0006462<a name=\"hpo-HP.580006462\"> </a></td><td>Generalized bone demineralization</td></tr><tr><td style=\"white-space:nowrap\">HP:0008873<a name=\"hpo-HP.580008873\"> </a></td><td>Disproportionate short-limb short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0008905<a name=\"hpo-HP.580008905\"> </a></td><td>Rhizomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008922<a name=\"hpo-HP.580008922\"> </a></td><td>Childhood-onset short-trunk short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0200020<a name=\"hpo-HP.580200020\"> </a></td><td>Corneal erosion</td></tr><tr><td style=\"white-space:nowrap\">HP:0001172<a name=\"hpo-HP.580001172\"> </a></td><td>Abnormal thumb morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002286<a name=\"hpo-HP.580002286\"> </a></td><td>Fair hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0010719<a name=\"hpo-HP.580010719\"> </a></td><td>Abnormality of hair texture</td></tr><tr><td style=\"white-space:nowrap\">HP:0010720<a name=\"hpo-HP.580010720\"> </a></td><td>Abnormal hair pattern</td></tr><tr><td style=\"white-space:nowrap\">HP:0001635<a name=\"hpo-HP.580001635\"> </a></td><td>Congestive heart failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001644<a name=\"hpo-HP.580001644\"> </a></td><td>Dilated cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001663<a name=\"hpo-HP.580001663\"> </a></td><td>Ventricular fibrillation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011712<a name=\"hpo-HP.580011712\"> </a></td><td>Right bundle branch block</td></tr><tr><td style=\"white-space:nowrap\">HP:0000272<a name=\"hpo-HP.580000272\"> </a></td><td>Malar flattening</td></tr><tr><td style=\"white-space:nowrap\">HP:0000286<a name=\"hpo-HP.580000286\"> </a></td><td>Epicanthus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000322<a name=\"hpo-HP.580000322\"> </a></td><td>Short philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000463<a name=\"hpo-HP.580000463\"> </a></td><td>Anteverted nares</td></tr><tr><td style=\"white-space:nowrap\">HP:0000494<a name=\"hpo-HP.580000494\"> </a></td><td>Downslanted palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0000543<a name=\"hpo-HP.580000543\"> </a></td><td>Optic disc pallor</td></tr><tr><td style=\"white-space:nowrap\">HP:0000699<a name=\"hpo-HP.580000699\"> </a></td><td>Diastema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000773<a name=\"hpo-HP.580000773\"> </a></td><td>Short ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000887<a name=\"hpo-HP.580000887\"> </a></td><td>Cupped ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000946<a name=\"hpo-HP.580000946\"> </a></td><td>Hypoplastic ilia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000954<a name=\"hpo-HP.580000954\"> </a></td><td>Single transverse palmar crease</td></tr><tr><td style=\"white-space:nowrap\">HP:0001182<a name=\"hpo-HP.580001182\"> </a></td><td>Tapered finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0001537<a name=\"hpo-HP.580001537\"> </a></td><td>Umbilical hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002007<a name=\"hpo-HP.580002007\"> </a></td><td>Frontal bossing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002980<a name=\"hpo-HP.580002980\"> </a></td><td>Femoral bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002982<a name=\"hpo-HP.580002982\"> </a></td><td>Tibial bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003021<a name=\"hpo-HP.580003021\"> </a></td><td>Metaphyseal cupping</td></tr><tr><td style=\"white-space:nowrap\">HP:0005011<a name=\"hpo-HP.580005011\"> </a></td><td>Mesomelic arm shortening</td></tr><tr><td style=\"white-space:nowrap\">HP:0008803<a name=\"hpo-HP.580008803\"> </a></td><td>obsolete Narrow sacroiliac notch</td></tr><tr><td style=\"white-space:nowrap\">HP:0009117<a name=\"hpo-HP.580009117\"> </a></td><td>Aplasia/Hypoplasia of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0011220<a name=\"hpo-HP.580011220\"> </a></td><td>Prominent forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0012801<a name=\"hpo-HP.580012801\"> </a></td><td>Narrow jaw</td></tr><tr><td style=\"white-space:nowrap\">HP:0000243<a name=\"hpo-HP.580000243\"> </a></td><td>Trigonocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000358<a name=\"hpo-HP.580000358\"> </a></td><td>Posteriorly rotated ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0000411<a name=\"hpo-HP.580000411\"> </a></td><td>Protruding ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000646<a name=\"hpo-HP.580000646\"> </a></td><td>Amblyopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002812<a name=\"hpo-HP.580002812\"> </a></td><td>Coxa vara</td></tr><tr><td style=\"white-space:nowrap\">HP:0002970<a name=\"hpo-HP.580002970\"> </a></td><td>Genu varum</td></tr><tr><td style=\"white-space:nowrap\">HP:0012775<a name=\"hpo-HP.580012775\"> </a></td><td>Stellate iris</td></tr><tr><td style=\"white-space:nowrap\">HP:0000278<a name=\"hpo-HP.580000278\"> </a></td><td>Retrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0009796<a name=\"hpo-HP.580009796\"> </a></td><td>Branchial cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0002474<a name=\"hpo-HP.580002474\"> </a></td><td>Expressive language delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0007018<a name=\"hpo-HP.580007018\"> </a></td><td>Attention deficit hyperactivity disorder</td></tr><tr><td style=\"white-space:nowrap\">HP:0003198<a name=\"hpo-HP.580003198\"> </a></td><td>Myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003324<a name=\"hpo-HP.580003324\"> </a></td><td>Generalized muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003552<a name=\"hpo-HP.580003552\"> </a></td><td>Muscle stiffness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003554<a name=\"hpo-HP.580003554\"> </a></td><td>Type 2 muscle fiber atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003557<a name=\"hpo-HP.580003557\"> </a></td><td>Increased variability in muscle fiber diameter</td></tr><tr><td style=\"white-space:nowrap\">HP:0009025<a name=\"hpo-HP.580009025\"> </a></td><td>Increased connective tissue</td></tr><tr><td style=\"white-space:nowrap\">HP:0003635<a name=\"hpo-HP.580003635\"> </a></td><td>Loss of subcutaneous adipose tissue in limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002597<a name=\"hpo-HP.580002597\"> </a></td><td>Abnormality of the vasculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0001649<a name=\"hpo-HP.580001649\"> </a></td><td>Tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001638<a name=\"hpo-HP.580001638\"> </a></td><td>Cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001654<a name=\"hpo-HP.580001654\"> </a></td><td>Abnormal heart valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001671<a name=\"hpo-HP.580001671\"> </a></td><td>Abnormal cardiac septum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000103<a name=\"hpo-HP.580000103\"> </a></td><td>Polyuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0000114<a name=\"hpo-HP.580000114\"> </a></td><td>Proximal tubulopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001878<a name=\"hpo-HP.580001878\"> </a></td><td>Hemolytic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001931<a name=\"hpo-HP.580001931\"> </a></td><td>Hypochromic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001935<a name=\"hpo-HP.580001935\"> </a></td><td>Microcytic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001959<a name=\"hpo-HP.580001959\"> </a></td><td>Polydipsia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001994<a name=\"hpo-HP.580001994\"> </a></td><td>Renal Fanconi syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002134<a name=\"hpo-HP.580002134\"> </a></td><td>Abnormality of the basal ganglia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002188<a name=\"hpo-HP.580002188\"> </a></td><td>Delayed CNS myelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0002908<a name=\"hpo-HP.580002908\"> </a></td><td>Conjugated hyperbilirubinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003774<a name=\"hpo-HP.580003774\"> </a></td><td>Stage 5 chronic kidney disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0010700<a name=\"hpo-HP.580010700\"> </a></td><td>obsolete Total cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000193<a name=\"hpo-HP.580000193\"> </a></td><td>Bifid uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000219<a name=\"hpo-HP.580000219\"> </a></td><td>Thin upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000426<a name=\"hpo-HP.580000426\"> </a></td><td>Prominent nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000452<a name=\"hpo-HP.580000452\"> </a></td><td>Choanal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000490<a name=\"hpo-HP.580000490\"> </a></td><td>Deeply set eye</td></tr><tr><td style=\"white-space:nowrap\">HP:0000540<a name=\"hpo-HP.580000540\"> </a></td><td>Hypermetropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000579<a name=\"hpo-HP.580000579\"> </a></td><td>Nasolacrimal duct obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0000684<a name=\"hpo-HP.580000684\"> </a></td><td>Delayed eruption of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000960<a name=\"hpo-HP.580000960\"> </a></td><td>Sacral dimple</td></tr><tr><td style=\"white-space:nowrap\">HP:0000998<a name=\"hpo-HP.580000998\"> </a></td><td>Hypertrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001643<a name=\"hpo-HP.580001643\"> </a></td><td>Patent ductus arteriosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010813<a name=\"hpo-HP.580010813\"> </a></td><td>Abnormal number of hair whorls</td></tr><tr><td style=\"white-space:nowrap\">HP:0012384<a name=\"hpo-HP.580012384\"> </a></td><td>Rhinitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012745<a name=\"hpo-HP.580012745\"> </a></td><td>Short palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000359<a name=\"hpo-HP.580000359\"> </a></td><td>Abnormality of the inner ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000429<a name=\"hpo-HP.580000429\"> </a></td><td>Abnormality of the nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000436<a name=\"hpo-HP.580000436\"> </a></td><td>Abnormality of the nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000499<a name=\"hpo-HP.580000499\"> </a></td><td>Abnormal eyelash morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000534<a name=\"hpo-HP.580000534\"> </a></td><td>Abnormal eyebrow morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000951<a name=\"hpo-HP.580000951\"> </a></td><td>Abnormality of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001000<a name=\"hpo-HP.580001000\"> </a></td><td>Abnormality of skin pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001597<a name=\"hpo-HP.580001597\"> </a></td><td>Abnormality of the nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0006483<a name=\"hpo-HP.580006483\"> </a></td><td>Abnormal number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009929<a name=\"hpo-HP.580009929\"> </a></td><td>Abnormality of the columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0011119<a name=\"hpo-HP.580011119\"> </a></td><td>Abnormality of the nasal dorsum</td></tr><tr><td style=\"white-space:nowrap\">HP:0012808<a name=\"hpo-HP.580012808\"> </a></td><td>Abnormal nasal base</td></tr><tr><td style=\"white-space:nowrap\">HP:0100490<a name=\"hpo-HP.580100490\"> </a></td><td>Camptodactyly of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0000964<a name=\"hpo-HP.580000964\"> </a></td><td>Eczema</td></tr><tr><td style=\"white-space:nowrap\">HP:0004442<a name=\"hpo-HP.580004442\"> </a></td><td>Sagittal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000414<a name=\"hpo-HP.580000414\"> </a></td><td>Bulbous nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0003180<a name=\"hpo-HP.580003180\"> </a></td><td>Flat acetabular roof</td></tr><tr><td style=\"white-space:nowrap\">HP:0000422<a name=\"hpo-HP.580000422\"> </a></td><td>Abnormality of the nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000614<a name=\"hpo-HP.580000614\"> </a></td><td>Abnormal nasolacrimal system morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001167<a name=\"hpo-HP.580001167\"> </a></td><td>Abnormality of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0001595<a name=\"hpo-HP.580001595\"> </a></td><td>Abnormal hair morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012373<a name=\"hpo-HP.580012373\"> </a></td><td>Abnormal eye physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001655<a name=\"hpo-HP.580001655\"> </a></td><td>Patent foramen ovale</td></tr><tr><td style=\"white-space:nowrap\">HP:0001647<a name=\"hpo-HP.580001647\"> </a></td><td>Bicuspid aortic valve</td></tr><tr><td style=\"white-space:nowrap\">HP:0000574<a name=\"hpo-HP.580000574\"> </a></td><td>Thick eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0001169<a name=\"hpo-HP.580001169\"> </a></td><td>Broad palm</td></tr><tr><td style=\"white-space:nowrap\">HP:0006471<a name=\"hpo-HP.580006471\"> </a></td><td>Fixed elbow flexion</td></tr><tr><td style=\"white-space:nowrap\">HP:0008689<a name=\"hpo-HP.580008689\"> </a></td><td>Bilateral cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011304<a name=\"hpo-HP.580011304\"> </a></td><td>Broad thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0005110<a name=\"hpo-HP.580005110\"> </a></td><td>Atrial fibrillation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001633<a name=\"hpo-HP.580001633\"> </a></td><td>Abnormal mitral valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001641<a name=\"hpo-HP.580001641\"> </a></td><td>Abnormal pulmonary valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001702<a name=\"hpo-HP.580001702\"> </a></td><td>Abnormal tricuspid valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000012<a name=\"hpo-HP.580000012\"> </a></td><td>Urinary urgency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000020<a name=\"hpo-HP.580000020\"> </a></td><td>Urinary incontinence</td></tr><tr><td style=\"white-space:nowrap\">HP:0000131<a name=\"hpo-HP.580000131\"> </a></td><td>Uterine leiomyoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000132<a name=\"hpo-HP.580000132\"> </a></td><td>Menorrhagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000138<a name=\"hpo-HP.580000138\"> </a></td><td>Ovarian cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0000853<a name=\"hpo-HP.580000853\"> </a></td><td>Goiter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000953<a name=\"hpo-HP.580000953\"> </a></td><td>Hyperpigmentation of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001061<a name=\"hpo-HP.580001061\"> </a></td><td>Acne</td></tr><tr><td style=\"white-space:nowrap\">HP:0002315<a name=\"hpo-HP.580002315\"> </a></td><td>Headache</td></tr><tr><td style=\"white-space:nowrap\">HP:0004324<a name=\"hpo-HP.580004324\"> </a></td><td>Increased body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000069<a name=\"hpo-HP.580000069\"> </a></td><td>Abnormality of the ureter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000077<a name=\"hpo-HP.580000077\"> </a></td><td>Abnormality of the kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0000759<a name=\"hpo-HP.580000759\"> </a></td><td>Abnormal peripheral nervous system morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008069<a name=\"hpo-HP.580008069\"> </a></td><td>Neoplasm of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011276<a name=\"hpo-HP.580011276\"> </a></td><td>Vascular skin abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000705<a name=\"hpo-HP.580000705\"> </a></td><td>Amelogenesis imperfecta</td></tr><tr><td style=\"white-space:nowrap\">HP:0001256<a name=\"hpo-HP.580001256\"> </a></td><td>Intellectual disability, mild</td></tr><tr><td style=\"white-space:nowrap\">HP:0000325<a name=\"hpo-HP.580000325\"> </a></td><td>Triangular face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000160<a name=\"hpo-HP.580000160\"> </a></td><td>Narrow mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009487<a name=\"hpo-HP.580009487\"> </a></td><td>Ulnar deviation of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0001249<a name=\"hpo-HP.580001249\"> </a></td><td>Intellectual disability</td></tr><tr><td style=\"white-space:nowrap\">HP:0008064<a name=\"hpo-HP.580008064\"> </a></td><td>Ichthyosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000311<a name=\"hpo-HP.580000311\"> </a></td><td>Round face</td></tr><tr><td style=\"white-space:nowrap\">HP:0001653<a name=\"hpo-HP.580001653\"> </a></td><td>Mitral regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001771<a name=\"hpo-HP.580001771\"> </a></td><td>Achilles tendon contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0012032<a name=\"hpo-HP.580012032\"> </a></td><td>Lipoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0012368<a name=\"hpo-HP.580012368\"> </a></td><td>Flat face</td></tr><tr><td style=\"white-space:nowrap\">HP:0030053<a name=\"hpo-HP.580030053\"> </a></td><td>Stiff skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011124<a name=\"hpo-HP.580011124\"> </a></td><td>Abnormality of epidermal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011097<a name=\"hpo-HP.580011097\"> </a></td><td>Epileptic spasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000407<a name=\"hpo-HP.580000407\"> </a></td><td>Sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000331<a name=\"hpo-HP.580000331\"> </a></td><td>Short chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000340<a name=\"hpo-HP.580000340\"> </a></td><td>Sloping forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0000486<a name=\"hpo-HP.580000486\"> </a></td><td>Strabismus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000713<a name=\"hpo-HP.580000713\"> </a></td><td>Agitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000802<a name=\"hpo-HP.580000802\"> </a></td><td>Impotence</td></tr><tr><td style=\"white-space:nowrap\">HP:0001272<a name=\"hpo-HP.580001272\"> </a></td><td>Cerebellar atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001276<a name=\"hpo-HP.580001276\"> </a></td><td>Hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001321<a name=\"hpo-HP.580001321\"> </a></td><td>Cerebellar hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001322<a name=\"hpo-HP.580001322\"> </a></td><td>obsolete Brain very small</td></tr><tr><td style=\"white-space:nowrap\">HP:0002061<a name=\"hpo-HP.580002061\"> </a></td><td>Lower limb spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002529<a name=\"hpo-HP.580002529\"> </a></td><td>Neuronal loss in central nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002540<a name=\"hpo-HP.580002540\"> </a></td><td>Inability to walk</td></tr><tr><td style=\"white-space:nowrap\">HP:0005484<a name=\"hpo-HP.580005484\"> </a></td><td>Postnatal microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0012850<a name=\"hpo-HP.580012850\"> </a></td><td>Small intestinal dysmotility</td></tr><tr><td style=\"white-space:nowrap\">HP:0000504<a name=\"hpo-HP.580000504\"> </a></td><td>Abnormality of vision</td></tr><tr><td style=\"white-space:nowrap\">HP:0002118<a name=\"hpo-HP.580002118\"> </a></td><td>Abnormality of the cerebral ventricles</td></tr><tr><td style=\"white-space:nowrap\">HP:0002363<a name=\"hpo-HP.580002363\"> </a></td><td>Abnormality of brainstem morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0010651<a name=\"hpo-HP.580010651\"> </a></td><td>Abnormal meningeal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100024<a name=\"hpo-HP.580100024\"> </a></td><td>Conspicuously happy disposition</td></tr><tr><td style=\"white-space:nowrap\">HP:0002538<a name=\"hpo-HP.580002538\"> </a></td><td>Abnormality of the cerebral cortex</td></tr><tr><td style=\"white-space:nowrap\">HP:0000054<a name=\"hpo-HP.580000054\"> </a></td><td>Micropenis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000215<a name=\"hpo-HP.580000215\"> </a></td><td>Thick upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000293<a name=\"hpo-HP.580000293\"> </a></td><td>Full cheeks</td></tr><tr><td style=\"white-space:nowrap\">HP:0000349<a name=\"hpo-HP.580000349\"> </a></td><td>Widow's peak</td></tr><tr><td style=\"white-space:nowrap\">HP:0000444<a name=\"hpo-HP.580000444\"> </a></td><td>Convex nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000506<a name=\"hpo-HP.580000506\"> </a></td><td>Telecanthus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000592<a name=\"hpo-HP.580000592\"> </a></td><td>Blue sclerae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000691<a name=\"hpo-HP.580000691\"> </a></td><td>Microdontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000698<a name=\"hpo-HP.580000698\"> </a></td><td>Conical tooth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002000<a name=\"hpo-HP.580002000\"> </a></td><td>Short columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0002097<a name=\"hpo-HP.580002097\"> </a></td><td>Emphysema</td></tr><tr><td style=\"white-space:nowrap\">HP:0002209<a name=\"hpo-HP.580002209\"> </a></td><td>Sparse scalp hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002816<a name=\"hpo-HP.580002816\"> </a></td><td>Genu recurvatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0005116<a name=\"hpo-HP.580005116\"> </a></td><td>Arterial tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0007957<a name=\"hpo-HP.580007957\"> </a></td><td>Corneal opacity</td></tr><tr><td style=\"white-space:nowrap\">HP:0008070<a name=\"hpo-HP.580008070\"> </a></td><td>Sparse hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0009623<a name=\"hpo-HP.580009623\"> </a></td><td>Proximal placement of thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0010055<a name=\"hpo-HP.580010055\"> </a></td><td>Broad hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0011318<a name=\"hpo-HP.580011318\"> </a></td><td>Bicoronal synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011968<a name=\"hpo-HP.580011968\"> </a></td><td>Feeding difficulties</td></tr><tr><td style=\"white-space:nowrap\">HP:0200067<a name=\"hpo-HP.580200067\"> </a></td><td>Recurrent spontaneous abortion</td></tr><tr><td style=\"white-space:nowrap\">HP:0011819<a name=\"hpo-HP.580011819\"> </a></td><td>Submucous cleft soft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000268<a name=\"hpo-HP.580000268\"> </a></td><td>Dolichocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0003302<a name=\"hpo-HP.580003302\"> </a></td><td>Spondylolisthesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000582<a name=\"hpo-HP.580000582\"> </a></td><td>Upslanted palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000952<a name=\"hpo-HP.580000952\"> </a></td><td>Jaundice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001298<a name=\"hpo-HP.580001298\"> </a></td><td>Encephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001396<a name=\"hpo-HP.580001396\"> </a></td><td>Cholestasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002059<a name=\"hpo-HP.580002059\"> </a></td><td>Cerebral atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002171<a name=\"hpo-HP.580002171\"> </a></td><td>Gliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002240<a name=\"hpo-HP.580002240\"> </a></td><td>Hepatomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002353<a name=\"hpo-HP.580002353\"> </a></td><td>EEG abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0002446<a name=\"hpo-HP.580002446\"> </a></td><td>Astrocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003287<a name=\"hpo-HP.580003287\"> </a></td><td>Abnormality of mitochondrial metabolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011449<a name=\"hpo-HP.580011449\"> </a></td><td>Knee clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012852<a name=\"hpo-HP.580012852\"> </a></td><td>Hepatic bridging fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100626<a name=\"hpo-HP.580100626\"> </a></td><td>Chronic hepatic failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000385<a name=\"hpo-HP.580000385\"> </a></td><td>Small earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0009748<a name=\"hpo-HP.580009748\"> </a></td><td>Large earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000157<a name=\"hpo-HP.580000157\"> </a></td><td>Abnormality of the tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0000172<a name=\"hpo-HP.580000172\"> </a></td><td>Abnormality of the uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000174<a name=\"hpo-HP.580000174\"> </a></td><td>Abnormal palate morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000306<a name=\"hpo-HP.580000306\"> </a></td><td>Abnormality of the chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0004408<a name=\"hpo-HP.580004408\"> </a></td><td>Abnormality of the sense of smell</td></tr><tr><td style=\"white-space:nowrap\">HP:0009912<a name=\"hpo-HP.580009912\"> </a></td><td>Abnormality of the tragus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000537<a name=\"hpo-HP.580000537\"> </a></td><td>Epicanthus inversus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000565<a name=\"hpo-HP.580000565\"> </a></td><td>Esotropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000752<a name=\"hpo-HP.580000752\"> </a></td><td>Hyperactivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003186<a name=\"hpo-HP.580003186\"> </a></td><td>Inverted nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0012503<a name=\"hpo-HP.580012503\"> </a></td><td>Abnormality of the pituitary gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0100710<a name=\"hpo-HP.580100710\"> </a></td><td>Impulsivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000357<a name=\"hpo-HP.580000357\"> </a></td><td>Abnormal location of ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0000820<a name=\"hpo-HP.580000820\"> </a></td><td>Abnormality of the thyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000828<a name=\"hpo-HP.580000828\"> </a></td><td>Abnormality of the parathyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000834<a name=\"hpo-HP.580000834\"> </a></td><td>Abnormality of the adrenal glands</td></tr><tr><td style=\"white-space:nowrap\">HP:0012093<a name=\"hpo-HP.580012093\"> </a></td><td>Abnormality of endocrine pancreas physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000269<a name=\"hpo-HP.580000269\"> </a></td><td>Prominent occiput</td></tr><tr><td style=\"white-space:nowrap\">HP:0000535<a name=\"hpo-HP.580000535\"> </a></td><td>Sparse and thin eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000639<a name=\"hpo-HP.580000639\"> </a></td><td>Nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000718<a name=\"hpo-HP.580000718\"> </a></td><td>Aggressive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000957<a name=\"hpo-HP.580000957\"> </a></td><td>Cafe-au-lait spot</td></tr><tr><td style=\"white-space:nowrap\">HP:0000256<a name=\"hpo-HP.580000256\"> </a></td><td>Macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000750<a name=\"hpo-HP.580000750\"> </a></td><td>Delayed speech and language development</td></tr><tr><td style=\"white-space:nowrap\">HP:0000963<a name=\"hpo-HP.580000963\"> </a></td><td>Thin skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001260<a name=\"hpo-HP.580001260\"> </a></td><td>Dysarthria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002194<a name=\"hpo-HP.580002194\"> </a></td><td>Delayed gross motor development</td></tr><tr><td style=\"white-space:nowrap\">HP:0003196<a name=\"hpo-HP.580003196\"> </a></td><td>Short nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0001155<a name=\"hpo-HP.580001155\"> </a></td><td>Abnormality of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0100022<a name=\"hpo-HP.580100022\"> </a></td><td>Abnormality of movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010862<a name=\"hpo-HP.580010862\"> </a></td><td>Delayed fine motor development</td></tr><tr><td style=\"white-space:nowrap\">HP:0000343<a name=\"hpo-HP.580000343\"> </a></td><td>Long philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000717<a name=\"hpo-HP.580000717\"> </a></td><td>Autism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001883<a name=\"hpo-HP.580001883\"> </a></td><td>Talipes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002553<a name=\"hpo-HP.580002553\"> </a></td><td>Highly arched eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0007488<a name=\"hpo-HP.580007488\"> </a></td><td>Diffuse skin atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000822<a name=\"hpo-HP.580000822\"> </a></td><td>Hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001278<a name=\"hpo-HP.580001278\"> </a></td><td>Orthostatic hypotension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001944<a name=\"hpo-HP.580001944\"> </a></td><td>Dehydration</td></tr><tr><td style=\"white-space:nowrap\">HP:0001945<a name=\"hpo-HP.580001945\"> </a></td><td>Fever</td></tr><tr><td style=\"white-space:nowrap\">HP:0002019<a name=\"hpo-HP.580002019\"> </a></td><td>Constipation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002020<a name=\"hpo-HP.580002020\"> </a></td><td>Gastroesophageal reflux</td></tr><tr><td style=\"white-space:nowrap\">HP:0002027<a name=\"hpo-HP.580002027\"> </a></td><td>Abdominal pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0002718<a name=\"hpo-HP.580002718\"> </a></td><td>Recurrent bacterial infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0002841<a name=\"hpo-HP.580002841\"> </a></td><td>Recurrent fungal infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0004395<a name=\"hpo-HP.580004395\"> </a></td><td>Malnutrition</td></tr><tr><td style=\"white-space:nowrap\">HP:0009830<a name=\"hpo-HP.580009830\"> </a></td><td>Peripheral neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000126<a name=\"hpo-HP.580000126\"> </a></td><td>Hydronephrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000519<a name=\"hpo-HP.580000519\"> </a></td><td>Developmental cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000648<a name=\"hpo-HP.580000648\"> </a></td><td>Optic atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001053<a name=\"hpo-HP.580001053\"> </a></td><td>Hypopigmented skin patches</td></tr><tr><td style=\"white-space:nowrap\">HP:0001087<a name=\"hpo-HP.580001087\"> </a></td><td>Developmental glaucoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0002119<a name=\"hpo-HP.580002119\"> </a></td><td>Ventriculomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002280<a name=\"hpo-HP.580002280\"> </a></td><td>Enlarged cisterna magna</td></tr><tr><td style=\"white-space:nowrap\">HP:0003298<a name=\"hpo-HP.580003298\"> </a></td><td>Spina bifida occulta</td></tr><tr><td style=\"white-space:nowrap\">HP:0004467<a name=\"hpo-HP.580004467\"> </a></td><td>Preauricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0008511<a name=\"hpo-HP.580008511\"> </a></td><td>Central posterior corneal opacity</td></tr><tr><td style=\"white-space:nowrap\">HP:0010780<a name=\"hpo-HP.580010780\"> </a></td><td>Hyperacusis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030048<a name=\"hpo-HP.580030048\"> </a></td><td>Colpocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0100335<a name=\"hpo-HP.580100335\"> </a></td><td>Non-midline cleft lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000525<a name=\"hpo-HP.580000525\"> </a></td><td>Abnormality iris morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002719<a name=\"hpo-HP.580002719\"> </a></td><td>Recurrent infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0000153<a name=\"hpo-HP.580000153\"> </a></td><td>Abnormality of the mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001903<a name=\"hpo-HP.580001903\"> </a></td><td>Anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002094<a name=\"hpo-HP.580002094\"> </a></td><td>Dyspnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002206<a name=\"hpo-HP.580002206\"> </a></td><td>Pulmonary fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002789<a name=\"hpo-HP.580002789\"> </a></td><td>Tachypnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002793<a name=\"hpo-HP.580002793\"> </a></td><td>Abnormal pattern of respiration</td></tr><tr><td style=\"white-space:nowrap\">HP:0003565<a name=\"hpo-HP.580003565\"> </a></td><td>Elevated erythrocyte sedimentation rate</td></tr><tr><td style=\"white-space:nowrap\">HP:0006517<a name=\"hpo-HP.580006517\"> </a></td><td>Intraalveolar phospholipid accumulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0006530<a name=\"hpo-HP.580006530\"> </a></td><td>Interstitial pulmonary abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0100759<a name=\"hpo-HP.580100759\"> </a></td><td>Clubbing of fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0002103<a name=\"hpo-HP.580002103\"> </a></td><td>Abnormal pleura morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001596<a name=\"hpo-HP.580001596\"> </a></td><td>Alopecia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001882<a name=\"hpo-HP.580001882\"> </a></td><td>Leukopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002013<a name=\"hpo-HP.580002013\"> </a></td><td>Vomiting</td></tr><tr><td style=\"white-space:nowrap\">HP:0002028<a name=\"hpo-HP.580002028\"> </a></td><td>Chronic diarrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002573<a name=\"hpo-HP.580002573\"> </a></td><td>Hematochezia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002960<a name=\"hpo-HP.580002960\"> </a></td><td>Autoimmunity</td></tr><tr><td style=\"white-space:nowrap\">HP:0005387<a name=\"hpo-HP.580005387\"> </a></td><td>Combined immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0011109<a name=\"hpo-HP.580011109\"> </a></td><td>Chronic sinusitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004429<a name=\"hpo-HP.580004429\"> </a></td><td>Recurrent viral infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0000280<a name=\"hpo-HP.580000280\"> </a></td><td>Coarse facial features</td></tr><tr><td style=\"white-space:nowrap\">HP:0000294<a name=\"hpo-HP.580000294\"> </a></td><td>Low anterior hairline</td></tr><tr><td style=\"white-space:nowrap\">HP:0000577<a name=\"hpo-HP.580000577\"> </a></td><td>Exotropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001873<a name=\"hpo-HP.580001873\"> </a></td><td>Thrombocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002011<a name=\"hpo-HP.580002011\"> </a></td><td>Morphological central nervous system abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0006610<a name=\"hpo-HP.580006610\"> </a></td><td>Wide intermamillary distance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011231<a name=\"hpo-HP.580011231\"> </a></td><td>Prominent eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0012718<a name=\"hpo-HP.580012718\"> </a></td><td>Morphological abnormality of the gastrointestinal tract</td></tr><tr><td style=\"white-space:nowrap\">HP:0002024<a name=\"hpo-HP.580002024\"> </a></td><td>Malabsorption</td></tr><tr><td style=\"white-space:nowrap\">HP:0001394<a name=\"hpo-HP.580001394\"> </a></td><td>Cirrhosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001414<a name=\"hpo-HP.580001414\"> </a></td><td>Microvesicular hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001403<a name=\"hpo-HP.580001403\"> </a></td><td>Macrovesicular hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001410<a name=\"hpo-HP.580001410\"> </a></td><td>Decreased liver function</td></tr><tr><td style=\"white-space:nowrap\">HP:0001409<a name=\"hpo-HP.580001409\"> </a></td><td>Portal hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001744<a name=\"hpo-HP.580001744\"> </a></td><td>Splenomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0003394<a name=\"hpo-HP.580003394\"> </a></td><td>Muscle spasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003750<a name=\"hpo-HP.580003750\"> </a></td><td>Increased muscle fatiguability</td></tr><tr><td style=\"white-space:nowrap\">HP:0002123<a name=\"hpo-HP.580002123\"> </a></td><td>Generalized myoclonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0002219<a name=\"hpo-HP.580002219\"> </a></td><td>Facial hypertrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000831<a name=\"hpo-HP.580000831\"> </a></td><td>Insulin-resistant diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001891<a name=\"hpo-HP.580001891\"> </a></td><td>Iron deficiency anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001264<a name=\"hpo-HP.580001264\"> </a></td><td>Spastic diplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002313<a name=\"hpo-HP.580002313\"> </a></td><td>Spastic paraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001347<a name=\"hpo-HP.580001347\"> </a></td><td>Hyperreflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002460<a name=\"hpo-HP.580002460\"> </a></td><td>Distal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000763<a name=\"hpo-HP.580000763\"> </a></td><td>Sensory neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001268<a name=\"hpo-HP.580001268\"> </a></td><td>Mental deterioration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002169<a name=\"hpo-HP.580002169\"> </a></td><td>Clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001332<a name=\"hpo-HP.580001332\"> </a></td><td>Dystonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100716<a name=\"hpo-HP.580100716\"> </a></td><td>Self-injurious behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000602<a name=\"hpo-HP.580000602\"> </a></td><td>Ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001251<a name=\"hpo-HP.580001251\"> </a></td><td>Ataxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000776<a name=\"hpo-HP.580000776\"> </a></td><td>Congenital diaphragmatic hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000410<a name=\"hpo-HP.580000410\"> </a></td><td>Mixed hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000510<a name=\"hpo-HP.580000510\"> </a></td><td>Rod-cone dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0004437<a name=\"hpo-HP.580004437\"> </a></td><td>Cranial hyperostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011001<a name=\"hpo-HP.580011001\"> </a></td><td>Increased bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0000956<a name=\"hpo-HP.580000956\"> </a></td><td>Acanthosis nigricans</td></tr><tr><td style=\"white-space:nowrap\">HP:0000958<a name=\"hpo-HP.580000958\"> </a></td><td>Dry skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000580<a name=\"hpo-HP.580000580\"> </a></td><td>Pigmentary retinopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000649<a name=\"hpo-HP.580000649\"> </a></td><td>Abnormality of visual evoked potentials</td></tr><tr><td style=\"white-space:nowrap\">HP:0000657<a name=\"hpo-HP.580000657\"> </a></td><td>Oculomotor apraxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000479<a name=\"hpo-HP.580000479\"> </a></td><td>Abnormal retinal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001317<a name=\"hpo-HP.580001317\"> </a></td><td>Abnormal cerebellum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001533<a name=\"hpo-HP.580001533\"> </a></td><td>Slender build</td></tr><tr><td style=\"white-space:nowrap\">HP:0001629<a name=\"hpo-HP.580001629\"> </a></td><td>Ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0000703<a name=\"hpo-HP.580000703\"> </a></td><td>Dentinogenesis imperfecta</td></tr><tr><td style=\"white-space:nowrap\">HP:0000914<a name=\"hpo-HP.580000914\"> </a></td><td>Shield chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0001500<a name=\"hpo-HP.580001500\"> </a></td><td>Broad finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0003086<a name=\"hpo-HP.580003086\"> </a></td><td>Acromesomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003416<a name=\"hpo-HP.580003416\"> </a></td><td>Spinal canal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002815<a name=\"hpo-HP.580002815\"> </a></td><td>Abnormality of the knee</td></tr><tr><td style=\"white-space:nowrap\">HP:0002992<a name=\"hpo-HP.580002992\"> </a></td><td>Abnormality of tibia morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001639<a name=\"hpo-HP.580001639\"> </a></td><td>Hypertrophic cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003236<a name=\"hpo-HP.580003236\"> </a></td><td>Elevated serum creatine kinase</td></tr><tr><td style=\"white-space:nowrap\">HP:0001369<a name=\"hpo-HP.580001369\"> </a></td><td>Arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003560<a name=\"hpo-HP.580003560\"> </a></td><td>Muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003974<a name=\"hpo-HP.580003974\"> </a></td><td>Absent radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0002818<a name=\"hpo-HP.580002818\"> </a></td><td>Abnormality of the radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0001561<a name=\"hpo-HP.580001561\"> </a></td><td>Polyhydramnios</td></tr><tr><td style=\"white-space:nowrap\">HP:0002299<a name=\"hpo-HP.580002299\"> </a></td><td>Brittle hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002208<a name=\"hpo-HP.580002208\"> </a></td><td>Coarse hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002213<a name=\"hpo-HP.580002213\"> </a></td><td>Fine hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000522<a name=\"hpo-HP.580000522\"> </a></td><td>Alacrima</td></tr><tr><td style=\"white-space:nowrap\">HP:0100704<a name=\"hpo-HP.580100704\"> </a></td><td>Cerebral visual impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0012713<a name=\"hpo-HP.580012713\"> </a></td><td>Moderate hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002307<a name=\"hpo-HP.580002307\"> </a></td><td>Drooling</td></tr><tr><td style=\"white-space:nowrap\">HP:0002714<a name=\"hpo-HP.580002714\"> </a></td><td>Downturned corners of mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000191<a name=\"hpo-HP.580000191\"> </a></td><td>Accessory oral frenulum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000158<a name=\"hpo-HP.580000158\"> </a></td><td>Macroglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012020<a name=\"hpo-HP.580012020\"> </a></td><td>Right aortic arch</td></tr><tr><td style=\"white-space:nowrap\">HP:0002104<a name=\"hpo-HP.580002104\"> </a></td><td>Apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0000598<a name=\"hpo-HP.580000598\"> </a></td><td>Abnormality of the ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0007874<a name=\"hpo-HP.580007874\"> </a></td><td>Almond-shaped palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0010804<a name=\"hpo-HP.580010804\"> </a></td><td>Tented upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000885<a name=\"hpo-HP.580000885\"> </a></td><td>Broad ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000768<a name=\"hpo-HP.580000768\"> </a></td><td>Pectus carinatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001680<a name=\"hpo-HP.580001680\"> </a></td><td>Coarctation of aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0000687<a name=\"hpo-HP.580000687\"> </a></td><td>Widely spaced teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000047<a name=\"hpo-HP.580000047\"> </a></td><td>Hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0001943<a name=\"hpo-HP.580001943\"> </a></td><td>Hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012369<a name=\"hpo-HP.580012369\"> </a></td><td>Abnormality of malar bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0009900<a name=\"hpo-HP.580009900\"> </a></td><td>Unilateral deafness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000023<a name=\"hpo-HP.580000023\"> </a></td><td>Inguinal hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000074<a name=\"hpo-HP.580000074\"> </a></td><td>Ureteropelvic junction obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001800<a name=\"hpo-HP.580001800\"> </a></td><td>Hypoplastic toenails</td></tr><tr><td style=\"white-space:nowrap\">HP:0001804<a name=\"hpo-HP.580001804\"> </a></td><td>Hypoplastic fingernail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002949<a name=\"hpo-HP.580002949\"> </a></td><td>Fused cervical vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0008050<a name=\"hpo-HP.580008050\"> </a></td><td>Abnormality of the palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0008577<a name=\"hpo-HP.580008577\"> </a></td><td>Underfolded helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0008589<a name=\"hpo-HP.580008589\"> </a></td><td>Hypoplastic helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0010863<a name=\"hpo-HP.580010863\"> </a></td><td>Receptive language delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0002282<a name=\"hpo-HP.580002282\"> </a></td><td>Gray matter heterotopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002085<a name=\"hpo-HP.580002085\"> </a></td><td>Occipital encephalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0001057<a name=\"hpo-HP.580001057\"> </a></td><td>Aplasia cutis congenita</td></tr><tr><td style=\"white-space:nowrap\">HP:0000211<a name=\"hpo-HP.580000211\"> </a></td><td>Trismus</td></tr><tr><td style=\"white-space:nowrap\">HP:0008422<a name=\"hpo-HP.580008422\"> </a></td><td>Vertebral wedging</td></tr><tr><td style=\"white-space:nowrap\">HP:0003170<a name=\"hpo-HP.580003170\"> </a></td><td>Abnormality of the acetabulum</td></tr><tr><td style=\"white-space:nowrap\">HP:0003272<a name=\"hpo-HP.580003272\"> </a></td><td>Abnormality of the hip bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0003028<a name=\"hpo-HP.580003028\"> </a></td><td>Abnormality of the ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0003301<a name=\"hpo-HP.580003301\"> </a></td><td>Irregular vertebral endplates</td></tr><tr><td style=\"white-space:nowrap\">HP:0010508<a name=\"hpo-HP.580010508\"> </a></td><td>Metatarsus valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0009811<a name=\"hpo-HP.580009811\"> </a></td><td>Abnormality of the elbow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000736<a name=\"hpo-HP.580000736\"> </a></td><td>Short attention span</td></tr><tr><td style=\"white-space:nowrap\">HP:0002912<a name=\"hpo-HP.580002912\"> </a></td><td>Methylmalonic acidemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001941<a name=\"hpo-HP.580001941\"> </a></td><td>Acidosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001992<a name=\"hpo-HP.580001992\"> </a></td><td>Organic aciduria</td></tr><tr><td style=\"white-space:nowrap\">HP:0009027<a name=\"hpo-HP.580009027\"> </a></td><td>Foot dorsiflexor weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002063<a name=\"hpo-HP.580002063\"> </a></td><td>Rigidity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000384<a name=\"hpo-HP.580000384\"> </a></td><td>Preauricular skin tag</td></tr><tr><td style=\"white-space:nowrap\">HP:0200046<a name=\"hpo-HP.580200046\"> </a></td><td>Cat cry</td></tr><tr><td style=\"white-space:nowrap\">HP:0001357<a name=\"hpo-HP.580001357\"> </a></td><td>Plagiocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000670<a name=\"hpo-HP.580000670\"> </a></td><td>Carious teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0011090<a name=\"hpo-HP.580011090\"> </a></td><td>Fused teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0012810<a name=\"hpo-HP.580012810\"> </a></td><td>Wide nasal base</td></tr><tr><td style=\"white-space:nowrap\">HP:0010296<a name=\"hpo-HP.580010296\"> </a></td><td>Ankyloglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001636<a name=\"hpo-HP.580001636\"> </a></td><td>Tetralogy of Fallot</td></tr><tr><td style=\"white-space:nowrap\">HP:0001305<a name=\"hpo-HP.580001305\"> </a></td><td>Dandy-Walker malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000238<a name=\"hpo-HP.580000238\"> </a></td><td>Hydrocephalus</td></tr><tr><td style=\"white-space:nowrap\">HP:0005469<a name=\"hpo-HP.580005469\"> </a></td><td>Flat occiput</td></tr><tr><td style=\"white-space:nowrap\">HP:0000270<a name=\"hpo-HP.580000270\"> </a></td><td>Delayed cranial suture closure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000239<a name=\"hpo-HP.580000239\"> </a></td><td>Large fontanelles</td></tr><tr><td style=\"white-space:nowrap\">HP:0010537<a name=\"hpo-HP.580010537\"> </a></td><td>Wide cranial sutures</td></tr><tr><td style=\"white-space:nowrap\">HP:0002217<a name=\"hpo-HP.580002217\"> </a></td><td>Slow-growing hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000587<a name=\"hpo-HP.580000587\"> </a></td><td>Abnormality of the optic nerve</td></tr><tr><td style=\"white-space:nowrap\">HP:0005989<a name=\"hpo-HP.580005989\"> </a></td><td>Redundant neck skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010775<a name=\"hpo-HP.580010775\"> </a></td><td>Vascular ring</td></tr><tr><td style=\"white-space:nowrap\">HP:0002779<a name=\"hpo-HP.580002779\"> </a></td><td>Tracheomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002827<a name=\"hpo-HP.580002827\"> </a></td><td>Hip dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001302<a name=\"hpo-HP.580001302\"> </a></td><td>Pachygyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0007362<a name=\"hpo-HP.580007362\"> </a></td><td>Aplasia/Hypoplasia of the brainstem</td></tr><tr><td style=\"white-space:nowrap\">HP:0001558<a name=\"hpo-HP.580001558\"> </a></td><td>Decreased fetal movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010878<a name=\"hpo-HP.580010878\"> </a></td><td>Fetal cystic hygroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0011398<a name=\"hpo-HP.580011398\"> </a></td><td>Central hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002071<a name=\"hpo-HP.580002071\"> </a></td><td>Abnormality of extrapyramidal motor function</td></tr><tr><td style=\"white-space:nowrap\">HP:0000826<a name=\"hpo-HP.580000826\"> </a></td><td>Precocious puberty</td></tr><tr><td style=\"white-space:nowrap\">HP:0000014<a name=\"hpo-HP.580000014\"> </a></td><td>Abnormality of the bladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0005037<a name=\"hpo-HP.580005037\"> </a></td><td>Proximal radio-ulnar synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100543<a name=\"hpo-HP.580100543\"> </a></td><td>Cognitive impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000481<a name=\"hpo-HP.580000481\"> </a></td><td>Abnormal cornea morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000076<a name=\"hpo-HP.580000076\"> </a></td><td>Vesicoureteral reflux</td></tr><tr><td style=\"white-space:nowrap\">HP:0000297<a name=\"hpo-HP.580000297\"> </a></td><td>Facial hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000391<a name=\"hpo-HP.580000391\"> </a></td><td>Thickened helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0001162<a name=\"hpo-HP.580001162\"> </a></td><td>Postaxial hand polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001385<a name=\"hpo-HP.580001385\"> </a></td><td>Hip dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002342<a name=\"hpo-HP.580002342\"> </a></td><td>Intellectual disability, moderate</td></tr><tr><td style=\"white-space:nowrap\">HP:0003191<a name=\"hpo-HP.580003191\"> </a></td><td>Cleft ala nasi</td></tr><tr><td style=\"white-space:nowrap\">HP:0009765<a name=\"hpo-HP.580009765\"> </a></td><td>Low hanging columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0010297<a name=\"hpo-HP.580010297\"> </a></td><td>Bifid tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0011330<a name=\"hpo-HP.580011330\"> </a></td><td>Metopic synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012804<a name=\"hpo-HP.580012804\"> </a></td><td>Corneal ulceration</td></tr><tr><td style=\"white-space:nowrap\">HP:0010485<a name=\"hpo-HP.580010485\"> </a></td><td>Hyperextensibility at elbow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000609<a name=\"hpo-HP.580000609\"> </a></td><td>Optic nerve hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001176<a name=\"hpo-HP.580001176\"> </a></td><td>Large hands</td></tr><tr><td style=\"white-space:nowrap\">HP:0004233<a name=\"hpo-HP.580004233\"> </a></td><td>Advanced ossification of carpal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0100842<a name=\"hpo-HP.580100842\"> </a></td><td>Septo-optic dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002034<a name=\"hpo-HP.580002034\"> </a></td><td>Abnormality of the rectum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002283<a name=\"hpo-HP.580002283\"> </a></td><td>Global brain atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003115<a name=\"hpo-HP.580003115\"> </a></td><td>Abnormal EKG</td></tr><tr><td style=\"white-space:nowrap\">HP:0002577<a name=\"hpo-HP.580002577\"> </a></td><td>Abnormal stomach morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002539<a name=\"hpo-HP.580002539\"> </a></td><td>Cortical dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006818<a name=\"hpo-HP.580006818\"> </a></td><td>4-layered lissencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000593<a name=\"hpo-HP.580000593\"> </a></td><td>Abnormal anterior chamber morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000179<a name=\"hpo-HP.580000179\"> </a></td><td>Thick lower lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002002<a name=\"hpo-HP.580002002\"> </a></td><td>Deep philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0009931<a name=\"hpo-HP.580009931\"> </a></td><td>Enlarged naris</td></tr><tr><td style=\"white-space:nowrap\">HP:0002948<a name=\"hpo-HP.580002948\"> </a></td><td>Vertebral fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002937<a name=\"hpo-HP.580002937\"> </a></td><td>Hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0002308<a name=\"hpo-HP.580002308\"> </a></td><td>Arnold-Chiari malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011320<a name=\"hpo-HP.580011320\"> </a></td><td>Unilambdoid synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002781<a name=\"hpo-HP.580002781\"> </a></td><td>Upper airway obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001363<a name=\"hpo-HP.580001363\"> </a></td><td>Craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000204<a name=\"hpo-HP.580000204\"> </a></td><td>Cleft upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001738<a name=\"hpo-HP.580001738\"> </a></td><td>Exocrine pancreatic insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002823<a name=\"hpo-HP.580002823\"> </a></td><td>Abnormality of femur morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000823<a name=\"hpo-HP.580000823\"> </a></td><td>Delayed puberty</td></tr><tr><td style=\"white-space:nowrap\">HP:0100279<a name=\"hpo-HP.580100279\"> </a></td><td>Ulcerative colitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003834<a name=\"hpo-HP.580003834\"> </a></td><td>Shoulder dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001065<a name=\"hpo-HP.580001065\"> </a></td><td>Striae distensae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000448<a name=\"hpo-HP.580000448\"> </a></td><td>Prominent nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0000554<a name=\"hpo-HP.580000554\"> </a></td><td>Uveitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001006<a name=\"hpo-HP.580001006\"> </a></td><td>obsolete Hypotrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000501<a name=\"hpo-HP.580000501\"> </a></td><td>Glaucoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000262<a name=\"hpo-HP.580000262\"> </a></td><td>Turricephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000729<a name=\"hpo-HP.580000729\"> </a></td><td>Autistic behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0010800<a name=\"hpo-HP.580010800\"> </a></td><td>Absent cupid's bow</td></tr><tr><td style=\"white-space:nowrap\">HP:0010808<a name=\"hpo-HP.580010808\"> </a></td><td>Protruding tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0009927<a name=\"hpo-HP.580009927\"> </a></td><td>Aplasia of the nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0100539<a name=\"hpo-HP.580100539\"> </a></td><td>Periorbital edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000629<a name=\"hpo-HP.580000629\"> </a></td><td>Periorbital fullness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000178<a name=\"hpo-HP.580000178\"> </a></td><td>Abnormality of lower lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000168<a name=\"hpo-HP.580000168\"> </a></td><td>Abnormality of the gingiva</td></tr><tr><td style=\"white-space:nowrap\">HP:0001022<a name=\"hpo-HP.580001022\"> </a></td><td>Albinism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000177<a name=\"hpo-HP.580000177\"> </a></td><td>Abnormality of upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001337<a name=\"hpo-HP.580001337\"> </a></td><td>Tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002135<a name=\"hpo-HP.580002135\"> </a></td><td>Basal ganglia calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0002352<a name=\"hpo-HP.580002352\"> </a></td><td>Leukoencephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002514<a name=\"hpo-HP.580002514\"> </a></td><td>Cerebral calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0010576<a name=\"hpo-HP.580010576\"> </a></td><td>Intracranial cystic lesion</td></tr><tr><td style=\"white-space:nowrap\">HP:0001622<a name=\"hpo-HP.580001622\"> </a></td><td>Premature birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002415<a name=\"hpo-HP.580002415\"> </a></td><td>Leukodystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001320<a name=\"hpo-HP.580001320\"> </a></td><td>Cerebellar vermis hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001773<a name=\"hpo-HP.580001773\"> </a></td><td>Short foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0002750<a name=\"hpo-HP.580002750\"> </a></td><td>Delayed skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004415<a name=\"hpo-HP.580004415\"> </a></td><td>Pulmonary artery stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012741<a name=\"hpo-HP.580012741\"> </a></td><td>Unilateral cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000036<a name=\"hpo-HP.580000036\"> </a></td><td>Abnormality of the penis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002408<a name=\"hpo-HP.580002408\"> </a></td><td>Cerebral arteriovenous malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0007457<a name=\"hpo-HP.580007457\"> </a></td><td>Prominent veins on trunk</td></tr><tr><td style=\"white-space:nowrap\">HP:0000378<a name=\"hpo-HP.580000378\"> </a></td><td>Cupped ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000396<a name=\"hpo-HP.580000396\"> </a></td><td>Overfolded helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000035<a name=\"hpo-HP.580000035\"> </a></td><td>Abnormal testis morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009895<a name=\"hpo-HP.580009895\"> </a></td><td>Abnormality of the crus of the helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000034<a name=\"hpo-HP.580000034\"> </a></td><td>Hydrocele testis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000722<a name=\"hpo-HP.580000722\"> </a></td><td>Obsessive-compulsive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000845<a name=\"hpo-HP.580000845\"> </a></td><td>Growth hormone excess</td></tr><tr><td style=\"white-space:nowrap\">HP:0100829<a name=\"hpo-HP.580100829\"> </a></td><td>Galactorrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001578<a name=\"hpo-HP.580001578\"> </a></td><td>Increased circulating cortisol level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000786<a name=\"hpo-HP.580000786\"> </a></td><td>Primary amenorrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001701<a name=\"hpo-HP.580001701\"> </a></td><td>Pericarditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002076<a name=\"hpo-HP.580002076\"> </a></td><td>Migraine</td></tr><tr><td style=\"white-space:nowrap\">HP:0004755<a name=\"hpo-HP.580004755\"> </a></td><td>Supraventricular tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010522<a name=\"hpo-HP.580010522\"> </a></td><td>Dyslexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004313<a name=\"hpo-HP.580004313\"> </a></td><td>Decreased circulating antibody level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000011<a name=\"hpo-HP.580000011\"> </a></td><td>Neurogenic bladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000641<a name=\"hpo-HP.580000641\"> </a></td><td>Dysmetric saccades</td></tr><tr><td style=\"white-space:nowrap\">HP:0007772<a name=\"hpo-HP.580007772\"> </a></td><td>Impaired smooth pursuit</td></tr><tr><td style=\"white-space:nowrap\">HP:0001583<a name=\"hpo-HP.580001583\"> </a></td><td>Rotary nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010544<a name=\"hpo-HP.580010544\"> </a></td><td>Vertical nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012735<a name=\"hpo-HP.580012735\"> </a></td><td>Cough</td></tr><tr><td style=\"white-space:nowrap\">HP:0002075<a name=\"hpo-HP.580002075\"> </a></td><td>Dysdiadochokinesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0007256<a name=\"hpo-HP.580007256\"> </a></td><td>Abnormal pyramidal sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0001257<a name=\"hpo-HP.580001257\"> </a></td><td>Spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002321<a name=\"hpo-HP.580002321\"> </a></td><td>Vertigo</td></tr><tr><td style=\"white-space:nowrap\">HP:0002384<a name=\"hpo-HP.580002384\"> </a></td><td>Focal impaired awareness seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011376<a name=\"hpo-HP.580011376\"> </a></td><td>Morphological abnormality of the vestibule of the inner ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0002326<a name=\"hpo-HP.580002326\"> </a></td><td>Transient ischemic attack</td></tr><tr><td style=\"white-space:nowrap\">HP:0005584<a name=\"hpo-HP.580005584\"> </a></td><td>Renal cell carcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0003124<a name=\"hpo-HP.580003124\"> </a></td><td>Hypercholesterolemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003002<a name=\"hpo-HP.580003002\"> </a></td><td>Breast carcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0004953<a name=\"hpo-HP.580004953\"> </a></td><td>obsolete Dilatation of abdominal aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0004944<a name=\"hpo-HP.580004944\"> </a></td><td>Dilatation of the cerebral artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0000100<a name=\"hpo-HP.580000100\"> </a></td><td>Nephrotic syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002783<a name=\"hpo-HP.580002783\"> </a></td><td>Recurrent lower respiratory tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0003470<a name=\"hpo-HP.580003470\"> </a></td><td>Paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006597<a name=\"hpo-HP.580006597\"> </a></td><td>Diaphragmatic paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008151<a name=\"hpo-HP.580008151\"> </a></td><td>Prolonged prothrombin time</td></tr><tr><td style=\"white-space:nowrap\">HP:0010628<a name=\"hpo-HP.580010628\"> </a></td><td>Facial palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011892<a name=\"hpo-HP.580011892\"> </a></td><td>Low levels of vitamin K</td></tr><tr><td style=\"white-space:nowrap\">HP:0001075<a name=\"hpo-HP.580001075\"> </a></td><td>Atrophic scars</td></tr><tr><td style=\"white-space:nowrap\">HP:0001816<a name=\"hpo-HP.580001816\"> </a></td><td>Thin nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002216<a name=\"hpo-HP.580002216\"> </a></td><td>Premature graying of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0003401<a name=\"hpo-HP.580003401\"> </a></td><td>Paresthesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100134<a name=\"hpo-HP.580100134\"> </a></td><td>Abnormality of the axillary hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0100797<a name=\"hpo-HP.580100797\"> </a></td><td>Toenail dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010461<a name=\"hpo-HP.580010461\"> </a></td><td>Abnormality of the male genitalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000044<a name=\"hpo-HP.580000044\"> </a></td><td>Hypogonadotropic hypogonadism</td></tr><tr><td style=\"white-space:nowrap\">HP:0100568<a name=\"hpo-HP.580100568\"> </a></td><td>Neoplasm of the endocrine system</td></tr><tr><td style=\"white-space:nowrap\">HP:0001646<a name=\"hpo-HP.580001646\"> </a></td><td>Abnormal aortic valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000813<a name=\"hpo-HP.580000813\"> </a></td><td>Bicornuate uterus</td></tr><tr><td style=\"white-space:nowrap\">HP:0004380<a name=\"hpo-HP.580004380\"> </a></td><td>Aortic valve calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0001650<a name=\"hpo-HP.580001650\"> </a></td><td>Aortic valve stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000073<a name=\"hpo-HP.580000073\"> </a></td><td>Ureteral duplication</td></tr><tr><td style=\"white-space:nowrap\">HP:0100651<a name=\"hpo-HP.580100651\"> </a></td><td>Type I diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000819<a name=\"hpo-HP.580000819\"> </a></td><td>Diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000573<a name=\"hpo-HP.580000573\"> </a></td><td>Retinal hemorrhage</td></tr><tr><td style=\"white-space:nowrap\">HP:0005264<a name=\"hpo-HP.580005264\"> </a></td><td>Abnormality of the gallbladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000475<a name=\"hpo-HP.580000475\"> </a></td><td>Broad neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000089<a name=\"hpo-HP.580000089\"> </a></td><td>Renal hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000921<a name=\"hpo-HP.580000921\"> </a></td><td>Missing ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0001789<a name=\"hpo-HP.580001789\"> </a></td><td>Hydrops fetalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002089<a name=\"hpo-HP.580002089\"> </a></td><td>Pulmonary hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003422<a name=\"hpo-HP.580003422\"> </a></td><td>Vertebral segmentation defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002323<a name=\"hpo-HP.580002323\"> </a></td><td>Anencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000341<a name=\"hpo-HP.580000341\"> </a></td><td>Narrow forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0002869<a name=\"hpo-HP.580002869\"> </a></td><td>Flared iliac wings</td></tr><tr><td style=\"white-space:nowrap\">HP:0003100<a name=\"hpo-HP.580003100\"> </a></td><td>Slender long bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0003275<a name=\"hpo-HP.580003275\"> </a></td><td>Narrow pelvis bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0009891<a name=\"hpo-HP.580009891\"> </a></td><td>Underdeveloped supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0011039<a name=\"hpo-HP.580011039\"> </a></td><td>Abnormality of the helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0008572<a name=\"hpo-HP.580008572\"> </a></td><td>External ear malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0009738<a name=\"hpo-HP.580009738\"> </a></td><td>Abnormality of the antihelix</td></tr><tr><td style=\"white-space:nowrap\">HP:0011328<a name=\"hpo-HP.580011328\"> </a></td><td>Abnormality of fontanelles</td></tr><tr><td style=\"white-space:nowrap\">HP:0012155<a name=\"hpo-HP.580012155\"> </a></td><td>Decreased corneal sensation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004602<a name=\"hpo-HP.580004602\"> </a></td><td>Cervical C2/C3 vertebral fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002997<a name=\"hpo-HP.580002997\"> </a></td><td>Abnormality of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0009777<a name=\"hpo-HP.580009777\"> </a></td><td>Absent thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002893<a name=\"hpo-HP.580002893\"> </a></td><td>Pituitary adenoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0040278<a name=\"hpo-HP.580040278\"> </a></td><td>Prolactinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001555<a name=\"hpo-HP.580001555\"> </a></td><td>Asymmetry of the thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0000902<a name=\"hpo-HP.580000902\"> </a></td><td>Rib fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002164<a name=\"hpo-HP.580002164\"> </a></td><td>Nail dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011314<a name=\"hpo-HP.580011314\"> </a></td><td>Abnormality of long bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002867<a name=\"hpo-HP.580002867\"> </a></td><td>Abnormality of the ilium</td></tr><tr><td style=\"white-space:nowrap\">HP:0000774<a name=\"hpo-HP.580000774\"> </a></td><td>Narrow chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0006482<a name=\"hpo-HP.580006482\"> </a></td><td>Abnormality of dental morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0004383<a name=\"hpo-HP.580004383\"> </a></td><td>Hypoplastic left heart</td></tr><tr><td style=\"white-space:nowrap\">HP:0002015<a name=\"hpo-HP.580002015\"> </a></td><td>Dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0500093<a name=\"hpo-HP.580500093\"> </a></td><td>Food allergy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001519<a name=\"hpo-HP.580001519\"> </a></td><td>Disproportionate tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0003179<a name=\"hpo-HP.580003179\"> </a></td><td>Protrusio acetabuli</td></tr><tr><td style=\"white-space:nowrap\">HP:0007385<a name=\"hpo-HP.580007385\"> </a></td><td>Aplasia cutis congenita of scalp</td></tr><tr><td style=\"white-space:nowrap\">HP:0000716<a name=\"hpo-HP.580000716\"> </a></td><td>Depressivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0012583<a name=\"hpo-HP.580012583\"> </a></td><td>Unilateral renal hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000618<a name=\"hpo-HP.580000618\"> </a></td><td>Blindness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001004<a name=\"hpo-HP.580001004\"> </a></td><td>Lymphedema</td></tr><tr><td style=\"white-space:nowrap\">HP:0002652<a name=\"hpo-HP.580002652\"> </a></td><td>Skeletal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012520<a name=\"hpo-HP.580012520\"> </a></td><td>Perivascular spaces</td></tr><tr><td style=\"white-space:nowrap\">HP:0005293<a name=\"hpo-HP.580005293\"> </a></td><td>Venous insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0012432<a name=\"hpo-HP.580012432\"> </a></td><td>Chronic fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002578<a name=\"hpo-HP.580002578\"> </a></td><td>Gastroparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001658<a name=\"hpo-HP.580001658\"> </a></td><td>Myocardial infarction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001802<a name=\"hpo-HP.580001802\"> </a></td><td>Absent toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0001821<a name=\"hpo-HP.580001821\"> </a></td><td>Broad nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0000807<a name=\"hpo-HP.580000807\"> </a></td><td>Glandular hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0100582<a name=\"hpo-HP.580100582\"> </a></td><td>Nasal polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002653<a name=\"hpo-HP.580002653\"> </a></td><td>Bone pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0001073<a name=\"hpo-HP.580001073\"> </a></td><td>Cigarette-paper scars</td></tr><tr><td style=\"white-space:nowrap\">HP:0031913<a name=\"hpo-HP.580031913\"> </a></td><td>Rhombencephalosynapsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002617<a name=\"hpo-HP.580002617\"> </a></td><td>Dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005107<a name=\"hpo-HP.580005107\"> </a></td><td>Abnormal sacrum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002025<a name=\"hpo-HP.580002025\"> </a></td><td>Anal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0009099<a name=\"hpo-HP.580009099\"> </a></td><td>Median cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0003212<a name=\"hpo-HP.580003212\"> </a></td><td>Increased circulating IgE level</td></tr><tr><td style=\"white-space:nowrap\">HP:0001319<a name=\"hpo-HP.580001319\"> </a></td><td>Neonatal hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002659<a name=\"hpo-HP.580002659\"> </a></td><td>Increased susceptibility to fractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0025246<a name=\"hpo-HP.580025246\"> </a></td><td>Trichilemmal cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0002107<a name=\"hpo-HP.580002107\"> </a></td><td>Pneumothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0000107<a name=\"hpo-HP.580000107\"> </a></td><td>Renal cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0001025<a name=\"hpo-HP.580001025\"> </a></td><td>Urticaria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002204<a name=\"hpo-HP.580002204\"> </a></td><td>Pulmonary embolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001058<a name=\"hpo-HP.580001058\"> </a></td><td>Poor wound healing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003010<a name=\"hpo-HP.580003010\"> </a></td><td>Prolonged bleeding time</td></tr><tr><td style=\"white-space:nowrap\">HP:0100502<a name=\"hpo-HP.580100502\"> </a></td><td>Vitamin B12 deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0100510<a name=\"hpo-HP.580100510\"> </a></td><td>Low levels of vitamin C</td></tr><tr><td style=\"white-space:nowrap\">HP:0030976<a name=\"hpo-HP.580030976\"> </a></td><td>Abnormal factor VIII activity</td></tr><tr><td style=\"white-space:nowrap\">HP:0100789<a name=\"hpo-HP.580100789\"> </a></td><td>Torus palatinus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000108<a name=\"hpo-HP.580000108\"> </a></td><td>Renal corticomedullary cysts</td></tr><tr><td style=\"white-space:nowrap\">HP:0000072<a name=\"hpo-HP.580000072\"> </a></td><td>Hydroureter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000019<a name=\"hpo-HP.580000019\"> </a></td><td>Urinary hesitancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100771<a name=\"hpo-HP.580100771\"> </a></td><td>Hypoperistalsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000021<a name=\"hpo-HP.580000021\"> </a></td><td>Megacystis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004388<a name=\"hpo-HP.580004388\"> </a></td><td>Microcolon</td></tr><tr><td style=\"white-space:nowrap\">HP:0005247<a name=\"hpo-HP.580005247\"> </a></td><td>Hypoplasia of the abdominal wall musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0004794<a name=\"hpo-HP.580004794\"> </a></td><td>Malrotation of small bowel</td></tr><tr><td style=\"white-space:nowrap\">HP:0000045<a name=\"hpo-HP.580000045\"> </a></td><td>Abnormality of the scrotum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002236<a name=\"hpo-HP.580002236\"> </a></td><td>Frontal upsweep of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000212<a name=\"hpo-HP.580000212\"> </a></td><td>Gingival overgrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001808<a name=\"hpo-HP.580001808\"> </a></td><td>Fragile nails</td></tr><tr><td style=\"white-space:nowrap\">HP:0000225<a name=\"hpo-HP.580000225\"> </a></td><td>Gingival bleeding</td></tr><tr><td style=\"white-space:nowrap\">HP:0006009<a name=\"hpo-HP.580006009\"> </a></td><td>Broad phalanx</td></tr><tr><td style=\"white-space:nowrap\">HP:0001837<a name=\"hpo-HP.580001837\"> </a></td><td>Broad toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001946<a name=\"hpo-HP.580001946\"> </a></td><td>Ketosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002490<a name=\"hpo-HP.580002490\"> </a></td><td>Increased CSF lactate</td></tr><tr><td style=\"white-space:nowrap\">HP:0002922<a name=\"hpo-HP.580002922\"> </a></td><td>Increased CSF protein</td></tr><tr><td style=\"white-space:nowrap\">HP:0003128<a name=\"hpo-HP.580003128\"> </a></td><td>Lactic acidosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003111<a name=\"hpo-HP.580003111\"> </a></td><td>Abnormal blood ion concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0032234<a name=\"hpo-HP.580032234\"> </a></td><td>Increased circulating creatine kinase MM isoform</td></tr><tr><td style=\"white-space:nowrap\">HP:0003348<a name=\"hpo-HP.580003348\"> </a></td><td>Hyperalaninemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008347<a name=\"hpo-HP.580008347\"> </a></td><td>Decreased activity of mitochondrial complex IV</td></tr><tr><td style=\"white-space:nowrap\">HP:0000326<a name=\"hpo-HP.580000326\"> </a></td><td>Abnormality of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0010758<a name=\"hpo-HP.580010758\"> </a></td><td>Abnormality of the premaxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0005681<a name=\"hpo-HP.580005681\"> </a></td><td>Juvenile rheumatoid arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000514<a name=\"hpo-HP.580000514\"> </a></td><td>Slow saccadic eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0002788<a name=\"hpo-HP.580002788\"> </a></td><td>Recurrent upper respiratory tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0003396<a name=\"hpo-HP.580003396\"> </a></td><td>Syringomyelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003011<a name=\"hpo-HP.580003011\"> </a></td><td>Abnormality of the musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0002098<a name=\"hpo-HP.580002098\"> </a></td><td>Respiratory distress</td></tr><tr><td style=\"white-space:nowrap\">HP:0002018<a name=\"hpo-HP.580002018\"> </a></td><td>Nausea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002014<a name=\"hpo-HP.580002014\"> </a></td><td>Diarrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0025168<a name=\"hpo-HP.580025168\"> </a></td><td>Left ventricular diastolic dysfunction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001679<a name=\"hpo-HP.580001679\"> </a></td><td>Abnormal aortic morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000159<a name=\"hpo-HP.580000159\"> </a></td><td>Abnormal lip morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011338<a name=\"hpo-HP.580011338\"> </a></td><td>Abnormality of mouth shape</td></tr><tr><td style=\"white-space:nowrap\">HP:0000478<a name=\"hpo-HP.580000478\"> </a></td><td>Abnormality of the eye</td></tr><tr><td style=\"white-space:nowrap\">HP:0000154<a name=\"hpo-HP.580000154\"> </a></td><td>Wide mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001513<a name=\"hpo-HP.580001513\"> </a></td><td>Obesity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002475<a name=\"hpo-HP.580002475\"> </a></td><td>Myelomeningocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0003765<a name=\"hpo-HP.580003765\"> </a></td><td>Psoriasiform dermatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010289<a name=\"hpo-HP.580010289\"> </a></td><td>Cleft of alveolar ridge of maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0003908<a name=\"hpo-HP.580003908\"> </a></td><td>Corner fracture of metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002190<a name=\"hpo-HP.580002190\"> </a></td><td>Choroid plexus cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0004370<a name=\"hpo-HP.580004370\"> </a></td><td>Abnormality of temperature regulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011611<a name=\"hpo-HP.580011611\"> </a></td><td>Interrupted aortic arch</td></tr><tr><td style=\"white-space:nowrap\">HP:0000737<a name=\"hpo-HP.580000737\"> </a></td><td>Irritability</td></tr><tr><td style=\"white-space:nowrap\">HP:0001344<a name=\"hpo-HP.580001344\"> </a></td><td>Absent speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0002376<a name=\"hpo-HP.580002376\"> </a></td><td>Developmental regression</td></tr><tr><td style=\"white-space:nowrap\">HP:0002140<a name=\"hpo-HP.580002140\"> </a></td><td>Ischemic stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0001287<a name=\"hpo-HP.580001287\"> </a></td><td>Meningitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002721<a name=\"hpo-HP.580002721\"> </a></td><td>Immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000041<a name=\"hpo-HP.580000041\"> </a></td><td>Chordee</td></tr><tr><td style=\"white-space:nowrap\">HP:0012854<a name=\"hpo-HP.580012854\"> </a></td><td>Midshaft hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0000808<a name=\"hpo-HP.580000808\"> </a></td><td>Penoscrotal hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0000048<a name=\"hpo-HP.580000048\"> </a></td><td>Bifid scrotum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001047<a name=\"hpo-HP.580001047\"> </a></td><td>Atopic dermatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001621<a name=\"hpo-HP.580001621\"> </a></td><td>Weak voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0002372<a name=\"hpo-HP.580002372\"> </a></td><td>Normal interictal EEG</td></tr><tr><td style=\"white-space:nowrap\">HP:0012803<a name=\"hpo-HP.580012803\"> </a></td><td>Anisometropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011386<a name=\"hpo-HP.580011386\"> </a></td><td>Narrow internal auditory canal</td></tr><tr><td style=\"white-space:nowrap\">HP:0012714<a name=\"hpo-HP.580012714\"> </a></td><td>Severe hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0006485<a name=\"hpo-HP.580006485\"> </a></td><td>Agenesis of incisor</td></tr><tr><td style=\"white-space:nowrap\">HP:0000787<a name=\"hpo-HP.580000787\"> </a></td><td>Nephrolithiasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011332<a name=\"hpo-HP.580011332\"> </a></td><td>Hemifacial hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001909<a name=\"hpo-HP.580001909\"> </a></td><td>Leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004808<a name=\"hpo-HP.580004808\"> </a></td><td>Acute myeloid leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006495<a name=\"hpo-HP.580006495\"> </a></td><td>Aplasia/Hypoplasia of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0001180<a name=\"hpo-HP.580001180\"> </a></td><td>Hand oligodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002991<a name=\"hpo-HP.580002991\"> </a></td><td>Abnormality of fibula morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001849<a name=\"hpo-HP.580001849\"> </a></td><td>Foot oligodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0006507<a name=\"hpo-HP.580006507\"> </a></td><td>Aplasia/hypoplasia of the humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0005613<a name=\"hpo-HP.580005613\"> </a></td><td>Aplasia/hypoplasia of the femur</td></tr><tr><td style=\"white-space:nowrap\">HP:0006492<a name=\"hpo-HP.580006492\"> </a></td><td>Aplasia/Hypoplasia of the fibula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000098<a name=\"hpo-HP.580000098\"> </a></td><td>Tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0003311<a name=\"hpo-HP.580003311\"> </a></td><td>Hypoplasia of the odontoid process</td></tr><tr><td style=\"white-space:nowrap\">HP:0005752<a name=\"hpo-HP.580005752\"> </a></td><td>Flattened moderately deformed vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0030039<a name=\"hpo-HP.580030039\"> </a></td><td>Fused thoracic vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0003304<a name=\"hpo-HP.580003304\"> </a></td><td>Spondylolysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001659<a name=\"hpo-HP.580001659\"> </a></td><td>Aortic regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002984<a name=\"hpo-HP.580002984\"> </a></td><td>Hypoplasia of the radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0009944<a name=\"hpo-HP.580009944\"> </a></td><td>Partial duplication of thumb phalanx</td></tr><tr><td style=\"white-space:nowrap\">HP:0005819<a name=\"hpo-HP.580005819\"> </a></td><td>Short middle phalanx of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0002110<a name=\"hpo-HP.580002110\"> </a></td><td>Bronchiectasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001677<a name=\"hpo-HP.580001677\"> </a></td><td>Coronary artery atherosclerosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001737<a name=\"hpo-HP.580001737\"> </a></td><td>Pancreatic cysts</td></tr><tr><td style=\"white-space:nowrap\">HP:0005113<a name=\"hpo-HP.580005113\"> </a></td><td>Aortic arch aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003022<a name=\"hpo-HP.580003022\"> </a></td><td>Hypoplasia of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0002205<a name=\"hpo-HP.580002205\"> </a></td><td>Recurrent respiratory infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0001669<a name=\"hpo-HP.580001669\"> </a></td><td>Transposition of the great arteries</td></tr><tr><td style=\"white-space:nowrap\">HP:0001716<a name=\"hpo-HP.580001716\"> </a></td><td>Wolff-Parkinson-White syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002758<a name=\"hpo-HP.580002758\"> </a></td><td>Osteoarthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002037<a name=\"hpo-HP.580002037\"> </a></td><td>Inflammation of the large intestine</td></tr><tr><td style=\"white-space:nowrap\">HP:0009892<a name=\"hpo-HP.580009892\"> </a></td><td>Anotia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011331<a name=\"hpo-HP.580011331\"> </a></td><td>Hemifacial atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0009118<a name=\"hpo-HP.580009118\"> </a></td><td>Aplasia/Hypoplasia of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0009940<a name=\"hpo-HP.580009940\"> </a></td><td>Asymmetry of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000682<a name=\"hpo-HP.580000682\"> </a></td><td>Abnormality of dental enamel</td></tr><tr><td style=\"white-space:nowrap\">HP:0009908<a name=\"hpo-HP.580009908\"> </a></td><td>Anterior creases of earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001541<a name=\"hpo-HP.580001541\"> </a></td><td>Ascites</td></tr><tr><td style=\"white-space:nowrap\">HP:0006687<a name=\"hpo-HP.580006687\"> </a></td><td>Aortic tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0010535<a name=\"hpo-HP.580010535\"> </a></td><td>Sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0100633<a name=\"hpo-HP.580100633\"> </a></td><td>Esophagitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002105<a name=\"hpo-HP.580002105\"> </a></td><td>Hemoptysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002613<a name=\"hpo-HP.580002613\"> </a></td><td>Biliary cirrhosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004469<a name=\"hpo-HP.580004469\"> </a></td><td>Chronic bronchitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002720<a name=\"hpo-HP.580002720\"> </a></td><td>Decreased circulating IgA level</td></tr><tr><td style=\"white-space:nowrap\">HP:0002904<a name=\"hpo-HP.580002904\"> </a></td><td>Hyperbilirubinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003237<a name=\"hpo-HP.580003237\"> </a></td><td>Increased circulating IgG level</td></tr><tr><td style=\"white-space:nowrap\">HP:0003262<a name=\"hpo-HP.580003262\"> </a></td><td>Smooth muscle antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0011227<a name=\"hpo-HP.580011227\"> </a></td><td>Elevated C-reactive protein level</td></tr><tr><td style=\"white-space:nowrap\">HP:0001852<a name=\"hpo-HP.580001852\"> </a></td><td>Sandal gap</td></tr><tr><td style=\"white-space:nowrap\">HP:0004381<a name=\"hpo-HP.580004381\"> </a></td><td>Supravalvular aortic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100700<a name=\"hpo-HP.580100700\"> </a></td><td>Abnormal arachnoid mater morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002624<a name=\"hpo-HP.580002624\"> </a></td><td>Abnormal venous morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002289<a name=\"hpo-HP.580002289\"> </a></td><td>Alopecia universalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0009588<a name=\"hpo-HP.580009588\"> </a></td><td>Vestibular Schwannoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001648<a name=\"hpo-HP.580001648\"> </a></td><td>Cor pulmonale</td></tr><tr><td style=\"white-space:nowrap\">HP:0002091<a name=\"hpo-HP.580002091\"> </a></td><td>Restrictive ventilatory defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002092<a name=\"hpo-HP.580002092\"> </a></td><td>Pulmonary arterial hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0002113<a name=\"hpo-HP.580002113\"> </a></td><td>Pulmonary infiltrates</td></tr><tr><td style=\"white-space:nowrap\">HP:0003138<a name=\"hpo-HP.580003138\"> </a></td><td>Increased blood urea nitrogen</td></tr><tr><td style=\"white-space:nowrap\">HP:0003259<a name=\"hpo-HP.580003259\"> </a></td><td>Elevated serum creatinine</td></tr><tr><td style=\"white-space:nowrap\">HP:0005180<a name=\"hpo-HP.580005180\"> </a></td><td>Tricuspid regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0012585<a name=\"hpo-HP.580012585\"> </a></td><td>Renal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005133<a name=\"hpo-HP.580005133\"> </a></td><td>Right ventricular dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005575<a name=\"hpo-HP.580005575\"> </a></td><td>Hemolytic-uremic syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0001697<a name=\"hpo-HP.580001697\"> </a></td><td>Abnormal pericardium morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012486<a name=\"hpo-HP.580012486\"> </a></td><td>Myelitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002385<a name=\"hpo-HP.580002385\"> </a></td><td>Paraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006706<a name=\"hpo-HP.580006706\"> </a></td><td>Cystic liver disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0010880<a name=\"hpo-HP.580010880\"> </a></td><td>Increased nuchal translucency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000457<a name=\"hpo-HP.580000457\"> </a></td><td>Depressed nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0002263<a name=\"hpo-HP.580002263\"> </a></td><td>Exaggerated cupid's bow</td></tr><tr><td style=\"white-space:nowrap\">HP:0002500<a name=\"hpo-HP.580002500\"> </a></td><td>Abnormality of the cerebral white matter</td></tr><tr><td style=\"white-space:nowrap\">HP:0002835<a name=\"hpo-HP.580002835\"> </a></td><td>Aspiration</td></tr><tr><td style=\"white-space:nowrap\">HP:0000600<a name=\"hpo-HP.580000600\"> </a></td><td>Abnormality of the pharynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0004327<a name=\"hpo-HP.580004327\"> </a></td><td>Abnormal vitreous humor morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0004378<a name=\"hpo-HP.580004378\"> </a></td><td>Abnormality of the anus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012374<a name=\"hpo-HP.580012374\"> </a></td><td>obsolete Abnormal globe morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100768<a name=\"hpo-HP.580100768\"> </a></td><td>Choriocarcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0030991<a name=\"hpo-HP.580030991\"> </a></td><td>Sclerosing cholangitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006510<a name=\"hpo-HP.580006510\"> </a></td><td>Chronic pulmonary obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0000710<a name=\"hpo-HP.580000710\"> </a></td><td>Hyperorality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001270<a name=\"hpo-HP.580001270\"> </a></td><td>Motor delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0001548<a name=\"hpo-HP.580001548\"> </a></td><td>Overgrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002311<a name=\"hpo-HP.580002311\"> </a></td><td>Incoordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0006288<a name=\"hpo-HP.580006288\"> </a></td><td>Advanced eruption of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0006323<a name=\"hpo-HP.580006323\"> </a></td><td>Premature loss of primary teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009890<a name=\"hpo-HP.580009890\"> </a></td><td>High anterior hairline</td></tr><tr><td style=\"white-space:nowrap\">HP:0100034<a name=\"hpo-HP.580100034\"> </a></td><td>Motor tics</td></tr><tr><td style=\"white-space:nowrap\">HP:0100035<a name=\"hpo-HP.580100035\"> </a></td><td>Phonic tics</td></tr><tr><td style=\"white-space:nowrap\">HP:0000348<a name=\"hpo-HP.580000348\"> </a></td><td>High forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0001520<a name=\"hpo-HP.580001520\"> </a></td><td>Large for gestational age</td></tr><tr><td style=\"white-space:nowrap\">HP:0001239<a name=\"hpo-HP.580001239\"> </a></td><td>Wrist flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0007359<a name=\"hpo-HP.580007359\"> </a></td><td>Focal-onset seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000430<a name=\"hpo-HP.580000430\"> </a></td><td>Underdeveloped nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0007400<a name=\"hpo-HP.580007400\"> </a></td><td>Irregular hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0100495<a name=\"hpo-HP.580100495\"> </a></td><td>Mastocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012378<a name=\"hpo-HP.580012378\"> </a></td><td>Fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002046<a name=\"hpo-HP.580002046\"> </a></td><td>Heat intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0003270<a name=\"hpo-HP.580003270\"> </a></td><td>Abdominal distention</td></tr><tr><td style=\"white-space:nowrap\">HP:0002180<a name=\"hpo-HP.580002180\"> </a></td><td>Neurodegeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0003493<a name=\"hpo-HP.580003493\"> </a></td><td>Antinuclear antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0030057<a name=\"hpo-HP.580030057\"> </a></td><td>Autoimmune antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0006802<a name=\"hpo-HP.580006802\"> </a></td><td>Abnormal anterior horn cell morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000064<a name=\"hpo-HP.580000064\"> </a></td><td>Hypoplastic labia minora</td></tr><tr><td style=\"white-space:nowrap\">HP:0000338<a name=\"hpo-HP.580000338\"> </a></td><td>Hypomimic face</td></tr><tr><td style=\"white-space:nowrap\">HP:0001642<a name=\"hpo-HP.580001642\"> </a></td><td>Pulmonic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011344<a name=\"hpo-HP.580011344\"> </a></td><td>Severe global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0200007<a name=\"hpo-HP.580200007\"> </a></td><td>Abnormal size of the palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0004464<a name=\"hpo-HP.580004464\"> </a></td><td>Postauricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0000130<a name=\"hpo-HP.580000130\"> </a></td><td>Abnormality of the uterus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000137<a name=\"hpo-HP.580000137\"> </a></td><td>Abnormality of the ovary</td></tr><tr><td style=\"white-space:nowrap\">HP:0000142<a name=\"hpo-HP.580000142\"> </a></td><td>Abnormal vagina morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000370<a name=\"hpo-HP.580000370\"> </a></td><td>Abnormality of the middle ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0011787<a name=\"hpo-HP.580011787\"> </a></td><td>Central hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000274<a name=\"hpo-HP.580000274\"> </a></td><td>Small face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000446<a name=\"hpo-HP.580000446\"> </a></td><td>Narrow nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000622<a name=\"hpo-HP.580000622\"> </a></td><td>Blurred vision</td></tr><tr><td style=\"white-space:nowrap\">HP:0001245<a name=\"hpo-HP.580001245\"> </a></td><td>Small thenar eminence</td></tr><tr><td style=\"white-space:nowrap\">HP:0009601<a name=\"hpo-HP.580009601\"> </a></td><td>Aplasia/Hypoplasia of the thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0011343<a name=\"hpo-HP.580011343\"> </a></td><td>Moderate global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0000419<a name=\"hpo-HP.580000419\"> </a></td><td>Abnormality of the nasal septum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000502<a name=\"hpo-HP.580000502\"> </a></td><td>Abnormal conjunctiva morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000591<a name=\"hpo-HP.580000591\"> </a></td><td>Abnormal sclera morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000615<a name=\"hpo-HP.580000615\"> </a></td><td>Abnormal pupil morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001163<a name=\"hpo-HP.580001163\"> </a></td><td>Abnormality of the metacarpal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0001832<a name=\"hpo-HP.580001832\"> </a></td><td>Abnormal metatarsal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001850<a name=\"hpo-HP.580001850\"> </a></td><td>Abnormality of the tarsal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0010490<a name=\"hpo-HP.580010490\"> </a></td><td>Abnormality of the palmar creases</td></tr><tr><td style=\"white-space:nowrap\">HP:0010881<a name=\"hpo-HP.580010881\"> </a></td><td>Abnormality of the umbilical cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0009113<a name=\"hpo-HP.580009113\"> </a></td><td>Diaphragmatic weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0011664<a name=\"hpo-HP.580011664\"> </a></td><td>Left ventricular noncompaction cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100240<a name=\"hpo-HP.580100240\"> </a></td><td>Synostosis of joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0001838<a name=\"hpo-HP.580001838\"> </a></td><td>Rocker bottom foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0003717<a name=\"hpo-HP.580003717\"> </a></td><td>Minimal subcutaneous fat</td></tr><tr><td style=\"white-space:nowrap\">HP:0001339<a name=\"hpo-HP.580001339\"> </a></td><td>Lissencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001591<a name=\"hpo-HP.580001591\"> </a></td><td>Bell-shaped thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0002655<a name=\"hpo-HP.580002655\"> </a></td><td>Spondyloepiphyseal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002983<a name=\"hpo-HP.580002983\"> </a></td><td>Micromelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003016<a name=\"hpo-HP.580003016\"> </a></td><td>Metaphyseal widening</td></tr><tr><td style=\"white-space:nowrap\">HP:0009826<a name=\"hpo-HP.580009826\"> </a></td><td>Limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0004488<a name=\"hpo-HP.580004488\"> </a></td><td>Macrocephaly at birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001695<a name=\"hpo-HP.580001695\"> </a></td><td>Cardiac arrest</td></tr><tr><td style=\"white-space:nowrap\">HP:0001712<a name=\"hpo-HP.580001712\"> </a></td><td>Left ventricular hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100775<a name=\"hpo-HP.580100775\"> </a></td><td>Dural ectasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000846<a name=\"hpo-HP.580000846\"> </a></td><td>Adrenal insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002925<a name=\"hpo-HP.580002925\"> </a></td><td>Increased thyroid-stimulating hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0100646<a name=\"hpo-HP.580100646\"> </a></td><td>Thyroiditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000836<a name=\"hpo-HP.580000836\"> </a></td><td>Hyperthyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0004414<a name=\"hpo-HP.580004414\"> </a></td><td>Abnormality of the pulmonary artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0000465<a name=\"hpo-HP.580000465\"> </a></td><td>Webbed neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000723<a name=\"hpo-HP.580000723\"> </a></td><td>Restrictive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0002253<a name=\"hpo-HP.580002253\"> </a></td><td>Colonic diverticula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001310<a name=\"hpo-HP.580001310\"> </a></td><td>Dysmetria</td></tr><tr><td style=\"white-space:nowrap\">HP:0000093<a name=\"hpo-HP.580000093\"> </a></td><td>Proteinuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002907<a name=\"hpo-HP.580002907\"> </a></td><td>Microscopic hematuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0003073<a name=\"hpo-HP.580003073\"> </a></td><td>Hypoalbuminemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004315<a name=\"hpo-HP.580004315\"> </a></td><td>Decreased circulating IgG level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000795<a name=\"hpo-HP.580000795\"> </a></td><td>Abnormality of the urethra</td></tr><tr><td style=\"white-space:nowrap\">HP:0001015<a name=\"hpo-HP.580001015\"> </a></td><td>Prominent superficial veins</td></tr><tr><td style=\"white-space:nowrap\">HP:0004691<a name=\"hpo-HP.580004691\"> </a></td><td>2-3 toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005328<a name=\"hpo-HP.580005328\"> </a></td><td>Progeroid facial appearance</td></tr><tr><td style=\"white-space:nowrap\">HP:0005487<a name=\"hpo-HP.580005487\"> </a></td><td>Prominent metopic ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0007552<a name=\"hpo-HP.580007552\"> </a></td><td>Abnormal subcutaneous fat tissue distribution</td></tr><tr><td style=\"white-space:nowrap\">HP:0100678<a name=\"hpo-HP.580100678\"> </a></td><td>Premature skin wrinkling</td></tr><tr><td style=\"white-space:nowrap\">HP:0031137<a name=\"hpo-HP.580031137\"> </a></td><td>Storage in hepatocytes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002521<a name=\"hpo-HP.580002521\"> </a></td><td>Hypsarrhythmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005390<a name=\"hpo-HP.580005390\"> </a></td><td>Recurrent opportunistic infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0002716<a name=\"hpo-HP.580002716\"> </a></td><td>Lymphadenopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005379<a name=\"hpo-HP.580005379\"> </a></td><td>obsolete Severe T lymphocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004432<a name=\"hpo-HP.580004432\"> </a></td><td>Agammaglobulinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006695<a name=\"hpo-HP.580006695\"> </a></td><td>Atrioventricular canal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0001733<a name=\"hpo-HP.580001733\"> </a></td><td>Pancreatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002350<a name=\"hpo-HP.580002350\"> </a></td><td>Cerebellar cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0012110<a name=\"hpo-HP.580012110\"> </a></td><td>Hypoplasia of the pons</td></tr><tr><td style=\"white-space:nowrap\">HP:0001948<a name=\"hpo-HP.580001948\"> </a></td><td>Alkalosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003113<a name=\"hpo-HP.580003113\"> </a></td><td>Hypochloremia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003155<a name=\"hpo-HP.580003155\"> </a></td><td>Elevated alkaline phosphatase</td></tr><tr><td style=\"white-space:nowrap\">HP:0003542<a name=\"hpo-HP.580003542\"> </a></td><td>Increased serum pyruvate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000421<a name=\"hpo-HP.580000421\"> </a></td><td>Epistaxis</td></tr><tr><td style=\"white-space:nowrap\">HP:0200136<a name=\"hpo-HP.580200136\"> </a></td><td>Oral-pharyngeal dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000805<a name=\"hpo-HP.580000805\"> </a></td><td>Enuresis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005616<a name=\"hpo-HP.580005616\"> </a></td><td>Accelerated skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002459<a name=\"hpo-HP.580002459\"> </a></td><td>obsolete Dysautonomia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007302<a name=\"hpo-HP.580007302\"> </a></td><td>Bipolar affective disorder</td></tr><tr><td style=\"white-space:nowrap\">HP:0100602<a name=\"hpo-HP.580100602\"> </a></td><td>Preeclampsia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100508<a name=\"hpo-HP.580100508\"> </a></td><td>Abnormality of vitamin metabolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001140<a name=\"hpo-HP.580001140\"> </a></td><td>Limbal dermoid</td></tr><tr><td style=\"white-space:nowrap\">HP:0000143<a name=\"hpo-HP.580000143\"> </a></td><td>Rectovaginal fistula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001746<a name=\"hpo-HP.580001746\"> </a></td><td>Asplenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012715<a name=\"hpo-HP.580012715\"> </a></td><td>Profound hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001748<a name=\"hpo-HP.580001748\"> </a></td><td>Polysplenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003072<a name=\"hpo-HP.580003072\"> </a></td><td>Hypercalcemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002905<a name=\"hpo-HP.580002905\"> </a></td><td>Hyperphosphatemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002901<a name=\"hpo-HP.580002901\"> </a></td><td>Hypocalcemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001367<a name=\"hpo-HP.580001367\"> </a></td><td>Abnormal joint morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0010562<a name=\"hpo-HP.580010562\"> </a></td><td>Keloids</td></tr><tr><td style=\"white-space:nowrap\">HP:0004430<a name=\"hpo-HP.580004430\"> </a></td><td>Severe combined immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000003<a name=\"hpo-HP.580000003\"> </a></td><td>Multicystic kidney dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010980<a name=\"hpo-HP.580010980\"> </a></td><td>Hyperlipoproteinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002155<a name=\"hpo-HP.580002155\"> </a></td><td>Hypertriglyceridemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000520<a name=\"hpo-HP.580000520\"> </a></td><td>Proptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000180<a name=\"hpo-HP.580000180\"> </a></td><td>Lobulated tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0005486<a name=\"hpo-HP.580005486\"> </a></td><td>Small fontanelle</td></tr><tr><td style=\"white-space:nowrap\">HP:0000891<a name=\"hpo-HP.580000891\"> </a></td><td>Cervical ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002557<a name=\"hpo-HP.580002557\"> </a></td><td>Hypoplastic nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0009112<a name=\"hpo-HP.580009112\"> </a></td><td>Aplasia of the left hemidiaphragm</td></tr><tr><td style=\"white-space:nowrap\">HP:0001719<a name=\"hpo-HP.580001719\"> </a></td><td>Double outlet right ventricle</td></tr><tr><td style=\"white-space:nowrap\">HP:0001682<a name=\"hpo-HP.580001682\"> </a></td><td>Subvalvular aortic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001667<a name=\"hpo-HP.580001667\"> </a></td><td>Right ventricular hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002101<a name=\"hpo-HP.580002101\"> </a></td><td>Abnormal lung lobation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002202<a name=\"hpo-HP.580002202\"> </a></td><td>Pleural effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002566<a name=\"hpo-HP.580002566\"> </a></td><td>Intestinal malrotation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004510<a name=\"hpo-HP.580004510\"> </a></td><td>Pancreatic islet-cell hyperplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001747<a name=\"hpo-HP.580001747\"> </a></td><td>Accessory spleen</td></tr><tr><td style=\"white-space:nowrap\">HP:0002181<a name=\"hpo-HP.580002181\"> </a></td><td>Cerebral edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000967<a name=\"hpo-HP.580000967\"> </a></td><td>Petechiae</td></tr><tr><td style=\"white-space:nowrap\">HP:0009702<a name=\"hpo-HP.580009702\"> </a></td><td>Carpal synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000927<a name=\"hpo-HP.580000927\"> </a></td><td>Abnormality of skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004348<a name=\"hpo-HP.580004348\"> </a></td><td>Abnormality of bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0003019<a name=\"hpo-HP.580003019\"> </a></td><td>Abnormality of the wrist</td></tr><tr><td style=\"white-space:nowrap\">HP:0003063<a name=\"hpo-HP.580003063\"> </a></td><td>Abnormality of the humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001059<a name=\"hpo-HP.580001059\"> </a></td><td>Pterygium</td></tr><tr><td style=\"white-space:nowrap\">HP:0001528<a name=\"hpo-HP.580001528\"> </a></td><td>Hemihypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011228<a name=\"hpo-HP.580011228\"> </a></td><td>Horizontal eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000766<a name=\"hpo-HP.580000766\"> </a></td><td>Abnormality of the sternum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001254<a name=\"hpo-HP.580001254\"> </a></td><td>Lethargy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002360<a name=\"hpo-HP.580002360\"> </a></td><td>Sleep disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0001063<a name=\"hpo-HP.580001063\"> </a></td><td>Acrocyanosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001769<a name=\"hpo-HP.580001769\"> </a></td><td>Broad foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0010280<a name=\"hpo-HP.580010280\"> </a></td><td>Stomatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001288<a name=\"hpo-HP.580001288\"> </a></td><td>Gait disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0008330<a name=\"hpo-HP.580008330\"> </a></td><td>Reduced von Willebrand factor activity</td></tr><tr><td style=\"white-space:nowrap\">HP:0001954<a name=\"hpo-HP.580001954\"> </a></td><td>Recurrent fever</td></tr><tr><td style=\"white-space:nowrap\">HP:0004311<a name=\"hpo-HP.580004311\"> </a></td><td>Abnormal macrophage morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012539<a name=\"hpo-HP.580012539\"> </a></td><td>Non-Hodgkin lymphoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0002074<a name=\"hpo-HP.580002074\"> </a></td><td>Increased neuronal autofluorescent lipopigment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002973<a name=\"hpo-HP.580002973\"> </a></td><td>Abnormality of the forearm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003203<a name=\"hpo-HP.580003203\"> </a></td><td>Impaired oxidative burst</td></tr><tr><td style=\"white-space:nowrap\">HP:0003027<a name=\"hpo-HP.580003027\"> </a></td><td>Mesomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002754<a name=\"hpo-HP.580002754\"> </a></td><td>Osteomyelitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004431<a name=\"hpo-HP.580004431\"> </a></td><td>Complement deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0001258<a name=\"hpo-HP.580001258\"> </a></td><td>Spastic paraplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012811<a name=\"hpo-HP.580012811\"> </a></td><td>Wide nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0011832<a name=\"hpo-HP.580011832\"> </a></td><td>Narrow nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000288<a name=\"hpo-HP.580000288\"> </a></td><td>Abnormality of the philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002357<a name=\"hpo-HP.580002357\"> </a></td><td>Dysphasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000871<a name=\"hpo-HP.580000871\"> </a></td><td>Panhypopituitarism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000233<a name=\"hpo-HP.580000233\"> </a></td><td>Thin vermilion border</td></tr><tr><td style=\"white-space:nowrap\">HP:0003281<a name=\"hpo-HP.580003281\"> </a></td><td>Increased serum ferritin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010752<a name=\"hpo-HP.580010752\"> </a></td><td>Cleft mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000437<a name=\"hpo-HP.580000437\"> </a></td><td>Depressed nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000453<a name=\"hpo-HP.580000453\"> </a></td><td>Choanal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000863<a name=\"hpo-HP.580000863\"> </a></td><td>Central diabetes insipidus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000058<a name=\"hpo-HP.580000058\"> </a></td><td>Abnormality of the labia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007418<a name=\"hpo-HP.580007418\"> </a></td><td>Alopecia totalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100765<a name=\"hpo-HP.580100765\"> </a></td><td>Abnormality of the tonsils</td></tr><tr><td style=\"white-space:nowrap\">HP:0100747<a name=\"hpo-HP.580100747\"> </a></td><td>Macrodactyly of toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002109<a name=\"hpo-HP.580002109\"> </a></td><td>obsolete Abnormality of the bronchi</td></tr><tr><td style=\"white-space:nowrap\">HP:0011950<a name=\"hpo-HP.580011950\"> </a></td><td>Bronchiolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002850<a name=\"hpo-HP.580002850\"> </a></td><td>Decreased circulating total IgM</td></tr><tr><td style=\"white-space:nowrap\">HP:0001395<a name=\"hpo-HP.580001395\"> </a></td><td>Hepatic fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010701<a name=\"hpo-HP.580010701\"> </a></td><td>Abnormal immunoglobulin level</td></tr><tr><td style=\"white-space:nowrap\">HP:0009928<a name=\"hpo-HP.580009928\"> </a></td><td>Thick nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0010807<a name=\"hpo-HP.580010807\"> </a></td><td>Open bite</td></tr><tr><td style=\"white-space:nowrap\">HP:0002126<a name=\"hpo-HP.580002126\"> </a></td><td>Polymicrogyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002900<a name=\"hpo-HP.580002900\"> </a></td><td>Hypokalemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000155<a name=\"hpo-HP.580000155\"> </a></td><td>Oral ulcer</td></tr><tr><td style=\"white-space:nowrap\">HP:0000135<a name=\"hpo-HP.580000135\"> </a></td><td>Hypogonadism</td></tr><tr><td style=\"white-space:nowrap\">HP:0100783<a name=\"hpo-HP.580100783\"> </a></td><td>Breast aplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000336<a name=\"hpo-HP.580000336\"> </a></td><td>Prominent supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0010557<a name=\"hpo-HP.580010557\"> </a></td><td>Overlapping fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0005100<a name=\"hpo-HP.580005100\"> </a></td><td>Premature birth following premature rupture of fetal membranes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002594<a name=\"hpo-HP.580002594\"> </a></td><td>Pancreatic hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010109<a name=\"hpo-HP.580010109\"> </a></td><td>Short hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0002334<a name=\"hpo-HP.580002334\"> </a></td><td>Abnormality of the cerebellar vermis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003326<a name=\"hpo-HP.580003326\"> </a></td><td>Myalgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001645<a name=\"hpo-HP.580001645\"> </a></td><td>Sudden cardiac death</td></tr><tr><td style=\"white-space:nowrap\">HP:0001612<a name=\"hpo-HP.580001612\"> </a></td><td>Weak cry</td></tr><tr><td style=\"white-space:nowrap\">HP:0001618<a name=\"hpo-HP.580001618\"> </a></td><td>Dysphonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001336<a name=\"hpo-HP.580001336\"> </a></td><td>Myoclonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001283<a name=\"hpo-HP.580001283\"> </a></td><td>Bulbar palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002080<a name=\"hpo-HP.580002080\"> </a></td><td>Intention tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002174<a name=\"hpo-HP.580002174\"> </a></td><td>Postural tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002064<a name=\"hpo-HP.580002064\"> </a></td><td>Spastic gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0009800<a name=\"hpo-HP.580009800\"> </a></td><td>Maternal diabetes</td></tr><tr><td style=\"white-space:nowrap\">HP:0001662<a name=\"hpo-HP.580001662\"> </a></td><td>Bradycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006595<a name=\"hpo-HP.580006595\"> </a></td><td>Scapulohumeral synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005815<a name=\"hpo-HP.580005815\"> </a></td><td>Supernumerary ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000307<a name=\"hpo-HP.580000307\"> </a></td><td>Pointed chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0012371<a name=\"hpo-HP.580012371\"> </a></td><td>Hyperplasia of midface</td></tr><tr><td style=\"white-space:nowrap\">HP:0002643<a name=\"hpo-HP.580002643\"> </a></td><td>Neonatal respiratory distress</td></tr><tr><td style=\"white-space:nowrap\">HP:0002093<a name=\"hpo-HP.580002093\"> </a></td><td>Respiratory insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0010310<a name=\"hpo-HP.580010310\"> </a></td><td>Chylothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0006376<a name=\"hpo-HP.580006376\"> </a></td><td>Limited elbow flexion</td></tr><tr><td style=\"white-space:nowrap\">HP:0006467<a name=\"hpo-HP.580006467\"> </a></td><td>Limited shoulder movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010505<a name=\"hpo-HP.580010505\"> </a></td><td>Limitation of movement at ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0010501<a name=\"hpo-HP.580010501\"> </a></td><td>Limitation of knee mobility</td></tr><tr><td style=\"white-space:nowrap\">HP:0009896<a name=\"hpo-HP.580009896\"> </a></td><td>Abnormality of the antitragus</td></tr><tr><td style=\"white-space:nowrap\">HP:0004404<a name=\"hpo-HP.580004404\"> </a></td><td>Abnormal nipple morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011957<a name=\"hpo-HP.580011957\"> </a></td><td>Abnormal pectoral muscle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000777<a name=\"hpo-HP.580000777\"> </a></td><td>Abnormality of the thymus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000418<a name=\"hpo-HP.580000418\"> </a></td><td>Narrow nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0001572<a name=\"hpo-HP.580001572\"> </a></td><td>Macrodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002967<a name=\"hpo-HP.580002967\"> </a></td><td>Cubitus valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000988<a name=\"hpo-HP.580000988\"> </a></td><td>Skin rash</td></tr><tr><td style=\"white-space:nowrap\">HP:0009733<a name=\"hpo-HP.580009733\"> </a></td><td>Glioma</td></tr><tr><td style=\"white-space:nowrap\">HP:0012452<a name=\"hpo-HP.580012452\"> </a></td><td>Restless legs</td></tr><tr><td style=\"white-space:nowrap\">HP:0100031<a name=\"hpo-HP.580100031\"> </a></td><td>Neoplasm of the thyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0030127<a name=\"hpo-HP.580030127\"> </a></td><td>Endometriosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000123<a name=\"hpo-HP.580000123\"> </a></td><td>Nephritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001974<a name=\"hpo-HP.580001974\"> </a></td><td>Leukocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010976<a name=\"hpo-HP.580010976\"> </a></td><td>B lymphocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000010<a name=\"hpo-HP.580000010\"> </a></td><td>Recurrent urinary tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0100807<a name=\"hpo-HP.580100807\"> </a></td><td>Long fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0000653<a name=\"hpo-HP.580000653\"> </a></td><td>Sparse eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0000171<a name=\"hpo-HP.580000171\"> </a></td><td>Microglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002575<a name=\"hpo-HP.580002575\"> </a></td><td>Tracheoesophageal fistula</td></tr><tr><td style=\"white-space:nowrap\">HP:0009933<a name=\"hpo-HP.580009933\"> </a></td><td>Narrow naris</td></tr><tr><td style=\"white-space:nowrap\">HP:0000883<a name=\"hpo-HP.580000883\"> </a></td><td>Thin ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000121<a name=\"hpo-HP.580000121\"> </a></td><td>Nephrocalcinosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001349<a name=\"hpo-HP.580001349\"> </a></td><td>Facial diplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012037<a name=\"hpo-HP.580012037\"> </a></td><td>Pectoralis amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100560<a name=\"hpo-HP.580100560\"> </a></td><td>Upper limb asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0005684<a name=\"hpo-HP.580005684\"> </a></td><td>Distal arthrogryposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010722<a name=\"hpo-HP.580010722\"> </a></td><td>Asymmetry of the ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0009380<a name=\"hpo-HP.580009380\"> </a></td><td>Aplasia of the fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0001657<a name=\"hpo-HP.580001657\"> </a></td><td>Prolonged QT interval</td></tr><tr><td style=\"white-space:nowrap\">HP:0002040<a name=\"hpo-HP.580002040\"> </a></td><td>Esophageal varix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000613<a name=\"hpo-HP.580000613\"> </a></td><td>Photophobia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000561<a name=\"hpo-HP.580000561\"> </a></td><td>Absent eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002223<a name=\"hpo-HP.580002223\"> </a></td><td>Absent eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0002591<a name=\"hpo-HP.580002591\"> </a></td><td>Polyphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002373<a name=\"hpo-HP.580002373\"> </a></td><td>Febrile seizure (within the age range of 3 months to 6 years)</td></tr><tr><td style=\"white-space:nowrap\">HP:0002419<a name=\"hpo-HP.580002419\"> </a></td><td>Molar tooth sign on MRI</td></tr><tr><td style=\"white-space:nowrap\">HP:0001010<a name=\"hpo-HP.580001010\"> </a></td><td>Hypopigmentation of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0005772<a name=\"hpo-HP.580005772\"> </a></td><td>Aplasia/Hypoplasia of the tibia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002211<a name=\"hpo-HP.580002211\"> </a></td><td>White forelock</td></tr><tr><td style=\"white-space:nowrap\">HP:0007126<a name=\"hpo-HP.580007126\"> </a></td><td>Proximal amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003798<a name=\"hpo-HP.580003798\"> </a></td><td>Nemaline bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0006533<a name=\"hpo-HP.580006533\"> </a></td><td>Bronchodysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003391<a name=\"hpo-HP.580003391\"> </a></td><td>Gowers sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0000771<a name=\"hpo-HP.580000771\"> </a></td><td>Gynecomastia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100785<a name=\"hpo-HP.580100785\"> </a></td><td>Insomnia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010529<a name=\"hpo-HP.580010529\"> </a></td><td>Echolalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000363<a name=\"hpo-HP.580000363\"> </a></td><td>Abnormality of earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002612<a name=\"hpo-HP.580002612\"> </a></td><td>Congenital hepatic fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006721<a name=\"hpo-HP.580006721\"> </a></td><td>Acute lymphoblastic leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001958<a name=\"hpo-HP.580001958\"> </a></td><td>Nonketotic hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003457<a name=\"hpo-HP.580003457\"> </a></td><td>EMG abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0010636<a name=\"hpo-HP.580010636\"> </a></td><td>Schizencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005266<a name=\"hpo-HP.580005266\"> </a></td><td>Intestinal polyp</td></tr><tr><td style=\"white-space:nowrap\">HP:0200063<a name=\"hpo-HP.580200063\"> </a></td><td>Colorectal polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001762<a name=\"hpo-HP.580001762\"> </a></td><td>Talipes equinovarus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000056<a name=\"hpo-HP.580000056\"> </a></td><td>Abnormality of the clitoris</td></tr><tr><td style=\"white-space:nowrap\">HP:0008655<a name=\"hpo-HP.580008655\"> </a></td><td>Aplasia/Hypoplasia of the fallopian tube</td></tr><tr><td style=\"white-space:nowrap\">HP:0002072<a name=\"hpo-HP.580002072\"> </a></td><td>Chorea</td></tr><tr><td style=\"white-space:nowrap\">HP:0008734<a name=\"hpo-HP.580008734\"> </a></td><td>Decreased testicular size</td></tr><tr><td style=\"white-space:nowrap\">HP:0002136<a name=\"hpo-HP.580002136\"> </a></td><td>Broad-based gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0010958<a name=\"hpo-HP.580010958\"> </a></td><td>Bilateral renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002510<a name=\"hpo-HP.580002510\"> </a></td><td>Spastic tetraplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003234<a name=\"hpo-HP.580003234\"> </a></td><td>Decreased plasma carnitine</td></tr><tr><td style=\"white-space:nowrap\">HP:0000720<a name=\"hpo-HP.580000720\"> </a></td><td>Mood swings</td></tr><tr><td style=\"white-space:nowrap\">HP:0012638<a name=\"hpo-HP.580012638\"> </a></td><td>Abnormal nervous system physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002803<a name=\"hpo-HP.580002803\"> </a></td><td>Congenital contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0000152<a name=\"hpo-HP.580000152\"> </a></td><td>Abnormality of head or neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0004377<a name=\"hpo-HP.580004377\"> </a></td><td>Hematological neoplasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0100006<a name=\"hpo-HP.580100006\"> </a></td><td>Neoplasm of the central nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0012759<a name=\"hpo-HP.580012759\"> </a></td><td>Neurodevelopmental abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0011805<a name=\"hpo-HP.580011805\"> </a></td><td>Abnormal skeletal muscle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003634<a name=\"hpo-HP.580003634\"> </a></td><td>Amyoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001507<a name=\"hpo-HP.580001507\"> </a></td><td>Growth abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001939<a name=\"hpo-HP.580001939\"> </a></td><td>Abnormality of metabolism/homeostasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011013<a name=\"hpo-HP.580011013\"> </a></td><td>Abnormal circulating carbohydrate concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0410008<a name=\"hpo-HP.580410008\"> </a></td><td>Abnormality of the peripheral nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0200134<a name=\"hpo-HP.580200134\"> </a></td><td>Epileptic encephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001881<a name=\"hpo-HP.580001881\"> </a></td><td>Abnormal leukocyte morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0005549<a name=\"hpo-HP.580005549\"> </a></td><td>obsolete Congenital neutropenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004439<a name=\"hpo-HP.580004439\"> </a></td><td>Craniofacial dysostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012443<a name=\"hpo-HP.580012443\"> </a></td><td>Abnormality of brain morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000202<a name=\"hpo-HP.580000202\"> </a></td><td>Oral cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0011842<a name=\"hpo-HP.580011842\"> </a></td><td>Abnormality of skeletal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003808<a name=\"hpo-HP.580003808\"> </a></td><td>Abnormal muscle tone</td></tr><tr><td style=\"white-space:nowrap\">HP:0001574<a name=\"hpo-HP.580001574\"> </a></td><td>Abnormality of the integument</td></tr><tr><td style=\"white-space:nowrap\">HP:0030056<a name=\"hpo-HP.580030056\"> </a></td><td>Uncombable hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0003549<a name=\"hpo-HP.580003549\"> </a></td><td>Abnormality of connective tissue</td></tr><tr><td style=\"white-space:nowrap\">HP:0030875<a name=\"hpo-HP.580030875\"> </a></td><td>Abnormality of pulmonary circulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000118<a name=\"hpo-HP.580000118\"> </a></td><td>Phenotypic abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0012469<a name=\"hpo-HP.580012469\"> </a></td><td>Infantile spasms</td></tr><tr><td style=\"white-space:nowrap\">HP:0032894<a name=\"hpo-HP.580032894\"> </a></td><td>Seizure precipitated by febrile infection</td></tr><tr><td style=\"white-space:nowrap\">HP:0100661<a name=\"hpo-HP.580100661\"> </a></td><td>Trigeminal neuralgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012207<a name=\"hpo-HP.580012207\"> </a></td><td>Reduced sperm motility</td></tr><tr><td style=\"white-space:nowrap\">HP:0000798<a name=\"hpo-HP.580000798\"> </a></td><td>Oligospermia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012864<a name=\"hpo-HP.580012864\"> </a></td><td>Abnormal sperm morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008232<a name=\"hpo-HP.580008232\"> </a></td><td>Elevated circulating follicle stimulating hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0040306<a name=\"hpo-HP.580040306\"> </a></td><td>Decreased male libido</td></tr><tr><td style=\"white-space:nowrap\">HP:0012208<a name=\"hpo-HP.580012208\"> </a></td><td>Immotile sperm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000027<a name=\"hpo-HP.580000027\"> </a></td><td>Azoospermia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000870<a name=\"hpo-HP.580000870\"> </a></td><td>Increased circulating prolactin concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0008187<a name=\"hpo-HP.580008187\"> </a></td><td>Absence of secondary sex characteristics</td></tr><tr><td style=\"white-space:nowrap\">HP:0010469<a name=\"hpo-HP.580010469\"> </a></td><td>Absent testis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011969<a name=\"hpo-HP.580011969\"> </a></td><td>Elevated circulating luteinizing hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0040171<a name=\"hpo-HP.580040171\"> </a></td><td>Decreased serum testosterone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0003251<a name=\"hpo-HP.580003251\"> </a></td><td>Male infertility</td></tr><tr><td style=\"white-space:nowrap\">HP:0009804<a name=\"hpo-HP.580009804\"> </a></td><td>Reduced number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000548<a name=\"hpo-HP.580000548\"> </a></td><td>Cone/cone-rod dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000546<a name=\"hpo-HP.580000546\"> </a></td><td>Retinal degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0008002<a name=\"hpo-HP.580008002\"> </a></td><td>Abnormality of macular pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000608<a name=\"hpo-HP.580000608\"> </a></td><td>Macular degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0030611<a name=\"hpo-HP.580030611\"> </a></td><td>Retinal pigment epithelial loss on macular OCT</td></tr><tr><td style=\"white-space:nowrap\">HP:0001135<a name=\"hpo-HP.580001135\"> </a></td><td>Chorioretinal dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030468<a name=\"hpo-HP.580030468\"> </a></td><td>Abnormal multifocal electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:00030532<a name=\"hpo-HP.5800030532\"> </a></td><td>Visual acuity test abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0007401<a name=\"hpo-HP.580007401\"> </a></td><td>Macular atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030466<a name=\"hpo-HP.580030466\"> </a></td><td>Abnormal full-field electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:007737<a name=\"hpo-HP.58007737\"> </a></td><td>Bone spicule pigmentation of the retina</td></tr><tr><td style=\"white-space:nowrap\">HP:0011342<a name=\"hpo-HP.580011342\"> </a></td><td>Mild global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0030610<a name=\"hpo-HP.580030610\"> </a></td><td>Photoreceptor outer segment loss on macular OCT</td></tr><tr><td style=\"white-space:nowrap\">HP:0007722<a name=\"hpo-HP.580007722\"> </a></td><td>Retinal pigment epithelial atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030493<a name=\"hpo-HP.580030493\"> </a></td><td>Abnormality of foveal pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0007843<a name=\"hpo-HP.580007843\"> </a></td><td>Attenuation of retinal blood vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0007754<a name=\"hpo-HP.580007754\"> </a></td><td>Macular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011509<a name=\"hpo-HP.580011509\"> </a></td><td>Macular hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0008527<a name=\"hpo-HP.580008527\"> </a></td><td>Congenital sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0200070<a name=\"hpo-HP.580200070\"> </a></td><td>Peripheral retinal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0007793<a name=\"hpo-HP.580007793\"> </a></td><td>Granular macular appearance</td></tr><tr><td style=\"white-space:nowrap\">HP:0007987<a name=\"hpo-HP.580007987\"> </a></td><td>Progressive visual field defects</td></tr><tr><td style=\"white-space:nowrap\">HP:0100817<a name=\"hpo-HP.580100817\"> </a></td><td>Renovascular hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0007868<a name=\"hpo-HP.580007868\"> </a></td><td>obsolete Age-related macular degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0030527<a name=\"hpo-HP.580030527\"> </a></td><td>Very severe constriction of peripheral visual field</td></tr><tr><td style=\"white-space:nowrap\">HP:0030551<a name=\"hpo-HP.580030551\"> </a></td><td>Visual acuity light perception with projection</td></tr><tr><td style=\"white-space:nowrap\">HP:0011505<a name=\"hpo-HP.580011505\"> </a></td><td>Cystoid macular edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0010442<a name=\"hpo-HP.580010442\"> </a></td><td>Polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0007642<a name=\"hpo-HP.580007642\"> </a></td><td>Congenital stationary night blindness</td></tr><tr><td style=\"white-space:nowrap\">HP:0009073<a name=\"hpo-HP.580009073\"> </a></td><td>Progressive proximal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003741<a name=\"hpo-HP.580003741\"> </a></td><td>Congenital muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100299<a name=\"hpo-HP.580100299\"> </a></td><td>Muscle fiber inclusion bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0003540<a name=\"hpo-HP.580003540\"> </a></td><td>Impaired platelet aggregation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010489<a name=\"hpo-HP.580010489\"> </a></td><td>Absent palmar crease</td></tr><tr><td style=\"white-space:nowrap\">HP:0009824<a name=\"hpo-HP.580009824\"> </a></td><td>Upper limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002395<a name=\"hpo-HP.580002395\"> </a></td><td>Lower limb hyperreflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001138<a name=\"hpo-HP.580001138\"> </a></td><td>Optic neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0007103<a name=\"hpo-HP.580007103\"> </a></td><td>Hypointensity of cerebral white matter on MRI</td></tr><tr><td style=\"white-space:nowrap\">HP:0003458<a name=\"hpo-HP.580003458\"> </a></td><td>EMG: myopathic abnormalities</td></tr><tr><td style=\"white-space:nowrap\">HP:0002987<a name=\"hpo-HP.580002987\"> </a></td><td>Elbow flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0006466<a name=\"hpo-HP.580006466\"> </a></td><td>Ankle flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0008458<a name=\"hpo-HP.580008458\"> </a></td><td>Progressive congenital scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000473<a name=\"hpo-HP.580000473\"> </a></td><td>Torticollis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011800<a name=\"hpo-HP.580011800\"> </a></td><td>Midface retrusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000597<a name=\"hpo-HP.580000597\"> </a></td><td>Ophthalmoparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005853<a name=\"hpo-HP.580005853\"> </a></td><td>Congenital foot contraction deformities</td></tr><tr><td style=\"white-space:nowrap\">HP:0007002<a name=\"hpo-HP.580007002\"> </a></td><td>Motor axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003327<a name=\"hpo-HP.580003327\"> </a></td><td>Axial muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003306<a name=\"hpo-HP.580003306\"> </a></td><td>Spinal rigidity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002068<a name=\"hpo-HP.580002068\"> </a></td><td>Neuromuscular dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001002<a name=\"hpo-HP.580001002\"> </a></td><td>obsolete Decreased subcutaneous fat</td></tr><tr><td style=\"white-space:nowrap\">HP:0002880<a name=\"hpo-HP.580002880\"> </a></td><td>obsolete Respiratory difficulties</td></tr><tr><td style=\"white-space:nowrap\">HP:0006829<a name=\"hpo-HP.580006829\"> </a></td><td>Severe muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011448<a name=\"hpo-HP.580011448\"> </a></td><td>Ankle clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0003487<a name=\"hpo-HP.580003487\"> </a></td><td>Babinski sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0002378<a name=\"hpo-HP.580002378\"> </a></td><td>Hand tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002747<a name=\"hpo-HP.580002747\"> </a></td><td>Respiratory insufficiency due to muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002579<a name=\"hpo-HP.580002579\"> </a></td><td>Gastrointestinal dysmotility</td></tr><tr><td style=\"white-space:nowrap\">HP:0001041<a name=\"hpo-HP.580001041\"> </a></td><td>Facial erythema</td></tr><tr><td style=\"white-space:nowrap\">HP:0040180<a name=\"hpo-HP.580040180\"> </a></td><td>Hyperkeratosis pilaris</td></tr><tr><td style=\"white-space:nowrap\">HP:0001382<a name=\"hpo-HP.580001382\"> </a></td><td>Joint hypermobility</td></tr><tr><td style=\"white-space:nowrap\">HP:0003722<a name=\"hpo-HP.580003722\"> </a></td><td>Neck flexor weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003323<a name=\"hpo-HP.580003323\"> </a></td><td>Progressive muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002380<a name=\"hpo-HP.580002380\"> </a></td><td>Fasciculations</td></tr><tr><td style=\"white-space:nowrap\">HP:0012785<a name=\"hpo-HP.580012785\"> </a></td><td>Flexion contracture of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0007936<a name=\"hpo-HP.580007936\"> </a></td><td>Restrictive external ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030319<a name=\"hpo-HP.580030319\"> </a></td><td>Weakness of facial musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0008936<a name=\"hpo-HP.580008936\"> </a></td><td>Muscular hypotonia of the trunk</td></tr><tr><td style=\"white-space:nowrap\">HP:0030230<a name=\"hpo-HP.580030230\"> </a></td><td>Central core regions in muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0011471<a name=\"hpo-HP.580011471\"> </a></td><td>Gastrostomy tube feeding in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001290<a name=\"hpo-HP.580001290\"> </a></td><td>Generalized hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002421<a name=\"hpo-HP.580002421\"> </a></td><td>Poor head control</td></tr><tr><td style=\"white-space:nowrap\">HP:0010301<a name=\"hpo-HP.580010301\"> </a></td><td>Spinal dysraphism</td></tr><tr><td style=\"white-space:nowrap\">HP:0004303<a name=\"hpo-HP.580004303\"> </a></td><td>Abnormal muscle fiber morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009046<a name=\"hpo-HP.580009046\"> </a></td><td>Difficulty running</td></tr><tr><td style=\"white-space:nowrap\">HP:0003715<a name=\"hpo-HP.580003715\"> </a></td><td>Myofibrillar myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000467<a name=\"hpo-HP.580000467\"> </a></td><td>Neck muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001999<a name=\"hpo-HP.580001999\"> </a></td><td>Abnormal facial shape</td></tr><tr><td style=\"white-space:nowrap\">HP:0002751<a name=\"hpo-HP.580002751\"> </a></td><td>Kyphoscoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030223<a name=\"hpo-HP.580030223\"> </a></td><td>Perseveration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002344<a name=\"hpo-HP.580002344\"> </a></td><td>Progressive neurologic deterioration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002522<a name=\"hpo-HP.580002522\"> </a></td><td>Areflexia of lower limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0003805<a name=\"hpo-HP.580003805\"> </a></td><td>Rimmed vacuoles</td></tr><tr><td style=\"white-space:nowrap\">HP:0005781<a name=\"hpo-HP.580005781\"> </a></td><td>Contractures of the large joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0040083<a name=\"hpo-HP.580040083\"> </a></td><td>Toe walking</td></tr><tr><td style=\"white-space:nowrap\">HP:0003749<a name=\"hpo-HP.580003749\"> </a></td><td>Pelvic girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0012444<a name=\"hpo-HP.580012444\"> </a></td><td>Brain atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003738<a name=\"hpo-HP.580003738\"> </a></td><td>Exercise-induced myalgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003756<a name=\"hpo-HP.580003756\"> </a></td><td>Skeletal myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002492<a name=\"hpo-HP.580002492\"> </a></td><td>Morphological abnormality of the corticospinal tract</td></tr><tr><td style=\"white-space:nowrap\">HP:0100302<a name=\"hpo-HP.580100302\"> </a></td><td>Muscle fiber tubuloreticular inclusions</td></tr><tr><td style=\"white-space:nowrap\">HP:0006817<a name=\"hpo-HP.580006817\"> </a></td><td>Aplasia/Hypoplasia of the cerebellar vermis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003473<a name=\"hpo-HP.580003473\"> </a></td><td>Fatigable weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002077<a name=\"hpo-HP.580002077\"> </a></td><td>Migraine with aura</td></tr><tr><td style=\"white-space:nowrap\">HP:0100559<a name=\"hpo-HP.580100559\"> </a></td><td>Lower limb asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0002079<a name=\"hpo-HP.580002079\"> </a></td><td>Hypoplasia of the corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002804<a name=\"hpo-HP.580002804\"> </a></td><td>Arthrogryposis multiplex congenita</td></tr><tr><td style=\"white-space:nowrap\">HP:0011623<a name=\"hpo-HP.580011623\"> </a></td><td>Muscular ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002191<a name=\"hpo-HP.580002191\"> </a></td><td>Progressive spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003390<a name=\"hpo-HP.580003390\"> </a></td><td>Sensory axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006986<a name=\"hpo-HP.580006986\"> </a></td><td>Upper limb spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002464<a name=\"hpo-HP.580002464\"> </a></td><td>Spastic dysarthria</td></tr><tr><td style=\"white-space:nowrap\">HP:0001308<a name=\"hpo-HP.580001308\"> </a></td><td>Tongue fasciculations</td></tr><tr><td style=\"white-space:nowrap\">HP:0007010<a name=\"hpo-HP.580007010\"> </a></td><td>Poor fine motor coordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0003737<a name=\"hpo-HP.580003737\"> </a></td><td>Mitochondrial myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0008012<a name=\"hpo-HP.580008012\"> </a></td><td>obsolete Congenital myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008872<a name=\"hpo-HP.580008872\"> </a></td><td>Feeding difficulties in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005750<a name=\"hpo-HP.580005750\"> </a></td><td>Contractures of the joints of the lower limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0009067<a name=\"hpo-HP.580009067\"> </a></td><td>Progressive spinal muscular atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001623<a name=\"hpo-HP.580001623\"> </a></td><td>Breech presentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001374<a name=\"hpo-HP.580001374\"> </a></td><td>Congenital hip dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002359<a name=\"hpo-HP.580002359\"> </a></td><td>Frequent falls</td></tr><tr><td style=\"white-space:nowrap\">HP:0003803<a name=\"hpo-HP.580003803\"> </a></td><td>Type 1 muscle fiber predominance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011410<a name=\"hpo-HP.580011410\"> </a></td><td>Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0008947<a name=\"hpo-HP.580008947\"> </a></td><td>Infantile muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100501<a name=\"hpo-HP.580100501\"> </a></td><td>Recurrent bronchiolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003789<a name=\"hpo-HP.580003789\"> </a></td><td>Minicore myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000544<a name=\"hpo-HP.580000544\"> </a></td><td>External ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001605<a name=\"hpo-HP.580001605\"> </a></td><td>Vocal cord paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003712<a name=\"hpo-HP.580003712\"> </a></td><td>Skeletal muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0012507<a name=\"hpo-HP.580012507\"> </a></td><td>Weakness of orbicularis oculi muscle</td></tr><tr><td style=\"white-space:nowrap\">HP:0009816<a name=\"hpo-HP.580009816\"> </a></td><td>Lower limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0008935<a name=\"hpo-HP.580008935\"> </a></td><td>Generalized neonatal hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003484<a name=\"hpo-HP.580003484\"> </a></td><td>Upper limb muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0008331<a name=\"hpo-HP.580008331\"> </a></td><td>Elevated creatine kinase after exercise</td></tr><tr><td style=\"white-space:nowrap\">HP:0001315<a name=\"hpo-HP.580001315\"> </a></td><td>Reduced tendon reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0012473<a name=\"hpo-HP.580012473\"> </a></td><td>Tongue atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003273<a name=\"hpo-HP.580003273\"> </a></td><td>Hip contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0006380<a name=\"hpo-HP.580006380\"> </a></td><td>Knee flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0003752<a name=\"hpo-HP.580003752\"> </a></td><td>Episodic flaccid weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0100298<a name=\"hpo-HP.580100298\"> </a></td><td>Motheaten muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0003693<a name=\"hpo-HP.580003693\"> </a></td><td>Distal amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002167<a name=\"hpo-HP.580002167\"> </a></td><td>Neurological speech impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0003388<a name=\"hpo-HP.580003388\"> </a></td><td>Easy fatigability</td></tr><tr><td style=\"white-space:nowrap\">HP:0001348<a name=\"hpo-HP.580001348\"> </a></td><td>Brisk reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0003445<a name=\"hpo-HP.580003445\"> </a></td><td>EMG: neuropathic changes</td></tr><tr><td style=\"white-space:nowrap\">HP:0009063<a name=\"hpo-HP.580009063\"> </a></td><td>Progressive distal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003720<a name=\"hpo-HP.580003720\"> </a></td><td>Generalized muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002493<a name=\"hpo-HP.580002493\"> </a></td><td>Upper motor neuron dysfunction</td></tr><tr><td style=\"white-space:nowrap\">HP:0012448<a name=\"hpo-HP.580012448\"> </a></td><td>Delayed myelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0001338<a name=\"hpo-HP.580001338\"> </a></td><td>Partial agenesis of the corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0006879<a name=\"hpo-HP.580006879\"> </a></td><td>Pontocerebellar atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0200101<a name=\"hpo-HP.580200101\"> </a></td><td>Decreased/absent ankle reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0009020<a name=\"hpo-HP.580009020\"> </a></td><td>Exercise-induced muscle fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002067<a name=\"hpo-HP.580002067\"> </a></td><td>Bradykinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012751<a name=\"hpo-HP.580012751\"> </a></td><td>Abnormal basal ganglia MRI signal intensity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003355<a name=\"hpo-HP.580003355\"> </a></td><td>Aminoaciduria</td></tr><tr><td style=\"white-space:nowrap\">HP:0012450<a name=\"hpo-HP.580012450\"> </a></td><td>Chronic constipation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011834<a name=\"hpo-HP.580011834\"> </a></td><td>Moyamoya phenomenon</td></tr><tr><td style=\"white-space:nowrap\">HP:0001297<a name=\"hpo-HP.580001297\"> </a></td><td>Stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0200049<a name=\"hpo-HP.580200049\"> </a></td><td>Upper limb hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008981<a name=\"hpo-HP.580008981\"> </a></td><td>Calf muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006785<a name=\"hpo-HP.580006785\"> </a></td><td>Limb-girdle muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006957<a name=\"hpo-HP.580006957\"> </a></td><td>Loss of ability to walk</td></tr><tr><td style=\"white-space:nowrap\">HP:0030098<a name=\"hpo-HP.580030098\"> </a></td><td>Reduced muscle dystrophin expression</td></tr><tr><td style=\"white-space:nowrap\">HP:0030115<a name=\"hpo-HP.580030115\"> </a></td><td>Reduced muscle fiber dysferlin</td></tr><tr><td style=\"white-space:nowrap\">HP:0002058<a name=\"hpo-HP.580002058\"> </a></td><td>Myopathic facies</td></tr><tr><td style=\"white-space:nowrap\">HP:0007858<a name=\"hpo-HP.580007858\"> </a></td><td>Chorioretinal lacunae</td></tr><tr><td style=\"white-space:nowrap\">HP:0006657<a name=\"hpo-HP.580006657\"> </a></td><td>Hypoplasia of first ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0007165<a name=\"hpo-HP.580007165\"> </a></td><td>Periventricular heterotopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0009779<a name=\"hpo-HP.580009779\"> </a></td><td>3-4 toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010665<a name=\"hpo-HP.580010665\"> </a></td><td>Bilateral coxa valga</td></tr><tr><td style=\"white-space:nowrap\">HP:0007598<a name=\"hpo-HP.580007598\"> </a></td><td>Bilateral single transverse palmar creases</td></tr><tr><td style=\"white-space:nowrap\">HP:0006101<a name=\"hpo-HP.580006101\"> </a></td><td>Finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010511<a name=\"hpo-HP.580010511\"> </a></td><td>Long toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002370<a name=\"hpo-HP.580002370\"> </a></td><td>Poor coordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0000480<a name=\"hpo-HP.580000480\"> </a></td><td>Retinal coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001770<a name=\"hpo-HP.580001770\"> </a></td><td>Toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010851<a name=\"hpo-HP.580010851\"> </a></td><td>EEG with burst suppression</td></tr><tr><td style=\"white-space:nowrap\">HP:0002791<a name=\"hpo-HP.580002791\"> </a></td><td>Hypoventilation</td></tr><tr><td style=\"white-space:nowrap\">HP:0040075<a name=\"hpo-HP.580040075\"> </a></td><td>Hypopituitarism</td></tr><tr><td style=\"white-space:nowrap\">HP:0012506<a name=\"hpo-HP.580012506\"> </a></td><td>Small pituitary gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000538<a name=\"hpo-HP.580000538\"> </a></td><td>Pseudopapilledema</td></tr><tr><td style=\"white-space:nowrap\">HP:0012717<a name=\"hpo-HP.580012717\"> </a></td><td>Severe conductive hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001370<a name=\"hpo-HP.580001370\"> </a></td><td>Rheumatoid arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000016<a name=\"hpo-HP.580000016\"> </a></td><td>Urinary retention</td></tr><tr><td style=\"white-space:nowrap\">HP:0012537<a name=\"hpo-HP.580012537\"> </a></td><td>Food intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011297<a name=\"hpo-HP.580011297\"> </a></td><td>Abnormal digit morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001273<a name=\"hpo-HP.580001273\"> </a></td><td>Abnormal corpus callosum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0030148<a name=\"hpo-HP.580030148\"> </a></td><td>Heart murmur</td></tr><tr><td style=\"white-space:nowrap\">HP:0045018<a name=\"hpo-HP.580045018\"> </a></td><td>Partial duplication of eyebrows</td></tr><tr><td style=\"white-space:nowrap\">HP:0008998<a name=\"hpo-HP.580008998\"> </a></td><td>Pectoralis hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001707<a name=\"hpo-HP.580001707\"> </a></td><td>Abnormal right ventricle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001540<a name=\"hpo-HP.580001540\"> </a></td><td>Diastasis recti</td></tr><tr><td style=\"white-space:nowrap\">HP:0100693<a name=\"hpo-HP.580100693\"> </a></td><td>Iridodonesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002265<a name=\"hpo-HP.580002265\"> </a></td><td>Large fleshy ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001132<a name=\"hpo-HP.580001132\"> </a></td><td>Lens subluxation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004927<a name=\"hpo-HP.580004927\"> </a></td><td>Pulmonary artery dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005619<a name=\"hpo-HP.580005619\"> </a></td><td>Thoracolumbar kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008619<a name=\"hpo-HP.580008619\"> </a></td><td>Bilateral sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001045<a name=\"hpo-HP.580001045\"> </a></td><td>Vitiligo</td></tr><tr><td style=\"white-space:nowrap\">HP:0009124<a name=\"hpo-HP.580009124\"> </a></td><td>Abnormal adipose tissue morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002979<a name=\"hpo-HP.580002979\"> </a></td><td>Bowing of the legs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000455<a name=\"hpo-HP.580000455\"> </a></td><td>Broad nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001007<a name=\"hpo-HP.580001007\"> </a></td><td>Hirsutism</td></tr><tr><td style=\"white-space:nowrap\">HP:0010314<a name=\"hpo-HP.580010314\"> </a></td><td>Premature thelarche</td></tr><tr><td style=\"white-space:nowrap\">HP:0000075<a name=\"hpo-HP.580000075\"> </a></td><td>Renal duplication</td></tr><tr><td style=\"white-space:nowrap\">HP:0000368<a name=\"hpo-HP.580000368\"> </a></td><td>Low-set, posteriorly rotated ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001052<a name=\"hpo-HP.580001052\"> </a></td><td>Nevus flammeus</td></tr><tr><td style=\"white-space:nowrap\">HP:0200048<a name=\"hpo-HP.580200048\"> </a></td><td>Cyanotic episode</td></tr><tr><td style=\"white-space:nowrap\">HP:0001902<a name=\"hpo-HP.580001902\"> </a></td><td>Giant platelets</td></tr><tr><td style=\"white-space:nowrap\">HP:0030043<a name=\"hpo-HP.580030043\"> </a></td><td>Hip subluxation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002938<a name=\"hpo-HP.580002938\"> </a></td><td>Lumbar hyperlordosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030084<a name=\"hpo-HP.580030084\"> </a></td><td>Clinodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005560<a name=\"hpo-HP.580005560\"> </a></td><td>Imbalanced hemoglobin synthesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001539<a name=\"hpo-HP.580001539\"> </a></td><td>Omphalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0009778<a name=\"hpo-HP.580009778\"> </a></td><td>Short thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002277<a name=\"hpo-HP.580002277\"> </a></td><td>Horner syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0011701<a name=\"hpo-HP.580011701\"> </a></td><td>Multifocal atrial tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005274<a name=\"hpo-HP.580005274\"> </a></td><td>Prominent nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001262<a name=\"hpo-HP.580001262\"> </a></td><td>Excessive daytime somnolence</td></tr><tr><td style=\"white-space:nowrap\">HP:0001285<a name=\"hpo-HP.580001285\"> </a></td><td>Spastic tetraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012171<a name=\"hpo-HP.580012171\"> </a></td><td>Stereotypical hand wringing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002518<a name=\"hpo-HP.580002518\"> </a></td><td>Abnormality of the periventricular white matter</td></tr><tr><td style=\"white-space:nowrap\">HP:0005692<a name=\"hpo-HP.580005692\"> </a></td><td>Joint hyperflexibility</td></tr><tr><td style=\"white-space:nowrap\">HP:0007440<a name=\"hpo-HP.580007440\"> </a></td><td>Generalized hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001805<a name=\"hpo-HP.580001805\"> </a></td><td>Onychogryposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011945<a name=\"hpo-HP.580011945\"> </a></td><td>Bronchiolitis obliterans organizing pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003763<a name=\"hpo-HP.580003763\"> </a></td><td>Bruxism</td></tr><tr><td style=\"white-space:nowrap\">HP:0010500<a name=\"hpo-HP.580010500\"> </a></td><td>Hyperextensibility of the knee</td></tr><tr><td style=\"white-space:nowrap\">HP:0040115<a name=\"hpo-HP.580040115\"> </a></td><td>Abnormality of the Eustachian tube</td></tr><tr><td style=\"white-space:nowrap\">HP:0008751<a name=\"hpo-HP.580008751\"> </a></td><td>Laryngeal cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0000403<a name=\"hpo-HP.580000403\"> </a></td><td>Recurrent otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0001787<a name=\"hpo-HP.580001787\"> </a></td><td>Abnormal delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0002571<a name=\"hpo-HP.580002571\"> </a></td><td>Achalasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002615<a name=\"hpo-HP.580002615\"> </a></td><td>Hypotension</td></tr><tr><td style=\"white-space:nowrap\">HP:0003550<a name=\"hpo-HP.580003550\"> </a></td><td>Predominantly lower limb lymphedema</td></tr><tr><td style=\"white-space:nowrap\">HP:0030363<a name=\"hpo-HP.580030363\"> </a></td><td>Primary Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0001727<a name=\"hpo-HP.580001727\"> </a></td><td>Thromboembolic stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0100603<a name=\"hpo-HP.580100603\"> </a></td><td>Toxemia of pregnancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0010836<a name=\"hpo-HP.580010836\"> </a></td><td>Abnormal circulating copper concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0000356<a name=\"hpo-HP.580000356\"> </a></td><td>Abnormality of the outer ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0002197<a name=\"hpo-HP.580002197\"> </a></td><td>Generalized-onset seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011436<a name=\"hpo-HP.580011436\"> </a></td><td>Abnormal maternal serum screening</td></tr><tr><td style=\"white-space:nowrap\">HP:0003517<a name=\"hpo-HP.580003517\"> </a></td><td>Birth length greater than 97th percentile</td></tr><tr><td style=\"white-space:nowrap\">HP:0003561<a name=\"hpo-HP.580003561\"> </a></td><td>Birth length less than 3rd percentile</td></tr><tr><td style=\"white-space:nowrap\">HP:0012188<a name=\"hpo-HP.580012188\"> </a></td><td>Hyperemesis gravidarum</td></tr><tr><td style=\"white-space:nowrap\">HP:0010519<a name=\"hpo-HP.580010519\"> </a></td><td>Increased fetal movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0030244<a name=\"hpo-HP.580030244\"> </a></td><td>Maternal fever in pregnancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0008071<a name=\"hpo-HP.580008071\"> </a></td><td>Maternal hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0100622<a name=\"hpo-HP.580100622\"> </a></td><td>Maternal seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011438<a name=\"hpo-HP.580011438\"> </a></td><td>Maternal teratogenic exposure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001998<a name=\"hpo-HP.580001998\"> </a></td><td>Neonatal hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0040187<a name=\"hpo-HP.580040187\"> </a></td><td>Neonatal sepsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002033<a name=\"hpo-HP.580002033\"> </a></td><td>Poor suck</td></tr><tr><td style=\"white-space:nowrap\">HP:0006579<a name=\"hpo-HP.580006579\"> </a></td><td>Prolonged neonatal jaundice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001724<a name=\"hpo-HP.580001724\"> </a></td><td>obsolete Aortic dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010621<a name=\"hpo-HP.580010621\"> </a></td><td>Cutaneous syndactyly of toes</td></tr><tr><td style=\"white-space:nowrap\">HP:0001880<a name=\"hpo-HP.580001880\"> </a></td><td>Eosinophilia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000162<a name=\"hpo-HP.580000162\"> </a></td><td>Glossoptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100578<a name=\"hpo-HP.580100578\"> </a></td><td>Lipoatrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002562<a name=\"hpo-HP.580002562\"> </a></td><td>Low-set nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0012893<a name=\"hpo-HP.580012893\"> </a></td><td>Neck muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001027<a name=\"hpo-HP.580001027\"> </a></td><td>Soft, doughy skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0100738<a name=\"hpo-HP.580100738\"> </a></td><td>Abnormal eating behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0007328<a name=\"hpo-HP.580007328\"> </a></td><td>Impaired pain sensation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002878<a name=\"hpo-HP.580002878\"> </a></td><td>Respiratory failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001776<a name=\"hpo-HP.580001776\"> </a></td><td>Bilateral talipes equinovarus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001360<a name=\"hpo-HP.580001360\"> </a></td><td>Holoprosencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001973<a name=\"hpo-HP.580001973\"> </a></td><td>Autoimmune thrombocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100749<a name=\"hpo-HP.580100749\"> </a></td><td>Chest pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0012531<a name=\"hpo-HP.580012531\"> </a></td><td>Pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0007585<a name=\"hpo-HP.580007585\"> </a></td><td>Skin fragility with non-scarring blistering</td></tr><tr><td style=\"white-space:nowrap\">HP:0002108<a name=\"hpo-HP.580002108\"> </a></td><td>Spontaneous pneumothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0006562<a name=\"hpo-HP.580006562\"> </a></td><td>Viral hepatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012647<a name=\"hpo-HP.580012647\"> </a></td><td>Abnormal inflammatory response</td></tr><tr><td style=\"white-space:nowrap\">HP:0012088<a name=\"hpo-HP.580012088\"> </a></td><td>Abnormal urinary odor</td></tr><tr><td style=\"white-space:nowrap\">HP:0011458<a name=\"hpo-HP.580011458\"> </a></td><td>Abdominal symptom</td></tr><tr><td style=\"white-space:nowrap\">HP:0002829<a name=\"hpo-HP.580002829\"> </a></td><td>Arthralgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010783<a name=\"hpo-HP.580010783\"> </a></td><td>Erythema</td></tr><tr><td style=\"white-space:nowrap\">HP:0010307<a name=\"hpo-HP.580010307\"> </a></td><td>Stridor</td></tr><tr><td style=\"white-space:nowrap\">HP:0001269<a name=\"hpo-HP.580001269\"> </a></td><td>Hemiparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006532<a name=\"hpo-HP.580006532\"> </a></td><td>Recurrent pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002580<a name=\"hpo-HP.580002580\"> </a></td><td>Volvulus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012387<a name=\"hpo-HP.580012387\"> </a></td><td>Bronchitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001266<a name=\"hpo-HP.580001266\"> </a></td><td>Choreoathetosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001531<a name=\"hpo-HP.580001531\"> </a></td><td>Failure to thrive in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011470<a name=\"hpo-HP.580011470\"> </a></td><td>Nasogastric tube feeding in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001361<a name=\"hpo-HP.580001361\"> </a></td><td>Nystagmus-induced head nodding</td></tr><tr><td style=\"white-space:nowrap\">HP:0001997<a name=\"hpo-HP.580001997\"> </a></td><td>Gout</td></tr><tr><td style=\"white-space:nowrap\">HP:0000965<a name=\"hpo-HP.580000965\"> </a></td><td>Cutis marmorata</td></tr><tr><td style=\"white-space:nowrap\">HP:0010316<a name=\"hpo-HP.580010316\"> </a></td><td>Ebstein anomaly of the tricuspid valve</td></tr><tr><td style=\"white-space:nowrap\">HP:0010543<a name=\"hpo-HP.580010543\"> </a></td><td>Opsoclonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0007704<a name=\"hpo-HP.580007704\"> </a></td><td>Paroxysmal involuntary eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0030364<a name=\"hpo-HP.580030364\"> </a></td><td>Secondary Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0007738<a name=\"hpo-HP.580007738\"> </a></td><td>Uncontrolled eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0030366<a name=\"hpo-HP.580030366\"> </a></td><td>Delivery by Odon device</td></tr><tr><td style=\"white-space:nowrap\">HP:0011411<a name=\"hpo-HP.580011411\"> </a></td><td>Forceps delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0030369<a name=\"hpo-HP.580030369\"> </a></td><td>Induced vaginal delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0005268<a name=\"hpo-HP.580005268\"> </a></td><td>Spontaneous abortion</td></tr><tr><td style=\"white-space:nowrap\">HP:0030365<a name=\"hpo-HP.580030365\"> </a></td><td>Vaginal birth after Caesarian</td></tr><tr><td style=\"white-space:nowrap\">HP:0011412<a name=\"hpo-HP.580011412\"> </a></td><td>Ventouse delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0002572<a name=\"hpo-HP.580002572\"> </a></td><td>Episodic vomiting</td></tr><tr><td style=\"white-space:nowrap\">HP:0030350<a name=\"hpo-HP.580030350\"> </a></td><td>Erythematous papule</td></tr><tr><td style=\"white-space:nowrap\">HP:0001386<a name=\"hpo-HP.580001386\"> </a></td><td>Joint swelling</td></tr><tr><td style=\"white-space:nowrap\">HP:0000147<a name=\"hpo-HP.580000147\"> </a></td><td>Polycystic ovaries</td></tr><tr><td style=\"white-space:nowrap\">HP:0012412<a name=\"hpo-HP.580012412\"> </a></td><td>Premature adrenarche</td></tr><tr><td style=\"white-space:nowrap\">HP:0004411<a name=\"hpo-HP.580004411\"> </a></td><td>Deviated nasal septum</td></tr><tr><td style=\"white-space:nowrap\">HP:0040183<a name=\"hpo-HP.580040183\"> </a></td><td>Encopresis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100507<a name=\"hpo-HP.580100507\"> </a></td><td>Reduced blood folate concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0007011<a name=\"hpo-HP.580007011\"> </a></td><td>Fourth cranial nerve palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000375<a name=\"hpo-HP.580000375\"> </a></td><td>Abnormal cochlea morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009911<a name=\"hpo-HP.580009911\"> </a></td><td>Abnormal temporal bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000081<a name=\"hpo-HP.580000081\"> </a></td><td>Duplicated collecting system</td></tr><tr><td style=\"white-space:nowrap\">HP:0006894<a name=\"hpo-HP.580006894\"> </a></td><td>Hypoplastic olfactory lobes</td></tr><tr><td style=\"white-space:nowrap\">HP:0011380<a name=\"hpo-HP.580011380\"> </a></td><td>Morphological abnormality of the semicircular canal</td></tr><tr><td style=\"white-space:nowrap\">HP:0000110<a name=\"hpo-HP.580000110\"> </a></td><td>Renal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030025<a name=\"hpo-HP.580030025\"> </a></td><td>Auricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0010044<a name=\"hpo-HP.580010044\"> </a></td><td>Short 4th metacarpal</td></tr><tr><td style=\"white-space:nowrap\">HP:0010047<a name=\"hpo-HP.580010047\"> </a></td><td>Short 5th metacarpal</td></tr><tr><td style=\"white-space:nowrap\">HP:0000201<a name=\"hpo-HP.580000201\"> </a></td><td>Pierre-Robin sequence</td></tr><tr><td style=\"white-space:nowrap\">HP:0100837<a name=\"hpo-HP.580100837\"> </a></td><td>Atrophodermia vermiculata</td></tr><tr><td style=\"white-space:nowrap\">HP:0002673<a name=\"hpo-HP.580002673\"> </a></td><td>Coxa valga</td></tr><tr><td style=\"white-space:nowrap\">HP:0001476<a name=\"hpo-HP.580001476\"> </a></td><td>Delayed closure of the anterior fontanelle</td></tr><tr><td style=\"white-space:nowrap\">HP:0011069<a name=\"hpo-HP.580011069\"> </a></td><td>Increased number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009879<a name=\"hpo-HP.580009879\"> </a></td><td>Simplified gyral pattern</td></tr><tr><td style=\"white-space:nowrap\">HP:0006315<a name=\"hpo-HP.580006315\"> </a></td><td>Single median maxillary incisor</td></tr><tr><td style=\"white-space:nowrap\">HP:0001194<a name=\"hpo-HP.580001194\"> </a></td><td>Abnormalities of placenta or umbilical cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0100767<a name=\"hpo-HP.580100767\"> </a></td><td>Abnormal placenta morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0006543<a name=\"hpo-HP.580006543\"> </a></td><td>Cardiorespiratory arrest</td></tr><tr><td style=\"white-space:nowrap\">HP:0003074<a name=\"hpo-HP.580003074\"> </a></td><td>Hyperglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000842<a name=\"hpo-HP.580000842\"> </a></td><td>Hyperinsulinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011951<a name=\"hpo-HP.580011951\"> </a></td><td>Aspiration pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006528<a name=\"hpo-HP.580006528\"> </a></td><td>Chronic lung disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0002383<a name=\"hpo-HP.580002383\"> </a></td><td>Encephalitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000388<a name=\"hpo-HP.580000388\"> </a></td><td>Otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0002530<a name=\"hpo-HP.580002530\"> </a></td><td>Axial dystonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002780<a name=\"hpo-HP.580002780\"> </a></td><td>Bronchomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008755<a name=\"hpo-HP.580008755\"> </a></td><td>Laryngotracheomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000308<a name=\"hpo-HP.580000308\"> </a></td><td>Microretrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002786<a name=\"hpo-HP.580002786\"> </a></td><td>Tracheobronchomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012389<a name=\"hpo-HP.580012389\"> </a></td><td>Appendicular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011323<a name=\"hpo-HP.580011323\"> </a></td><td>Cleft of chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000417<a name=\"hpo-HP.580000417\"> </a></td><td>Slender nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0001863<a name=\"hpo-HP.580001863\"> </a></td><td>Toe clinodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0008386<a name=\"hpo-HP.580008386\"> </a></td><td>Aplasia/Hypoplasia of the nails</td></tr><tr><td style=\"white-space:nowrap\">HP:0006989<a name=\"hpo-HP.580006989\"> </a></td><td>Dysplastic corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0100954<a name=\"hpo-HP.580100954\"> </a></td><td>Open operculum</td></tr><tr><td style=\"white-space:nowrap\">HP:0004482<a name=\"hpo-HP.580004482\"> </a></td><td>Relative macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:3000033<a name=\"hpo-HP.583000033\"> </a></td><td>Abnormal nasopharyngeal adenoid morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009062<a name=\"hpo-HP.580009062\"> </a></td><td>Infantile axial hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002189<a name=\"hpo-HP.580002189\"> </a></td><td>obsolete Excessive daytime sleepiness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002141<a name=\"hpo-HP.580002141\"> </a></td><td>Gait imbalance</td></tr><tr><td style=\"white-space:nowrap\">HP:0012734<a name=\"hpo-HP.580012734\"> </a></td><td>Ketotic hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005968<a name=\"hpo-HP.580005968\"> </a></td><td>Temperature instability</td></tr><tr><td style=\"white-space:nowrap\">HP:0012538<a name=\"hpo-HP.580012538\"> </a></td><td>Gluten intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0000979<a name=\"hpo-HP.580000979\"> </a></td><td>Purpura</td></tr><tr><td style=\"white-space:nowrap\">HP:0001988<a name=\"hpo-HP.580001988\"> </a></td><td>Recurrent hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001488<a name=\"hpo-HP.580001488\"> </a></td><td>Bilateral ptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011229<a name=\"hpo-HP.580011229\"> </a></td><td>Broad eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0004440<a name=\"hpo-HP.580004440\"> </a></td><td>Coronal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004453<a name=\"hpo-HP.580004453\"> </a></td><td>Overfolding of the superior helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0012547<a name=\"hpo-HP.580012547\"> </a></td><td>Abnormal involuntary eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0100814<a name=\"hpo-HP.580100814\"> </a></td><td>Blue nevus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010751<a name=\"hpo-HP.580010751\"> </a></td><td>Dimple chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0007087<a name=\"hpo-HP.580007087\"> </a></td><td>obsolete Involuntary jerking movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0012498<a name=\"hpo-HP.580012498\"> </a></td><td>Nuchal cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0002472<a name=\"hpo-HP.580002472\"> </a></td><td>Small cerebral cortex</td></tr><tr><td style=\"white-space:nowrap\">HP:0100307<a name=\"hpo-HP.580100307\"> </a></td><td>Cerebellar hemisphere hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002151<a name=\"hpo-HP.580002151\"> </a></td><td>Increased serum lactate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001698<a name=\"hpo-HP.580001698\"> </a></td><td>Pericardial effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0006903<a name=\"hpo-HP.580006903\"> </a></td><td>Congenital peripheral neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006895<a name=\"hpo-HP.580006895\"> </a></td><td>Lower limb hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002744<a name=\"hpo-HP.580002744\"> </a></td><td>Bilateral cleft lip and palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0010664<a name=\"hpo-HP.580010664\"> </a></td><td>Fusion of the left and right thalami</td></tr><tr><td style=\"white-space:nowrap\">HP:0000327<a name=\"hpo-HP.580000327\"> </a></td><td>Hypoplasia of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0000474<a name=\"hpo-HP.580000474\"> </a></td><td>Thickened nuchal skin fold</td></tr><tr><td style=\"white-space:nowrap\">HP:0000105<a name=\"hpo-HP.580000105\"> </a></td><td>Enlarged kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0000113<a name=\"hpo-HP.580000113\"> </a></td><td>Polycystic kidney dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000104<a name=\"hpo-HP.580000104\"> </a></td><td>Renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001362<a name=\"hpo-HP.580001362\"> </a></td><td>Calvarial skull defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0008245<a name=\"hpo-HP.580008245\"> </a></td><td>Pituitary hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001552<a name=\"hpo-HP.580001552\"> </a></td><td>Barrel-shaped chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0006297<a name=\"hpo-HP.580006297\"> </a></td><td>Hypoplasia of dental enamel</td></tr><tr><td style=\"white-space:nowrap\">HP:0100023<a name=\"hpo-HP.580100023\"> </a></td><td>Recurrent hand flapping</td></tr><tr><td style=\"white-space:nowrap\">HP:0005518<a name=\"hpo-HP.580005518\"> </a></td><td>Increased mean corpuscular volume</td></tr><tr><td style=\"white-space:nowrap\">HP:0012418<a name=\"hpo-HP.580012418\"> </a></td><td>Hypoxemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100259<a name=\"hpo-HP.580100259\"> </a></td><td>Postaxial polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010814<a name=\"hpo-HP.580010814\"> </a></td><td>Abnormal position of hair whorl</td></tr><tr><td style=\"white-space:nowrap\">HP:0003764<a name=\"hpo-HP.580003764\"> </a></td><td>Nevus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000445<a name=\"hpo-HP.580000445\"> </a></td><td>Wide nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0010677<a name=\"hpo-HP.580010677\"> </a></td><td>Enuresis nocturna</td></tr><tr><td style=\"white-space:nowrap\">HP:0001510<a name=\"hpo-HP.580001510\"> </a></td><td>Growth delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0012428<a name=\"hpo-HP.580012428\"> </a></td><td>Prominent calcaneus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012471<a name=\"hpo-HP.580012471\"> </a></td><td>Thick vermilion border</td></tr><tr><td style=\"white-space:nowrap\">HP:0007110<a name=\"hpo-HP.580007110\"> </a></td><td>Central hypoventilation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010614<a name=\"hpo-HP.580010614\"> </a></td><td>Fibroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001034<a name=\"hpo-HP.580001034\"> </a></td><td>Hypermelanotic macule</td></tr><tr><td style=\"white-space:nowrap\">HP:0011365<a name=\"hpo-HP.580011365\"> </a></td><td>Patchy hypopigmentation of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0001920<a name=\"hpo-HP.580001920\"> </a></td><td>Renal artery stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002828<a name=\"hpo-HP.580002828\"> </a></td><td>Multiple joint contractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0002144<a name=\"hpo-HP.580002144\"> </a></td><td>Tethered cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0010964<a name=\"hpo-HP.580010964\"> </a></td><td>Abnormal circulating long-chain fatty-acid concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0010536<a name=\"hpo-HP.580010536\"> </a></td><td>Central sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0011262<a name=\"hpo-HP.580011262\"> </a></td><td>Crimped helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0040079<a name=\"hpo-HP.580040079\"> </a></td><td>Irregular dentition</td></tr><tr><td style=\"white-space:nowrap\">HP:0011481<a name=\"hpo-HP.580011481\"> </a></td><td>Abnormal lacrimal duct morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000220<a name=\"hpo-HP.580000220\"> </a></td><td>Velopharyngeal insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002153<a name=\"hpo-HP.580002153\"> </a></td><td>Hyperkalemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002148<a name=\"hpo-HP.580002148\"> </a></td><td>Hypophosphatemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012621<a name=\"hpo-HP.580012621\"> </a></td><td>Persistent cloaca</td></tr><tr><td style=\"white-space:nowrap\">HP:0000867<a name=\"hpo-HP.580000867\"> </a></td><td>Secondary hyperparathyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0003762<a name=\"hpo-HP.580003762\"> </a></td><td>Uterus didelphys</td></tr><tr><td style=\"white-space:nowrap\">HP:0100512<a name=\"hpo-HP.580100512\"> </a></td><td>Low levels of vitamin D</td></tr><tr><td style=\"white-space:nowrap\">HP:0012156<a name=\"hpo-HP.580012156\"> </a></td><td>Hemophagocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008209<a name=\"hpo-HP.580008209\"> </a></td><td>Premature ovarian insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0004349<a name=\"hpo-HP.580004349\"> </a></td><td>Reduced bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0001924<a name=\"hpo-HP.580001924\"> </a></td><td>Sideroblastic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011703<a name=\"hpo-HP.580011703\"> </a></td><td>Sinus tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010609<a name=\"hpo-HP.580010609\"> </a></td><td>Skin tags</td></tr><tr><td style=\"white-space:nowrap\">HP:0002725<a name=\"hpo-HP.580002725\"> </a></td><td>Systemic lupus erythematosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0003193<a name=\"hpo-HP.580003193\"> </a></td><td>Allergic rhinitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006896<a name=\"hpo-HP.580006896\"> </a></td><td>Hypnopompic hallucinations</td></tr><tr><td style=\"white-space:nowrap\">HP:0002524<a name=\"hpo-HP.580002524\"> </a></td><td>Cataplexy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005227<a name=\"hpo-HP.580005227\"> </a></td><td>Adenomatous colonic polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012173<a name=\"hpo-HP.580012173\"> </a></td><td>Orthostatic tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001271<a name=\"hpo-HP.580001271\"> </a></td><td>Polyneuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0009120<a name=\"hpo-HP.580009120\"> </a></td><td>Aplasia/Hypoplasia involving the sinuses</td></tr><tr><td style=\"white-space:nowrap\">HP:0000625<a name=\"hpo-HP.580000625\"> </a></td><td>Eyelid coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0009754<a name=\"hpo-HP.580009754\"> </a></td><td>Fibrous syngnathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012478<a name=\"hpo-HP.580012478\"> </a></td><td>Temporomandibular joint ankylosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001233<a name=\"hpo-HP.580001233\"> </a></td><td>2-3 finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000811<a name=\"hpo-HP.580000811\"> </a></td><td>Abnormal external genitalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005120<a name=\"hpo-HP.580005120\"> </a></td><td>Abnormal cardiac atrium morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008388<a name=\"hpo-HP.580008388\"> </a></td><td>Abnormal toenail morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011467<a name=\"hpo-HP.580011467\"> </a></td><td>Absent gallbladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0010760<a name=\"hpo-HP.580010760\"> </a></td><td>Absent toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001545<a name=\"hpo-HP.580001545\"> </a></td><td>Anteriorly placed anus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001640<a name=\"hpo-HP.580001640\"> </a></td><td>Cardiomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002990<a name=\"hpo-HP.580002990\"> </a></td><td>Fibular aplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004443<a name=\"hpo-HP.580004443\"> </a></td><td>Lambdoidal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008569<a name=\"hpo-HP.580008569\"> </a></td><td>Microtia, second degree</td></tr><tr><td style=\"white-space:nowrap\">HP:0006277<a name=\"hpo-HP.580006277\"> </a></td><td>Pancreatic hyperplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010445<a name=\"hpo-HP.580010445\"> </a></td><td>Primum atrial septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0011640<a name=\"hpo-HP.580011640\"> </a></td><td>Single coronary artery origin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011608<a name=\"hpo-HP.580011608\"> </a></td><td>Type II truncus arteriosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0011327<a name=\"hpo-HP.580011327\"> </a></td><td>Posterior plagiocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0007655<a name=\"hpo-HP.580007655\"> </a></td><td>Eversion of lateral third of lower eyelids</td></tr><tr><td style=\"white-space:nowrap\">HP:0010747<a name=\"hpo-HP.580010747\"> </a></td><td>Medial flaring of the eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0005957<a name=\"hpo-HP.580005957\"> </a></td><td>Breathing dysregulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000992<a name=\"hpo-HP.580000992\"> </a></td><td>Cutaneous photosensitivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0011995<a name=\"hpo-HP.580011995\"> </a></td><td>Atrial septal dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000377<a name=\"hpo-HP.580000377\"> </a></td><td>Abnormality of the pinna</td></tr><tr><td style=\"white-space:nowrap\">HP:0011266<a name=\"hpo-HP.580011266\"> </a></td><td>Microtia, first degree</td></tr><tr><td style=\"white-space:nowrap\">HP:0012650<a name=\"hpo-HP.580012650\"> </a></td><td>Perisylvian polymicrogyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0004970<a name=\"hpo-HP.580004970\"> </a></td><td>Ascending tubular aorta aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0008348<a name=\"hpo-HP.580008348\"> </a></td><td>Decreased circulating IgG2 level</td></tr><tr><td style=\"white-space:nowrap\">HP:0012115<a name=\"hpo-HP.580012115\"> </a></td><td>Hepatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006979<a name=\"hpo-HP.580006979\"> </a></td><td>Sleep-wake cycle disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0008587<a name=\"hpo-HP.580008587\"> </a></td><td>Mild neurosensory hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0006097<a name=\"hpo-HP.580006097\"> </a></td><td>3-4 finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005263<a name=\"hpo-HP.580005263\"> </a></td><td>Gastritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0200043<a name=\"hpo-HP.580200043\"> </a></td><td>Verrucae</td></tr><tr><td style=\"white-space:nowrap\">HP:0009600<a name=\"hpo-HP.580009600\"> </a></td><td>Flexion contracture of thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0010818<a name=\"hpo-HP.580010818\"> </a></td><td>Generalized tonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0002599<a name=\"hpo-HP.580002599\"> </a></td><td>Head titubation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002090<a name=\"hpo-HP.580002090\"> </a></td><td>Pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030423<a name=\"hpo-HP.580030423\"> </a></td><td>Splenic cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0030187<a name=\"hpo-HP.580030187\"> </a></td><td>Titubation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002375<a name=\"hpo-HP.580002375\"> </a></td><td>Hypokinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007166<a name=\"hpo-HP.580007166\"> </a></td><td>Paroxysmal dyskinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003077<a name=\"hpo-HP.580003077\"> </a></td><td>Hyperlipidemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000017<a name=\"hpo-HP.580000017\"> </a></td><td>Nocturia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100555<a name=\"hpo-HP.580100555\"> </a></td><td>Asymmetric growth</td></tr><tr><td style=\"white-space:nowrap\">HP:0011847<a name=\"hpo-HP.580011847\"> </a></td><td>Giant cell tumor of bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0000112<a name=\"hpo-HP.580000112\"> </a></td><td>Nephropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000246<a name=\"hpo-HP.580000246\"> </a></td><td>Sinusitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001012<a name=\"hpo-HP.580001012\"> </a></td><td>Multiple lipomas</td></tr><tr><td style=\"white-space:nowrap\">HP:0000851<a name=\"hpo-HP.580000851\"> </a></td><td>Congenital hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0002345<a name=\"hpo-HP.580002345\"> </a></td><td>Action tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002677<a name=\"hpo-HP.580002677\"> </a></td><td>Small foramen magnum</td></tr><tr><td style=\"white-space:nowrap\">HP:0011947<a name=\"hpo-HP.580011947\"> </a></td><td>Respiratory tract infection</td></tr><tr><td style=\"white-space:nowrap\">HP:0012151<a name=\"hpo-HP.580012151\"> </a></td><td>Hemothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0005988<a name=\"hpo-HP.580005988\"> </a></td><td>Congenital muscular torticollis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002329<a name=\"hpo-HP.580002329\"> </a></td><td>Drowsiness</td></tr><tr><td style=\"white-space:nowrap\">HP:0012395<a name=\"hpo-HP.580012395\"> </a></td><td>Seasonal allergy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011679<a name=\"hpo-HP.580011679\"> </a></td><td>Tetralogy of Fallot with pulmonary stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001864<a name=\"hpo-HP.580001864\"> </a></td><td>Clinodactyly of the 5th toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0006934<a name=\"hpo-HP.580006934\"> </a></td><td>Congenital nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0100355<a name=\"hpo-HP.580100355\"> </a></td><td>Contractures of the distal interphalangeal joint of the 5th toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0007894<a name=\"hpo-HP.580007894\"> </a></td><td>Hypopigmentation of the fundus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012377<a name=\"hpo-HP.580012377\"> </a></td><td>Hemianopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002354<a name=\"hpo-HP.580002354\"> </a></td><td>Memory impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000872<a name=\"hpo-HP.580000872\"> </a></td><td>Hashimoto thyroiditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002519<a name=\"hpo-HP.580002519\"> </a></td><td>Hypnagogic hallucinations</td></tr><tr><td style=\"white-space:nowrap\">HP:0010647<a name=\"hpo-HP.580010647\"> </a></td><td>Abnormal elasticity of skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0002592<a name=\"hpo-HP.580002592\"> </a></td><td>Gastric ulcer</td></tr><tr><td style=\"white-space:nowrap\">HP:0004938<a name=\"hpo-HP.580004938\"> </a></td><td>Tortuous cerebral arteries</td></tr><tr><td style=\"white-space:nowrap\">HP:0004948<a name=\"hpo-HP.580004948\"> </a></td><td>Vascular tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002516<a name=\"hpo-HP.580002516\"> </a></td><td>Increased intracranial pressure</td></tr><tr><td style=\"white-space:nowrap\">HP:0006460<a name=\"hpo-HP.580006460\"> </a></td><td>Increased laxity of ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0002317<a name=\"hpo-HP.580002317\"> </a></td><td>Unsteady gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0000182<a name=\"hpo-HP.580000182\"> </a></td><td>Movement abnormality of the tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0009887<a name=\"hpo-HP.580009887\"> </a></td><td>Abnormality of hair pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005824<a name=\"hpo-HP.580005824\"> </a></td><td>Clinodactyly of the 2nd toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002212<a name=\"hpo-HP.580002212\"> </a></td><td>Curly hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0009803<a name=\"hpo-HP.580009803\"> </a></td><td>Short phalanx of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0000572<a name=\"hpo-HP.580000572\"> </a></td><td>Visual loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0005216<a name=\"hpo-HP.580005216\"> </a></td><td>Impaired mastication</td></tr><tr><td style=\"white-space:nowrap\">HP:0000619<a name=\"hpo-HP.580000619\"> </a></td><td>Impaired convergence</td></tr><tr><td style=\"white-space:nowrap\">HP:0002403<a name=\"hpo-HP.580002403\"> </a></td><td>Positive Romberg sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0008744<a name=\"hpo-HP.580008744\"> </a></td><td>Abnormal aryepiglottic fold morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002374<a name=\"hpo-HP.580002374\"> </a></td><td>Diminished movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0008277<a name=\"hpo-HP.580008277\"> </a></td><td>Abnormal blood zinc concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0012781<a name=\"hpo-HP.580012781\"> </a></td><td>Mid-frequency hearing loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0100758<a name=\"hpo-HP.580100758\"> </a></td><td>Gangrene</td></tr><tr><td style=\"white-space:nowrap\">HP:0003256<a name=\"hpo-HP.580003256\"> </a></td><td>Abnormality of the coagulation cascade</td></tr><tr><td style=\"white-space:nowrap\">HP:0004387<a name=\"hpo-HP.580004387\"> </a></td><td>Enterocolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011029<a name=\"hpo-HP.580011029\"> </a></td><td>Internal hemorrhage</td></tr><tr><td style=\"white-space:nowrap\">HP:0011649<a name=\"hpo-HP.580011649\"> </a></td><td>Patent ductus arteriosus after premature birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0012050<a name=\"hpo-HP.580012050\"> </a></td><td>Anasarca</td></tr><tr><td style=\"white-space:nowrap\">HP:0001683<a name=\"hpo-HP.580001683\"> </a></td><td>Ectopia cordis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011682<a name=\"hpo-HP.580011682\"> </a></td><td>Perimembranous ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0010624<a name=\"hpo-HP.580010624\"> </a></td><td>Aplastic/hypoplastic toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002705<a name=\"hpo-HP.580002705\"> </a></td><td>High, narrow palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0011340<a name=\"hpo-HP.580011340\"> </a></td><td>Incomplete cleft of the upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0011613<a name=\"hpo-HP.580011613\"> </a></td><td>Interrupted aortic arch type B</td></tr><tr><td style=\"white-space:nowrap\">HP:0006167<a name=\"hpo-HP.580006167\"> </a></td><td>Prominent proximal interphalangeal joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0002918<a name=\"hpo-HP.580002918\"> </a></td><td>Hypermagnesemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011937<a name=\"hpo-HP.580011937\"> </a></td><td>Hypoplastic fifth toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0001067<a name=\"hpo-HP.580001067\"> </a></td><td>Neurofibromas</td></tr><tr><td style=\"white-space:nowrap\">HP:0011403<a name=\"hpo-HP.580011403\"> </a></td><td>Abnormal umbilical cord blood vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0003316<a name=\"hpo-HP.580003316\"> </a></td><td>Butterfly vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0002247<a name=\"hpo-HP.580002247\"> </a></td><td>Duodenal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008439<a name=\"hpo-HP.580008439\"> </a></td><td>Lumbar hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0011599<a name=\"hpo-HP.580011599\"> </a></td><td>Mesocardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008467<a name=\"hpo-HP.580008467\"> </a></td><td>Thoracic hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0004626<a name=\"hpo-HP.580004626\"> </a></td><td>Lumbar scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006808<a name=\"hpo-HP.580006808\"> </a></td><td>Cerebral hypomyelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0002926<a name=\"hpo-HP.580002926\"> </a></td><td>Abnormality of thyroid physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0007970<a name=\"hpo-HP.580007970\"> </a></td><td>Congenital ptosis</td></tr></table></div>" - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://purl.obolibrary.org/obo/hp.owl"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "HPO"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Human Phenotype Ontology"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">fhir:CodeSystem.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://purl.obolibrary.org/obo/hp.owl"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "HPO"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Human Phenotype Ontology"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">fhir:CodeSystem.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">fhir:CodeSystem.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -322,17 +322,17 @@ <h2 id="root">: Human Phenotype Ontology - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "The Human Phenotype Ontology (HPO) provides a standardized vocabulary of phenotypic abnormalities encountered in human disease. Please see license of HPO at http://www.human-phenotype-ontology.org"]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "The Human Phenotype Ontology (HPO) provides a standardized vocabulary of phenotypic abnormalities encountered in human disease. Please see license of HPO at http://www.human-phenotype-ontology.org"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.valueSet">fhir:CodeSystem.valueSet</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://fhir.ncpi-project-forge.io/ValueSet/phenotype-codes"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://fhir.ncpi-project-forge.io/ValueSet/phenotype-codes> - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.hierarchyMeaning">fhir:CodeSystem.hierarchyMeaning</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "is-a"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.compositional">fhir:CodeSystem.compositional</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.versionNeeded">fhir:CodeSystem.versionNeeded</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "fragment"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.count">fhir:CodeSystem.count</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "1880"^^xsd:nonNegativeInteger]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.hierarchyMeaning">fhir:CodeSystem.hierarchyMeaning</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "is-a"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.compositional">fhir:CodeSystem.compositional</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.versionNeeded">fhir:CodeSystem.versionNeeded</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "fragment"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.count">fhir:CodeSystem.count</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "1880"^^xsd:nonNegativeInteger]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.filter">fhir:CodeSystem.filter</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.filter.code">fhir:CodeSystem.filter.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "root" ]; @@ -354,7 +354,7 @@ <h2 id="root">: Human Phenotype Ontology - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "="; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0 ]; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.filter.value">fhir:CodeSystem.filter.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "True or false" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.property">fhir:CodeSystem.property</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.property.code">fhir:CodeSystem.property.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "parent" ]; @@ -375,7 +375,7 @@ <h2 id="root">: Human Phenotype Ontology - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.property.code">fhir:CodeSystem.property.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "deprecated" ]; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.property.description">fhir:CodeSystem.property.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Indicates if this concept is deprecated." ]; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.property.type">fhir:CodeSystem.property.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "boolean" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept">fhir:CodeSystem.concept</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "HP:0000365" ]; @@ -7896,7 +7896,7 @@ <h2 id="root">: Human Phenotype Ontology - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1879; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "HP:0007970" ]; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.display">fhir:CodeSystem.concept.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Congenital ptosis" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -7934,7 +7934,7 @@ <h2 id="root">: Human Phenotype Ontology - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-hpo.xlsx b/CodeSystem-hpo.xlsx index e3ba9541..b9605f18 100644 Binary files a/CodeSystem-hpo.xlsx and b/CodeSystem-hpo.xlsx differ diff --git a/CodeSystem-hpo.xml b/CodeSystem-hpo.xml index 735a6976..1de45f4e 100644 --- a/CodeSystem-hpo.xml +++ b/CodeSystem-hpo.xml @@ -11,7 +11,7 @@ <title value="Human Phenotype Ontology"/> <status value="draft"/> <experimental value="false"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/CodeSystem-hpo.xml.html b/CodeSystem-hpo.xml.html index a6c91054..ba70163a 100644 --- a/CodeSystem-hpo.xml.html +++ b/CodeSystem-hpo.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Human Phenotype Ontology - XML Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: Human Phenotype Ontology - XML Representation</h2> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Human Phenotype Ontology"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">experimental</a> <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">value</a>="false"/> - <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -7916,7 +7916,7 @@ <h2 id="root">: Human Phenotype Ontology - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-loinc-answers-testing.html b/CodeSystem-loinc-answers-testing.html index 4dd49076..1573b18b 100644 --- a/CodeSystem-loinc-answers-testing.html +++ b/CodeSystem-loinc-answers-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">CodeSystem: LOINC Answers - Testing Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">CodeSystem: LOINC Answers - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-loinc-answers.change.history.html b/CodeSystem-loinc-answers.change.history.html index 6809e902..e82b48bf 100644 --- a/CodeSystem-loinc-answers.change.history.html +++ b/CodeSystem-loinc-answers.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: LoincAnswers - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-loinc-answers.html b/CodeSystem-loinc-answers.html index 2928295c..f152123b 100644 --- a/CodeSystem-loinc-answers.html +++ b/CodeSystem-loinc-answers.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -281,7 +281,7 @@ <h2 id="root">CodeSystem: LOINC Answers Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -349,7 +349,7 @@ <h2 id="root">CodeSystem: LOINC Answers <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-loinc-answers.json b/CodeSystem-loinc-answers.json index 0a654be9..2b30d8bb 100644 --- a/CodeSystem-loinc-answers.json +++ b/CodeSystem-loinc-answers.json @@ -1,139 +1,131 @@ -{ - "resourceType": "CodeSystem", - "id": "loinc-answers", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>ncpi:loinc-answers</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">LA21254-0<a name=\"loinc-answers-LA21254-0\"> </a></td><td>Chromosome 1</td></tr><tr><td style=\"white-space:nowrap\">LA21255-7<a name=\"loinc-answers-LA21255-7\"> </a></td><td>Chromosome 2</td></tr><tr><td style=\"white-space:nowrap\">LA21256-5<a name=\"loinc-answers-LA21256-5\"> </a></td><td>Chromosome 3</td></tr><tr><td style=\"white-space:nowrap\">LA21257-3<a name=\"loinc-answers-LA21257-3\"> </a></td><td>Chromosome 4</td></tr><tr><td style=\"white-space:nowrap\">LA21258-1<a name=\"loinc-answers-LA21258-1\"> </a></td><td>Chromosome 5</td></tr><tr><td style=\"white-space:nowrap\">LA21259-9<a name=\"loinc-answers-LA21259-9\"> </a></td><td>Chromosome 6</td></tr><tr><td style=\"white-space:nowrap\">LA21260-7<a name=\"loinc-answers-LA21260-7\"> </a></td><td>Chromosome 7</td></tr><tr><td style=\"white-space:nowrap\">LA21261-5<a name=\"loinc-answers-LA21261-5\"> </a></td><td>Chromosome 8</td></tr><tr><td style=\"white-space:nowrap\">LA21262-3<a name=\"loinc-answers-LA21262-3\"> </a></td><td>Chromosome 9</td></tr><tr><td style=\"white-space:nowrap\">LA21263-1<a name=\"loinc-answers-LA21263-1\"> </a></td><td>Chromosome 10</td></tr><tr><td style=\"white-space:nowrap\">LA21264-9<a name=\"loinc-answers-LA21264-9\"> </a></td><td>Chromosome 11</td></tr><tr><td style=\"white-space:nowrap\">LA21265-6<a name=\"loinc-answers-LA21265-6\"> </a></td><td>Chromosome 12</td></tr><tr><td style=\"white-space:nowrap\">LA21266-4<a name=\"loinc-answers-LA21266-4\"> </a></td><td>Chromosome 13</td></tr><tr><td style=\"white-space:nowrap\">LA21267-2<a name=\"loinc-answers-LA21267-2\"> </a></td><td>Chromosome 14</td></tr><tr><td style=\"white-space:nowrap\">LA21268-0<a name=\"loinc-answers-LA21268-0\"> </a></td><td>Chromosome 15</td></tr><tr><td style=\"white-space:nowrap\">LA21269-8<a name=\"loinc-answers-LA21269-8\"> </a></td><td>Chromosome 16</td></tr><tr><td style=\"white-space:nowrap\">LA21270-6<a name=\"loinc-answers-LA21270-6\"> </a></td><td>Chromosome 17</td></tr><tr><td style=\"white-space:nowrap\">LA21271-4<a name=\"loinc-answers-LA21271-4\"> </a></td><td>Chromosome 18</td></tr><tr><td style=\"white-space:nowrap\">LA21272-2<a name=\"loinc-answers-LA21272-2\"> </a></td><td>Chromosome 19</td></tr><tr><td style=\"white-space:nowrap\">LA21273-0<a name=\"loinc-answers-LA21273-0\"> </a></td><td>Chromosome 20</td></tr><tr><td style=\"white-space:nowrap\">LA21274-8<a name=\"loinc-answers-LA21274-8\"> </a></td><td>Chromosome 21</td></tr><tr><td style=\"white-space:nowrap\">LA21275-5<a name=\"loinc-answers-LA21275-5\"> </a></td><td>Chromosome 22</td></tr><tr><td style=\"white-space:nowrap\">LA21276-3<a name=\"loinc-answers-LA21276-3\"> </a></td><td>Chromosome X</td></tr><tr><td style=\"white-space:nowrap\">LA21277-1<a name=\"loinc-answers-LA21277-1\"> </a></td><td>Chromosome Y</td></tr></table></div>" - }, - "url": "ncpi:loinc-answers", - "version": "0.2.0", - "name": "LoincAnswers", - "title": "LOINC Answers", - "status": "draft", - "experimental": false, - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "LOINC ANSWERS used by NCPI resources", - "caseSensitive": true, - "content": "complete", - "count": 24, - "concept": [ - { - "code": "LA21254-0", - "display": "Chromosome 1" - }, - { - "code": "LA21255-7", - "display": "Chromosome 2" - }, - { - "code": "LA21256-5", - "display": "Chromosome 3" - }, - { - "code": "LA21257-3", - "display": "Chromosome 4" - }, - { - "code": "LA21258-1", - "display": "Chromosome 5" - }, - { - "code": "LA21259-9", - "display": "Chromosome 6" - }, - { - "code": "LA21260-7", - "display": "Chromosome 7" - }, - { - "code": "LA21261-5", - "display": "Chromosome 8" - }, - { - "code": "LA21262-3", - "display": "Chromosome 9" - }, - { - "code": "LA21263-1", - "display": "Chromosome 10" - }, - { - "code": "LA21264-9", - "display": "Chromosome 11" - }, - { - "code": "LA21265-6", - "display": "Chromosome 12" - }, - { - "code": "LA21266-4", - "display": "Chromosome 13" - }, - { - "code": "LA21267-2", - "display": "Chromosome 14" - }, - { - "code": "LA21268-0", - "display": "Chromosome 15" - }, - { - "code": "LA21269-8", - "display": "Chromosome 16" - }, - { - "code": "LA21270-6", - "display": "Chromosome 17" - }, - { - "code": "LA21271-4", - "display": "Chromosome 18" - }, - { - "code": "LA21272-2", - "display": "Chromosome 19" - }, - { - "code": "LA21273-0", - "display": "Chromosome 20" - }, - { - "code": "LA21274-8", - "display": "Chromosome 21" - }, - { - "code": "LA21275-5", - "display": "Chromosome 22" - }, - { - "code": "LA21276-3", - "display": "Chromosome X" - }, - { - "code": "LA21277-1", - "display": "Chromosome Y" - } - ] +{ + "resourceType" : "CodeSystem", + "id" : "loinc-answers", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>ncpi:loinc-answers</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">LA21254-0<a name=\"loinc-answers-LA21254-0\"> </a></td><td>Chromosome 1</td></tr><tr><td style=\"white-space:nowrap\">LA21255-7<a name=\"loinc-answers-LA21255-7\"> </a></td><td>Chromosome 2</td></tr><tr><td style=\"white-space:nowrap\">LA21256-5<a name=\"loinc-answers-LA21256-5\"> </a></td><td>Chromosome 3</td></tr><tr><td style=\"white-space:nowrap\">LA21257-3<a name=\"loinc-answers-LA21257-3\"> </a></td><td>Chromosome 4</td></tr><tr><td style=\"white-space:nowrap\">LA21258-1<a name=\"loinc-answers-LA21258-1\"> </a></td><td>Chromosome 5</td></tr><tr><td style=\"white-space:nowrap\">LA21259-9<a name=\"loinc-answers-LA21259-9\"> </a></td><td>Chromosome 6</td></tr><tr><td style=\"white-space:nowrap\">LA21260-7<a name=\"loinc-answers-LA21260-7\"> </a></td><td>Chromosome 7</td></tr><tr><td style=\"white-space:nowrap\">LA21261-5<a name=\"loinc-answers-LA21261-5\"> </a></td><td>Chromosome 8</td></tr><tr><td style=\"white-space:nowrap\">LA21262-3<a name=\"loinc-answers-LA21262-3\"> </a></td><td>Chromosome 9</td></tr><tr><td style=\"white-space:nowrap\">LA21263-1<a name=\"loinc-answers-LA21263-1\"> </a></td><td>Chromosome 10</td></tr><tr><td style=\"white-space:nowrap\">LA21264-9<a name=\"loinc-answers-LA21264-9\"> </a></td><td>Chromosome 11</td></tr><tr><td style=\"white-space:nowrap\">LA21265-6<a name=\"loinc-answers-LA21265-6\"> </a></td><td>Chromosome 12</td></tr><tr><td style=\"white-space:nowrap\">LA21266-4<a name=\"loinc-answers-LA21266-4\"> </a></td><td>Chromosome 13</td></tr><tr><td style=\"white-space:nowrap\">LA21267-2<a name=\"loinc-answers-LA21267-2\"> </a></td><td>Chromosome 14</td></tr><tr><td style=\"white-space:nowrap\">LA21268-0<a name=\"loinc-answers-LA21268-0\"> </a></td><td>Chromosome 15</td></tr><tr><td style=\"white-space:nowrap\">LA21269-8<a name=\"loinc-answers-LA21269-8\"> </a></td><td>Chromosome 16</td></tr><tr><td style=\"white-space:nowrap\">LA21270-6<a name=\"loinc-answers-LA21270-6\"> </a></td><td>Chromosome 17</td></tr><tr><td style=\"white-space:nowrap\">LA21271-4<a name=\"loinc-answers-LA21271-4\"> </a></td><td>Chromosome 18</td></tr><tr><td style=\"white-space:nowrap\">LA21272-2<a name=\"loinc-answers-LA21272-2\"> </a></td><td>Chromosome 19</td></tr><tr><td style=\"white-space:nowrap\">LA21273-0<a name=\"loinc-answers-LA21273-0\"> </a></td><td>Chromosome 20</td></tr><tr><td style=\"white-space:nowrap\">LA21274-8<a name=\"loinc-answers-LA21274-8\"> </a></td><td>Chromosome 21</td></tr><tr><td style=\"white-space:nowrap\">LA21275-5<a name=\"loinc-answers-LA21275-5\"> </a></td><td>Chromosome 22</td></tr><tr><td style=\"white-space:nowrap\">LA21276-3<a name=\"loinc-answers-LA21276-3\"> </a></td><td>Chromosome X</td></tr><tr><td style=\"white-space:nowrap\">LA21277-1<a name=\"loinc-answers-LA21277-1\"> </a></td><td>Chromosome Y</td></tr></table></div>" + }, + "url" : "ncpi:loinc-answers", + "version" : "0.2.0", + "name" : "LoincAnswers", + "title" : "LOINC Answers", + "status" : "draft", + "experimental" : false, + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "LOINC ANSWERS used by NCPI resources", + "caseSensitive" : true, + "content" : "complete", + "count" : 24, + "concept" : [{ + "code" : "LA21254-0", + "display" : "Chromosome 1" + }, + { + "code" : "LA21255-7", + "display" : "Chromosome 2" + }, + { + "code" : "LA21256-5", + "display" : "Chromosome 3" + }, + { + "code" : "LA21257-3", + "display" : "Chromosome 4" + }, + { + "code" : "LA21258-1", + "display" : "Chromosome 5" + }, + { + "code" : "LA21259-9", + "display" : "Chromosome 6" + }, + { + "code" : "LA21260-7", + "display" : "Chromosome 7" + }, + { + "code" : "LA21261-5", + "display" : "Chromosome 8" + }, + { + "code" : "LA21262-3", + "display" : "Chromosome 9" + }, + { + "code" : "LA21263-1", + "display" : "Chromosome 10" + }, + { + "code" : "LA21264-9", + "display" : "Chromosome 11" + }, + { + "code" : "LA21265-6", + "display" : "Chromosome 12" + }, + { + "code" : "LA21266-4", + "display" : "Chromosome 13" + }, + { + "code" : "LA21267-2", + "display" : "Chromosome 14" + }, + { + "code" : "LA21268-0", + "display" : "Chromosome 15" + }, + { + "code" : "LA21269-8", + "display" : "Chromosome 16" + }, + { + "code" : "LA21270-6", + "display" : "Chromosome 17" + }, + { + "code" : "LA21271-4", + "display" : "Chromosome 18" + }, + { + "code" : "LA21272-2", + "display" : "Chromosome 19" + }, + { + "code" : "LA21273-0", + "display" : "Chromosome 20" + }, + { + "code" : "LA21274-8", + "display" : "Chromosome 21" + }, + { + "code" : "LA21275-5", + "display" : "Chromosome 22" + }, + { + "code" : "LA21276-3", + "display" : "Chromosome X" + }, + { + "code" : "LA21277-1", + "display" : "Chromosome Y" + }] } \ No newline at end of file diff --git a/CodeSystem-loinc-answers.json.html b/CodeSystem-loinc-answers.json.html index a02ebace..c270155b 100644 --- a/CodeSystem-loinc-answers.json.html +++ b/CodeSystem-loinc-answers.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: LOINC Answers - JSON Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: LOINC Answers - JSON Representation</h2> "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a>" : "LOINC Answers", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a>" : "draft", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">experimental</a>" : false, - "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>" : [ { @@ -453,7 +453,7 @@ <h2 id="root">: LOINC Answers - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-loinc-answers.ttl b/CodeSystem-loinc-answers.ttl index 68266239..534de102 100644 --- a/CodeSystem-loinc-answers.ttl +++ b/CodeSystem-loinc-answers.ttl @@ -7,19 +7,19 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/loinc-answers> a fhir:CodeSystem; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "loinc-answers"]; + fhir:Resource.id [ fhir:value "loinc-answers"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>ncpi:loinc-answers</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">LA21254-0<a name=\"loinc-answers-LA21254-0\"> </a></td><td>Chromosome 1</td></tr><tr><td style=\"white-space:nowrap\">LA21255-7<a name=\"loinc-answers-LA21255-7\"> </a></td><td>Chromosome 2</td></tr><tr><td style=\"white-space:nowrap\">LA21256-5<a name=\"loinc-answers-LA21256-5\"> </a></td><td>Chromosome 3</td></tr><tr><td style=\"white-space:nowrap\">LA21257-3<a name=\"loinc-answers-LA21257-3\"> </a></td><td>Chromosome 4</td></tr><tr><td style=\"white-space:nowrap\">LA21258-1<a name=\"loinc-answers-LA21258-1\"> </a></td><td>Chromosome 5</td></tr><tr><td style=\"white-space:nowrap\">LA21259-9<a name=\"loinc-answers-LA21259-9\"> </a></td><td>Chromosome 6</td></tr><tr><td style=\"white-space:nowrap\">LA21260-7<a name=\"loinc-answers-LA21260-7\"> </a></td><td>Chromosome 7</td></tr><tr><td style=\"white-space:nowrap\">LA21261-5<a name=\"loinc-answers-LA21261-5\"> </a></td><td>Chromosome 8</td></tr><tr><td style=\"white-space:nowrap\">LA21262-3<a name=\"loinc-answers-LA21262-3\"> </a></td><td>Chromosome 9</td></tr><tr><td style=\"white-space:nowrap\">LA21263-1<a name=\"loinc-answers-LA21263-1\"> </a></td><td>Chromosome 10</td></tr><tr><td style=\"white-space:nowrap\">LA21264-9<a name=\"loinc-answers-LA21264-9\"> </a></td><td>Chromosome 11</td></tr><tr><td style=\"white-space:nowrap\">LA21265-6<a name=\"loinc-answers-LA21265-6\"> </a></td><td>Chromosome 12</td></tr><tr><td style=\"white-space:nowrap\">LA21266-4<a name=\"loinc-answers-LA21266-4\"> </a></td><td>Chromosome 13</td></tr><tr><td style=\"white-space:nowrap\">LA21267-2<a name=\"loinc-answers-LA21267-2\"> </a></td><td>Chromosome 14</td></tr><tr><td style=\"white-space:nowrap\">LA21268-0<a name=\"loinc-answers-LA21268-0\"> </a></td><td>Chromosome 15</td></tr><tr><td style=\"white-space:nowrap\">LA21269-8<a name=\"loinc-answers-LA21269-8\"> </a></td><td>Chromosome 16</td></tr><tr><td style=\"white-space:nowrap\">LA21270-6<a name=\"loinc-answers-LA21270-6\"> </a></td><td>Chromosome 17</td></tr><tr><td style=\"white-space:nowrap\">LA21271-4<a name=\"loinc-answers-LA21271-4\"> </a></td><td>Chromosome 18</td></tr><tr><td style=\"white-space:nowrap\">LA21272-2<a name=\"loinc-answers-LA21272-2\"> </a></td><td>Chromosome 19</td></tr><tr><td style=\"white-space:nowrap\">LA21273-0<a name=\"loinc-answers-LA21273-0\"> </a></td><td>Chromosome 20</td></tr><tr><td style=\"white-space:nowrap\">LA21274-8<a name=\"loinc-answers-LA21274-8\"> </a></td><td>Chromosome 21</td></tr><tr><td style=\"white-space:nowrap\">LA21275-5<a name=\"loinc-answers-LA21275-5\"> </a></td><td>Chromosome 22</td></tr><tr><td style=\"white-space:nowrap\">LA21276-3<a name=\"loinc-answers-LA21276-3\"> </a></td><td>Chromosome X</td></tr><tr><td style=\"white-space:nowrap\">LA21277-1<a name=\"loinc-answers-LA21277-1\"> </a></td><td>Chromosome Y</td></tr></table></div>" - ]; - fhir:CodeSystem.url [ fhir:value "ncpi:loinc-answers"]; - fhir:CodeSystem.version [ fhir:value "0.2.0"]; - fhir:CodeSystem.name [ fhir:value "LoincAnswers"]; - fhir:CodeSystem.title [ fhir:value "LOINC Answers"]; - fhir:CodeSystem.status [ fhir:value "draft"]; - fhir:CodeSystem.experimental [ fhir:value "false"^^xsd:boolean]; - fhir:CodeSystem.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:CodeSystem.url [ fhir:value "ncpi:loinc-answers"]; # + fhir:CodeSystem.version [ fhir:value "0.2.0"]; # + fhir:CodeSystem.name [ fhir:value "LoincAnswers"]; # + fhir:CodeSystem.title [ fhir:value "LOINC Answers"]; # + fhir:CodeSystem.status [ fhir:value "draft"]; # + fhir:CodeSystem.experimental [ fhir:value "false"^^xsd:boolean]; # + fhir:CodeSystem.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:CodeSystem.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -37,11 +37,11 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:CodeSystem.description [ fhir:value "LOINC ANSWERS used by NCPI resources"]; - fhir:CodeSystem.caseSensitive [ fhir:value "true"^^xsd:boolean]; - fhir:CodeSystem.content [ fhir:value "complete"]; - fhir:CodeSystem.count [ fhir:value "24"^^xsd:nonNegativeInteger]; + ]; # + fhir:CodeSystem.description [ fhir:value "LOINC ANSWERS used by NCPI resources"]; # + fhir:CodeSystem.caseSensitive [ fhir:value "true"^^xsd:boolean]; # + fhir:CodeSystem.content [ fhir:value "complete"]; # + fhir:CodeSystem.count [ fhir:value "24"^^xsd:nonNegativeInteger]; # fhir:CodeSystem.concept [ fhir:index 0; fhir:CodeSystem.concept.code [ fhir:value "LA21254-0" ]; @@ -138,7 +138,7 @@ fhir:index 23; fhir:CodeSystem.concept.code [ fhir:value "LA21277-1" ]; fhir:CodeSystem.concept.display [ fhir:value "Chromosome Y" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/CodeSystem-loinc-answers.ttl.html b/CodeSystem-loinc-answers.ttl.html index 96b13f67..b5d4d3b1 100644 --- a/CodeSystem-loinc-answers.ttl.html +++ b/CodeSystem-loinc-answers.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: LOINC Answers - TTL Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,19 +294,19 @@ <h2 id="root">: LOINC Answers - TTL Representation</h2> a fhir:CodeSystem; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "loinc-answers"]; + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "loinc-answers"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>ncpi:loinc-answers</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">LA21254-0<a name=\"loinc-answers-LA21254-0\"> </a></td><td>Chromosome 1</td></tr><tr><td style=\"white-space:nowrap\">LA21255-7<a name=\"loinc-answers-LA21255-7\"> </a></td><td>Chromosome 2</td></tr><tr><td style=\"white-space:nowrap\">LA21256-5<a name=\"loinc-answers-LA21256-5\"> </a></td><td>Chromosome 3</td></tr><tr><td style=\"white-space:nowrap\">LA21257-3<a name=\"loinc-answers-LA21257-3\"> </a></td><td>Chromosome 4</td></tr><tr><td style=\"white-space:nowrap\">LA21258-1<a name=\"loinc-answers-LA21258-1\"> </a></td><td>Chromosome 5</td></tr><tr><td style=\"white-space:nowrap\">LA21259-9<a name=\"loinc-answers-LA21259-9\"> </a></td><td>Chromosome 6</td></tr><tr><td style=\"white-space:nowrap\">LA21260-7<a name=\"loinc-answers-LA21260-7\"> </a></td><td>Chromosome 7</td></tr><tr><td style=\"white-space:nowrap\">LA21261-5<a name=\"loinc-answers-LA21261-5\"> </a></td><td>Chromosome 8</td></tr><tr><td style=\"white-space:nowrap\">LA21262-3<a name=\"loinc-answers-LA21262-3\"> </a></td><td>Chromosome 9</td></tr><tr><td style=\"white-space:nowrap\">LA21263-1<a name=\"loinc-answers-LA21263-1\"> </a></td><td>Chromosome 10</td></tr><tr><td style=\"white-space:nowrap\">LA21264-9<a name=\"loinc-answers-LA21264-9\"> </a></td><td>Chromosome 11</td></tr><tr><td style=\"white-space:nowrap\">LA21265-6<a name=\"loinc-answers-LA21265-6\"> </a></td><td>Chromosome 12</td></tr><tr><td style=\"white-space:nowrap\">LA21266-4<a name=\"loinc-answers-LA21266-4\"> </a></td><td>Chromosome 13</td></tr><tr><td style=\"white-space:nowrap\">LA21267-2<a name=\"loinc-answers-LA21267-2\"> </a></td><td>Chromosome 14</td></tr><tr><td style=\"white-space:nowrap\">LA21268-0<a name=\"loinc-answers-LA21268-0\"> </a></td><td>Chromosome 15</td></tr><tr><td style=\"white-space:nowrap\">LA21269-8<a name=\"loinc-answers-LA21269-8\"> </a></td><td>Chromosome 16</td></tr><tr><td style=\"white-space:nowrap\">LA21270-6<a name=\"loinc-answers-LA21270-6\"> </a></td><td>Chromosome 17</td></tr><tr><td style=\"white-space:nowrap\">LA21271-4<a name=\"loinc-answers-LA21271-4\"> </a></td><td>Chromosome 18</td></tr><tr><td style=\"white-space:nowrap\">LA21272-2<a name=\"loinc-answers-LA21272-2\"> </a></td><td>Chromosome 19</td></tr><tr><td style=\"white-space:nowrap\">LA21273-0<a name=\"loinc-answers-LA21273-0\"> </a></td><td>Chromosome 20</td></tr><tr><td style=\"white-space:nowrap\">LA21274-8<a name=\"loinc-answers-LA21274-8\"> </a></td><td>Chromosome 21</td></tr><tr><td style=\"white-space:nowrap\">LA21275-5<a name=\"loinc-answers-LA21275-5\"> </a></td><td>Chromosome 22</td></tr><tr><td style=\"white-space:nowrap\">LA21276-3<a name=\"loinc-answers-LA21276-3\"> </a></td><td>Chromosome X</td></tr><tr><td style=\"white-space:nowrap\">LA21277-1<a name=\"loinc-answers-LA21277-1\"> </a></td><td>Chromosome Y</td></tr></table></div>" - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "ncpi:loinc-answers"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "LoincAnswers"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "LOINC Answers"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">fhir:CodeSystem.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "ncpi:loinc-answers"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "LoincAnswers"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "LOINC Answers"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">fhir:CodeSystem.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">fhir:CodeSystem.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -322,11 +322,11 @@ <h2 id="root">: LOINC Answers - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "LOINC ANSWERS used by NCPI resources"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.caseSensitive">fhir:CodeSystem.caseSensitive</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "complete"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.count">fhir:CodeSystem.count</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "24"^^xsd:nonNegativeInteger]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "LOINC ANSWERS used by NCPI resources"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.caseSensitive">fhir:CodeSystem.caseSensitive</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "complete"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.count">fhir:CodeSystem.count</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "24"^^xsd:nonNegativeInteger]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept">fhir:CodeSystem.concept</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "LA21254-0" ]; @@ -423,7 +423,7 @@ <h2 id="root">: LOINC Answers - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 23; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "LA21277-1" ]; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.display">fhir:CodeSystem.concept.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Chromosome Y" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -461,7 +461,7 @@ <h2 id="root">: LOINC Answers - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-loinc-answers.xlsx b/CodeSystem-loinc-answers.xlsx index b02316ca..f0b646d9 100644 Binary files a/CodeSystem-loinc-answers.xlsx and b/CodeSystem-loinc-answers.xlsx differ diff --git a/CodeSystem-loinc-answers.xml b/CodeSystem-loinc-answers.xml index 19489005..feb9ffef 100644 --- a/CodeSystem-loinc-answers.xml +++ b/CodeSystem-loinc-answers.xml @@ -11,7 +11,7 @@ <title value="LOINC Answers"/> <status value="draft"/> <experimental value="false"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/CodeSystem-loinc-answers.xml.html b/CodeSystem-loinc-answers.xml.html index 765076a0..ce9bf155 100644 --- a/CodeSystem-loinc-answers.xml.html +++ b/CodeSystem-loinc-answers.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: LOINC Answers - XML Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: LOINC Answers - XML Representation</h2> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="LOINC Answers"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">experimental</a> <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">value</a>="false"/> - <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -445,7 +445,7 @@ <h2 id="root">: LOINC Answers - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-mondo-testing.html b/CodeSystem-mondo-testing.html index 7056d6f0..6d1e67b6 100644 --- a/CodeSystem-mondo-testing.html +++ b/CodeSystem-mondo-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">CodeSystem: Mondo Disease Ontology - Testing Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">CodeSystem: Mondo Disease Ontology - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-mondo.change.history.html b/CodeSystem-mondo.change.history.html index 36305188..b9b37427 100644 --- a/CodeSystem-mondo.change.history.html +++ b/CodeSystem-mondo.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Mondo - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-mondo.html b/CodeSystem-mondo.html index 7d0439e6..ae5a1624 100644 --- a/CodeSystem-mondo.html +++ b/CodeSystem-mondo.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -281,7 +281,7 @@ <h2 id="root">CodeSystem: Mondo Disease Ontology Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -350,7 +350,7 @@ <h2 id="root">CodeSystem: Mondo Disease Ontology <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-mondo.json b/CodeSystem-mondo.json index 6edd7b57..b682003e 100644 --- a/CodeSystem-mondo.json +++ b/CodeSystem-mondo.json @@ -1,55 +1,47 @@ -{ - "resourceType": "CodeSystem", - "id": "mondo", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://purl.obolibrary.org/obo/mondo.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">MONDO:0005072<a name=\"mondo-MONDO.580005072\"> </a></td><td>neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">MONDO:0002749<a name=\"mondo-MONDO.580002749\"> </a></td><td>extracranial neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">MONDO:0008542<a name=\"mondo-MONDO.580008542\"> </a></td><td>tetralogy of fallot</td></tr></table></div>" - }, - "url": "http://purl.obolibrary.org/obo/mondo.owl", - "version": "0.2.0", - "name": "Mondo", - "title": "Mondo Disease Ontology", - "status": "draft", - "experimental": false, - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "The Mondo Disease Ontology (Mondo) aims to harmonize disease definitions across the world. The name Mondo comes from the latin word 'mundus' and means 'for the world.'", - "caseSensitive": true, - "content": "fragment", - "count": 3, - "concept": [ - { - "code": "MONDO:0005072", - "display": "neuroblastoma" - }, - { - "code": "MONDO:0002749", - "display": "extracranial neuroblastoma" - }, - { - "code": "MONDO:0008542", - "display": "tetralogy of fallot" - } - ] +{ + "resourceType" : "CodeSystem", + "id" : "mondo", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://purl.obolibrary.org/obo/mondo.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">MONDO:0005072<a name=\"mondo-MONDO.580005072\"> </a></td><td>neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">MONDO:0002749<a name=\"mondo-MONDO.580002749\"> </a></td><td>extracranial neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">MONDO:0008542<a name=\"mondo-MONDO.580008542\"> </a></td><td>tetralogy of fallot</td></tr></table></div>" + }, + "url" : "http://purl.obolibrary.org/obo/mondo.owl", + "version" : "0.2.0", + "name" : "Mondo", + "title" : "Mondo Disease Ontology", + "status" : "draft", + "experimental" : false, + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "The Mondo Disease Ontology (Mondo) aims to harmonize disease definitions across the world. The name Mondo comes from the latin word 'mundus' and means 'for the world.'", + "caseSensitive" : true, + "content" : "fragment", + "count" : 3, + "concept" : [{ + "code" : "MONDO:0005072", + "display" : "neuroblastoma" + }, + { + "code" : "MONDO:0002749", + "display" : "extracranial neuroblastoma" + }, + { + "code" : "MONDO:0008542", + "display" : "tetralogy of fallot" + }] } \ No newline at end of file diff --git a/CodeSystem-mondo.json.html b/CodeSystem-mondo.json.html index 2ce1044c..f52ef8ca 100644 --- a/CodeSystem-mondo.json.html +++ b/CodeSystem-mondo.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Mondo Disease Ontology - JSON Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: Mondo Disease Ontology - JSON Representation</h2> "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a>" : "Mondo Disease Ontology", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a>" : "draft", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">experimental</a>" : false, - "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>" : [ { @@ -369,7 +369,7 @@ <h2 id="root">: Mondo Disease Ontology - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-mondo.ttl b/CodeSystem-mondo.ttl index dd807634..a58ac4a5 100644 --- a/CodeSystem-mondo.ttl +++ b/CodeSystem-mondo.ttl @@ -7,19 +7,19 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/mondo> a fhir:CodeSystem; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "mondo"]; + fhir:Resource.id [ fhir:value "mondo"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://purl.obolibrary.org/obo/mondo.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">MONDO:0005072<a name=\"mondo-MONDO.580005072\"> </a></td><td>neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">MONDO:0002749<a name=\"mondo-MONDO.580002749\"> </a></td><td>extracranial neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">MONDO:0008542<a name=\"mondo-MONDO.580008542\"> </a></td><td>tetralogy of fallot</td></tr></table></div>" - ]; - fhir:CodeSystem.url [ fhir:value "http://purl.obolibrary.org/obo/mondo.owl"]; - fhir:CodeSystem.version [ fhir:value "0.2.0"]; - fhir:CodeSystem.name [ fhir:value "Mondo"]; - fhir:CodeSystem.title [ fhir:value "Mondo Disease Ontology"]; - fhir:CodeSystem.status [ fhir:value "draft"]; - fhir:CodeSystem.experimental [ fhir:value "false"^^xsd:boolean]; - fhir:CodeSystem.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:CodeSystem.url [ fhir:value "http://purl.obolibrary.org/obo/mondo.owl"]; # + fhir:CodeSystem.version [ fhir:value "0.2.0"]; # + fhir:CodeSystem.name [ fhir:value "Mondo"]; # + fhir:CodeSystem.title [ fhir:value "Mondo Disease Ontology"]; # + fhir:CodeSystem.status [ fhir:value "draft"]; # + fhir:CodeSystem.experimental [ fhir:value "false"^^xsd:boolean]; # + fhir:CodeSystem.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:CodeSystem.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -37,11 +37,11 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:CodeSystem.description [ fhir:value "The Mondo Disease Ontology (Mondo) aims to harmonize disease definitions across the world. The name Mondo comes from the latin word 'mundus' and means 'for the world.'"]; - fhir:CodeSystem.caseSensitive [ fhir:value "true"^^xsd:boolean]; - fhir:CodeSystem.content [ fhir:value "fragment"]; - fhir:CodeSystem.count [ fhir:value "3"^^xsd:nonNegativeInteger]; + ]; # + fhir:CodeSystem.description [ fhir:value "The Mondo Disease Ontology (Mondo) aims to harmonize disease definitions across the world. The name Mondo comes from the latin word 'mundus' and means 'for the world.'"]; # + fhir:CodeSystem.caseSensitive [ fhir:value "true"^^xsd:boolean]; # + fhir:CodeSystem.content [ fhir:value "fragment"]; # + fhir:CodeSystem.count [ fhir:value "3"^^xsd:nonNegativeInteger]; # fhir:CodeSystem.concept [ fhir:index 0; fhir:CodeSystem.concept.code [ fhir:value "MONDO:0005072" ]; @@ -54,7 +54,7 @@ fhir:index 2; fhir:CodeSystem.concept.code [ fhir:value "MONDO:0008542" ]; fhir:CodeSystem.concept.display [ fhir:value "tetralogy of fallot" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/CodeSystem-mondo.ttl.html b/CodeSystem-mondo.ttl.html index 3b54a1da..3ef87a1e 100644 --- a/CodeSystem-mondo.ttl.html +++ b/CodeSystem-mondo.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Mondo Disease Ontology - TTL Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,19 +294,19 @@ <h2 id="root">: Mondo Disease Ontology - TTL Representation</h2> a fhir:CodeSystem; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "mondo"]; + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "mondo"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://purl.obolibrary.org/obo/mondo.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">MONDO:0005072<a name=\"mondo-MONDO.580005072\"> </a></td><td>neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">MONDO:0002749<a name=\"mondo-MONDO.580002749\"> </a></td><td>extracranial neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">MONDO:0008542<a name=\"mondo-MONDO.580008542\"> </a></td><td>tetralogy of fallot</td></tr></table></div>" - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://purl.obolibrary.org/obo/mondo.owl"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Mondo"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Mondo Disease Ontology"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">fhir:CodeSystem.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://purl.obolibrary.org/obo/mondo.owl"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Mondo"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Mondo Disease Ontology"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">fhir:CodeSystem.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">fhir:CodeSystem.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -322,11 +322,11 @@ <h2 id="root">: Mondo Disease Ontology - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "The Mondo Disease Ontology (Mondo) aims to harmonize disease definitions across the world. The name Mondo comes from the latin word 'mundus' and means 'for the world.'"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.caseSensitive">fhir:CodeSystem.caseSensitive</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "fragment"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.count">fhir:CodeSystem.count</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "3"^^xsd:nonNegativeInteger]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "The Mondo Disease Ontology (Mondo) aims to harmonize disease definitions across the world. The name Mondo comes from the latin word 'mundus' and means 'for the world.'"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.caseSensitive">fhir:CodeSystem.caseSensitive</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "fragment"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.count">fhir:CodeSystem.count</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "3"^^xsd:nonNegativeInteger]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept">fhir:CodeSystem.concept</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "MONDO:0005072" ]; @@ -339,7 +339,7 @@ <h2 id="root">: Mondo Disease Ontology - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 2; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "MONDO:0008542" ]; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.display">fhir:CodeSystem.concept.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "tetralogy of fallot" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -377,7 +377,7 @@ <h2 id="root">: Mondo Disease Ontology - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-mondo.xlsx b/CodeSystem-mondo.xlsx index 0f383352..3663bff0 100644 Binary files a/CodeSystem-mondo.xlsx and b/CodeSystem-mondo.xlsx differ diff --git a/CodeSystem-mondo.xml b/CodeSystem-mondo.xml index e00193a4..1bc8e341 100644 --- a/CodeSystem-mondo.xml +++ b/CodeSystem-mondo.xml @@ -11,7 +11,7 @@ <title value="Mondo Disease Ontology"/> <status value="draft"/> <experimental value="false"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/CodeSystem-mondo.xml.html b/CodeSystem-mondo.xml.html index a711eaf0..09edffab 100644 --- a/CodeSystem-mondo.xml.html +++ b/CodeSystem-mondo.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Mondo Disease Ontology - XML Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: Mondo Disease Ontology - XML Representation</h2> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Mondo Disease Ontology"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">experimental</a> <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">value</a>="false"/> - <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -362,7 +362,7 @@ <h2 id="root">: Mondo Disease Ontology - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-ncit-testing.html b/CodeSystem-ncit-testing.html index ff04fd59..9026d36d 100644 --- a/CodeSystem-ncit-testing.html +++ b/CodeSystem-ncit-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">CodeSystem: NCI Thesaurus - Testing Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">CodeSystem: NCI Thesaurus - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-ncit.change.history.html b/CodeSystem-ncit.change.history.html index 334fa935..02117836 100644 --- a/CodeSystem-ncit.change.history.html +++ b/CodeSystem-ncit.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: NCIt - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-ncit.html b/CodeSystem-ncit.html index 2c230ae5..2616e386 100644 --- a/CodeSystem-ncit.html +++ b/CodeSystem-ncit.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -281,7 +281,7 @@ <h2 id="root">CodeSystem: NCI Thesaurus Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -349,7 +349,7 @@ <h2 id="root">CodeSystem: NCI Thesaurus <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-ncit.json b/CodeSystem-ncit.json index 1594be4e..266c93a7 100644 --- a/CodeSystem-ncit.json +++ b/CodeSystem-ncit.json @@ -1,55 +1,47 @@ -{ - "resourceType": "CodeSystem", - "id": "ncit", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://purl.obolibrary.org/obo/ncit.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">C3270<a name=\"ncit-C3270\"> </a></td><td>Neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">C5437<a name=\"ncit-C5437\"> </a></td><td>Extracranial Neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">C84505<a name=\"ncit-C84505\"> </a></td><td>Tetralogy of Fallot</td></tr></table></div>" - }, - "url": "http://purl.obolibrary.org/obo/ncit.owl", - "version": "0.2.0", - "name": "NCIt", - "title": "NCI Thesaurus", - "status": "draft", - "experimental": false, - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "NCI Thesaurus (NCIt) provides reference terminology for many NCI and other systems. It covers vocabulary for clinical care, translational and basic research, and public information and administrative activities.", - "caseSensitive": true, - "content": "fragment", - "count": 3, - "concept": [ - { - "code": "C3270", - "display": "Neuroblastoma" - }, - { - "code": "C5437", - "display": "Extracranial Neuroblastoma" - }, - { - "code": "C84505", - "display": "Tetralogy of Fallot" - } - ] +{ + "resourceType" : "CodeSystem", + "id" : "ncit", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://purl.obolibrary.org/obo/ncit.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">C3270<a name=\"ncit-C3270\"> </a></td><td>Neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">C5437<a name=\"ncit-C5437\"> </a></td><td>Extracranial Neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">C84505<a name=\"ncit-C84505\"> </a></td><td>Tetralogy of Fallot</td></tr></table></div>" + }, + "url" : "http://purl.obolibrary.org/obo/ncit.owl", + "version" : "0.2.0", + "name" : "NCIt", + "title" : "NCI Thesaurus", + "status" : "draft", + "experimental" : false, + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "NCI Thesaurus (NCIt) provides reference terminology for many NCI and other systems. It covers vocabulary for clinical care, translational and basic research, and public information and administrative activities.", + "caseSensitive" : true, + "content" : "fragment", + "count" : 3, + "concept" : [{ + "code" : "C3270", + "display" : "Neuroblastoma" + }, + { + "code" : "C5437", + "display" : "Extracranial Neuroblastoma" + }, + { + "code" : "C84505", + "display" : "Tetralogy of Fallot" + }] } \ No newline at end of file diff --git a/CodeSystem-ncit.json.html b/CodeSystem-ncit.json.html index 262fb7bb..1e2a6849 100644 --- a/CodeSystem-ncit.json.html +++ b/CodeSystem-ncit.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: NCI Thesaurus - JSON Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: NCI Thesaurus - JSON Representation</h2> "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a>" : "NCI Thesaurus", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a>" : "draft", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">experimental</a>" : false, - "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>" : [ { @@ -369,7 +369,7 @@ <h2 id="root">: NCI Thesaurus - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-ncit.ttl b/CodeSystem-ncit.ttl index 4d17fdea..57d193ec 100644 --- a/CodeSystem-ncit.ttl +++ b/CodeSystem-ncit.ttl @@ -7,19 +7,19 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncit> a fhir:CodeSystem; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "ncit"]; + fhir:Resource.id [ fhir:value "ncit"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://purl.obolibrary.org/obo/ncit.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">C3270<a name=\"ncit-C3270\"> </a></td><td>Neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">C5437<a name=\"ncit-C5437\"> </a></td><td>Extracranial Neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">C84505<a name=\"ncit-C84505\"> </a></td><td>Tetralogy of Fallot</td></tr></table></div>" - ]; - fhir:CodeSystem.url [ fhir:value "http://purl.obolibrary.org/obo/ncit.owl"]; - fhir:CodeSystem.version [ fhir:value "0.2.0"]; - fhir:CodeSystem.name [ fhir:value "NCIt"]; - fhir:CodeSystem.title [ fhir:value "NCI Thesaurus"]; - fhir:CodeSystem.status [ fhir:value "draft"]; - fhir:CodeSystem.experimental [ fhir:value "false"^^xsd:boolean]; - fhir:CodeSystem.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:CodeSystem.url [ fhir:value "http://purl.obolibrary.org/obo/ncit.owl"]; # + fhir:CodeSystem.version [ fhir:value "0.2.0"]; # + fhir:CodeSystem.name [ fhir:value "NCIt"]; # + fhir:CodeSystem.title [ fhir:value "NCI Thesaurus"]; # + fhir:CodeSystem.status [ fhir:value "draft"]; # + fhir:CodeSystem.experimental [ fhir:value "false"^^xsd:boolean]; # + fhir:CodeSystem.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:CodeSystem.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -37,11 +37,11 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:CodeSystem.description [ fhir:value "NCI Thesaurus (NCIt) provides reference terminology for many NCI and other systems. It covers vocabulary for clinical care, translational and basic research, and public information and administrative activities."]; - fhir:CodeSystem.caseSensitive [ fhir:value "true"^^xsd:boolean]; - fhir:CodeSystem.content [ fhir:value "fragment"]; - fhir:CodeSystem.count [ fhir:value "3"^^xsd:nonNegativeInteger]; + ]; # + fhir:CodeSystem.description [ fhir:value "NCI Thesaurus (NCIt) provides reference terminology for many NCI and other systems. It covers vocabulary for clinical care, translational and basic research, and public information and administrative activities."]; # + fhir:CodeSystem.caseSensitive [ fhir:value "true"^^xsd:boolean]; # + fhir:CodeSystem.content [ fhir:value "fragment"]; # + fhir:CodeSystem.count [ fhir:value "3"^^xsd:nonNegativeInteger]; # fhir:CodeSystem.concept [ fhir:index 0; fhir:CodeSystem.concept.code [ fhir:value "C3270" ]; @@ -54,7 +54,7 @@ fhir:index 2; fhir:CodeSystem.concept.code [ fhir:value "C84505" ]; fhir:CodeSystem.concept.display [ fhir:value "Tetralogy of Fallot" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/CodeSystem-ncit.ttl.html b/CodeSystem-ncit.ttl.html index 2d006506..995692ae 100644 --- a/CodeSystem-ncit.ttl.html +++ b/CodeSystem-ncit.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: NCI Thesaurus - TTL Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,19 +294,19 @@ <h2 id="root">: NCI Thesaurus - TTL Representation</h2> a fhir:CodeSystem; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncit"]; + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncit"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://purl.obolibrary.org/obo/ncit.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">C3270<a name=\"ncit-C3270\"> </a></td><td>Neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">C5437<a name=\"ncit-C5437\"> </a></td><td>Extracranial Neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">C84505<a name=\"ncit-C84505\"> </a></td><td>Tetralogy of Fallot</td></tr></table></div>" - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://purl.obolibrary.org/obo/ncit.owl"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCIt"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCI Thesaurus"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">fhir:CodeSystem.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://purl.obolibrary.org/obo/ncit.owl"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCIt"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCI Thesaurus"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">fhir:CodeSystem.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">fhir:CodeSystem.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -322,11 +322,11 @@ <h2 id="root">: NCI Thesaurus - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "NCI Thesaurus (NCIt) provides reference terminology for many NCI and other systems. It covers vocabulary for clinical care, translational and basic research, and public information and administrative activities."]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.caseSensitive">fhir:CodeSystem.caseSensitive</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "fragment"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.count">fhir:CodeSystem.count</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "3"^^xsd:nonNegativeInteger]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "NCI Thesaurus (NCIt) provides reference terminology for many NCI and other systems. It covers vocabulary for clinical care, translational and basic research, and public information and administrative activities."]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.caseSensitive">fhir:CodeSystem.caseSensitive</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "fragment"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.count">fhir:CodeSystem.count</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "3"^^xsd:nonNegativeInteger]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept">fhir:CodeSystem.concept</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "C3270" ]; @@ -339,7 +339,7 @@ <h2 id="root">: NCI Thesaurus - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 2; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "C84505" ]; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.display">fhir:CodeSystem.concept.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Tetralogy of Fallot" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -377,7 +377,7 @@ <h2 id="root">: NCI Thesaurus - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-ncit.xlsx b/CodeSystem-ncit.xlsx index 90e69631..8deb6636 100644 Binary files a/CodeSystem-ncit.xlsx and b/CodeSystem-ncit.xlsx differ diff --git a/CodeSystem-ncit.xml b/CodeSystem-ncit.xml index 6f4903ff..e05e70e7 100644 --- a/CodeSystem-ncit.xml +++ b/CodeSystem-ncit.xml @@ -11,7 +11,7 @@ <title value="NCI Thesaurus"/> <status value="draft"/> <experimental value="false"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/CodeSystem-ncit.xml.html b/CodeSystem-ncit.xml.html index fddefa55..90d8b71f 100644 --- a/CodeSystem-ncit.xml.html +++ b/CodeSystem-ncit.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: NCI Thesaurus - XML Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: NCI Thesaurus - XML Representation</h2> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCI Thesaurus"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">experimental</a> <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">value</a>="false"/> - <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -362,7 +362,7 @@ <h2 id="root">: NCI Thesaurus - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-ncpi-data-types-testing.html b/CodeSystem-ncpi-data-types-testing.html index 2618940e..e878f3a4 100644 --- a/CodeSystem-ncpi-data-types-testing.html +++ b/CodeSystem-ncpi-data-types-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">CodeSystem: Data Types for NCPI Research - Testing Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">CodeSystem: Data Types for NCPI Research - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-ncpi-data-types.change.history.html b/CodeSystem-ncpi-data-types.change.history.html index dea3c46c..458ca1e1 100644 --- a/CodeSystem-ncpi-data-types.change.history.html +++ b/CodeSystem-ncpi-data-types.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: NcpiDataTypes - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-ncpi-data-types.html b/CodeSystem-ncpi-data-types.html index d549bd74..4385d064 100644 --- a/CodeSystem-ncpi-data-types.html +++ b/CodeSystem-ncpi-data-types.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -281,7 +281,7 @@ <h2 id="root">CodeSystem: Data Types for NCPI Research Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -349,7 +349,7 @@ <h2 id="root">CodeSystem: Data Types for NCPI Research <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-ncpi-data-types.json b/CodeSystem-ncpi-data-types.json index 8c6ddadc..9ed505a3 100644 --- a/CodeSystem-ncpi-data-types.json +++ b/CodeSystem-ncpi-data-types.json @@ -1,53 +1,45 @@ -{ - "resourceType": "CodeSystem", - "id": "ncpi-data-types", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">Exome<a name=\"ncpi-data-types-Exome\"> </a></td><td>Exome Sequence Data</td></tr><tr><td style=\"white-space:nowrap\">WholeGenome<a name=\"ncpi-data-types-WholeGenome\"> </a></td><td>Whole Genome Sequence Data</td></tr><tr><td style=\"white-space:nowrap\">GWAS<a name=\"ncpi-data-types-GWAS\"> </a></td><td>Genome-Wide Association Studies</td></tr></table></div>" - }, - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types", - "version": "0.2.0", - "name": "NcpiDataTypes", - "title": "Data Types for NCPI Research", - "status": "active", - "experimental": false, - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "Data Types for NCPI Research", - "content": "fragment", - "concept": [ - { - "code": "Exome", - "display": "Exome Sequence Data" - }, - { - "code": "WholeGenome", - "display": "Whole Genome Sequence Data" - }, - { - "code": "GWAS", - "display": "Genome-Wide Association Studies" - } - ] +{ + "resourceType" : "CodeSystem", + "id" : "ncpi-data-types", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">Exome<a name=\"ncpi-data-types-Exome\"> </a></td><td>Exome Sequence Data</td></tr><tr><td style=\"white-space:nowrap\">WholeGenome<a name=\"ncpi-data-types-WholeGenome\"> </a></td><td>Whole Genome Sequence Data</td></tr><tr><td style=\"white-space:nowrap\">GWAS<a name=\"ncpi-data-types-GWAS\"> </a></td><td>Genome-Wide Association Studies</td></tr></table></div>" + }, + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types", + "version" : "0.2.0", + "name" : "NcpiDataTypes", + "title" : "Data Types for NCPI Research", + "status" : "active", + "experimental" : false, + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "Data Types for NCPI Research", + "content" : "fragment", + "concept" : [{ + "code" : "Exome", + "display" : "Exome Sequence Data" + }, + { + "code" : "WholeGenome", + "display" : "Whole Genome Sequence Data" + }, + { + "code" : "GWAS", + "display" : "Genome-Wide Association Studies" + }] } \ No newline at end of file diff --git a/CodeSystem-ncpi-data-types.json.html b/CodeSystem-ncpi-data-types.json.html index dc85f6dc..66a267b9 100644 --- a/CodeSystem-ncpi-data-types.json.html +++ b/CodeSystem-ncpi-data-types.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Data Types for NCPI Research - JSON Representation</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: Data Types for NCPI Research - JSON Representation</h2> "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a>" : "Data Types for NCPI Research", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a>" : "active", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">experimental</a>" : false, - "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>" : [ { @@ -367,7 +367,7 @@ <h2 id="root">: Data Types for NCPI Research - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-ncpi-data-types.ttl b/CodeSystem-ncpi-data-types.ttl index 8cebf90d..7c4bd08e 100644 --- a/CodeSystem-ncpi-data-types.ttl +++ b/CodeSystem-ncpi-data-types.ttl @@ -7,19 +7,19 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types> a fhir:CodeSystem; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "ncpi-data-types"]; + fhir:Resource.id [ fhir:value "ncpi-data-types"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">Exome<a name=\"ncpi-data-types-Exome\"> </a></td><td>Exome Sequence Data</td></tr><tr><td style=\"white-space:nowrap\">WholeGenome<a name=\"ncpi-data-types-WholeGenome\"> </a></td><td>Whole Genome Sequence Data</td></tr><tr><td style=\"white-space:nowrap\">GWAS<a name=\"ncpi-data-types-GWAS\"> </a></td><td>Genome-Wide Association Studies</td></tr></table></div>" - ]; - fhir:CodeSystem.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types"]; - fhir:CodeSystem.version [ fhir:value "0.2.0"]; - fhir:CodeSystem.name [ fhir:value "NcpiDataTypes"]; - fhir:CodeSystem.title [ fhir:value "Data Types for NCPI Research"]; - fhir:CodeSystem.status [ fhir:value "active"]; - fhir:CodeSystem.experimental [ fhir:value "false"^^xsd:boolean]; - fhir:CodeSystem.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:CodeSystem.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types"]; # + fhir:CodeSystem.version [ fhir:value "0.2.0"]; # + fhir:CodeSystem.name [ fhir:value "NcpiDataTypes"]; # + fhir:CodeSystem.title [ fhir:value "Data Types for NCPI Research"]; # + fhir:CodeSystem.status [ fhir:value "active"]; # + fhir:CodeSystem.experimental [ fhir:value "false"^^xsd:boolean]; # + fhir:CodeSystem.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:CodeSystem.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -37,9 +37,9 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:CodeSystem.description [ fhir:value "Data Types for NCPI Research"]; - fhir:CodeSystem.content [ fhir:value "fragment"]; + ]; # + fhir:CodeSystem.description [ fhir:value "Data Types for NCPI Research"]; # + fhir:CodeSystem.content [ fhir:value "fragment"]; # fhir:CodeSystem.concept [ fhir:index 0; fhir:CodeSystem.concept.code [ fhir:value "Exome" ]; @@ -52,7 +52,7 @@ fhir:index 2; fhir:CodeSystem.concept.code [ fhir:value "GWAS" ]; fhir:CodeSystem.concept.display [ fhir:value "Genome-Wide Association Studies" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/CodeSystem-ncpi-data-types.ttl.html b/CodeSystem-ncpi-data-types.ttl.html index 3a560047..0d30c350 100644 --- a/CodeSystem-ncpi-data-types.ttl.html +++ b/CodeSystem-ncpi-data-types.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Data Types for NCPI Research - TTL Representation</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,19 +294,19 @@ <h2 id="root">: Data Types for NCPI Research - TTL Representation</h2> a fhir:CodeSystem; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-data-types"]; + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-data-types"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">Exome<a name=\"ncpi-data-types-Exome\"> </a></td><td>Exome Sequence Data</td></tr><tr><td style=\"white-space:nowrap\">WholeGenome<a name=\"ncpi-data-types-WholeGenome\"> </a></td><td>Whole Genome Sequence Data</td></tr><tr><td style=\"white-space:nowrap\">GWAS<a name=\"ncpi-data-types-GWAS\"> </a></td><td>Genome-Wide Association Studies</td></tr></table></div>" - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NcpiDataTypes"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Data Types for NCPI Research"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">fhir:CodeSystem.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NcpiDataTypes"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Data Types for NCPI Research"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">fhir:CodeSystem.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">fhir:CodeSystem.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -322,9 +322,9 @@ <h2 id="root">: Data Types for NCPI Research - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Data Types for NCPI Research"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "fragment"]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Data Types for NCPI Research"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "fragment"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept">fhir:CodeSystem.concept</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "Exome" ]; @@ -337,7 +337,7 @@ <h2 id="root">: Data Types for NCPI Research - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 2; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "GWAS" ]; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.display">fhir:CodeSystem.concept.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Genome-Wide Association Studies" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -375,7 +375,7 @@ <h2 id="root">: Data Types for NCPI Research - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-ncpi-data-types.xlsx b/CodeSystem-ncpi-data-types.xlsx index e30564cb..0974c6fd 100644 Binary files a/CodeSystem-ncpi-data-types.xlsx and b/CodeSystem-ncpi-data-types.xlsx differ diff --git a/CodeSystem-ncpi-data-types.xml b/CodeSystem-ncpi-data-types.xml index a8290f5e..5017f062 100644 --- a/CodeSystem-ncpi-data-types.xml +++ b/CodeSystem-ncpi-data-types.xml @@ -11,7 +11,7 @@ <title value="Data Types for NCPI Research"/> <status value="active"/> <experimental value="false"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/CodeSystem-ncpi-data-types.xml.html b/CodeSystem-ncpi-data-types.xml.html index 20bd00aa..f63f83ed 100644 --- a/CodeSystem-ncpi-data-types.xml.html +++ b/CodeSystem-ncpi-data-types.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Data Types for NCPI Research - XML Representation</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -299,7 +299,7 @@ <h2 id="root">: Data Types for NCPI Research - XML Representation</h2> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Data Types for NCPI Research"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="active"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">experimental</a> <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">value</a>="false"/> - <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -360,7 +360,7 @@ <h2 id="root">: Data Types for NCPI Research - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-ncpi-testing.html b/CodeSystem-ncpi-testing.html index af245c8e..42a693b6 100644 --- a/CodeSystem-ncpi-testing.html +++ b/CodeSystem-ncpi-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">CodeSystem: NCPI FHIR Codes - Testing Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">CodeSystem: NCPI FHIR Codes - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-ncpi.change.history.html b/CodeSystem-ncpi.change.history.html index 7c50c6cd..be8a788d 100644 --- a/CodeSystem-ncpi.change.history.html +++ b/CodeSystem-ncpi.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Ncpi - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-ncpi.html b/CodeSystem-ncpi.html index a88f611b..59583e61 100644 --- a/CodeSystem-ncpi.html +++ b/CodeSystem-ncpi.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -281,7 +281,7 @@ <h2 id="root">CodeSystem: NCPI FHIR Codes Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -349,7 +349,7 @@ <h2 id="root">CodeSystem: NCPI FHIR Codes <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-ncpi.json b/CodeSystem-ncpi.json index 9a56ba81..18868d2b 100644 --- a/CodeSystem-ncpi.json +++ b/CodeSystem-ncpi.json @@ -1,113 +1,105 @@ -{ - "resourceType": "CodeSystem", - "id": "ncpi", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">Consortium<a name=\"ncpi-Consortium\"> </a></td><td>Study Consortium</td></tr><tr><td style=\"white-space:nowrap\">StudyCohort<a name=\"ncpi-StudyCohort\"> </a></td><td>Study Cohort</td></tr><tr><td style=\"white-space:nowrap\">ConsentGroup<a name=\"ncpi-ConsentGroup\"> </a></td><td>Study Consent Group</td></tr><tr><td style=\"white-space:nowrap\">Summary<a name=\"ncpi-Summary\"> </a></td><td>Summary Data</td></tr><tr><td style=\"white-space:nowrap\">CohortCount<a name=\"ncpi-CohortCount\"> </a></td><td>Number of cohorts that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">SubStudyCount<a name=\"ncpi-SubStudyCount\"> </a></td><td>Number of sub-studies that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">SampleCount<a name=\"ncpi-SampleCount\"> </a></td><td>Number of samples that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">Participant<a name=\"ncpi-Participant\"> </a></td><td>Number of participants that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">VariableCount<a name=\"ncpi-VariableCount\"> </a></td><td>Number of variables that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">AnalysesCount<a name=\"ncpi-AnalysesCount\"> </a></td><td>Number of analyses that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">MolecularDatasetCount<a name=\"ncpi-MolecularDatasetCount\"> </a></td><td>Number of molecular datasets that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">PhenotypeDatasetCount<a name=\"ncpi-PhenotypeDatasetCount\"> </a></td><td>Number of phenotype datasets that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">StorageSize<a name=\"ncpi-StorageSize\"> </a></td><td>Size on Disk</td></tr><tr><td style=\"white-space:nowrap\">ConsentCodes<a name=\"ncpi-ConsentCodes\"> </a></td><td>Consent Codes</td></tr><tr><td style=\"white-space:nowrap\">TerraWorkspace<a name=\"ncpi-TerraWorkspace\"> </a></td><td>Terra Workspace Name</td></tr><tr><td style=\"white-space:nowrap\">PrimaryDisease<a name=\"ncpi-PrimaryDisease\"> </a></td><td>Primary Disease</td></tr><tr><td style=\"white-space:nowrap\">AccessType<a name=\"ncpi-AccessType\"> </a></td><td>Access Type</td></tr><tr><td style=\"white-space:nowrap\">StudyDesign<a name=\"ncpi-StudyDesign\"> </a></td><td>Study Design</td></tr></table></div>" - }, - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", - "version": "0.2.0", - "name": "Ncpi", - "title": "NCPI FHIR Codes", - "status": "active", - "experimental": false, - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "Codes that would apply to NCPI projects", - "content": "fragment", - "concept": [ - { - "code": "Consortium", - "display": "Study Consortium" - }, - { - "code": "StudyCohort", - "display": "Study Cohort" - }, - { - "code": "ConsentGroup", - "display": "Study Consent Group" - }, - { - "code": "Summary", - "display": "Summary Data" - }, - { - "code": "CohortCount", - "display": "Number of cohorts that are part of this study" - }, - { - "code": "SubStudyCount", - "display": "Number of sub-studies that are part of this study" - }, - { - "code": "SampleCount", - "display": "Number of samples that are part of this study" - }, - { - "code": "Participant", - "display": "Number of participants that are part of this study" - }, - { - "code": "VariableCount", - "display": "Number of variables that are part of this study" - }, - { - "code": "AnalysesCount", - "display": "Number of analyses that are part of this study" - }, - { - "code": "MolecularDatasetCount", - "display": "Number of molecular datasets that are part of this study" - }, - { - "code": "PhenotypeDatasetCount", - "display": "Number of phenotype datasets that are part of this study" - }, - { - "code": "StorageSize", - "display": "Size on Disk" - }, - { - "code": "ConsentCodes", - "display": "Consent Codes" - }, - { - "code": "TerraWorkspace", - "display": "Terra Workspace Name" - }, - { - "code": "PrimaryDisease", - "display": "Primary Disease" - }, - { - "code": "AccessType", - "display": "Access Type" - }, - { - "code": "StudyDesign", - "display": "Study Design" - } - ] +{ + "resourceType" : "CodeSystem", + "id" : "ncpi", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">Consortium<a name=\"ncpi-Consortium\"> </a></td><td>Study Consortium</td></tr><tr><td style=\"white-space:nowrap\">StudyCohort<a name=\"ncpi-StudyCohort\"> </a></td><td>Study Cohort</td></tr><tr><td style=\"white-space:nowrap\">ConsentGroup<a name=\"ncpi-ConsentGroup\"> </a></td><td>Study Consent Group</td></tr><tr><td style=\"white-space:nowrap\">Summary<a name=\"ncpi-Summary\"> </a></td><td>Summary Data</td></tr><tr><td style=\"white-space:nowrap\">CohortCount<a name=\"ncpi-CohortCount\"> </a></td><td>Number of cohorts that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">SubStudyCount<a name=\"ncpi-SubStudyCount\"> </a></td><td>Number of sub-studies that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">SampleCount<a name=\"ncpi-SampleCount\"> </a></td><td>Number of samples that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">Participant<a name=\"ncpi-Participant\"> </a></td><td>Number of participants that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">VariableCount<a name=\"ncpi-VariableCount\"> </a></td><td>Number of variables that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">AnalysesCount<a name=\"ncpi-AnalysesCount\"> </a></td><td>Number of analyses that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">MolecularDatasetCount<a name=\"ncpi-MolecularDatasetCount\"> </a></td><td>Number of molecular datasets that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">PhenotypeDatasetCount<a name=\"ncpi-PhenotypeDatasetCount\"> </a></td><td>Number of phenotype datasets that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">StorageSize<a name=\"ncpi-StorageSize\"> </a></td><td>Size on Disk</td></tr><tr><td style=\"white-space:nowrap\">ConsentCodes<a name=\"ncpi-ConsentCodes\"> </a></td><td>Consent Codes</td></tr><tr><td style=\"white-space:nowrap\">TerraWorkspace<a name=\"ncpi-TerraWorkspace\"> </a></td><td>Terra Workspace Name</td></tr><tr><td style=\"white-space:nowrap\">PrimaryDisease<a name=\"ncpi-PrimaryDisease\"> </a></td><td>Primary Disease</td></tr><tr><td style=\"white-space:nowrap\">AccessType<a name=\"ncpi-AccessType\"> </a></td><td>Access Type</td></tr><tr><td style=\"white-space:nowrap\">StudyDesign<a name=\"ncpi-StudyDesign\"> </a></td><td>Study Design</td></tr></table></div>" + }, + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", + "version" : "0.2.0", + "name" : "Ncpi", + "title" : "NCPI FHIR Codes", + "status" : "active", + "experimental" : false, + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "Codes that would apply to NCPI projects", + "content" : "fragment", + "concept" : [{ + "code" : "Consortium", + "display" : "Study Consortium" + }, + { + "code" : "StudyCohort", + "display" : "Study Cohort" + }, + { + "code" : "ConsentGroup", + "display" : "Study Consent Group" + }, + { + "code" : "Summary", + "display" : "Summary Data" + }, + { + "code" : "CohortCount", + "display" : "Number of cohorts that are part of this study" + }, + { + "code" : "SubStudyCount", + "display" : "Number of sub-studies that are part of this study" + }, + { + "code" : "SampleCount", + "display" : "Number of samples that are part of this study" + }, + { + "code" : "Participant", + "display" : "Number of participants that are part of this study" + }, + { + "code" : "VariableCount", + "display" : "Number of variables that are part of this study" + }, + { + "code" : "AnalysesCount", + "display" : "Number of analyses that are part of this study" + }, + { + "code" : "MolecularDatasetCount", + "display" : "Number of molecular datasets that are part of this study" + }, + { + "code" : "PhenotypeDatasetCount", + "display" : "Number of phenotype datasets that are part of this study" + }, + { + "code" : "StorageSize", + "display" : "Size on Disk" + }, + { + "code" : "ConsentCodes", + "display" : "Consent Codes" + }, + { + "code" : "TerraWorkspace", + "display" : "Terra Workspace Name" + }, + { + "code" : "PrimaryDisease", + "display" : "Primary Disease" + }, + { + "code" : "AccessType", + "display" : "Access Type" + }, + { + "code" : "StudyDesign", + "display" : "Study Design" + }] } \ No newline at end of file diff --git a/CodeSystem-ncpi.json.html b/CodeSystem-ncpi.json.html index f4d8b5e0..b07f5416 100644 --- a/CodeSystem-ncpi.json.html +++ b/CodeSystem-ncpi.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: NCPI FHIR Codes - JSON Representation</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: NCPI FHIR Codes - JSON Representation</h2> "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a>" : "NCPI FHIR Codes", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a>" : "active", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">experimental</a>" : false, - "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>" : [ { @@ -427,7 +427,7 @@ <h2 id="root">: NCPI FHIR Codes - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-ncpi.ttl b/CodeSystem-ncpi.ttl index f08edd55..a492431a 100644 --- a/CodeSystem-ncpi.ttl +++ b/CodeSystem-ncpi.ttl @@ -7,19 +7,19 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi> a fhir:CodeSystem; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "ncpi"]; + fhir:Resource.id [ fhir:value "ncpi"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">Consortium<a name=\"ncpi-Consortium\"> </a></td><td>Study Consortium</td></tr><tr><td style=\"white-space:nowrap\">StudyCohort<a name=\"ncpi-StudyCohort\"> </a></td><td>Study Cohort</td></tr><tr><td style=\"white-space:nowrap\">ConsentGroup<a name=\"ncpi-ConsentGroup\"> </a></td><td>Study Consent Group</td></tr><tr><td style=\"white-space:nowrap\">Summary<a name=\"ncpi-Summary\"> </a></td><td>Summary Data</td></tr><tr><td style=\"white-space:nowrap\">CohortCount<a name=\"ncpi-CohortCount\"> </a></td><td>Number of cohorts that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">SubStudyCount<a name=\"ncpi-SubStudyCount\"> </a></td><td>Number of sub-studies that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">SampleCount<a name=\"ncpi-SampleCount\"> </a></td><td>Number of samples that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">Participant<a name=\"ncpi-Participant\"> </a></td><td>Number of participants that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">VariableCount<a name=\"ncpi-VariableCount\"> </a></td><td>Number of variables that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">AnalysesCount<a name=\"ncpi-AnalysesCount\"> </a></td><td>Number of analyses that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">MolecularDatasetCount<a name=\"ncpi-MolecularDatasetCount\"> </a></td><td>Number of molecular datasets that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">PhenotypeDatasetCount<a name=\"ncpi-PhenotypeDatasetCount\"> </a></td><td>Number of phenotype datasets that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">StorageSize<a name=\"ncpi-StorageSize\"> </a></td><td>Size on Disk</td></tr><tr><td style=\"white-space:nowrap\">ConsentCodes<a name=\"ncpi-ConsentCodes\"> </a></td><td>Consent Codes</td></tr><tr><td style=\"white-space:nowrap\">TerraWorkspace<a name=\"ncpi-TerraWorkspace\"> </a></td><td>Terra Workspace Name</td></tr><tr><td style=\"white-space:nowrap\">PrimaryDisease<a name=\"ncpi-PrimaryDisease\"> </a></td><td>Primary Disease</td></tr><tr><td style=\"white-space:nowrap\">AccessType<a name=\"ncpi-AccessType\"> </a></td><td>Access Type</td></tr><tr><td style=\"white-space:nowrap\">StudyDesign<a name=\"ncpi-StudyDesign\"> </a></td><td>Study Design</td></tr></table></div>" - ]; - fhir:CodeSystem.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi"]; - fhir:CodeSystem.version [ fhir:value "0.2.0"]; - fhir:CodeSystem.name [ fhir:value "Ncpi"]; - fhir:CodeSystem.title [ fhir:value "NCPI FHIR Codes"]; - fhir:CodeSystem.status [ fhir:value "active"]; - fhir:CodeSystem.experimental [ fhir:value "false"^^xsd:boolean]; - fhir:CodeSystem.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:CodeSystem.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi"]; # + fhir:CodeSystem.version [ fhir:value "0.2.0"]; # + fhir:CodeSystem.name [ fhir:value "Ncpi"]; # + fhir:CodeSystem.title [ fhir:value "NCPI FHIR Codes"]; # + fhir:CodeSystem.status [ fhir:value "active"]; # + fhir:CodeSystem.experimental [ fhir:value "false"^^xsd:boolean]; # + fhir:CodeSystem.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:CodeSystem.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -37,9 +37,9 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:CodeSystem.description [ fhir:value "Codes that would apply to NCPI projects"]; - fhir:CodeSystem.content [ fhir:value "fragment"]; + ]; # + fhir:CodeSystem.description [ fhir:value "Codes that would apply to NCPI projects"]; # + fhir:CodeSystem.content [ fhir:value "fragment"]; # fhir:CodeSystem.concept [ fhir:index 0; fhir:CodeSystem.concept.code [ fhir:value "Consortium" ]; @@ -112,7 +112,7 @@ fhir:index 17; fhir:CodeSystem.concept.code [ fhir:value "StudyDesign" ]; fhir:CodeSystem.concept.display [ fhir:value "Study Design" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/CodeSystem-ncpi.ttl.html b/CodeSystem-ncpi.ttl.html index ad49e46f..87e6e6ef 100644 --- a/CodeSystem-ncpi.ttl.html +++ b/CodeSystem-ncpi.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: NCPI FHIR Codes - TTL Representation</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,19 +294,19 @@ <h2 id="root">: NCPI FHIR Codes - TTL Representation</h2> a fhir:CodeSystem; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi"]; + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">Consortium<a name=\"ncpi-Consortium\"> </a></td><td>Study Consortium</td></tr><tr><td style=\"white-space:nowrap\">StudyCohort<a name=\"ncpi-StudyCohort\"> </a></td><td>Study Cohort</td></tr><tr><td style=\"white-space:nowrap\">ConsentGroup<a name=\"ncpi-ConsentGroup\"> </a></td><td>Study Consent Group</td></tr><tr><td style=\"white-space:nowrap\">Summary<a name=\"ncpi-Summary\"> </a></td><td>Summary Data</td></tr><tr><td style=\"white-space:nowrap\">CohortCount<a name=\"ncpi-CohortCount\"> </a></td><td>Number of cohorts that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">SubStudyCount<a name=\"ncpi-SubStudyCount\"> </a></td><td>Number of sub-studies that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">SampleCount<a name=\"ncpi-SampleCount\"> </a></td><td>Number of samples that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">Participant<a name=\"ncpi-Participant\"> </a></td><td>Number of participants that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">VariableCount<a name=\"ncpi-VariableCount\"> </a></td><td>Number of variables that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">AnalysesCount<a name=\"ncpi-AnalysesCount\"> </a></td><td>Number of analyses that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">MolecularDatasetCount<a name=\"ncpi-MolecularDatasetCount\"> </a></td><td>Number of molecular datasets that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">PhenotypeDatasetCount<a name=\"ncpi-PhenotypeDatasetCount\"> </a></td><td>Number of phenotype datasets that are part of this study</td></tr><tr><td style=\"white-space:nowrap\">StorageSize<a name=\"ncpi-StorageSize\"> </a></td><td>Size on Disk</td></tr><tr><td style=\"white-space:nowrap\">ConsentCodes<a name=\"ncpi-ConsentCodes\"> </a></td><td>Consent Codes</td></tr><tr><td style=\"white-space:nowrap\">TerraWorkspace<a name=\"ncpi-TerraWorkspace\"> </a></td><td>Terra Workspace Name</td></tr><tr><td style=\"white-space:nowrap\">PrimaryDisease<a name=\"ncpi-PrimaryDisease\"> </a></td><td>Primary Disease</td></tr><tr><td style=\"white-space:nowrap\">AccessType<a name=\"ncpi-AccessType\"> </a></td><td>Access Type</td></tr><tr><td style=\"white-space:nowrap\">StudyDesign<a name=\"ncpi-StudyDesign\"> </a></td><td>Study Design</td></tr></table></div>" - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Ncpi"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Codes"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">fhir:CodeSystem.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Ncpi"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Codes"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">fhir:CodeSystem.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">fhir:CodeSystem.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -322,9 +322,9 @@ <h2 id="root">: NCPI FHIR Codes - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Codes that would apply to NCPI projects"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "fragment"]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Codes that would apply to NCPI projects"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "fragment"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept">fhir:CodeSystem.concept</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "Consortium" ]; @@ -397,7 +397,7 @@ <h2 id="root">: NCPI FHIR Codes - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 17; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "StudyDesign" ]; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.display">fhir:CodeSystem.concept.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Study Design" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -435,7 +435,7 @@ <h2 id="root">: NCPI FHIR Codes - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-ncpi.xlsx b/CodeSystem-ncpi.xlsx index 7d5f1c85..ffb61058 100644 Binary files a/CodeSystem-ncpi.xlsx and b/CodeSystem-ncpi.xlsx differ diff --git a/CodeSystem-ncpi.xml b/CodeSystem-ncpi.xml index 2847589d..e744e9a1 100644 --- a/CodeSystem-ncpi.xml +++ b/CodeSystem-ncpi.xml @@ -11,7 +11,7 @@ <title value="NCPI FHIR Codes"/> <status value="active"/> <experimental value="false"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/CodeSystem-ncpi.xml.html b/CodeSystem-ncpi.xml.html index 51f05c87..baee2d02 100644 --- a/CodeSystem-ncpi.xml.html +++ b/CodeSystem-ncpi.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: NCPI FHIR Codes - XML Representation</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: NCPI FHIR Codes - XML Representation</h2> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Codes"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="active"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">experimental</a> <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">value</a>="false"/> - <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -421,7 +421,7 @@ <h2 id="root">: NCPI FHIR Codes - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-omim-testing.html b/CodeSystem-omim-testing.html index ef476c40..9a1d64fb 100644 --- a/CodeSystem-omim-testing.html +++ b/CodeSystem-omim-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">CodeSystem: Online Mendelian Inheritance in Man - Testing Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">CodeSystem: Online Mendelian Inheritance in Man - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-omim.change.history.html b/CodeSystem-omim.change.history.html index 19ddc00d..06dad8d6 100644 --- a/CodeSystem-omim.change.history.html +++ b/CodeSystem-omim.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: OMIM - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-omim.html b/CodeSystem-omim.html index 2a44d1c9..0277acb6 100644 --- a/CodeSystem-omim.html +++ b/CodeSystem-omim.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -281,7 +281,7 @@ <h2 id="root">CodeSystem: Online Mendelian Inheritance in Man Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -349,7 +349,7 @@ <h2 id="root">CodeSystem: Online Mendelian Inheritance in Man <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-omim.json b/CodeSystem-omim.json index 67de7131..a59450b2 100644 --- a/CodeSystem-omim.json +++ b/CodeSystem-omim.json @@ -1,2035 +1,2027 @@ -{ - "resourceType": "CodeSystem", - "id": "omim", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://omim.org/</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">OMIM:613801<a name=\"omim-OMIM.58613801\"> </a></td><td>Retinitis pigmentosa-40</td></tr><tr><td style=\"white-space:nowrap\">OMIM:213300<a name=\"omim-OMIM.58213300\"> </a></td><td>Joubert syndrome 1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615780<a name=\"omim-OMIM.58615780\"> </a></td><td>Retinitis pigmentosa 69</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613826<a name=\"omim-OMIM.58613826\"> </a></td><td>Leber congenital amaurosis 6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:310200<a name=\"omim-OMIM.58310200\"> </a></td><td>Duchenne muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617194<a name=\"omim-OMIM.58617194\"> </a></td><td>Lethal congenital contracture syndrome 11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:105400<a name=\"omim-OMIM.58105400\"> </a></td><td>AMYOTROPHIC LATERAL SCLEROSIS 1; ALS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:108120<a name=\"omim-OMIM.58108120\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, TYPE 1A; DA1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:114300<a name=\"omim-OMIM.58114300\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, TYPE 3; DA3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:115195<a name=\"omim-OMIM.58115195\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 2; CMH2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:115196<a name=\"omim-OMIM.58115196\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 3; CMH3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:115197<a name=\"omim-OMIM.58115197\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 4; CMH4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:115200<a name=\"omim-OMIM.58115200\"> </a></td><td>CARDIOMYOPATHY, DILATED, 1A; CMD1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:117000<a name=\"omim-OMIM.58117000\"> </a></td><td>CENTRAL CORE DISEASE OF MUSCLE; CCD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:117360<a name=\"omim-OMIM.58117360\"> </a></td><td>SPINOCEREBELLAR ATAXIA 29; SCA29</td></tr><tr><td style=\"white-space:nowrap\">OMIM:119530<a name=\"omim-OMIM.58119530\"> </a></td><td>OROFACIAL CLEFT 1; OFC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:122470<a name=\"omim-OMIM.58122470\"> </a></td><td>CORNELIA DE LANGE SYNDROME 1; CDLS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:130600<a name=\"omim-OMIM.58130600\"> </a></td><td>ELLIPTOCYTOSIS 2; EL2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:135900<a name=\"omim-OMIM.58135900\"> </a></td><td>COFFIN-SIRIS SYNDROME 1; CSS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:136140<a name=\"omim-OMIM.58136140\"> </a></td><td>FLOATING-HARBOR SYNDROME; FLHS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:137920<a name=\"omim-OMIM.58137920\"> </a></td><td>RENAL CYSTS AND DIABETES SYNDROME; RCAD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:139090<a name=\"omim-OMIM.58139090\"> </a></td><td>GRAY PLATELET SYNDROME; GPS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:139210<a name=\"omim-OMIM.58139210\"> </a></td><td>MYHRE SYNDROME; MYHRS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:143095<a name=\"omim-OMIM.58143095\"> </a></td><td>SPONDYLOEPIPHYSEAL DYSPLASIA WITH CONGENITAL JOINT DISLOCATIONS; SEDCJD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:143465<a name=\"omim-OMIM.58143465\"> </a></td><td>ATTENTION DEFICIT-HYPERACTIVITY DISORDER; ADHD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:147891<a name=\"omim-OMIM.58147891\"> </a></td><td>ISCHIOCOXOPODOPATELLAR SYNDROME WITH OR WITHOUT PULMONARY ARTERIAL HYPERTENSION; ICPPS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:147920<a name=\"omim-OMIM.58147920\"> </a></td><td>KABUKI SYNDROME 1; KABUK1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:148050<a name=\"omim-OMIM.58148050\"> </a></td><td>KBG SYNDROME; KBGS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:149400<a name=\"omim-OMIM.58149400\"> </a></td><td>HYPEREKPLEXIA 1; HKPX1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:152950<a name=\"omim-OMIM.58152950\"> </a></td><td>MICROCEPHALY WITH OR WITHOUT CHORIORETINOPATHY, LYMPHEDEMA, OR MENTAL RETARDATION; MCLMR</td></tr><tr><td style=\"white-space:nowrap\">OMIM:153670<a name=\"omim-OMIM.58153670\"> </a></td><td>BERNARD-SOULIER SYNDROME, TYPE A2, AUTOSOMAL DOMINANT; BSSA2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:154400<a name=\"omim-OMIM.58154400\"> </a></td><td>ACROFACIAL DYSOSTOSIS 1, NAGER TYPE; AFD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:154700<a name=\"omim-OMIM.58154700\"> </a></td><td>MARFAN SYNDROME; MFS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:155310<a name=\"omim-OMIM.58155310\"> </a></td><td>VISCERAL MYOPATHY; VSCM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:158590<a name=\"omim-OMIM.58158590\"> </a></td><td>NEURONOPATHY, DISTAL HEREDITARY MOTOR, TYPE IIA; HMN2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:158810<a name=\"omim-OMIM.58158810\"> </a></td><td>BETHLEM MYOPATHY 1; BTHLM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:159550<a name=\"omim-OMIM.58159550\"> </a></td><td>ATAXIA-PANCYTOPENIA SYNDROME; ATXPC</td></tr><tr><td style=\"white-space:nowrap\">OMIM:160150<a name=\"omim-OMIM.58160150\"> </a></td><td>MYOPATHY, CENTRONUCLEAR, 1; CNM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:160500<a name=\"omim-OMIM.58160500\"> </a></td><td>MYOPATHY, DISTAL, 1; MPD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:160800<a name=\"omim-OMIM.58160800\"> </a></td><td>MYOTONIA CONGENITA, AUTOSOMAL DOMINANT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:160900<a name=\"omim-OMIM.58160900\"> </a></td><td>MYOTONIC DYSTROPHY 1; DM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:161800<a name=\"omim-OMIM.58161800\"> </a></td><td>NEMALINE MYOPATHY 3; NEM3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:163950<a name=\"omim-OMIM.58163950\"> </a></td><td>NOONAN SYNDROME 1; NS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:178110<a name=\"omim-OMIM.58178110\"> </a></td><td>CONTRACTURES, PTERYGIA, AND SPONDYLOCARPOTARSAL FUSION SYNDROME 1A; CPSFS1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:178500<a name=\"omim-OMIM.58178500\"> </a></td><td>PULMONARY FIBROSIS, IDIOPATHIC; IPF</td></tr><tr><td style=\"white-space:nowrap\">OMIM:180100<a name=\"omim-OMIM.58180100\"> </a></td><td>RETINITIS PIGMENTOSA 1; RP1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:180849<a name=\"omim-OMIM.58180849\"> </a></td><td>RUBINSTEIN-TAYBI SYNDROME 1; RSTS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:181430<a name=\"omim-OMIM.58181430\"> </a></td><td>SCAPULOPERONEAL MYOPATHY, MYH7-RELATED; SPMM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:182601<a name=\"omim-OMIM.58182601\"> </a></td><td>SPASTIC PARAPLEGIA 4, AUTOSOMAL DOMINANT; SPG4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:188000<a name=\"omim-OMIM.58188000\"> </a></td><td>THROMBOCYTOPENIA 2; THC2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:191480<a name=\"omim-OMIM.58191480\"> </a></td><td>UNCOMBABLE HAIR SYNDROME 1; UHS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:203800<a name=\"omim-OMIM.58203800\"> </a></td><td>ALSTROM SYNDROME; ALMS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:204200<a name=\"omim-OMIM.58204200\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 3; CLN3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:204500<a name=\"omim-OMIM.58204500\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 2; CLN2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:205100<a name=\"omim-OMIM.58205100\"> </a></td><td>AMYOTROPHIC LATERAL SCLEROSIS 2, JUVENILE; ALS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:206900<a name=\"omim-OMIM.58206900\"> </a></td><td>MICROPHTHALMIA, SYNDROMIC 3; MCOPS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:208900<a name=\"omim-OMIM.58208900\"> </a></td><td>ATAXIA-TELANGIECTASIA; AT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:209850<a name=\"omim-OMIM.58209850\"> </a></td><td>AUTISM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:209900<a name=\"omim-OMIM.58209900\"> </a></td><td>BARDET-BIEDL SYNDROME 1; BBS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:210000<a name=\"omim-OMIM.58210000\"> </a></td><td>BEHR SYNDROME; BEHRS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:210720<a name=\"omim-OMIM.58210720\"> </a></td><td>MICROCEPHALIC OSTEODYSPLASTIC PRIMORDIAL DWARFISM, TYPE II; MOPD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:210900<a name=\"omim-OMIM.58210900\"> </a></td><td>BLOOM SYNDROME; BLM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:212065<a name=\"omim-OMIM.58212065\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ia; CDG1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:212066<a name=\"omim-OMIM.58212066\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIa; CDG2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:214500<a name=\"omim-OMIM.58214500\"> </a></td><td>CHEDIAK-HIGASHI SYNDROME; CHS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:214800<a name=\"omim-OMIM.58214800\"> </a></td><td>CHARGE SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:215500<a name=\"omim-OMIM.58215500\"> </a></td><td>CHOROIDAL DYSTROPHY, CENTRAL AREOLAR, 1; CACD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:216400<a name=\"omim-OMIM.58216400\"> </a></td><td>COCKAYNE SYNDROME A; CSA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:216550<a name=\"omim-OMIM.58216550\"> </a></td><td>COHEN SYNDROME; COH1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:217080<a name=\"omim-OMIM.58217080\"> </a></td><td>JALILI SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:217980<a name=\"omim-OMIM.58217980\"> </a></td><td>CORPUS CALLOSUM, AGENESIS OF, WITH FACIAL ANOMALIES AND ROBIN SEQUENCE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:218340<a name=\"omim-OMIM.58218340\"> </a></td><td>TEMTAMY SYNDROME; TEMTYS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:219200<a name=\"omim-OMIM.58219200\"> </a></td><td>CUTIS LAXA, AUTOSOMAL RECESSIVE, TYPE IIA; ARCL2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:224050<a name=\"omim-OMIM.58224050\"> </a></td><td>CEREBELLAR ATAXIA, MENTAL RETARDATION, AND DYSEQUILIBRIUM SYNDROME 1; CAMRQ1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:224690<a name=\"omim-OMIM.58224690\"> </a></td><td>MEIER-GORLIN SYNDROME 1; MGORS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:225753<a name=\"omim-OMIM.58225753\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 4; PCH4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:225790<a name=\"omim-OMIM.58225790\"> </a></td><td>PROLIFERATIVE VASCULOPATHY AND HYDRANENCEPHALY-HYDROCEPHALY SYNDROME; PVHH</td></tr><tr><td style=\"white-space:nowrap\">OMIM:227650<a name=\"omim-OMIM.58227650\"> </a></td><td>FANCONI ANEMIA, COMPLEMENTATION GROUP A; FANCA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:229600<a name=\"omim-OMIM.58229600\"> </a></td><td>FRUCTOSE INTOLERANCE, HEREDITARY; HFI</td></tr><tr><td style=\"white-space:nowrap\">OMIM:230000<a name=\"omim-OMIM.58230000\"> </a></td><td>FUCOSIDOSIS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:230500<a name=\"omim-OMIM.58230500\"> </a></td><td>GM1-GANGLIOSIDOSIS, TYPE I</td></tr><tr><td style=\"white-space:nowrap\">OMIM:232300<a name=\"omim-OMIM.58232300\"> </a></td><td>GLYCOGEN STORAGE DISEASE II; GSD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:232600<a name=\"omim-OMIM.58232600\"> </a></td><td>GLYCOGEN STORAGE DISEASE V; GSD5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:234200<a name=\"omim-OMIM.58234200\"> </a></td><td>NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 1; NBIA1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:234500<a name=\"omim-OMIM.58234500\"> </a></td><td>HARTNUP DISORDER; HND</td></tr><tr><td style=\"white-space:nowrap\">OMIM:236000<a name=\"omim-OMIM.58236000\"> </a></td><td>LYMPHOMA, HODGKIN, CLASSIC; CHL</td></tr><tr><td style=\"white-space:nowrap\">OMIM:236600<a name=\"omim-OMIM.58236600\"> </a></td><td>HYDROCEPHALUS, CONGENITAL, 1; HYC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:236792<a name=\"omim-OMIM.58236792\"> </a></td><td>L-2-HYDROXYGLUTARIC ACIDURIA; L2HGA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:243310<a name=\"omim-OMIM.58243310\"> </a></td><td>BARAITSER-WINTER SYNDROME 1; BRWS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:244450<a name=\"omim-OMIM.58244450\"> </a></td><td>KAUFMAN OCULOCEREBROFACIAL SYNDROME; KOS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:245200<a name=\"omim-OMIM.58245200\"> </a></td><td>KRABBE DISEASE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:245359<a name=\"omim-OMIM.58245359\"> </a></td><td>missing</td></tr><tr><td style=\"white-space:nowrap\">OMIM:248200<a name=\"omim-OMIM.58248200\"> </a></td><td>STARGARDT DISEASE 1; STGD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:248700<a name=\"omim-OMIM.58248700\"> </a></td><td>MARDEN-WALKER SYNDROME; MWKS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:249000<a name=\"omim-OMIM.58249000\"> </a></td><td>MECKEL SYNDROME, TYPE 1; MKS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:249900<a name=\"omim-OMIM.58249900\"> </a></td><td>METACHROMATIC LEUKODYSTROPHY DUE TO SAPOSIN B DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:250100<a name=\"omim-OMIM.58250100\"> </a></td><td>METACHROMATIC LEUKODYSTROPHY; MLD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:250620<a name=\"omim-OMIM.58250620\"> </a></td><td>3-HYDROXYISOBUTYRYL-CoA HYDROLASE DEFICIENCY; HIBCHD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251200<a name=\"omim-OMIM.58251200\"> </a></td><td>MICROCEPHALY 1, PRIMARY, AUTOSOMAL RECESSIVE; MCPH1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251260<a name=\"omim-OMIM.58251260\"> </a></td><td>NIJMEGEN BREAKAGE SYNDROME; NBS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251280<a name=\"omim-OMIM.58251280\"> </a></td><td>DIENCEPHALIC-MESENCEPHALIC JUNCTION DYSPLASIA SYNDROME 1; DMJDS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251290<a name=\"omim-OMIM.58251290\"> </a></td><td>PSEUDO-TORCH SYNDROME 1; PTORCH1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251300<a name=\"omim-OMIM.58251300\"> </a></td><td>GALLOWAY-MOWAT SYNDROME 1; GAMOS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:252010<a name=\"omim-OMIM.58252010\"> </a></td><td>MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 1; MC1DN1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:252160<a name=\"omim-OMIM.58252160\"> </a></td><td>MOLYBDENUM COFACTOR DEFICIENCY, COMPLEMENTATION GROUP B; MOCODB</td></tr><tr><td style=\"white-space:nowrap\">OMIM:252920<a name=\"omim-OMIM.58252920\"> </a></td><td>MUCOPOLYSACCHARIDOSIS, TYPE IIIB; MPS3B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:253250<a name=\"omim-OMIM.58253250\"> </a></td><td>MULIBREY NANISM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:253600<a name=\"omim-OMIM.58253600\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 1; LGMDR1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:253601<a name=\"omim-OMIM.58253601\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 2; LGMDR2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:253700<a name=\"omim-OMIM.58253700\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 5; LGMDR5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254090<a name=\"omim-OMIM.58254090\"> </a></td><td>ULLRICH CONGENITAL MUSCULAR DYSTROPHY 1; UCMD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254110<a name=\"omim-OMIM.58254110\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 8; LGMDR8</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254300<a name=\"omim-OMIM.58254300\"> </a></td><td>MYASTHENIC SYNDROME, CONGENITAL, 10; CMS10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254780<a name=\"omim-OMIM.58254780\"> </a></td><td>MYOCLONIC EPILEPSY OF LAFORA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254940<a name=\"omim-OMIM.58254940\"> </a></td><td>CAREY-FINEMAN-ZITER SYNDROME; CFZS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:255310<a name=\"omim-OMIM.58255310\"> </a></td><td>MYOPATHY, CONGENITAL, WITH FIBER-TYPE DISPROPORTION; CFTD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:255320<a name=\"omim-OMIM.58255320\"> </a></td><td>MINICORE MYOPATHY WITH EXTERNAL OPHTHALMOPLEGIA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:255800<a name=\"omim-OMIM.58255800\"> </a></td><td>SCHWARTZ-JAMPEL SYNDROME, TYPE 1; SJS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256000<a name=\"omim-OMIM.58256000\"> </a></td><td>LEIGH SYNDROME; LS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256300<a name=\"omim-OMIM.58256300\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 1; NPHS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256600<a name=\"omim-OMIM.58256600\"> </a></td><td>NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 2A; NBIA2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256700<a name=\"omim-OMIM.58256700\"> </a></td><td>NEUROBLASTOMA, SUSCEPTIBILITY TO, 1; NBLST1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256730<a name=\"omim-OMIM.58256730\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 1; CLN1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256731<a name=\"omim-OMIM.58256731\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 5; CLN5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256800<a name=\"omim-OMIM.58256800\"> </a></td><td>INSENSITIVITY TO PAIN, CONGENITAL, WITH ANHIDROSIS; CIPA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256850<a name=\"omim-OMIM.58256850\"> </a></td><td>GIANT AXONAL NEUROPATHY 1, AUTOSOMAL RECESSIVE; GAN1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:257220<a name=\"omim-OMIM.58257220\"> </a></td><td>NIEMANN-PICK DISEASE, TYPE C1; NPC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:257320<a name=\"omim-OMIM.58257320\"> </a></td><td>LISSENCEPHALY 2; LIS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:260400<a name=\"omim-OMIM.58260400\"> </a></td><td>SHWACHMAN-DIAMOND SYNDROME 1; SDS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:260565<a name=\"omim-OMIM.58260565\"> </a></td><td>PEHO SYNDROME; PEHO</td></tr><tr><td style=\"white-space:nowrap\">OMIM:261630<a name=\"omim-OMIM.58261630\"> </a></td><td>HYPERPHENYLALANINEMIA, BH4-DEFICIENT, C; HPABH4C</td></tr><tr><td style=\"white-space:nowrap\">OMIM:262500<a name=\"omim-OMIM.58262500\"> </a></td><td>LARON SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:263200<a name=\"omim-OMIM.58263200\"> </a></td><td>POLYCYSTIC KIDNEY DISEASE 4 WITH OR WITHOUT POLYCYSTIC LIVER DISEASE; PKD4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:265000<a name=\"omim-OMIM.58265000\"> </a></td><td>MULTIPLE PTERYGIUM SYNDROME, ESCOBAR VARIANT; EVMPS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:266100<a name=\"omim-OMIM.58266100\"> </a></td><td>EPILEPSY, PYRIDOXINE-DEPENDENT; EPD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:266265<a name=\"omim-OMIM.58266265\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIc; CDG2C</td></tr><tr><td style=\"white-space:nowrap\">OMIM:266500<a name=\"omim-OMIM.58266500\"> </a></td><td>REFSUM DISEASE, CLASSIC</td></tr><tr><td style=\"white-space:nowrap\">OMIM:266510<a name=\"omim-OMIM.58266510\"> </a></td><td>PEROXISOME BIOGENESIS DISORDER 3B; PBD3B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:268800<a name=\"omim-OMIM.58268800\"> </a></td><td>SANDHOFF DISEASE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:270200<a name=\"omim-OMIM.58270200\"> </a></td><td>SJOGREN-LARSSON SYNDROME; SLS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:270800<a name=\"omim-OMIM.58270800\"> </a></td><td>SPASTIC PARAPLEGIA 5A, AUTOSOMAL RECESSIVE; SPG5A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:271900<a name=\"omim-OMIM.58271900\"> </a></td><td>CANAVAN DISEASE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:272800<a name=\"omim-OMIM.58272800\"> </a></td><td>TAY-SACHS DISEASE; TSD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:273300<a name=\"omim-OMIM.58273300\"> </a></td><td>TESTICULAR GERM CELL TUMOR; TGCT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:274000<a name=\"omim-OMIM.58274000\"> </a></td><td>THROMBOCYTOPENIA-ABSENT RADIUS SYNDROME; TAR</td></tr><tr><td style=\"white-space:nowrap\">OMIM:276901<a name=\"omim-OMIM.58276901\"> </a></td><td>USHER SYNDROME, TYPE IIA; USH2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:277470<a name=\"omim-OMIM.58277470\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 2A; PCH2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300029<a name=\"omim-OMIM.58300029\"> </a></td><td>RETINITIS PIGMENTOSA 3; RP3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300067<a name=\"omim-OMIM.58300067\"> </a></td><td>LISSENCEPHALY, X-LINKED, 1; LISX1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300088<a name=\"omim-OMIM.58300088\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 9; DEE9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300100<a name=\"omim-OMIM.58300100\"> </a></td><td>ADRENOLEUKODYSTROPHY; ALD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300376<a name=\"omim-OMIM.58300376\"> </a></td><td>MUSCULAR DYSTROPHY, BECKER TYPE; BMD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300387<a name=\"omim-OMIM.58300387\"> </a></td><td>MENTAL RETARDATION, X-LINKED 63; MRX63</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300476<a name=\"omim-OMIM.58300476\"> </a></td><td>CONE-ROD DYSTROPHY, X-LINKED, 3; CORDX3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300486<a name=\"omim-OMIM.58300486\"> </a></td><td>MENTAL RETARDATION, X-LINKED, WITH CEREBELLAR HYPOPLASIA AND DISTINCTIVE FACIAL APPEARANCE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300495<a name=\"omim-OMIM.58300495\"> </a></td><td>AUTISM, SUSCEPTIBILITY TO, X-LINKED 2; AUTSX2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300523<a name=\"omim-OMIM.58300523\"> </a></td><td>ALLAN-HERNDON-DUDLEY SYNDROME; AHDS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300534<a name=\"omim-OMIM.58300534\"> </a></td><td>MENTAL RETARDATION, X-LINKED, SYNDROMIC, CLAES-JENSEN TYPE; MRXSCJ</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300695<a name=\"omim-OMIM.58300695\"> </a></td><td>SCAPULOPERONEAL MYOPATHY, X-LINKED DOMINANT; SPM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300749<a name=\"omim-OMIM.58300749\"> </a></td><td>MENTAL RETARDATION AND MICROCEPHALY WITH PONTINE AND CEREBELLAR HYPOPLASIA; MICPCH</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300804<a name=\"omim-OMIM.58300804\"> </a></td><td>JOUBERT SYNDROME 10; JBTS10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300881<a name=\"omim-OMIM.58300881\"> </a></td><td>MOVED TO 615777</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300882<a name=\"omim-OMIM.58300882\"> </a></td><td>CORNELIA DE LANGE SYNDROME 5; CDLS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300894<a name=\"omim-OMIM.58300894\"> </a></td><td>NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 5; NBIA5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300908<a name=\"omim-OMIM.58300908\"> </a></td><td>ANEMIA, NONSPHEROCYTIC HEMOLYTIC, DUE TO G6PD DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300957<a name=\"omim-OMIM.58300957\"> </a></td><td>MENTAL RETARDATION, X-LINKED 12; MRX12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300958<a name=\"omim-OMIM.58300958\"> </a></td><td>INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED, SYNDROMIC, SNIJDERS BLOK TYPE; MRXSSB</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300966<a name=\"omim-OMIM.58300966\"> </a></td><td>MENTAL RETARDATION, X-LINKED, SYNDROMIC 33; MRXS33</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300968<a name=\"omim-OMIM.58300968\"> </a></td><td>MENTAL RETARDATION, X-LINKED 99, SYNDROMIC, FEMALE-RESTRICTED; MRXS99F</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300983<a name=\"omim-OMIM.58300983\"> </a></td><td>MENTAL RETARDATION, X-LINKED 104; MRX104</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300986<a name=\"omim-OMIM.58300986\"> </a></td><td>MENTAL RETARDATION, X-LINKED, SYNDROMIC, BAIN TYPE; MRXSB</td></tr><tr><td style=\"white-space:nowrap\">OMIM:301050<a name=\"omim-OMIM.58301050\"> </a></td><td>ALPORT SYNDROME 1, X-LINKED; ATS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:301310<a name=\"omim-OMIM.58301310\"> </a></td><td>ANEMIA, SIDEROBLASTIC, AND SPINOCEREBELLAR ATAXIA; ASAT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:304340<a name=\"omim-OMIM.58304340\"> </a></td><td>PETTIGREW SYNDROME; PGS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:305100<a name=\"omim-OMIM.58305100\"> </a></td><td>ECTODERMAL DYSPLASIA 1, HYPOHIDROTIC, X-LINKED; XHED</td></tr><tr><td style=\"white-space:nowrap\">OMIM:308350<a name=\"omim-OMIM.58308350\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 1; DEE1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:309500<a name=\"omim-OMIM.58309500\"> </a></td><td>RENPENNING SYNDROME 1; RENS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:309541<a name=\"omim-OMIM.58309541\"> </a></td><td>METHYLMALONIC ACIDEMIA AND HOMOCYSTEINEMIA, cblX TYPE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:309580<a name=\"omim-OMIM.58309580\"> </a></td><td>MENTAL RETARDATION-HYPOTONIC FACIES SYNDROME, X-LINKED, 1; MRXHF1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:310468<a name=\"omim-OMIM.58310468\"> </a></td><td>NEPHROLITHIASIS, X-LINKED RECESSIVE, WITH RENAL FAILURE; XRN</td></tr><tr><td style=\"white-space:nowrap\">OMIM:311070<a name=\"omim-OMIM.58311070\"> </a></td><td>CHARCOT-MARIE-TOOTH DISEASE, X-LINKED RECESSIVE, 5; CMTX5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:313850<a name=\"omim-OMIM.58313850\"> </a></td><td>THORACOABDOMINAL SYNDROME; THAS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:314580<a name=\"omim-OMIM.58314580\"> </a></td><td>WIEACKER-WOLFF SYNDROME; WRWF</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600059<a name=\"omim-OMIM.58600059\"> </a></td><td>RETINITIS PIGMENTOSA 13; RP13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600105<a name=\"omim-OMIM.58600105\"> </a></td><td>RETINITIS PIGMENTOSA 12; RP12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600118<a name=\"omim-OMIM.58600118\"> </a></td><td>WARBURG MICRO SYNDROME 1; WARBM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600132<a name=\"omim-OMIM.58600132\"> </a></td><td>RETINITIS PIGMENTOSA 14; RP14</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600138<a name=\"omim-OMIM.58600138\"> </a></td><td>RETINITIS PIGMENTOSA 11; RP11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600143<a name=\"omim-OMIM.58600143\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 8; CLN8</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600334<a name=\"omim-OMIM.58600334\"> </a></td><td>TIBIAL MUSCULAR DYSTROPHY, TARDIVE; TMD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600373<a name=\"omim-OMIM.58600373\"> </a></td><td>CODAS SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600618<a name=\"omim-OMIM.58600618\"> </a></td><td>ETS VARIANT GENE 6; ETV6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600995<a name=\"omim-OMIM.58600995\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 2; NPHS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601088<a name=\"omim-OMIM.58601088\"> </a></td><td>AYME-GRIPP SYNDROME; AYGRP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601414<a name=\"omim-OMIM.58601414\"> </a></td><td>RETINITIS PIGMENTOSA 18; RP18</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601419<a name=\"omim-OMIM.58601419\"> </a></td><td>MYOPATHY, MYOFIBRILLAR, 1; MFM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601680<a name=\"omim-OMIM.58601680\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, TYPE 2B1; DA2B1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601718<a name=\"omim-OMIM.58601718\"> </a></td><td>RETINITIS PIGMENTOSA 19; RP19</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601780<a name=\"omim-OMIM.58601780\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 6; CLN6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601815<a name=\"omim-OMIM.58601815\"> </a></td><td>PHOSPHOGLYCERATE DEHYDROGENASE DEFICIENCY; PHGDHD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601954<a name=\"omim-OMIM.58601954\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 7; LGMDR7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:602482<a name=\"omim-OMIM.58602482\"> </a></td><td>AXENFELD-RIEGER SYNDROME, TYPE 3; RIEG3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:602579<a name=\"omim-OMIM.58602579\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ib; CDG1B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:602772<a name=\"omim-OMIM.58602772\"> </a></td><td>RETINITIS PIGMENTOSA 25; RP25</td></tr><tr><td style=\"white-space:nowrap\">OMIM:603511<a name=\"omim-OMIM.58603511\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL DOMINANT 1; LGMDD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:603896<a name=\"omim-OMIM.58603896\"> </a></td><td>LEUKOENCEPHALOPATHY WITH VANISHING WHITE MATTER; VWM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604004<a name=\"omim-OMIM.58604004\"> </a></td><td>MEGALENCEPHALIC LEUKOENCEPHALOPATHY WITH SUBCORTICAL CYSTS 1; MLC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604116<a name=\"omim-OMIM.58604116\"> </a></td><td>CONE-ROD DYSTROPHY 3; CORD3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604273<a name=\"omim-OMIM.58604273\"> </a></td><td>MITOCHONDRIAL COMPLEX V (ATP SYNTHASE) DEFICIENCY, NUCLEAR TYPE 1; MC5DN1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604286<a name=\"omim-OMIM.58604286\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 4; LGMDR4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604317<a name=\"omim-OMIM.58604317\"> </a></td><td>MICROCEPHALY 2, PRIMARY, AUTOSOMAL RECESSIVE, WITH OR WITHOUT CORTICAL MALFORMATIONS; MCPH2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604360<a name=\"omim-OMIM.58604360\"> </a></td><td>SPASTIC PARAPLEGIA 11, AUTOSOMAL RECESSIVE; SPG11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604387<a name=\"omim-OMIM.58604387\"> </a></td><td>NEPHRONOPHTHISIS 3; NPHP3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604537<a name=\"omim-OMIM.58604537\"> </a></td><td>LEBER CONGENITAL AMAUROSIS 5; LCA5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604592<a name=\"omim-OMIM.58604592\"> </a></td><td>T CELL IMMUNE REGULATOR 1; TCIRG1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605130<a name=\"omim-OMIM.58605130\"> </a></td><td>WIEDEMANN-STEINER SYNDROME; WDSTS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605355<a name=\"omim-OMIM.58605355\"> </a></td><td>NEMALINE MYOPATHY 5; NEM5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605407<a name=\"omim-OMIM.58605407\"> </a></td><td>SEGAWA SYNDROME, AUTOSOMAL RECESSIVE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605637<a name=\"omim-OMIM.58605637\"> </a></td><td>MYOPATHY, PROXIMAL, WITH OPHTHALMOPLEGIA; MYPOP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605670<a name=\"omim-OMIM.58605670\"> </a></td><td>LATE-ONSET RETINAL DEGENERATION; LORD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605820<a name=\"omim-OMIM.58605820\"> </a></td><td>NONAKA MYOPATHY; NM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605899<a name=\"omim-OMIM.58605899\"> </a></td><td>GLYCINE ENCEPHALOPATHY; GCE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606068<a name=\"omim-OMIM.58606068\"> </a></td><td>RETINITIS PIGMENTOSA 28; RP28</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606170<a name=\"omim-OMIM.58606170\"> </a></td><td>GENITOPATELLAR SYNDROME; GTPTS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606232<a name=\"omim-OMIM.58606232\"> </a></td><td>PHELAN-MCDERMID SYNDROME; PHMDS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606777<a name=\"omim-OMIM.58606777\"> </a></td><td>GLUT1 DEFICIENCY SYNDROME 1; GLUT1DS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606854<a name=\"omim-OMIM.58606854\"> </a></td><td>POLYMICROGYRIA, BILATERAL FRONTOPARIETAL; BFPP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606966<a name=\"omim-OMIM.58606966\"> </a></td><td>NEPHRONOPHTHISIS 4; NPHP4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606996<a name=\"omim-OMIM.58606996\"> </a></td><td>SENIOR-LOKEN SYNDROME 4; SLSN4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607015<a name=\"omim-OMIM.58607015\"> </a></td><td>HURLER-SCHEIE SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607155<a name=\"omim-OMIM.58607155\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 5; MDDGC5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607196<a name=\"omim-OMIM.58607196\"> </a></td><td>MICROCEPHALY, AMISH TYPE; MCPHA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607225<a name=\"omim-OMIM.58607225\"> </a></td><td>SPASTIC PARALYSIS, INFANTILE-ONSET ASCENDING; IAHSP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607426<a name=\"omim-OMIM.58607426\"> </a></td><td>COENZYME Q10 DEFICIENCY, PRIMARY, 1; COQ10D1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607432<a name=\"omim-OMIM.58607432\"> </a></td><td>LISSENCEPHALY 1; LIS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607483<a name=\"omim-OMIM.58607483\"> </a></td><td>THIAMINE METABOLISM DYSFUNCTION SYNDROME 2 (BIOTIN- OR THIAMINE-RESPONSIVE TYPE); THMD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607595<a name=\"omim-OMIM.58607595\"> </a></td><td>MOVED TO 175780</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607596<a name=\"omim-OMIM.58607596\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 1A; PCH1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607855<a name=\"omim-OMIM.58607855\"> </a></td><td>MUSCULAR DYSTROPHY, CONGENITAL MEROSIN-DEFICIENT, 1A; MDC1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608027<a name=\"omim-OMIM.58608027\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 3; PCH3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608091<a name=\"omim-OMIM.58608091\"> </a></td><td>JOUBERT SYNDROME 2; JBTS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608099<a name=\"omim-OMIM.58608099\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 3; LGMDR3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608133<a name=\"omim-OMIM.58608133\"> </a></td><td>RETINITIS PIGMENTOSA 7; RP7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608358<a name=\"omim-OMIM.58608358\"> </a></td><td>MYOPATHY, MYOSIN STORAGE, AUTOSOMAL DOMINANT; MSMA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608380<a name=\"omim-OMIM.58608380\"> </a></td><td>RETINITIS PIGMENTOSA 26; RP26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608393<a name=\"omim-OMIM.58608393\"> </a></td><td>MICROCEPHALY 6, PRIMARY, AUTOSOMAL RECESSIVE; MCPH6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608415<a name=\"omim-OMIM.58608415\"> </a></td><td>PROLONGED ELECTRORETINAL RESPONSE SUPPRESSION; PERRS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608423<a name=\"omim-OMIM.58608423\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL DOMINANT 2; LGMDD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608540<a name=\"omim-OMIM.58608540\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ik; CDG1K</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608629<a name=\"omim-OMIM.58608629\"> </a></td><td>JOUBERT SYNDROME 3; JBTS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608643<a name=\"omim-OMIM.58608643\"> </a></td><td>AROMATIC L-AMINO ACID DECARBOXYLASE DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608716<a name=\"omim-OMIM.58608716\"> </a></td><td>MICROCEPHALY 5, PRIMARY, AUTOSOMAL RECESSIVE; MCPH5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608804<a name=\"omim-OMIM.58608804\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 2; HLD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608807<a name=\"omim-OMIM.58608807\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 10; LGMDR10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609033<a name=\"omim-OMIM.58609033\"> </a></td><td>POSTERIOR COLUMN ATAXIA WITH RETINITIS PIGMENTOSA; AXPC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609056<a name=\"omim-OMIM.58609056\"> </a></td><td>SALT AND PEPPER DEVELOPMENTAL REGRESSION SYNDROME; SPDRS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609195<a name=\"omim-OMIM.58609195\"> </a></td><td>SPASTIC PARAPLEGIA 26, AUTOSOMAL RECESSIVE; SPG26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609200<a name=\"omim-OMIM.58609200\"> </a></td><td>MYOPATHY, MYOFIBRILLAR, 3; MFM3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609260<a name=\"omim-OMIM.58609260\"> </a></td><td>CHARCOT-MARIE-TOOTH DISEASE, AXONAL, AUTOSOMAL DOMINANT, TYPE 2A2A; CMT2A2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609270<a name=\"omim-OMIM.58609270\"> </a></td><td>SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 7; SCAR7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609304<a name=\"omim-OMIM.58609304\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 3; DEE3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609524<a name=\"omim-OMIM.58609524\"> </a></td><td>MYOPATHY, MYOFIBRILLAR, 5; MFM5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609560<a name=\"omim-OMIM.58609560\"> </a></td><td>MITOCHONDRIAL DNA DEPLETION SYNDROME 2 (MYOPATHIC TYPE); MTDPS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609923<a name=\"omim-OMIM.58609923\"> </a></td><td>RETINITIS PIGMENTOSA 31; RP31</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610019<a name=\"omim-OMIM.58610019\"> </a></td><td>CATARACT 18; CTRCT18</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610031<a name=\"omim-OMIM.58610031\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 7; CDCBM7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610127<a name=\"omim-OMIM.58610127\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 10; CLN10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610181<a name=\"omim-OMIM.58610181\"> </a></td><td>AICARDI-GOUTIERES SYNDROME 2; AGS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610188<a name=\"omim-OMIM.58610188\"> </a></td><td>JOUBERT SYNDROME 5; JBTS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610217<a name=\"omim-OMIM.58610217\"> </a></td><td>NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 2B; NBIA2B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610329<a name=\"omim-OMIM.58610329\"> </a></td><td>AICARDI-GOUTIERES SYNDROME 3; AGS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610333<a name=\"omim-OMIM.58610333\"> </a></td><td>AICARDI-GOUTIERES SYNDROME 4; AGS4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610359<a name=\"omim-OMIM.58610359\"> </a></td><td>RETINITIS PIGMENTOSA 33; RP33</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610443<a name=\"omim-OMIM.58610443\"> </a></td><td>KOOLEN-DE VRIES SYNDROME; KDVS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610444<a name=\"omim-OMIM.58610444\"> </a></td><td>NIGHT BLINDNESS, CONGENITAL STATIONARY, AUTOSOMAL DOMINANT 3; CSNBAD3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610489<a name=\"omim-OMIM.58610489\"> </a></td><td>PIGMENTED NODULAR ADRENOCORTICAL DISEASE, PRIMARY, 1; PPNAD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610532<a name=\"omim-OMIM.58610532\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 5; HLD5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610688<a name=\"omim-OMIM.58610688\"> </a></td><td>JOUBERT SYNDROME 6; JBTS6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610725<a name=\"omim-OMIM.58610725\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 3; NPHS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610951<a name=\"omim-OMIM.58610951\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 7; CLN7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611091<a name=\"omim-OMIM.58611091\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL RECESSIVE 5; MRT5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611302<a name=\"omim-OMIM.58611302\"> </a></td><td>SPASTIC ATAXIA 2, AUTOSOMAL RECESSIVE; SPAX2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611307<a name=\"omim-OMIM.58611307\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 12; LGMDR12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611560<a name=\"omim-OMIM.58611560\"> </a></td><td>JOUBERT SYNDROME 7; JBTS7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611603<a name=\"omim-OMIM.58611603\"> </a></td><td>LISSENCEPHALY 3; LIS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611705<a name=\"omim-OMIM.58611705\"> </a></td><td>SALIH MYOPATHY; SALMY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611721<a name=\"omim-OMIM.58611721\"> </a></td><td>COMBINED SAPOSIN DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611726<a name=\"omim-OMIM.58611726\"> </a></td><td>EPILEPSY, PROGRESSIVE MYOCLONIC, 3, WITH OR WITHOUT INTRACELLULAR INCLUSIONS; EPM3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611755<a name=\"omim-OMIM.58611755\"> </a></td><td>LEBER CONGENITAL AMAUROSIS 10; LCA10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612015<a name=\"omim-OMIM.58612015\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE In; CDG1N</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612095<a name=\"omim-OMIM.58612095\"> </a></td><td>RETINITIS PIGMENTOSA 41; RP41</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612126<a name=\"omim-OMIM.58612126\"> </a></td><td>GLUT1 DEFICIENCY SYNDROME 2; GLUT1DS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612285<a name=\"omim-OMIM.58612285\"> </a></td><td>JOUBERT SYNDROME 9; JBTS9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612337<a name=\"omim-OMIM.58612337\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 22; MRD22</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612370<a name=\"omim-OMIM.58612370\"> </a></td><td>HYPOGONADOTROPIC HYPOGONADISM 5 WITH OR WITHOUT ANOSMIA; HH5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612438<a name=\"omim-OMIM.58612438\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 6; HLD6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612528<a name=\"omim-OMIM.58612528\"> </a></td><td>DIAMOND-BLACKFAN ANEMIA 5; DBA5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612621<a name=\"omim-OMIM.58612621\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 5; MRD5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612712<a name=\"omim-OMIM.58612712\"> </a></td><td>LEBER CONGENITAL AMAUROSIS 13; LCA13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612716<a name=\"omim-OMIM.58612716\"> </a></td><td>DYSTONIA, DOPA-RESPONSIVE, DUE TO SEPIAPTERIN REDUCTASE DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612780<a name=\"omim-OMIM.58612780\"> </a></td><td>SEIZURES, SENSORINEURAL DEAFNESS, ATAXIA, MENTAL RETARDATION, AND ELECTROLYTE IMBALANCE; SESAMES</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612936<a name=\"omim-OMIM.58612936\"> </a></td><td>SPASTIC PARAPLEGIA 50, AUTOSOMAL RECESSIVE; SPG50</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612943<a name=\"omim-OMIM.58612943\"> </a></td><td>RETINITIS PIGMENTOSA 42; RP42</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612951<a name=\"omim-OMIM.58612951\"> </a></td><td>LEUKOENCEPHALOPATHY, CYSTIC, WITHOUT MEGALENCEPHALY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613065<a name=\"omim-OMIM.58613065\"> </a></td><td>LEUKEMIA, ACUTE LYMPHOBLASTIC; ALL</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613091<a name=\"omim-OMIM.58613091\"> </a></td><td>SHORT-RIB THORACIC DYSPLASIA 3 WITH OR WITHOUT POLYDACTYLY; SRTD3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613155<a name=\"omim-OMIM.58613155\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH IMPAIRED INTELLECTUAL IMPAIRMENT), TYPE B, 1; MDDGB1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613156<a name=\"omim-OMIM.58613156\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH IMPAIRED INTELLECTUAL DEVELOPMENT), TYPE B, 2; MDDGB2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613158<a name=\"omim-OMIM.58613158\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 2; MDDGC2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613192<a name=\"omim-OMIM.58613192\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL RECESSIVE 13; MRT13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613205<a name=\"omim-OMIM.58613205\"> </a></td><td>MUSCULAR DYSTROPHY, CONGENITAL, LMNA-RELATED</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613216<a name=\"omim-OMIM.58613216\"> </a></td><td>NIGHT BLINDNESS, CONGENITAL STATIONARY, TYPE 1C; CSNB1C</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613217<a name=\"omim-OMIM.58613217\"> </a></td><td>DIARRHEA 5, WITH TUFTING ENTEROPATHY, CONGENITAL; DIAR5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613402<a name=\"omim-OMIM.58613402\"> </a></td><td>MICROCEPHALY, SEIZURES, AND DEVELOPMENTAL DELAY; MCSZ</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613428<a name=\"omim-OMIM.58613428\"> </a></td><td>RETINITIS PIGMENTOSA 54; RP54</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613454<a name=\"omim-OMIM.58613454\"> </a></td><td>RETT SYNDROME, CONGENITAL VARIANT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613550<a name=\"omim-OMIM.58613550\"> </a></td><td>NEPHRONOPHTHISIS 11; NPHP11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613561<a name=\"omim-OMIM.58613561\"> </a></td><td>MYOPATHY, LACTIC ACIDOSIS, AND SIDEROBLASTIC ANEMIA 2; MLASA2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613587<a name=\"omim-OMIM.58613587\"> </a></td><td>OCCULT MACULAR DYSTROPHY; OCMD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613612<a name=\"omim-OMIM.58613612\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIi; CDG2I</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613660<a name=\"omim-OMIM.58613660\"> </a></td><td>CONE-ROD DYSTROPHY 15; CORD15</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613668<a name=\"omim-OMIM.58613668\"> </a></td><td>MICROCEPHALY, POSTNATAL PROGRESSIVE, WITH SEIZURES AND BRAIN ATROPHY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613680<a name=\"omim-OMIM.58613680\"> </a></td><td>BEAULIEU-BOYCOTT-INNES SYNDROME; BBIS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613684<a name=\"omim-OMIM.58613684\"> </a></td><td>RUBINSTEIN-TAYBI SYNDROME 2; RSTS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613690<a name=\"omim-OMIM.58613690\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 7; CMH7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613706<a name=\"omim-OMIM.58613706\"> </a></td><td>NOONAN SYNDROME 7; NS7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613722<a name=\"omim-OMIM.58613722\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 12; DEE12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613731<a name=\"omim-OMIM.58613731\"> </a></td><td>RETINITIS PIGMENTOSA 4; RP4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613744<a name=\"omim-OMIM.58613744\"> </a></td><td>SPASTIC PARAPLEGIA 51, AUTOSOMAL RECESSIVE; SPG51</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613750<a name=\"omim-OMIM.58613750\"> </a></td><td>RETINITIS PIGMENTOSA 27; RP27</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613756<a name=\"omim-OMIM.58613756\"> </a></td><td>RETINITIS PIGMENTOSA 49; RP49</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613767<a name=\"omim-OMIM.58613767\"> </a></td><td>RETINITIS PIGMENTOSA 45; RP45</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613794<a name=\"omim-OMIM.58613794\"> </a></td><td>RETINITIS PIGMENTOSA 20; RP20</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613809<a name=\"omim-OMIM.58613809\"> </a></td><td>RETINITIS PIGMENTOSA 39; RP39</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613810<a name=\"omim-OMIM.58613810\"> </a></td><td>RETINITIS PIGMENTOSA 43; RP43</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613811<a name=\"omim-OMIM.58613811\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 2D; PCH2D</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613820<a name=\"omim-OMIM.58613820\"> </a></td><td>NEPHRONOPHTHISIS 12; NPHP12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613835<a name=\"omim-OMIM.58613835\"> </a></td><td>LEBER CONGENITAL AMAUROSIS 8; LCA8</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613861<a name=\"omim-OMIM.58613861\"> </a></td><td>RETINITIS PIGMENTOSA 59; RP59</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613862<a name=\"omim-OMIM.58613862\"> </a></td><td>RETINITIS PIGMENTOSA 38; RP38</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614034<a name=\"omim-OMIM.58614034\"> </a></td><td>HEME OXYGENASE 1 DEFICIENCY; HMOX1D</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614065<a name=\"omim-OMIM.58614065\"> </a></td><td>MYOPATHY, DISTAL, 4; MPD4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614173<a name=\"omim-OMIM.58614173\"> </a></td><td>JOUBERT SYNDROME 13; JBTS13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614180<a name=\"omim-OMIM.58614180\"> </a></td><td>RETINITIS PIGMENTOSA 61; RP61</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614181<a name=\"omim-OMIM.58614181\"> </a></td><td>RETINITIS PIGMENTOSA 62; RP62</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614199<a name=\"omim-OMIM.58614199\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 5, WITH OR WITHOUT OCULAR ABNORMALITIES; NPHS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614202<a name=\"omim-OMIM.58614202\"> </a></td><td>RAFIQ SYNDROME; RAFQS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614225<a name=\"omim-OMIM.58614225\"> </a></td><td>WARBURG MICRO SYNDROME 2; WARBM2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614254<a name=\"omim-OMIM.58614254\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH OR WITHOUT HYPERKINETIC MOVEMENTS AND SEIZURES, AUTOSOMAL DOMINANT; NDHMSD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614255<a name=\"omim-OMIM.58614255\"> </a></td><td>NESCAV SYNDROME; NESCAVS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614299<a name=\"omim-OMIM.58614299\"> </a></td><td>MULTIPLE MITOCHONDRIAL DYSFUNCTIONS SYNDROME 2 WITH HYPERGLYCINEMIA; MMDS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614381<a name=\"omim-OMIM.58614381\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 8, WITH OR WITHOUT OLIGODONTIA AND/OR HYPOGONADOTROPIC HYPOGONADISM; HLD8</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614424<a name=\"omim-OMIM.58614424\"> </a></td><td>JOUBERT SYNDROME 14; JBTS14</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614500<a name=\"omim-OMIM.58614500\"> </a></td><td>CONE-ROD DYSTROPHY 16; CORD16</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614557<a name=\"omim-OMIM.58614557\"> </a></td><td>EHLERS-DANLOS SYNDROME, KYPHOSCOLIOTIC TYPE, 2; EDSKSCL2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614607<a name=\"omim-OMIM.58614607\"> </a></td><td>COFFIN-SIRIS SYNDROME 2; CSS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614615<a name=\"omim-OMIM.58614615\"> </a></td><td>JOUBERT SYNDROME 17; JBTS17</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614669<a name=\"omim-OMIM.58614669\"> </a></td><td>AURICULOCONDYLAR SYNDROME 2; ARCND2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614678<a name=\"omim-OMIM.58614678\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 1B; PCH1B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614744<a name=\"omim-OMIM.58614744\"> </a></td><td>FACIAL PARESIS, HEREDITARY CONGENITAL, 3; HCFP3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614753<a name=\"omim-OMIM.58614753\"> </a></td><td>SOTOS SYNDROME 2; SOTOS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614831<a name=\"omim-OMIM.58614831\"> </a></td><td>SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 13; SCAR13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614833<a name=\"omim-OMIM.58614833\"> </a></td><td>MICROCEPHALY, SHORT STATURE, AND POLYMICROGYRIA WITH OR WITHOUT SEIZURES; MSSP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614876<a name=\"omim-OMIM.58614876\"> </a></td><td>PEROXISOME BIOGENESIS DISORDER 8A (ZELLWEGER); PBD8A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614877<a name=\"omim-OMIM.58614877\"> </a></td><td>PEROXISOME BIOGENESIS DISORDER 8B; PBD8B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614932<a name=\"omim-OMIM.58614932\"> </a></td><td>COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 13; COXPD13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614945<a name=\"omim-OMIM.58614945\"> </a></td><td>DEAFNESS, AUTOSOMAL RECESSIVE 18B; DFNB18B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615030<a name=\"omim-OMIM.58615030\"> </a></td><td>SPASTIC PARAPLEGIA 56, AUTOSOMAL RECESSIVE; SPG56</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615031<a name=\"omim-OMIM.58615031\"> </a></td><td>SPASTIC PARAPLEGIA 49, AUTOSOMAL RECESSIVE; SPG49</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615065<a name=\"omim-OMIM.58615065\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, TYPE 5D; DA5D</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615071<a name=\"omim-OMIM.58615071\"> </a></td><td>ALAZAMI SYNDROME; ALAZS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615095<a name=\"omim-OMIM.58615095\"> </a></td><td>MICROCEPHALY 10, PRIMARY, AUTOSOMAL RECESSIVE; MCPH10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615181<a name=\"omim-OMIM.58615181\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH BRAIN AND EYE ANOMALIES), TYPE A, 11; MDDGA11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615190<a name=\"omim-OMIM.58615190\"> </a></td><td>DYSKERATOSIS CONGENITA, AUTOSOMAL RECESSIVE 5; DKCB5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615191<a name=\"omim-OMIM.58615191\"> </a></td><td>LISSENCEPHALY 5; LIS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615268<a name=\"omim-OMIM.58615268\"> </a></td><td>CEREBELLAR ATAXIA, MENTAL RETARDATION, AND DYSEQUILIBRIUM SYNDROME 4; CAMRQ4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615286<a name=\"omim-OMIM.58615286\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL RECESSIVE 36; MRT36</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615352<a name=\"omim-OMIM.58615352\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 14; MDDGC14</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615411<a name=\"omim-OMIM.58615411\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 3; CDCBM3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615412<a name=\"omim-OMIM.58615412\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 4; CDCBM4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615419<a name=\"omim-OMIM.58615419\"> </a></td><td>HYPOTONIA, INFANTILE, WITH PSYCHOMOTOR RETARDATION AND CHARACTERISTIC FACIES 1; IHPRF1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615471<a name=\"omim-OMIM.58615471\"> </a></td><td>MITOCHONDRIAL DNA DEPLETION SYNDROME 13 (ENCEPHALOMYOPATHIC TYPE); MTDPS13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615476<a name=\"omim-OMIM.58615476\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 18; DEE18</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615485<a name=\"omim-OMIM.58615485\"> </a></td><td>BAINBRIDGE-ROPERS SYNDROME; BRPS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615502<a name=\"omim-OMIM.58615502\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 21; MRD21</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615546<a name=\"omim-OMIM.58615546\"> </a></td><td>VAN MALDERGEM SYNDROME 2; VMLDS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615574<a name=\"omim-OMIM.58615574\"> </a></td><td>ASPARAGINE SYNTHETASE DEFICIENCY; ASNSD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615681<a name=\"omim-OMIM.58615681\"> </a></td><td>SPASTIC PARAPLEGIA 62, AUTOSOMAL RECESSIVE; SPG62</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615715<a name=\"omim-OMIM.58615715\"> </a></td><td>BONE MARROW FAILURE SYNDROME 2; BMFS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615716<a name=\"omim-OMIM.58615716\"> </a></td><td>HYPERPHOSPHATASIA WITH MENTAL RETARDATION SYNDROME 4; HPMRS4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615760<a name=\"omim-OMIM.58615760\"> </a></td><td>MICROCEPHALY, PROGRESSIVE, WITH SEIZURES AND CEREBRAL AND CEREBELLAR ATROPHY; MSCCA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615763<a name=\"omim-OMIM.58615763\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 5; CDCBM5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615809<a name=\"omim-OMIM.58615809\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 9; PCH9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615829<a name=\"omim-OMIM.58615829\"> </a></td><td>XIA-GIBBS SYNDROME; XIGIS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615834<a name=\"omim-OMIM.58615834\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 26; MRD26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615846<a name=\"omim-OMIM.58615846\"> </a></td><td>AICARDI-GOUTIERES SYNDROME 7; AGS7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615866<a name=\"omim-OMIM.58615866\"> </a></td><td>COFFIN-SIRIS SYNDROME 9; CSS9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615909<a name=\"omim-OMIM.58615909\"> </a></td><td>DIAMOND-BLACKFAN ANEMIA 13; DBA13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615948<a name=\"omim-OMIM.58615948\"> </a></td><td>OROFACIODIGITAL SYNDROME XIV; OFD14</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615959<a name=\"omim-OMIM.58615959\"> </a></td><td>MYOPATHY, CENTRONUCLEAR, 5; CNM5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615960<a name=\"omim-OMIM.58615960\"> </a></td><td>PORETTI-BOLTSHAUSER SYNDROME; PTBHS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615973<a name=\"omim-OMIM.58615973\"> </a></td><td>CONE-ROD DYSTROPHY 20; CORD20</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615981<a name=\"omim-OMIM.58615981\"> </a></td><td>BARDET-BIEDL SYNDROME 2; BBS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615982<a name=\"omim-OMIM.58615982\"> </a></td><td>BARDET-BIEDL SYNDROME 4; BBS4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615983<a name=\"omim-OMIM.58615983\"> </a></td><td>BARDET-BIEDL SYNDROME 5; BBS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615993<a name=\"omim-OMIM.58615993\"> </a></td><td>BARDET-BIEDL SYNDROME 16; BBS16</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616051<a name=\"omim-OMIM.58616051\"> </a></td><td>MICROCEPHALY 13, PRIMARY, AUTOSOMAL RECESSIVE; MCPH13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616056<a name=\"omim-OMIM.58616056\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 26; DEE26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616081<a name=\"omim-OMIM.58616081\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 1C; PCH1C</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616094<a name=\"omim-OMIM.58616094\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 12; MDDGC12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616127<a name=\"omim-OMIM.58616127\"> </a></td><td>SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 17; SCAR17</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616140<a name=\"omim-OMIM.58616140\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 9; HLD9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616155<a name=\"omim-OMIM.58616155\"> </a></td><td>CHARCOT-MARIE-TOOTH DISEASE, AXONAL, TYPE 2S; CMT2S</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616171<a name=\"omim-OMIM.58616171\"> </a></td><td>MICROCEPHALY AND CHORIORETINOPATHY, AUTOSOMAL RECESSIVE, 2; MCCRP2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616199<a name=\"omim-OMIM.58616199\"> </a></td><td>POLYGLUCOSAN BODY MYOPATHY 2; PGBM2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616211<a name=\"omim-OMIM.58616211\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 28; DEE28</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616263<a name=\"omim-OMIM.58616263\"> </a></td><td>NEUROLOGIC, ENDOCRINE, AND PANCREATIC DISEASE, MULTISYSTEM, INFANTILE-ONSET; IMNEPD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616266<a name=\"omim-OMIM.58616266\"> </a></td><td>CONGENITAL CONTRACTURES OF THE LIMBS AND FACE, HYPOTONIA, AND DEVELOPMENTAL DELAY; CLIFAHDD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616271<a name=\"omim-OMIM.58616271\"> </a></td><td>3-METHYLGLUTACONIC ACIDURIA, TYPE VII; MGCA7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616277<a name=\"omim-OMIM.58616277\"> </a></td><td>MITOCHONDRIAL SHORT-CHAIN ENOYL-CoA HYDRATASE 1 DEFICIENCY; ECHS1D</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616281<a name=\"omim-OMIM.58616281\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH SPASTIC PARAPLEGIA AND MICROCEPHALY; NEDSPM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616321<a name=\"omim-OMIM.58616321\"> </a></td><td>MYASTHENIC SYNDROME, CONGENITAL, 3A, SLOW-CHANNEL; CMS3A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616354<a name=\"omim-OMIM.58616354\"> </a></td><td>SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 20; SCAR20</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616394<a name=\"omim-OMIM.58616394\"> </a></td><td>RETINITIS PIGMENTOSA 71; RP71</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616420<a name=\"omim-OMIM.58616420\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 10; HLD10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616421<a name=\"omim-OMIM.58616421\"> </a></td><td>MYOCLONIC-ATONIC EPILEPSY; MAE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616471<a name=\"omim-OMIM.58616471\"> </a></td><td>BETHLEM MYOPATHY 2; BTHLM2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616490<a name=\"omim-OMIM.58616490\"> </a></td><td>JOUBERT SYNDROME 23; JBTS23</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616531<a name=\"omim-OMIM.58616531\"> </a></td><td>POLYMICROGYRIA, PERISYLVIAN, WITH CEREBELLAR HYPOPLASIA AND ARTHROGRYPOSIS; PMGYCHA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616544<a name=\"omim-OMIM.58616544\"> </a></td><td>RETINITIS PIGMENTOSA 73; RP73</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616562<a name=\"omim-OMIM.58616562\"> </a></td><td>RETINITIS PIGMENTOSA 74; RP74</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616564<a name=\"omim-OMIM.58616564\"> </a></td><td>NOONAN SYNDROME 10; NS10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616632<a name=\"omim-OMIM.58616632\"> </a></td><td>SEIZURES, CORTICAL BLINDNESS, AND MICROCEPHALY SYNDROME; SCBMS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616647<a name=\"omim-OMIM.58616647\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 35; DEE35</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616649<a name=\"omim-OMIM.58616649\"> </a></td><td>SPHEROCYTOSIS, TYPE 2; SPH2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616651<a name=\"omim-OMIM.58616651\"> </a></td><td>ROIFMAN SYNDROME; RFMN</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616654<a name=\"omim-OMIM.58616654\"> </a></td><td>JOUBERT SYNDROME 24; JBTS24</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616657<a name=\"omim-OMIM.58616657\"> </a></td><td>SPASTIC TETRAPLEGIA, THIN CORPUS CALLOSUM, AND PROGRESSIVE MICROCEPHALY; SPATCCM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616668<a name=\"omim-OMIM.58616668\"> </a></td><td>CHARCOT-MARIE-TOOTH DISEASE, AXONAL, TYPE 2X; CMT2X</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616683<a name=\"omim-OMIM.58616683\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 12; HLD12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616721<a name=\"omim-OMIM.58616721\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIn; CDG2N</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616732<a name=\"omim-OMIM.58616732\"> </a></td><td>OPTIC ATROPHY 10 WITH OR WITHOUT ATAXIA, MENTAL RETARDATION, AND SEIZURES; OPA10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616738<a name=\"omim-OMIM.58616738\"> </a></td><td>RADIOULNAR SYNOSTOSIS WITH AMEGAKARYOCYTIC THROMBOCYTOPENIA 2; RUSAT2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616740<a name=\"omim-OMIM.58616740\"> </a></td><td>IMMUNODEFICIENCY 46; IMD46</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616789<a name=\"omim-OMIM.58616789\"> </a></td><td>MENTAL RETARDATION AND DISTINCTIVE FACIAL FEATURES WITH OR WITHOUT CARDIAC DEFECTS; MRFACD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616801<a name=\"omim-OMIM.58616801\"> </a></td><td>HYPOTONIA, INFANTILE, WITH PSYCHOMOTOR RETARDATION AND CHARACTERISTIC FACIES 2; IHPRF2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616875<a name=\"omim-OMIM.58616875\"> </a></td><td>CEREBELLAR ATROPHY, VISUAL IMPAIRMENT, AND PSYCHOMOTOR RETARDATION; CAVIPMR</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616892<a name=\"omim-OMIM.58616892\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 12; NPHS12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616900<a name=\"omim-OMIM.58616900\"> </a></td><td>HYPOTONIA, INFANTILE, WITH PSYCHOMOTOR RETARDATION AND CHARACTERISTIC FACIES 3; IHPRF3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616973<a name=\"omim-OMIM.58616973\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 42; MRD42</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617011<a name=\"omim-OMIM.58617011\"> </a></td><td>MACROCEPHALY, DYSMORPHIC FACIES, AND PSYCHOMOTOR RETARDATION; MDFPMR</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617013<a name=\"omim-OMIM.58617013\"> </a></td><td>HYPERMANGANESEMIA WITH DYSTONIA 2; HMNDYT2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617047<a name=\"omim-OMIM.58617047\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 26; CMH26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617052<a name=\"omim-OMIM.58617052\"> </a></td><td>BONE MARROW FAILURE SYNDROME 3; BMFS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617053<a name=\"omim-OMIM.58617053\"> </a></td><td>MIRAGE SYNDROME; MIRAGE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617093<a name=\"omim-OMIM.58617093\"> </a></td><td>GROWTH RETARDATION, IMPAIRED INTELLECTUAL DEVELOPMENT, HYPOTONIA, AND HEPATOPATHY; GRIDHH</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617106<a name=\"omim-OMIM.58617106\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 42; DEE42</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617120<a name=\"omim-OMIM.58617120\"> </a></td><td>JOUBERT SYNDROME 27; JBTS27</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617121<a name=\"omim-OMIM.58617121\"> </a></td><td>JOUBERT SYNDROME 28; JBTS28</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617123<a name=\"omim-OMIM.58617123\"> </a></td><td>RETINITIS PIGMENTOSA 76; RP76</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617137<a name=\"omim-OMIM.58617137\"> </a></td><td>FRONTOMETAPHYSEAL DYSPLASIA 2; FMD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617146<a name=\"omim-OMIM.58617146\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, WITH IMPAIRED PROPRIOCEPTION AND TOUCH; DAIPT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617183<a name=\"omim-OMIM.58617183\"> </a></td><td>HAREL-YOON SYNDROME; HAYOS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617193<a name=\"omim-OMIM.58617193\"> </a></td><td>ENCEPHALOPATHY, PROGRESSIVE, EARLY-ONSET, WITH BRAIN ATROPHY AND THIN CORPUS CALLOSUM; PEBAT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617222<a name=\"omim-OMIM.58617222\"> </a></td><td>SUDDEN CARDIAC FAILURE, INFANTILE; SCFI</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617276<a name=\"omim-OMIM.58617276\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 48; DEE48</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617330<a name=\"omim-OMIM.58617330\"> </a></td><td>HYPOTONIA, ATAXIA, AND DELAYED DEVELOPMENT SYNDROME; HADDS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617350<a name=\"omim-OMIM.58617350\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 52; DEE52</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617397<a name=\"omim-OMIM.58617397\"> </a></td><td>PSEUDO-TORCH SYNDROME 2; PTORCH2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617433<a name=\"omim-OMIM.58617433\"> </a></td><td>RETINITIS PIGMENTOSA 78; RP78</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617443<a name=\"omim-OMIM.58617443\"> </a></td><td>BLEEDING DISORDER, PLATELET-TYPE, 21; BDPLT21</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617460<a name=\"omim-OMIM.58617460\"> </a></td><td>RETINITIS PIGMENTOSA 79; RP79</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617481<a name=\"omim-OMIM.58617481\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, HYPOTONIA, AND VARIABLE BRAIN ANOMALIES; NMIHBA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617537<a name=\"omim-OMIM.58617537\"> </a></td><td>RAHMAN SYNDROME; RMNS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617547<a name=\"omim-OMIM.58617547\"> </a></td><td>RETINAL DYSTROPHY WITH OR WITHOUT MACULAR STAPHYLOMA; RDMS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617622<a name=\"omim-OMIM.58617622\"> </a></td><td>JOUBERT SYNDROME 30; JBTS30</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617675<a name=\"omim-OMIM.58617675\"> </a></td><td>MYOPATHY, MITOCHONDRIAL, AND ATAXIA; MMYAT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617681<a name=\"omim-OMIM.58617681\"> </a></td><td>BLEPHAROCHEILODONTIC SYNDROME 2; BCDS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617694<a name=\"omim-OMIM.58617694\"> </a></td><td>AL KAISSI SYNDROME; ALKAS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617781<a name=\"omim-OMIM.58617781\"> </a></td><td>RETINITIS PIGMENTOSA 80; RP80</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617805<a name=\"omim-OMIM.58617805\"> </a></td><td>RENAL HYPODYSPLASIA/APLASIA 3; RHDA3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617807<a name=\"omim-OMIM.58617807\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH ATAXIC GAIT, ABSENT SPEECH, AND DECREASED CORTICAL WHITE MATTER; NDAGSCW</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617829<a name=\"omim-OMIM.58617829\"> </a></td><td>EPILEPTIC ENCEPHALOPATHY, INFANTILE OR EARLY CHILDHOOD, 2; IECEE2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617873<a name=\"omim-OMIM.58617873\"> </a></td><td>COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 35; COXPD35</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617948<a name=\"omim-OMIM.58617948\"> </a></td><td>ELLIPTOCYTOSIS 3; EL3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617954<a name=\"omim-OMIM.58617954\"> </a></td><td>MULTIPLE MITOCHONDRIAL DYSFUNCTIONS SYNDROME 6; MMDS6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618056<a name=\"omim-OMIM.58618056\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH CEREBELLAR ATROPHY AND WITH OR WITHOUT SEIZURES; NEDCAS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618088<a name=\"omim-OMIM.58618088\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH REGRESSION, ABNORMAL MOVEMENTS, LOSS OF SPEECH, AND SEIZURES; NEDAMSS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618129<a name=\"omim-OMIM.58618129\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL DOMINANT 4; LGMDD4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618138<a name=\"omim-OMIM.58618138\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 23; LGMDR23</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618174<a name=\"omim-OMIM.58618174\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 9; CDCBM9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618225<a name=\"omim-OMIM.58618225\"> </a></td><td>MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 4; MC1DN4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618273<a name=\"omim-OMIM.58618273\"> </a></td><td>MEGA-CORPUS-CALLOSUM SYNDROME WITH CEREBELLAR HYPOPLASIA AND CORTICAL MALFORMATIONS; MCCCHCM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618316<a name=\"omim-OMIM.58618316\"> </a></td><td>INTELLECTUAL DEVELOPMENTAL DISORDER WITH CARDIAC DEFECTS AND DYSMORPHIC FACIES; IDDCDF</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618325<a name=\"omim-OMIM.58618325\"> </a></td><td>LISSENCEPHALY 9 WITH COMPLEX BRAINSTEM MALFORMATION; LIS9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618404<a name=\"omim-OMIM.58618404\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 18; HLD18</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618512<a name=\"omim-OMIM.58618512\"> </a></td><td>O\\'DONNELL-LURIA-RODAN SYNDROME; ODLURO</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614921<a name=\"omim-OMIM.58614921\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE It; CDG1T</td></tr></table></div>" - }, - "url": "https://omim.org/", - "version": "0.2.0", - "name": "OMIM", - "title": "Online Mendelian Inheritance in Man", - "status": "draft", - "experimental": false, - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "An online database that describes the function and phenotypes associated with human genes", - "caseSensitive": true, - "content": "fragment", - "count": 497, - "concept": [ - { - "code": "OMIM:613801", - "display": "Retinitis pigmentosa-40" - }, - { - "code": "OMIM:213300", - "display": "Joubert syndrome 1" - }, - { - "code": "OMIM:615780", - "display": "Retinitis pigmentosa 69" - }, - { - "code": "OMIM:613826", - "display": "Leber congenital amaurosis 6" - }, - { - "code": "OMIM:310200", - "display": "Duchenne muscular dystrophy" - }, - { - "code": "OMIM:617194", - "display": "Lethal congenital contracture syndrome 11" - }, - { - "code": "OMIM:105400", - "display": "AMYOTROPHIC LATERAL SCLEROSIS 1; ALS1" - }, - { - "code": "OMIM:108120", - "display": "ARTHROGRYPOSIS, DISTAL, TYPE 1A; DA1A" - }, - { - "code": "OMIM:114300", - "display": "ARTHROGRYPOSIS, DISTAL, TYPE 3; DA3" - }, - { - "code": "OMIM:115195", - "display": "CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 2; CMH2" - }, - { - "code": "OMIM:115196", - "display": "CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 3; CMH3" - }, - { - "code": "OMIM:115197", - "display": "CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 4; CMH4" - }, - { - "code": "OMIM:115200", - "display": "CARDIOMYOPATHY, DILATED, 1A; CMD1A" - }, - { - "code": "OMIM:117000", - "display": "CENTRAL CORE DISEASE OF MUSCLE; CCD" - }, - { - "code": "OMIM:117360", - "display": "SPINOCEREBELLAR ATAXIA 29; SCA29" - }, - { - "code": "OMIM:119530", - "display": "OROFACIAL CLEFT 1; OFC1" - }, - { - "code": "OMIM:122470", - "display": "CORNELIA DE LANGE SYNDROME 1; CDLS1" - }, - { - "code": "OMIM:130600", - "display": "ELLIPTOCYTOSIS 2; EL2" - }, - { - "code": "OMIM:135900", - "display": "COFFIN-SIRIS SYNDROME 1; CSS1" - }, - { - "code": "OMIM:136140", - "display": "FLOATING-HARBOR SYNDROME; FLHS" - }, - { - "code": "OMIM:137920", - "display": "RENAL CYSTS AND DIABETES SYNDROME; RCAD" - }, - { - "code": "OMIM:139090", - "display": "GRAY PLATELET SYNDROME; GPS" - }, - { - "code": "OMIM:139210", - "display": "MYHRE SYNDROME; MYHRS" - }, - { - "code": "OMIM:143095", - "display": "SPONDYLOEPIPHYSEAL DYSPLASIA WITH CONGENITAL JOINT DISLOCATIONS; SEDCJD" - }, - { - "code": "OMIM:143465", - "display": "ATTENTION DEFICIT-HYPERACTIVITY DISORDER; ADHD" - }, - { - "code": "OMIM:147891", - "display": "ISCHIOCOXOPODOPATELLAR SYNDROME WITH OR WITHOUT PULMONARY ARTERIAL HYPERTENSION; ICPPS" - }, - { - "code": "OMIM:147920", - "display": "KABUKI SYNDROME 1; KABUK1" - }, - { - "code": "OMIM:148050", - "display": "KBG SYNDROME; KBGS" - }, - { - "code": "OMIM:149400", - "display": "HYPEREKPLEXIA 1; HKPX1" - }, - { - "code": "OMIM:152950", - "display": "MICROCEPHALY WITH OR WITHOUT CHORIORETINOPATHY, LYMPHEDEMA, OR MENTAL RETARDATION; 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MRT36" - }, - { - "code": "OMIM:615352", - "display": "MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 14; MDDGC14" - }, - { - "code": "OMIM:615411", - "display": "CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 3; CDCBM3" - }, - { - "code": "OMIM:615412", - "display": "CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 4; CDCBM4" - }, - { - "code": "OMIM:615419", - "display": "HYPOTONIA, INFANTILE, WITH PSYCHOMOTOR RETARDATION AND CHARACTERISTIC FACIES 1; IHPRF1" - }, - { - "code": "OMIM:615471", - "display": "MITOCHONDRIAL DNA DEPLETION SYNDROME 13 (ENCEPHALOMYOPATHIC TYPE); MTDPS13" - }, - { - "code": "OMIM:615476", - "display": "DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 18; DEE18" - }, - { - "code": "OMIM:615485", - "display": "BAINBRIDGE-ROPERS SYNDROME; BRPS" - }, - { - "code": "OMIM:615502", - "display": "MENTAL RETARDATION, AUTOSOMAL DOMINANT 21; MRD21" - }, - { - "code": "OMIM:615546", - "display": "VAN MALDERGEM SYNDROME 2; VMLDS2" - }, - { - "code": "OMIM:615574", - "display": "ASPARAGINE SYNTHETASE DEFICIENCY; ASNSD" - }, - { - "code": "OMIM:615681", - "display": "SPASTIC PARAPLEGIA 62, AUTOSOMAL RECESSIVE; SPG62" - }, - { - "code": "OMIM:615715", - "display": "BONE MARROW FAILURE SYNDROME 2; BMFS2" - }, - { - "code": "OMIM:615716", - "display": "HYPERPHOSPHATASIA WITH MENTAL RETARDATION SYNDROME 4; HPMRS4" - }, - { - "code": "OMIM:615760", - "display": "MICROCEPHALY, PROGRESSIVE, WITH SEIZURES AND CEREBRAL AND CEREBELLAR ATROPHY; MSCCA" - }, - { - "code": "OMIM:615763", - "display": "CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 5; CDCBM5" - }, - { - "code": "OMIM:615809", - "display": "PONTOCEREBELLAR HYPOPLASIA, TYPE 9; PCH9" - }, - { - "code": "OMIM:615829", - "display": "XIA-GIBBS SYNDROME; XIGIS" - }, - { - "code": "OMIM:615834", - "display": "MENTAL RETARDATION, AUTOSOMAL DOMINANT 26; MRD26" - }, - { - "code": "OMIM:615846", - "display": "AICARDI-GOUTIERES SYNDROME 7; AGS7" - }, - { - "code": "OMIM:615866", - "display": "COFFIN-SIRIS SYNDROME 9; CSS9" - }, - { - "code": "OMIM:615909", - "display": "DIAMOND-BLACKFAN ANEMIA 13; DBA13" - }, - { - "code": "OMIM:615948", - "display": "OROFACIODIGITAL SYNDROME XIV; OFD14" - }, - { - "code": "OMIM:615959", - "display": "MYOPATHY, CENTRONUCLEAR, 5; CNM5" - }, - { - "code": "OMIM:615960", - "display": "PORETTI-BOLTSHAUSER SYNDROME; PTBHS" - }, - { - "code": "OMIM:615973", - "display": "CONE-ROD DYSTROPHY 20; CORD20" - }, - { - "code": "OMIM:615981", - "display": "BARDET-BIEDL SYNDROME 2; BBS2" - }, - { - "code": "OMIM:615982", - "display": "BARDET-BIEDL SYNDROME 4; BBS4" - }, - { - "code": "OMIM:615983", - "display": "BARDET-BIEDL SYNDROME 5; BBS5" - }, - { - "code": "OMIM:615993", - "display": "BARDET-BIEDL SYNDROME 16; BBS16" - }, - { - "code": "OMIM:616051", - "display": "MICROCEPHALY 13, PRIMARY, AUTOSOMAL RECESSIVE; MCPH13" - }, - { - "code": "OMIM:616056", - "display": "DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 26; DEE26" - }, - { - "code": "OMIM:616081", - "display": "PONTOCEREBELLAR HYPOPLASIA, TYPE 1C; PCH1C" - }, - { - "code": "OMIM:616094", - "display": "MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 12; MDDGC12" - }, - { - "code": "OMIM:616127", - "display": "SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 17; SCAR17" - }, - { - "code": "OMIM:616140", - "display": "LEUKODYSTROPHY, HYPOMYELINATING, 9; HLD9" - }, - { - "code": "OMIM:616155", - "display": "CHARCOT-MARIE-TOOTH DISEASE, AXONAL, TYPE 2S; CMT2S" - }, - { - "code": "OMIM:616171", - "display": "MICROCEPHALY AND CHORIORETINOPATHY, AUTOSOMAL RECESSIVE, 2; MCCRP2" - }, - { - "code": "OMIM:616199", - "display": "POLYGLUCOSAN BODY MYOPATHY 2; PGBM2" - }, - { - "code": "OMIM:616211", - "display": "DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 28; DEE28" - }, - { - "code": "OMIM:616263", - "display": "NEUROLOGIC, ENDOCRINE, AND PANCREATIC DISEASE, MULTISYSTEM, INFANTILE-ONSET; IMNEPD" - }, - { - "code": "OMIM:616266", - "display": "CONGENITAL CONTRACTURES OF THE LIMBS AND FACE, HYPOTONIA, AND DEVELOPMENTAL DELAY; CLIFAHDD" - }, - { - "code": "OMIM:616271", - "display": "3-METHYLGLUTACONIC ACIDURIA, TYPE VII; MGCA7" - }, - { - "code": "OMIM:616277", - "display": "MITOCHONDRIAL SHORT-CHAIN ENOYL-CoA HYDRATASE 1 DEFICIENCY; ECHS1D" - }, - { - "code": "OMIM:616281", - "display": "NEURODEVELOPMENTAL DISORDER WITH SPASTIC PARAPLEGIA AND MICROCEPHALY; NEDSPM" - }, - { - "code": "OMIM:616321", - "display": "MYASTHENIC SYNDROME, CONGENITAL, 3A, SLOW-CHANNEL; CMS3A" - }, - { - "code": "OMIM:616354", - "display": "SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 20; SCAR20" - }, - { - "code": "OMIM:616394", - "display": "RETINITIS PIGMENTOSA 71; RP71" - }, - { - "code": "OMIM:616420", - "display": "LEUKODYSTROPHY, HYPOMYELINATING, 10; HLD10" - }, - { - "code": "OMIM:616421", - "display": "MYOCLONIC-ATONIC EPILEPSY; MAE" - }, - { - "code": "OMIM:616471", - "display": "BETHLEM MYOPATHY 2; BTHLM2" - }, - { - "code": "OMIM:616490", - "display": "JOUBERT SYNDROME 23; JBTS23" - }, - { - "code": "OMIM:616531", - "display": "POLYMICROGYRIA, PERISYLVIAN, WITH CEREBELLAR HYPOPLASIA AND ARTHROGRYPOSIS; PMGYCHA" - }, - { - "code": "OMIM:616544", - "display": "RETINITIS PIGMENTOSA 73; RP73" - }, - { - "code": "OMIM:616562", - "display": "RETINITIS PIGMENTOSA 74; RP74" - }, - { - "code": "OMIM:616564", - "display": "NOONAN SYNDROME 10; NS10" - }, - { - "code": "OMIM:616632", - "display": "SEIZURES, CORTICAL BLINDNESS, AND MICROCEPHALY SYNDROME; SCBMS" - }, - { - "code": "OMIM:616647", - "display": "DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 35; DEE35" - }, - { - "code": "OMIM:616649", - "display": "SPHEROCYTOSIS, TYPE 2; SPH2" - }, - { - "code": "OMIM:616651", - "display": "ROIFMAN SYNDROME; RFMN" - }, - { - "code": "OMIM:616654", - "display": "JOUBERT SYNDROME 24; JBTS24" - }, - { - "code": "OMIM:616657", - "display": "SPASTIC TETRAPLEGIA, THIN CORPUS CALLOSUM, AND PROGRESSIVE MICROCEPHALY; SPATCCM" - }, - { - "code": "OMIM:616668", - "display": "CHARCOT-MARIE-TOOTH DISEASE, AXONAL, TYPE 2X; CMT2X" - }, - { - "code": "OMIM:616683", - "display": "LEUKODYSTROPHY, HYPOMYELINATING, 12; HLD12" - }, - { - "code": "OMIM:616721", - "display": "CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIn; CDG2N" - }, - { - "code": "OMIM:616732", - "display": "OPTIC ATROPHY 10 WITH OR WITHOUT ATAXIA, MENTAL RETARDATION, AND SEIZURES; OPA10" - }, - { - "code": "OMIM:616738", - "display": "RADIOULNAR SYNOSTOSIS WITH AMEGAKARYOCYTIC THROMBOCYTOPENIA 2; RUSAT2" - }, - { - "code": "OMIM:616740", - "display": "IMMUNODEFICIENCY 46; IMD46" - }, - { - "code": "OMIM:616789", - "display": "MENTAL RETARDATION AND DISTINCTIVE FACIAL FEATURES WITH OR WITHOUT CARDIAC DEFECTS; MRFACD" - }, - { - "code": "OMIM:616801", - "display": "HYPOTONIA, INFANTILE, WITH PSYCHOMOTOR RETARDATION AND CHARACTERISTIC FACIES 2; IHPRF2" - }, - { - "code": "OMIM:616875", - "display": "CEREBELLAR ATROPHY, VISUAL IMPAIRMENT, AND PSYCHOMOTOR RETARDATION; CAVIPMR" - }, - { - "code": "OMIM:616892", - "display": "NEPHROTIC SYNDROME, TYPE 12; NPHS12" - }, - { - "code": "OMIM:616900", - "display": "HYPOTONIA, INFANTILE, WITH PSYCHOMOTOR RETARDATION AND CHARACTERISTIC FACIES 3; IHPRF3" - }, - { - "code": "OMIM:616973", - "display": "MENTAL RETARDATION, AUTOSOMAL DOMINANT 42; MRD42" - }, - { - "code": "OMIM:617011", - "display": "MACROCEPHALY, DYSMORPHIC FACIES, AND PSYCHOMOTOR RETARDATION; MDFPMR" - }, - { - "code": "OMIM:617013", - "display": "HYPERMANGANESEMIA WITH DYSTONIA 2; HMNDYT2" - }, - { - "code": "OMIM:617047", - "display": "CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 26; CMH26" - }, - { - "code": "OMIM:617052", - "display": "BONE MARROW FAILURE SYNDROME 3; BMFS3" - }, - { - "code": "OMIM:617053", - "display": "MIRAGE SYNDROME; MIRAGE" - }, - { - "code": "OMIM:617093", - "display": "GROWTH RETARDATION, IMPAIRED INTELLECTUAL DEVELOPMENT, HYPOTONIA, AND HEPATOPATHY; GRIDHH" - }, - { - "code": "OMIM:617106", - "display": "DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 42; DEE42" - }, - { - "code": "OMIM:617120", - "display": "JOUBERT SYNDROME 27; JBTS27" - }, - { - "code": "OMIM:617121", - "display": "JOUBERT SYNDROME 28; JBTS28" - }, - { - "code": "OMIM:617123", - "display": "RETINITIS PIGMENTOSA 76; RP76" - }, - { - "code": "OMIM:617137", - "display": "FRONTOMETAPHYSEAL DYSPLASIA 2; FMD2" - }, - { - "code": "OMIM:617146", - "display": "ARTHROGRYPOSIS, DISTAL, WITH IMPAIRED PROPRIOCEPTION AND TOUCH; DAIPT" - }, - { - "code": "OMIM:617183", - "display": "HAREL-YOON SYNDROME; HAYOS" - }, - { - "code": "OMIM:617193", - "display": "ENCEPHALOPATHY, PROGRESSIVE, EARLY-ONSET, WITH BRAIN ATROPHY AND THIN CORPUS CALLOSUM; PEBAT" - }, - { - "code": "OMIM:617222", - "display": "SUDDEN CARDIAC FAILURE, INFANTILE; SCFI" - }, - { - "code": "OMIM:617276", - "display": "DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 48; DEE48" - }, - { - "code": "OMIM:617330", - "display": "HYPOTONIA, ATAXIA, AND DELAYED DEVELOPMENT SYNDROME; HADDS" - }, - { - "code": "OMIM:617350", - "display": "DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 52; DEE52" - }, - { - "code": "OMIM:617397", - "display": "PSEUDO-TORCH SYNDROME 2; PTORCH2" - }, - { - "code": "OMIM:617433", - "display": "RETINITIS PIGMENTOSA 78; RP78" - }, - { - "code": "OMIM:617443", - "display": "BLEEDING DISORDER, PLATELET-TYPE, 21; BDPLT21" - }, - { - "code": "OMIM:617460", - "display": "RETINITIS PIGMENTOSA 79; RP79" - }, - { - "code": "OMIM:617481", - "display": "NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, HYPOTONIA, AND VARIABLE BRAIN ANOMALIES; NMIHBA" - }, - { - "code": "OMIM:617537", - "display": "RAHMAN SYNDROME; RMNS" - }, - { - "code": "OMIM:617547", - "display": "RETINAL DYSTROPHY WITH OR WITHOUT MACULAR STAPHYLOMA; RDMS" - }, - { - "code": "OMIM:617622", - "display": "JOUBERT SYNDROME 30; JBTS30" - }, - { - "code": "OMIM:617675", - "display": "MYOPATHY, MITOCHONDRIAL, AND ATAXIA; MMYAT" - }, - { - "code": "OMIM:617681", - "display": "BLEPHAROCHEILODONTIC SYNDROME 2; BCDS2" - }, - { - "code": "OMIM:617694", - "display": "AL KAISSI SYNDROME; ALKAS" - }, - { - "code": "OMIM:617781", - "display": "RETINITIS PIGMENTOSA 80; RP80" - }, - { - "code": "OMIM:617805", - "display": "RENAL HYPODYSPLASIA/APLASIA 3; RHDA3" - }, - { - "code": "OMIM:617807", - "display": "NEURODEVELOPMENTAL DISORDER WITH ATAXIC GAIT, ABSENT SPEECH, AND DECREASED CORTICAL WHITE MATTER; NDAGSCW" - }, - { - "code": "OMIM:617829", - "display": "EPILEPTIC ENCEPHALOPATHY, INFANTILE OR EARLY CHILDHOOD, 2; IECEE2" - }, - { - "code": "OMIM:617873", - "display": "COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 35; COXPD35" - }, - { - "code": "OMIM:617948", - "display": "ELLIPTOCYTOSIS 3; EL3" - }, - { - "code": "OMIM:617954", - "display": "MULTIPLE MITOCHONDRIAL DYSFUNCTIONS SYNDROME 6; MMDS6" - }, - { - "code": "OMIM:618056", - "display": "NEURODEVELOPMENTAL DISORDER WITH CEREBELLAR ATROPHY AND WITH OR WITHOUT SEIZURES; NEDCAS" - }, - { - "code": "OMIM:618088", - "display": "NEURODEVELOPMENTAL DISORDER WITH REGRESSION, ABNORMAL MOVEMENTS, LOSS OF SPEECH, AND SEIZURES; NEDAMSS" - }, - { - "code": "OMIM:618129", - "display": "MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL DOMINANT 4; LGMDD4" - }, - { - "code": "OMIM:618138", - "display": "MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 23; LGMDR23" - }, - { - "code": "OMIM:618174", - "display": "CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 9; CDCBM9" - }, - { - "code": "OMIM:618225", - "display": "MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 4; MC1DN4" - }, - { - "code": "OMIM:618273", - "display": "MEGA-CORPUS-CALLOSUM SYNDROME WITH CEREBELLAR HYPOPLASIA AND CORTICAL MALFORMATIONS; MCCCHCM" - }, - { - "code": "OMIM:618316", - "display": "INTELLECTUAL DEVELOPMENTAL DISORDER WITH CARDIAC DEFECTS AND DYSMORPHIC FACIES; IDDCDF" - }, - { - "code": "OMIM:618325", - "display": "LISSENCEPHALY 9 WITH COMPLEX BRAINSTEM MALFORMATION; LIS9" - }, - { - "code": "OMIM:618404", - "display": "LEUKODYSTROPHY, HYPOMYELINATING, 18; HLD18" - }, - { - "code": "OMIM:618512", - "display": "O\\'DONNELL-LURIA-RODAN SYNDROME; ODLURO" - }, - { - "code": "OMIM:614921", - "display": "CONGENITAL DISORDER OF GLYCOSYLATION, TYPE It; CDG1T" - } - ] +{ + "resourceType" : "CodeSystem", + "id" : "omim", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://omim.org/</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">OMIM:613801<a name=\"omim-OMIM.58613801\"> </a></td><td>Retinitis pigmentosa-40</td></tr><tr><td style=\"white-space:nowrap\">OMIM:213300<a name=\"omim-OMIM.58213300\"> </a></td><td>Joubert syndrome 1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615780<a name=\"omim-OMIM.58615780\"> </a></td><td>Retinitis pigmentosa 69</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613826<a name=\"omim-OMIM.58613826\"> </a></td><td>Leber congenital amaurosis 6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:310200<a name=\"omim-OMIM.58310200\"> </a></td><td>Duchenne muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617194<a name=\"omim-OMIM.58617194\"> </a></td><td>Lethal congenital contracture syndrome 11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:105400<a name=\"omim-OMIM.58105400\"> </a></td><td>AMYOTROPHIC LATERAL SCLEROSIS 1; ALS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:108120<a name=\"omim-OMIM.58108120\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, TYPE 1A; DA1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:114300<a name=\"omim-OMIM.58114300\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, TYPE 3; DA3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:115195<a name=\"omim-OMIM.58115195\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 2; CMH2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:115196<a name=\"omim-OMIM.58115196\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 3; CMH3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:115197<a name=\"omim-OMIM.58115197\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 4; CMH4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:115200<a name=\"omim-OMIM.58115200\"> </a></td><td>CARDIOMYOPATHY, DILATED, 1A; CMD1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:117000<a name=\"omim-OMIM.58117000\"> </a></td><td>CENTRAL CORE DISEASE OF MUSCLE; CCD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:117360<a name=\"omim-OMIM.58117360\"> </a></td><td>SPINOCEREBELLAR ATAXIA 29; SCA29</td></tr><tr><td style=\"white-space:nowrap\">OMIM:119530<a name=\"omim-OMIM.58119530\"> </a></td><td>OROFACIAL CLEFT 1; OFC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:122470<a name=\"omim-OMIM.58122470\"> </a></td><td>CORNELIA DE LANGE SYNDROME 1; CDLS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:130600<a name=\"omim-OMIM.58130600\"> </a></td><td>ELLIPTOCYTOSIS 2; EL2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:135900<a name=\"omim-OMIM.58135900\"> </a></td><td>COFFIN-SIRIS SYNDROME 1; CSS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:136140<a name=\"omim-OMIM.58136140\"> </a></td><td>FLOATING-HARBOR SYNDROME; FLHS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:137920<a name=\"omim-OMIM.58137920\"> </a></td><td>RENAL CYSTS AND DIABETES SYNDROME; RCAD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:139090<a name=\"omim-OMIM.58139090\"> </a></td><td>GRAY PLATELET SYNDROME; GPS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:139210<a name=\"omim-OMIM.58139210\"> </a></td><td>MYHRE SYNDROME; MYHRS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:143095<a name=\"omim-OMIM.58143095\"> </a></td><td>SPONDYLOEPIPHYSEAL DYSPLASIA WITH CONGENITAL JOINT DISLOCATIONS; SEDCJD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:143465<a name=\"omim-OMIM.58143465\"> </a></td><td>ATTENTION DEFICIT-HYPERACTIVITY DISORDER; ADHD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:147891<a name=\"omim-OMIM.58147891\"> </a></td><td>ISCHIOCOXOPODOPATELLAR SYNDROME WITH OR WITHOUT PULMONARY ARTERIAL HYPERTENSION; ICPPS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:147920<a name=\"omim-OMIM.58147920\"> </a></td><td>KABUKI SYNDROME 1; KABUK1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:148050<a name=\"omim-OMIM.58148050\"> </a></td><td>KBG SYNDROME; KBGS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:149400<a name=\"omim-OMIM.58149400\"> </a></td><td>HYPEREKPLEXIA 1; HKPX1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:152950<a name=\"omim-OMIM.58152950\"> </a></td><td>MICROCEPHALY WITH OR WITHOUT CHORIORETINOPATHY, LYMPHEDEMA, OR MENTAL RETARDATION; MCLMR</td></tr><tr><td style=\"white-space:nowrap\">OMIM:153670<a name=\"omim-OMIM.58153670\"> </a></td><td>BERNARD-SOULIER SYNDROME, TYPE A2, AUTOSOMAL DOMINANT; BSSA2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:154400<a name=\"omim-OMIM.58154400\"> </a></td><td>ACROFACIAL DYSOSTOSIS 1, NAGER TYPE; AFD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:154700<a name=\"omim-OMIM.58154700\"> </a></td><td>MARFAN SYNDROME; MFS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:155310<a name=\"omim-OMIM.58155310\"> </a></td><td>VISCERAL MYOPATHY; VSCM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:158590<a name=\"omim-OMIM.58158590\"> </a></td><td>NEURONOPATHY, DISTAL HEREDITARY MOTOR, TYPE IIA; HMN2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:158810<a name=\"omim-OMIM.58158810\"> </a></td><td>BETHLEM MYOPATHY 1; BTHLM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:159550<a name=\"omim-OMIM.58159550\"> </a></td><td>ATAXIA-PANCYTOPENIA SYNDROME; ATXPC</td></tr><tr><td style=\"white-space:nowrap\">OMIM:160150<a name=\"omim-OMIM.58160150\"> </a></td><td>MYOPATHY, CENTRONUCLEAR, 1; CNM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:160500<a name=\"omim-OMIM.58160500\"> </a></td><td>MYOPATHY, DISTAL, 1; MPD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:160800<a name=\"omim-OMIM.58160800\"> </a></td><td>MYOTONIA CONGENITA, AUTOSOMAL DOMINANT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:160900<a name=\"omim-OMIM.58160900\"> </a></td><td>MYOTONIC DYSTROPHY 1; DM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:161800<a name=\"omim-OMIM.58161800\"> </a></td><td>NEMALINE MYOPATHY 3; NEM3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:163950<a name=\"omim-OMIM.58163950\"> </a></td><td>NOONAN SYNDROME 1; NS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:178110<a name=\"omim-OMIM.58178110\"> </a></td><td>CONTRACTURES, PTERYGIA, AND SPONDYLOCARPOTARSAL FUSION SYNDROME 1A; CPSFS1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:178500<a name=\"omim-OMIM.58178500\"> </a></td><td>PULMONARY FIBROSIS, IDIOPATHIC; IPF</td></tr><tr><td style=\"white-space:nowrap\">OMIM:180100<a name=\"omim-OMIM.58180100\"> </a></td><td>RETINITIS PIGMENTOSA 1; RP1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:180849<a name=\"omim-OMIM.58180849\"> </a></td><td>RUBINSTEIN-TAYBI SYNDROME 1; RSTS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:181430<a name=\"omim-OMIM.58181430\"> </a></td><td>SCAPULOPERONEAL MYOPATHY, MYH7-RELATED; SPMM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:182601<a name=\"omim-OMIM.58182601\"> </a></td><td>SPASTIC PARAPLEGIA 4, AUTOSOMAL DOMINANT; SPG4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:188000<a name=\"omim-OMIM.58188000\"> </a></td><td>THROMBOCYTOPENIA 2; THC2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:191480<a name=\"omim-OMIM.58191480\"> </a></td><td>UNCOMBABLE HAIR SYNDROME 1; UHS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:203800<a name=\"omim-OMIM.58203800\"> </a></td><td>ALSTROM SYNDROME; ALMS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:204200<a name=\"omim-OMIM.58204200\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 3; CLN3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:204500<a name=\"omim-OMIM.58204500\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 2; CLN2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:205100<a name=\"omim-OMIM.58205100\"> </a></td><td>AMYOTROPHIC LATERAL SCLEROSIS 2, JUVENILE; ALS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:206900<a name=\"omim-OMIM.58206900\"> </a></td><td>MICROPHTHALMIA, SYNDROMIC 3; MCOPS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:208900<a name=\"omim-OMIM.58208900\"> </a></td><td>ATAXIA-TELANGIECTASIA; AT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:209850<a name=\"omim-OMIM.58209850\"> </a></td><td>AUTISM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:209900<a name=\"omim-OMIM.58209900\"> </a></td><td>BARDET-BIEDL SYNDROME 1; BBS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:210000<a name=\"omim-OMIM.58210000\"> </a></td><td>BEHR SYNDROME; BEHRS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:210720<a name=\"omim-OMIM.58210720\"> </a></td><td>MICROCEPHALIC OSTEODYSPLASTIC PRIMORDIAL DWARFISM, TYPE II; MOPD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:210900<a name=\"omim-OMIM.58210900\"> </a></td><td>BLOOM SYNDROME; BLM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:212065<a name=\"omim-OMIM.58212065\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ia; CDG1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:212066<a name=\"omim-OMIM.58212066\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIa; CDG2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:214500<a name=\"omim-OMIM.58214500\"> </a></td><td>CHEDIAK-HIGASHI SYNDROME; CHS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:214800<a name=\"omim-OMIM.58214800\"> </a></td><td>CHARGE SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:215500<a name=\"omim-OMIM.58215500\"> </a></td><td>CHOROIDAL DYSTROPHY, CENTRAL AREOLAR, 1; CACD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:216400<a name=\"omim-OMIM.58216400\"> </a></td><td>COCKAYNE SYNDROME A; CSA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:216550<a name=\"omim-OMIM.58216550\"> </a></td><td>COHEN SYNDROME; COH1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:217080<a name=\"omim-OMIM.58217080\"> </a></td><td>JALILI SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:217980<a name=\"omim-OMIM.58217980\"> </a></td><td>CORPUS CALLOSUM, AGENESIS OF, WITH FACIAL ANOMALIES AND ROBIN SEQUENCE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:218340<a name=\"omim-OMIM.58218340\"> </a></td><td>TEMTAMY SYNDROME; TEMTYS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:219200<a name=\"omim-OMIM.58219200\"> </a></td><td>CUTIS LAXA, AUTOSOMAL RECESSIVE, TYPE IIA; ARCL2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:224050<a name=\"omim-OMIM.58224050\"> </a></td><td>CEREBELLAR ATAXIA, MENTAL RETARDATION, AND DYSEQUILIBRIUM SYNDROME 1; CAMRQ1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:224690<a name=\"omim-OMIM.58224690\"> </a></td><td>MEIER-GORLIN SYNDROME 1; MGORS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:225753<a name=\"omim-OMIM.58225753\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 4; PCH4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:225790<a name=\"omim-OMIM.58225790\"> </a></td><td>PROLIFERATIVE VASCULOPATHY AND HYDRANENCEPHALY-HYDROCEPHALY SYNDROME; PVHH</td></tr><tr><td style=\"white-space:nowrap\">OMIM:227650<a name=\"omim-OMIM.58227650\"> </a></td><td>FANCONI ANEMIA, COMPLEMENTATION GROUP A; FANCA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:229600<a name=\"omim-OMIM.58229600\"> </a></td><td>FRUCTOSE INTOLERANCE, HEREDITARY; HFI</td></tr><tr><td style=\"white-space:nowrap\">OMIM:230000<a name=\"omim-OMIM.58230000\"> </a></td><td>FUCOSIDOSIS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:230500<a name=\"omim-OMIM.58230500\"> </a></td><td>GM1-GANGLIOSIDOSIS, TYPE I</td></tr><tr><td style=\"white-space:nowrap\">OMIM:232300<a name=\"omim-OMIM.58232300\"> </a></td><td>GLYCOGEN STORAGE DISEASE II; GSD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:232600<a name=\"omim-OMIM.58232600\"> </a></td><td>GLYCOGEN STORAGE DISEASE V; GSD5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:234200<a name=\"omim-OMIM.58234200\"> </a></td><td>NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 1; NBIA1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:234500<a name=\"omim-OMIM.58234500\"> </a></td><td>HARTNUP DISORDER; HND</td></tr><tr><td style=\"white-space:nowrap\">OMIM:236000<a name=\"omim-OMIM.58236000\"> </a></td><td>LYMPHOMA, HODGKIN, CLASSIC; CHL</td></tr><tr><td style=\"white-space:nowrap\">OMIM:236600<a name=\"omim-OMIM.58236600\"> </a></td><td>HYDROCEPHALUS, CONGENITAL, 1; HYC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:236792<a name=\"omim-OMIM.58236792\"> </a></td><td>L-2-HYDROXYGLUTARIC ACIDURIA; L2HGA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:243310<a name=\"omim-OMIM.58243310\"> </a></td><td>BARAITSER-WINTER SYNDROME 1; BRWS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:244450<a name=\"omim-OMIM.58244450\"> </a></td><td>KAUFMAN OCULOCEREBROFACIAL SYNDROME; KOS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:245200<a name=\"omim-OMIM.58245200\"> </a></td><td>KRABBE DISEASE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:245359<a name=\"omim-OMIM.58245359\"> </a></td><td>missing</td></tr><tr><td style=\"white-space:nowrap\">OMIM:248200<a name=\"omim-OMIM.58248200\"> </a></td><td>STARGARDT DISEASE 1; STGD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:248700<a name=\"omim-OMIM.58248700\"> </a></td><td>MARDEN-WALKER SYNDROME; MWKS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:249000<a name=\"omim-OMIM.58249000\"> </a></td><td>MECKEL SYNDROME, TYPE 1; MKS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:249900<a name=\"omim-OMIM.58249900\"> </a></td><td>METACHROMATIC LEUKODYSTROPHY DUE TO SAPOSIN B DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:250100<a name=\"omim-OMIM.58250100\"> </a></td><td>METACHROMATIC LEUKODYSTROPHY; MLD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:250620<a name=\"omim-OMIM.58250620\"> </a></td><td>3-HYDROXYISOBUTYRYL-CoA HYDROLASE DEFICIENCY; HIBCHD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251200<a name=\"omim-OMIM.58251200\"> </a></td><td>MICROCEPHALY 1, PRIMARY, AUTOSOMAL RECESSIVE; MCPH1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251260<a name=\"omim-OMIM.58251260\"> </a></td><td>NIJMEGEN BREAKAGE SYNDROME; NBS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251280<a name=\"omim-OMIM.58251280\"> </a></td><td>DIENCEPHALIC-MESENCEPHALIC JUNCTION DYSPLASIA SYNDROME 1; DMJDS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251290<a name=\"omim-OMIM.58251290\"> </a></td><td>PSEUDO-TORCH SYNDROME 1; PTORCH1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251300<a name=\"omim-OMIM.58251300\"> </a></td><td>GALLOWAY-MOWAT SYNDROME 1; GAMOS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:252010<a name=\"omim-OMIM.58252010\"> </a></td><td>MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 1; MC1DN1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:252160<a name=\"omim-OMIM.58252160\"> </a></td><td>MOLYBDENUM COFACTOR DEFICIENCY, COMPLEMENTATION GROUP B; MOCODB</td></tr><tr><td style=\"white-space:nowrap\">OMIM:252920<a name=\"omim-OMIM.58252920\"> </a></td><td>MUCOPOLYSACCHARIDOSIS, TYPE IIIB; MPS3B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:253250<a name=\"omim-OMIM.58253250\"> </a></td><td>MULIBREY NANISM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:253600<a name=\"omim-OMIM.58253600\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 1; LGMDR1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:253601<a name=\"omim-OMIM.58253601\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 2; LGMDR2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:253700<a name=\"omim-OMIM.58253700\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 5; LGMDR5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254090<a name=\"omim-OMIM.58254090\"> </a></td><td>ULLRICH CONGENITAL MUSCULAR DYSTROPHY 1; UCMD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254110<a name=\"omim-OMIM.58254110\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 8; LGMDR8</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254300<a name=\"omim-OMIM.58254300\"> </a></td><td>MYASTHENIC SYNDROME, CONGENITAL, 10; CMS10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254780<a name=\"omim-OMIM.58254780\"> </a></td><td>MYOCLONIC EPILEPSY OF LAFORA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254940<a name=\"omim-OMIM.58254940\"> </a></td><td>CAREY-FINEMAN-ZITER SYNDROME; CFZS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:255310<a name=\"omim-OMIM.58255310\"> </a></td><td>MYOPATHY, CONGENITAL, WITH FIBER-TYPE DISPROPORTION; CFTD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:255320<a name=\"omim-OMIM.58255320\"> </a></td><td>MINICORE MYOPATHY WITH EXTERNAL OPHTHALMOPLEGIA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:255800<a name=\"omim-OMIM.58255800\"> </a></td><td>SCHWARTZ-JAMPEL SYNDROME, TYPE 1; SJS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256000<a name=\"omim-OMIM.58256000\"> </a></td><td>LEIGH SYNDROME; LS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256300<a name=\"omim-OMIM.58256300\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 1; NPHS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256600<a name=\"omim-OMIM.58256600\"> </a></td><td>NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 2A; NBIA2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256700<a name=\"omim-OMIM.58256700\"> </a></td><td>NEUROBLASTOMA, SUSCEPTIBILITY TO, 1; NBLST1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256730<a name=\"omim-OMIM.58256730\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 1; CLN1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256731<a name=\"omim-OMIM.58256731\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 5; CLN5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256800<a name=\"omim-OMIM.58256800\"> </a></td><td>INSENSITIVITY TO PAIN, CONGENITAL, WITH ANHIDROSIS; CIPA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256850<a name=\"omim-OMIM.58256850\"> </a></td><td>GIANT AXONAL NEUROPATHY 1, AUTOSOMAL RECESSIVE; GAN1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:257220<a name=\"omim-OMIM.58257220\"> </a></td><td>NIEMANN-PICK DISEASE, TYPE C1; NPC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:257320<a name=\"omim-OMIM.58257320\"> </a></td><td>LISSENCEPHALY 2; LIS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:260400<a name=\"omim-OMIM.58260400\"> </a></td><td>SHWACHMAN-DIAMOND SYNDROME 1; SDS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:260565<a name=\"omim-OMIM.58260565\"> </a></td><td>PEHO SYNDROME; PEHO</td></tr><tr><td style=\"white-space:nowrap\">OMIM:261630<a name=\"omim-OMIM.58261630\"> </a></td><td>HYPERPHENYLALANINEMIA, BH4-DEFICIENT, C; HPABH4C</td></tr><tr><td style=\"white-space:nowrap\">OMIM:262500<a name=\"omim-OMIM.58262500\"> </a></td><td>LARON SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:263200<a name=\"omim-OMIM.58263200\"> </a></td><td>POLYCYSTIC KIDNEY DISEASE 4 WITH OR WITHOUT POLYCYSTIC LIVER DISEASE; PKD4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:265000<a name=\"omim-OMIM.58265000\"> </a></td><td>MULTIPLE PTERYGIUM SYNDROME, ESCOBAR VARIANT; EVMPS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:266100<a name=\"omim-OMIM.58266100\"> </a></td><td>EPILEPSY, PYRIDOXINE-DEPENDENT; EPD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:266265<a name=\"omim-OMIM.58266265\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIc; CDG2C</td></tr><tr><td style=\"white-space:nowrap\">OMIM:266500<a name=\"omim-OMIM.58266500\"> </a></td><td>REFSUM DISEASE, CLASSIC</td></tr><tr><td style=\"white-space:nowrap\">OMIM:266510<a name=\"omim-OMIM.58266510\"> </a></td><td>PEROXISOME BIOGENESIS DISORDER 3B; PBD3B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:268800<a name=\"omim-OMIM.58268800\"> </a></td><td>SANDHOFF DISEASE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:270200<a name=\"omim-OMIM.58270200\"> </a></td><td>SJOGREN-LARSSON SYNDROME; SLS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:270800<a name=\"omim-OMIM.58270800\"> </a></td><td>SPASTIC PARAPLEGIA 5A, AUTOSOMAL RECESSIVE; SPG5A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:271900<a name=\"omim-OMIM.58271900\"> </a></td><td>CANAVAN DISEASE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:272800<a name=\"omim-OMIM.58272800\"> </a></td><td>TAY-SACHS DISEASE; TSD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:273300<a name=\"omim-OMIM.58273300\"> </a></td><td>TESTICULAR GERM CELL TUMOR; TGCT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:274000<a name=\"omim-OMIM.58274000\"> </a></td><td>THROMBOCYTOPENIA-ABSENT RADIUS SYNDROME; TAR</td></tr><tr><td style=\"white-space:nowrap\">OMIM:276901<a name=\"omim-OMIM.58276901\"> </a></td><td>USHER SYNDROME, TYPE IIA; USH2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:277470<a name=\"omim-OMIM.58277470\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 2A; PCH2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300029<a name=\"omim-OMIM.58300029\"> </a></td><td>RETINITIS PIGMENTOSA 3; RP3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300067<a name=\"omim-OMIM.58300067\"> </a></td><td>LISSENCEPHALY, X-LINKED, 1; LISX1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300088<a name=\"omim-OMIM.58300088\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 9; DEE9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300100<a name=\"omim-OMIM.58300100\"> </a></td><td>ADRENOLEUKODYSTROPHY; ALD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300376<a name=\"omim-OMIM.58300376\"> </a></td><td>MUSCULAR DYSTROPHY, BECKER TYPE; BMD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300387<a name=\"omim-OMIM.58300387\"> </a></td><td>MENTAL RETARDATION, X-LINKED 63; MRX63</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300476<a name=\"omim-OMIM.58300476\"> </a></td><td>CONE-ROD DYSTROPHY, X-LINKED, 3; CORDX3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300486<a name=\"omim-OMIM.58300486\"> </a></td><td>MENTAL RETARDATION, X-LINKED, WITH CEREBELLAR HYPOPLASIA AND DISTINCTIVE FACIAL APPEARANCE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300495<a name=\"omim-OMIM.58300495\"> </a></td><td>AUTISM, SUSCEPTIBILITY TO, X-LINKED 2; AUTSX2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300523<a name=\"omim-OMIM.58300523\"> </a></td><td>ALLAN-HERNDON-DUDLEY SYNDROME; AHDS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300534<a name=\"omim-OMIM.58300534\"> </a></td><td>MENTAL RETARDATION, X-LINKED, SYNDROMIC, CLAES-JENSEN TYPE; MRXSCJ</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300695<a name=\"omim-OMIM.58300695\"> </a></td><td>SCAPULOPERONEAL MYOPATHY, X-LINKED DOMINANT; SPM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300749<a name=\"omim-OMIM.58300749\"> </a></td><td>MENTAL RETARDATION AND MICROCEPHALY WITH PONTINE AND CEREBELLAR HYPOPLASIA; MICPCH</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300804<a name=\"omim-OMIM.58300804\"> </a></td><td>JOUBERT SYNDROME 10; JBTS10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300881<a name=\"omim-OMIM.58300881\"> </a></td><td>MOVED TO 615777</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300882<a name=\"omim-OMIM.58300882\"> </a></td><td>CORNELIA DE LANGE SYNDROME 5; CDLS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300894<a name=\"omim-OMIM.58300894\"> </a></td><td>NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 5; NBIA5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300908<a name=\"omim-OMIM.58300908\"> </a></td><td>ANEMIA, NONSPHEROCYTIC HEMOLYTIC, DUE TO G6PD DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300957<a name=\"omim-OMIM.58300957\"> </a></td><td>MENTAL RETARDATION, X-LINKED 12; MRX12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300958<a name=\"omim-OMIM.58300958\"> </a></td><td>INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED, SYNDROMIC, SNIJDERS BLOK TYPE; MRXSSB</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300966<a name=\"omim-OMIM.58300966\"> </a></td><td>MENTAL RETARDATION, X-LINKED, SYNDROMIC 33; MRXS33</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300968<a name=\"omim-OMIM.58300968\"> </a></td><td>MENTAL RETARDATION, X-LINKED 99, SYNDROMIC, FEMALE-RESTRICTED; MRXS99F</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300983<a name=\"omim-OMIM.58300983\"> </a></td><td>MENTAL RETARDATION, X-LINKED 104; MRX104</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300986<a name=\"omim-OMIM.58300986\"> </a></td><td>MENTAL RETARDATION, X-LINKED, SYNDROMIC, BAIN TYPE; MRXSB</td></tr><tr><td style=\"white-space:nowrap\">OMIM:301050<a name=\"omim-OMIM.58301050\"> </a></td><td>ALPORT SYNDROME 1, X-LINKED; ATS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:301310<a name=\"omim-OMIM.58301310\"> </a></td><td>ANEMIA, SIDEROBLASTIC, AND SPINOCEREBELLAR ATAXIA; ASAT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:304340<a name=\"omim-OMIM.58304340\"> </a></td><td>PETTIGREW SYNDROME; PGS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:305100<a name=\"omim-OMIM.58305100\"> </a></td><td>ECTODERMAL DYSPLASIA 1, HYPOHIDROTIC, X-LINKED; XHED</td></tr><tr><td style=\"white-space:nowrap\">OMIM:308350<a name=\"omim-OMIM.58308350\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 1; DEE1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:309500<a name=\"omim-OMIM.58309500\"> </a></td><td>RENPENNING SYNDROME 1; RENS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:309541<a name=\"omim-OMIM.58309541\"> </a></td><td>METHYLMALONIC ACIDEMIA AND HOMOCYSTEINEMIA, cblX TYPE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:309580<a name=\"omim-OMIM.58309580\"> </a></td><td>MENTAL RETARDATION-HYPOTONIC FACIES SYNDROME, X-LINKED, 1; MRXHF1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:310468<a name=\"omim-OMIM.58310468\"> </a></td><td>NEPHROLITHIASIS, X-LINKED RECESSIVE, WITH RENAL FAILURE; XRN</td></tr><tr><td style=\"white-space:nowrap\">OMIM:311070<a name=\"omim-OMIM.58311070\"> </a></td><td>CHARCOT-MARIE-TOOTH DISEASE, X-LINKED RECESSIVE, 5; CMTX5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:313850<a name=\"omim-OMIM.58313850\"> </a></td><td>THORACOABDOMINAL SYNDROME; THAS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:314580<a name=\"omim-OMIM.58314580\"> </a></td><td>WIEACKER-WOLFF SYNDROME; WRWF</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600059<a name=\"omim-OMIM.58600059\"> </a></td><td>RETINITIS PIGMENTOSA 13; RP13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600105<a name=\"omim-OMIM.58600105\"> </a></td><td>RETINITIS PIGMENTOSA 12; RP12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600118<a name=\"omim-OMIM.58600118\"> </a></td><td>WARBURG MICRO SYNDROME 1; WARBM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600132<a name=\"omim-OMIM.58600132\"> </a></td><td>RETINITIS PIGMENTOSA 14; RP14</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600138<a name=\"omim-OMIM.58600138\"> </a></td><td>RETINITIS PIGMENTOSA 11; RP11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600143<a name=\"omim-OMIM.58600143\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 8; CLN8</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600334<a name=\"omim-OMIM.58600334\"> </a></td><td>TIBIAL MUSCULAR DYSTROPHY, TARDIVE; TMD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600373<a name=\"omim-OMIM.58600373\"> </a></td><td>CODAS SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600618<a name=\"omim-OMIM.58600618\"> </a></td><td>ETS VARIANT GENE 6; ETV6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600995<a name=\"omim-OMIM.58600995\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 2; NPHS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601088<a name=\"omim-OMIM.58601088\"> </a></td><td>AYME-GRIPP SYNDROME; AYGRP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601414<a name=\"omim-OMIM.58601414\"> </a></td><td>RETINITIS PIGMENTOSA 18; RP18</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601419<a name=\"omim-OMIM.58601419\"> </a></td><td>MYOPATHY, MYOFIBRILLAR, 1; MFM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601680<a name=\"omim-OMIM.58601680\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, TYPE 2B1; DA2B1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601718<a name=\"omim-OMIM.58601718\"> </a></td><td>RETINITIS PIGMENTOSA 19; RP19</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601780<a name=\"omim-OMIM.58601780\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 6; CLN6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601815<a name=\"omim-OMIM.58601815\"> </a></td><td>PHOSPHOGLYCERATE DEHYDROGENASE DEFICIENCY; PHGDHD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601954<a name=\"omim-OMIM.58601954\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 7; LGMDR7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:602482<a name=\"omim-OMIM.58602482\"> </a></td><td>AXENFELD-RIEGER SYNDROME, TYPE 3; RIEG3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:602579<a name=\"omim-OMIM.58602579\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ib; CDG1B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:602772<a name=\"omim-OMIM.58602772\"> </a></td><td>RETINITIS PIGMENTOSA 25; RP25</td></tr><tr><td style=\"white-space:nowrap\">OMIM:603511<a name=\"omim-OMIM.58603511\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL DOMINANT 1; LGMDD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:603896<a name=\"omim-OMIM.58603896\"> </a></td><td>LEUKOENCEPHALOPATHY WITH VANISHING WHITE MATTER; VWM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604004<a name=\"omim-OMIM.58604004\"> </a></td><td>MEGALENCEPHALIC LEUKOENCEPHALOPATHY WITH SUBCORTICAL CYSTS 1; MLC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604116<a name=\"omim-OMIM.58604116\"> </a></td><td>CONE-ROD DYSTROPHY 3; CORD3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604273<a name=\"omim-OMIM.58604273\"> </a></td><td>MITOCHONDRIAL COMPLEX V (ATP SYNTHASE) DEFICIENCY, NUCLEAR TYPE 1; MC5DN1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604286<a name=\"omim-OMIM.58604286\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 4; LGMDR4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604317<a name=\"omim-OMIM.58604317\"> </a></td><td>MICROCEPHALY 2, PRIMARY, AUTOSOMAL RECESSIVE, WITH OR WITHOUT CORTICAL MALFORMATIONS; MCPH2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604360<a name=\"omim-OMIM.58604360\"> </a></td><td>SPASTIC PARAPLEGIA 11, AUTOSOMAL RECESSIVE; SPG11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604387<a name=\"omim-OMIM.58604387\"> </a></td><td>NEPHRONOPHTHISIS 3; NPHP3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604537<a name=\"omim-OMIM.58604537\"> </a></td><td>LEBER CONGENITAL AMAUROSIS 5; LCA5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604592<a name=\"omim-OMIM.58604592\"> </a></td><td>T CELL IMMUNE REGULATOR 1; TCIRG1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605130<a name=\"omim-OMIM.58605130\"> </a></td><td>WIEDEMANN-STEINER SYNDROME; WDSTS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605355<a name=\"omim-OMIM.58605355\"> </a></td><td>NEMALINE MYOPATHY 5; NEM5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605407<a name=\"omim-OMIM.58605407\"> </a></td><td>SEGAWA SYNDROME, AUTOSOMAL RECESSIVE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605637<a name=\"omim-OMIM.58605637\"> </a></td><td>MYOPATHY, PROXIMAL, WITH OPHTHALMOPLEGIA; MYPOP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605670<a name=\"omim-OMIM.58605670\"> </a></td><td>LATE-ONSET RETINAL DEGENERATION; LORD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605820<a name=\"omim-OMIM.58605820\"> </a></td><td>NONAKA MYOPATHY; NM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605899<a name=\"omim-OMIM.58605899\"> </a></td><td>GLYCINE ENCEPHALOPATHY; GCE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606068<a name=\"omim-OMIM.58606068\"> </a></td><td>RETINITIS PIGMENTOSA 28; RP28</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606170<a name=\"omim-OMIM.58606170\"> </a></td><td>GENITOPATELLAR SYNDROME; GTPTS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606232<a name=\"omim-OMIM.58606232\"> </a></td><td>PHELAN-MCDERMID SYNDROME; PHMDS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606777<a name=\"omim-OMIM.58606777\"> </a></td><td>GLUT1 DEFICIENCY SYNDROME 1; GLUT1DS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606854<a name=\"omim-OMIM.58606854\"> </a></td><td>POLYMICROGYRIA, BILATERAL FRONTOPARIETAL; BFPP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606966<a name=\"omim-OMIM.58606966\"> </a></td><td>NEPHRONOPHTHISIS 4; NPHP4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606996<a name=\"omim-OMIM.58606996\"> </a></td><td>SENIOR-LOKEN SYNDROME 4; SLSN4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607015<a name=\"omim-OMIM.58607015\"> </a></td><td>HURLER-SCHEIE SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607155<a name=\"omim-OMIM.58607155\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 5; MDDGC5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607196<a name=\"omim-OMIM.58607196\"> </a></td><td>MICROCEPHALY, AMISH TYPE; MCPHA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607225<a name=\"omim-OMIM.58607225\"> </a></td><td>SPASTIC PARALYSIS, INFANTILE-ONSET ASCENDING; IAHSP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607426<a name=\"omim-OMIM.58607426\"> </a></td><td>COENZYME Q10 DEFICIENCY, PRIMARY, 1; COQ10D1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607432<a name=\"omim-OMIM.58607432\"> </a></td><td>LISSENCEPHALY 1; LIS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607483<a name=\"omim-OMIM.58607483\"> </a></td><td>THIAMINE METABOLISM DYSFUNCTION SYNDROME 2 (BIOTIN- OR THIAMINE-RESPONSIVE TYPE); THMD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607595<a name=\"omim-OMIM.58607595\"> </a></td><td>MOVED TO 175780</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607596<a name=\"omim-OMIM.58607596\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 1A; PCH1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607855<a name=\"omim-OMIM.58607855\"> </a></td><td>MUSCULAR DYSTROPHY, CONGENITAL MEROSIN-DEFICIENT, 1A; MDC1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608027<a name=\"omim-OMIM.58608027\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 3; PCH3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608091<a name=\"omim-OMIM.58608091\"> </a></td><td>JOUBERT SYNDROME 2; JBTS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608099<a name=\"omim-OMIM.58608099\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 3; LGMDR3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608133<a name=\"omim-OMIM.58608133\"> </a></td><td>RETINITIS PIGMENTOSA 7; RP7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608358<a name=\"omim-OMIM.58608358\"> </a></td><td>MYOPATHY, MYOSIN STORAGE, AUTOSOMAL DOMINANT; MSMA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608380<a name=\"omim-OMIM.58608380\"> </a></td><td>RETINITIS PIGMENTOSA 26; RP26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608393<a name=\"omim-OMIM.58608393\"> </a></td><td>MICROCEPHALY 6, PRIMARY, AUTOSOMAL RECESSIVE; MCPH6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608415<a name=\"omim-OMIM.58608415\"> </a></td><td>PROLONGED ELECTRORETINAL RESPONSE SUPPRESSION; PERRS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608423<a name=\"omim-OMIM.58608423\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL DOMINANT 2; LGMDD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608540<a name=\"omim-OMIM.58608540\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ik; CDG1K</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608629<a name=\"omim-OMIM.58608629\"> </a></td><td>JOUBERT SYNDROME 3; JBTS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608643<a name=\"omim-OMIM.58608643\"> </a></td><td>AROMATIC L-AMINO ACID DECARBOXYLASE DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608716<a name=\"omim-OMIM.58608716\"> </a></td><td>MICROCEPHALY 5, PRIMARY, AUTOSOMAL RECESSIVE; MCPH5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608804<a name=\"omim-OMIM.58608804\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 2; HLD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608807<a name=\"omim-OMIM.58608807\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 10; LGMDR10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609033<a name=\"omim-OMIM.58609033\"> </a></td><td>POSTERIOR COLUMN ATAXIA WITH RETINITIS PIGMENTOSA; AXPC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609056<a name=\"omim-OMIM.58609056\"> </a></td><td>SALT AND PEPPER DEVELOPMENTAL REGRESSION SYNDROME; SPDRS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609195<a name=\"omim-OMIM.58609195\"> </a></td><td>SPASTIC PARAPLEGIA 26, AUTOSOMAL RECESSIVE; SPG26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609200<a name=\"omim-OMIM.58609200\"> </a></td><td>MYOPATHY, MYOFIBRILLAR, 3; MFM3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609260<a name=\"omim-OMIM.58609260\"> </a></td><td>CHARCOT-MARIE-TOOTH DISEASE, AXONAL, AUTOSOMAL DOMINANT, TYPE 2A2A; CMT2A2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609270<a name=\"omim-OMIM.58609270\"> </a></td><td>SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 7; SCAR7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609304<a name=\"omim-OMIM.58609304\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 3; DEE3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609524<a name=\"omim-OMIM.58609524\"> </a></td><td>MYOPATHY, MYOFIBRILLAR, 5; MFM5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609560<a name=\"omim-OMIM.58609560\"> </a></td><td>MITOCHONDRIAL DNA DEPLETION SYNDROME 2 (MYOPATHIC TYPE); MTDPS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609923<a name=\"omim-OMIM.58609923\"> </a></td><td>RETINITIS PIGMENTOSA 31; RP31</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610019<a name=\"omim-OMIM.58610019\"> </a></td><td>CATARACT 18; CTRCT18</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610031<a name=\"omim-OMIM.58610031\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 7; CDCBM7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610127<a name=\"omim-OMIM.58610127\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 10; CLN10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610181<a name=\"omim-OMIM.58610181\"> </a></td><td>AICARDI-GOUTIERES SYNDROME 2; AGS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610188<a name=\"omim-OMIM.58610188\"> </a></td><td>JOUBERT SYNDROME 5; JBTS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610217<a name=\"omim-OMIM.58610217\"> </a></td><td>NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 2B; NBIA2B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610329<a name=\"omim-OMIM.58610329\"> </a></td><td>AICARDI-GOUTIERES SYNDROME 3; AGS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610333<a name=\"omim-OMIM.58610333\"> </a></td><td>AICARDI-GOUTIERES SYNDROME 4; AGS4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610359<a name=\"omim-OMIM.58610359\"> </a></td><td>RETINITIS PIGMENTOSA 33; RP33</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610443<a name=\"omim-OMIM.58610443\"> </a></td><td>KOOLEN-DE VRIES SYNDROME; KDVS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610444<a name=\"omim-OMIM.58610444\"> </a></td><td>NIGHT BLINDNESS, CONGENITAL STATIONARY, AUTOSOMAL DOMINANT 3; CSNBAD3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610489<a name=\"omim-OMIM.58610489\"> </a></td><td>PIGMENTED NODULAR ADRENOCORTICAL DISEASE, PRIMARY, 1; PPNAD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610532<a name=\"omim-OMIM.58610532\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 5; HLD5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610688<a name=\"omim-OMIM.58610688\"> </a></td><td>JOUBERT SYNDROME 6; JBTS6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610725<a name=\"omim-OMIM.58610725\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 3; NPHS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610951<a name=\"omim-OMIM.58610951\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 7; CLN7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611091<a name=\"omim-OMIM.58611091\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL RECESSIVE 5; MRT5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611302<a name=\"omim-OMIM.58611302\"> </a></td><td>SPASTIC ATAXIA 2, AUTOSOMAL RECESSIVE; SPAX2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611307<a name=\"omim-OMIM.58611307\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 12; LGMDR12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611560<a name=\"omim-OMIM.58611560\"> </a></td><td>JOUBERT SYNDROME 7; JBTS7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611603<a name=\"omim-OMIM.58611603\"> </a></td><td>LISSENCEPHALY 3; LIS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611705<a name=\"omim-OMIM.58611705\"> </a></td><td>SALIH MYOPATHY; SALMY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611721<a name=\"omim-OMIM.58611721\"> </a></td><td>COMBINED SAPOSIN DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611726<a name=\"omim-OMIM.58611726\"> </a></td><td>EPILEPSY, PROGRESSIVE MYOCLONIC, 3, WITH OR WITHOUT INTRACELLULAR INCLUSIONS; EPM3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611755<a name=\"omim-OMIM.58611755\"> </a></td><td>LEBER CONGENITAL AMAUROSIS 10; LCA10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612015<a name=\"omim-OMIM.58612015\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE In; CDG1N</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612095<a name=\"omim-OMIM.58612095\"> </a></td><td>RETINITIS PIGMENTOSA 41; RP41</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612126<a name=\"omim-OMIM.58612126\"> </a></td><td>GLUT1 DEFICIENCY SYNDROME 2; GLUT1DS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612285<a name=\"omim-OMIM.58612285\"> </a></td><td>JOUBERT SYNDROME 9; JBTS9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612337<a name=\"omim-OMIM.58612337\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 22; MRD22</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612370<a name=\"omim-OMIM.58612370\"> </a></td><td>HYPOGONADOTROPIC HYPOGONADISM 5 WITH OR WITHOUT ANOSMIA; HH5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612438<a name=\"omim-OMIM.58612438\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 6; HLD6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612528<a name=\"omim-OMIM.58612528\"> </a></td><td>DIAMOND-BLACKFAN ANEMIA 5; DBA5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612621<a name=\"omim-OMIM.58612621\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 5; MRD5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612712<a name=\"omim-OMIM.58612712\"> </a></td><td>LEBER CONGENITAL AMAUROSIS 13; LCA13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612716<a name=\"omim-OMIM.58612716\"> </a></td><td>DYSTONIA, DOPA-RESPONSIVE, DUE TO SEPIAPTERIN REDUCTASE DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612780<a name=\"omim-OMIM.58612780\"> </a></td><td>SEIZURES, SENSORINEURAL DEAFNESS, ATAXIA, MENTAL RETARDATION, AND ELECTROLYTE IMBALANCE; SESAMES</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612936<a name=\"omim-OMIM.58612936\"> </a></td><td>SPASTIC PARAPLEGIA 50, AUTOSOMAL RECESSIVE; SPG50</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612943<a name=\"omim-OMIM.58612943\"> </a></td><td>RETINITIS PIGMENTOSA 42; RP42</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612951<a name=\"omim-OMIM.58612951\"> </a></td><td>LEUKOENCEPHALOPATHY, CYSTIC, WITHOUT MEGALENCEPHALY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613065<a name=\"omim-OMIM.58613065\"> </a></td><td>LEUKEMIA, ACUTE LYMPHOBLASTIC; ALL</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613091<a name=\"omim-OMIM.58613091\"> </a></td><td>SHORT-RIB THORACIC DYSPLASIA 3 WITH OR WITHOUT POLYDACTYLY; SRTD3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613155<a name=\"omim-OMIM.58613155\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH IMPAIRED INTELLECTUAL IMPAIRMENT), TYPE B, 1; MDDGB1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613156<a name=\"omim-OMIM.58613156\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH IMPAIRED INTELLECTUAL DEVELOPMENT), TYPE B, 2; MDDGB2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613158<a name=\"omim-OMIM.58613158\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 2; MDDGC2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613192<a name=\"omim-OMIM.58613192\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL RECESSIVE 13; MRT13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613205<a name=\"omim-OMIM.58613205\"> </a></td><td>MUSCULAR DYSTROPHY, CONGENITAL, LMNA-RELATED</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613216<a name=\"omim-OMIM.58613216\"> </a></td><td>NIGHT BLINDNESS, CONGENITAL STATIONARY, TYPE 1C; CSNB1C</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613217<a name=\"omim-OMIM.58613217\"> </a></td><td>DIARRHEA 5, WITH TUFTING ENTEROPATHY, CONGENITAL; DIAR5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613402<a name=\"omim-OMIM.58613402\"> </a></td><td>MICROCEPHALY, SEIZURES, AND DEVELOPMENTAL DELAY; MCSZ</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613428<a name=\"omim-OMIM.58613428\"> </a></td><td>RETINITIS PIGMENTOSA 54; RP54</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613454<a name=\"omim-OMIM.58613454\"> </a></td><td>RETT SYNDROME, CONGENITAL VARIANT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613550<a name=\"omim-OMIM.58613550\"> </a></td><td>NEPHRONOPHTHISIS 11; NPHP11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613561<a name=\"omim-OMIM.58613561\"> </a></td><td>MYOPATHY, LACTIC ACIDOSIS, AND SIDEROBLASTIC ANEMIA 2; MLASA2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613587<a name=\"omim-OMIM.58613587\"> </a></td><td>OCCULT MACULAR DYSTROPHY; OCMD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613612<a name=\"omim-OMIM.58613612\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIi; CDG2I</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613660<a name=\"omim-OMIM.58613660\"> </a></td><td>CONE-ROD DYSTROPHY 15; CORD15</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613668<a name=\"omim-OMIM.58613668\"> </a></td><td>MICROCEPHALY, POSTNATAL PROGRESSIVE, WITH SEIZURES AND BRAIN ATROPHY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613680<a name=\"omim-OMIM.58613680\"> </a></td><td>BEAULIEU-BOYCOTT-INNES SYNDROME; BBIS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613684<a name=\"omim-OMIM.58613684\"> </a></td><td>RUBINSTEIN-TAYBI SYNDROME 2; RSTS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613690<a name=\"omim-OMIM.58613690\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 7; CMH7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613706<a name=\"omim-OMIM.58613706\"> </a></td><td>NOONAN SYNDROME 7; NS7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613722<a name=\"omim-OMIM.58613722\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 12; DEE12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613731<a name=\"omim-OMIM.58613731\"> </a></td><td>RETINITIS PIGMENTOSA 4; RP4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613744<a name=\"omim-OMIM.58613744\"> </a></td><td>SPASTIC PARAPLEGIA 51, AUTOSOMAL RECESSIVE; SPG51</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613750<a name=\"omim-OMIM.58613750\"> </a></td><td>RETINITIS PIGMENTOSA 27; RP27</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613756<a name=\"omim-OMIM.58613756\"> </a></td><td>RETINITIS PIGMENTOSA 49; RP49</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613767<a name=\"omim-OMIM.58613767\"> </a></td><td>RETINITIS PIGMENTOSA 45; RP45</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613794<a name=\"omim-OMIM.58613794\"> </a></td><td>RETINITIS PIGMENTOSA 20; RP20</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613809<a name=\"omim-OMIM.58613809\"> </a></td><td>RETINITIS PIGMENTOSA 39; RP39</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613810<a name=\"omim-OMIM.58613810\"> </a></td><td>RETINITIS PIGMENTOSA 43; RP43</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613811<a name=\"omim-OMIM.58613811\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 2D; PCH2D</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613820<a name=\"omim-OMIM.58613820\"> </a></td><td>NEPHRONOPHTHISIS 12; NPHP12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613835<a name=\"omim-OMIM.58613835\"> </a></td><td>LEBER CONGENITAL AMAUROSIS 8; LCA8</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613861<a name=\"omim-OMIM.58613861\"> </a></td><td>RETINITIS PIGMENTOSA 59; RP59</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613862<a name=\"omim-OMIM.58613862\"> </a></td><td>RETINITIS PIGMENTOSA 38; RP38</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614034<a name=\"omim-OMIM.58614034\"> </a></td><td>HEME OXYGENASE 1 DEFICIENCY; HMOX1D</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614065<a name=\"omim-OMIM.58614065\"> </a></td><td>MYOPATHY, DISTAL, 4; MPD4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614173<a name=\"omim-OMIM.58614173\"> </a></td><td>JOUBERT SYNDROME 13; JBTS13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614180<a name=\"omim-OMIM.58614180\"> </a></td><td>RETINITIS PIGMENTOSA 61; RP61</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614181<a name=\"omim-OMIM.58614181\"> </a></td><td>RETINITIS PIGMENTOSA 62; RP62</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614199<a name=\"omim-OMIM.58614199\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 5, WITH OR WITHOUT OCULAR ABNORMALITIES; NPHS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614202<a name=\"omim-OMIM.58614202\"> </a></td><td>RAFIQ SYNDROME; RAFQS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614225<a name=\"omim-OMIM.58614225\"> </a></td><td>WARBURG MICRO SYNDROME 2; WARBM2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614254<a name=\"omim-OMIM.58614254\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH OR WITHOUT HYPERKINETIC MOVEMENTS AND SEIZURES, AUTOSOMAL DOMINANT; NDHMSD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614255<a name=\"omim-OMIM.58614255\"> </a></td><td>NESCAV SYNDROME; NESCAVS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614299<a name=\"omim-OMIM.58614299\"> </a></td><td>MULTIPLE MITOCHONDRIAL DYSFUNCTIONS SYNDROME 2 WITH HYPERGLYCINEMIA; MMDS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614381<a name=\"omim-OMIM.58614381\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 8, WITH OR WITHOUT OLIGODONTIA AND/OR HYPOGONADOTROPIC HYPOGONADISM; HLD8</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614424<a name=\"omim-OMIM.58614424\"> </a></td><td>JOUBERT SYNDROME 14; JBTS14</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614500<a name=\"omim-OMIM.58614500\"> </a></td><td>CONE-ROD DYSTROPHY 16; CORD16</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614557<a name=\"omim-OMIM.58614557\"> </a></td><td>EHLERS-DANLOS SYNDROME, KYPHOSCOLIOTIC TYPE, 2; EDSKSCL2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614607<a name=\"omim-OMIM.58614607\"> </a></td><td>COFFIN-SIRIS SYNDROME 2; CSS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614615<a name=\"omim-OMIM.58614615\"> </a></td><td>JOUBERT SYNDROME 17; JBTS17</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614669<a name=\"omim-OMIM.58614669\"> </a></td><td>AURICULOCONDYLAR SYNDROME 2; ARCND2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614678<a name=\"omim-OMIM.58614678\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 1B; PCH1B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614744<a name=\"omim-OMIM.58614744\"> </a></td><td>FACIAL PARESIS, HEREDITARY CONGENITAL, 3; HCFP3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614753<a name=\"omim-OMIM.58614753\"> </a></td><td>SOTOS SYNDROME 2; SOTOS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614831<a name=\"omim-OMIM.58614831\"> </a></td><td>SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 13; SCAR13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614833<a name=\"omim-OMIM.58614833\"> </a></td><td>MICROCEPHALY, SHORT STATURE, AND POLYMICROGYRIA WITH OR WITHOUT SEIZURES; MSSP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614876<a name=\"omim-OMIM.58614876\"> </a></td><td>PEROXISOME BIOGENESIS DISORDER 8A (ZELLWEGER); PBD8A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614877<a name=\"omim-OMIM.58614877\"> </a></td><td>PEROXISOME BIOGENESIS DISORDER 8B; PBD8B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614932<a name=\"omim-OMIM.58614932\"> </a></td><td>COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 13; COXPD13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614945<a name=\"omim-OMIM.58614945\"> </a></td><td>DEAFNESS, AUTOSOMAL RECESSIVE 18B; DFNB18B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615030<a name=\"omim-OMIM.58615030\"> </a></td><td>SPASTIC PARAPLEGIA 56, AUTOSOMAL RECESSIVE; SPG56</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615031<a name=\"omim-OMIM.58615031\"> </a></td><td>SPASTIC PARAPLEGIA 49, AUTOSOMAL RECESSIVE; SPG49</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615065<a name=\"omim-OMIM.58615065\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, TYPE 5D; DA5D</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615071<a name=\"omim-OMIM.58615071\"> </a></td><td>ALAZAMI SYNDROME; ALAZS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615095<a name=\"omim-OMIM.58615095\"> </a></td><td>MICROCEPHALY 10, PRIMARY, AUTOSOMAL RECESSIVE; MCPH10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615181<a name=\"omim-OMIM.58615181\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH BRAIN AND EYE ANOMALIES), TYPE A, 11; MDDGA11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615190<a name=\"omim-OMIM.58615190\"> </a></td><td>DYSKERATOSIS CONGENITA, AUTOSOMAL RECESSIVE 5; DKCB5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615191<a name=\"omim-OMIM.58615191\"> </a></td><td>LISSENCEPHALY 5; LIS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615268<a name=\"omim-OMIM.58615268\"> </a></td><td>CEREBELLAR ATAXIA, MENTAL RETARDATION, AND DYSEQUILIBRIUM SYNDROME 4; CAMRQ4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615286<a name=\"omim-OMIM.58615286\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL RECESSIVE 36; MRT36</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615352<a name=\"omim-OMIM.58615352\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 14; MDDGC14</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615411<a name=\"omim-OMIM.58615411\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 3; CDCBM3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615412<a name=\"omim-OMIM.58615412\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 4; CDCBM4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615419<a name=\"omim-OMIM.58615419\"> </a></td><td>HYPOTONIA, INFANTILE, WITH PSYCHOMOTOR RETARDATION AND CHARACTERISTIC FACIES 1; IHPRF1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615471<a name=\"omim-OMIM.58615471\"> </a></td><td>MITOCHONDRIAL DNA DEPLETION SYNDROME 13 (ENCEPHALOMYOPATHIC TYPE); MTDPS13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615476<a name=\"omim-OMIM.58615476\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 18; DEE18</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615485<a name=\"omim-OMIM.58615485\"> </a></td><td>BAINBRIDGE-ROPERS SYNDROME; BRPS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615502<a name=\"omim-OMIM.58615502\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 21; MRD21</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615546<a name=\"omim-OMIM.58615546\"> </a></td><td>VAN MALDERGEM SYNDROME 2; VMLDS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615574<a name=\"omim-OMIM.58615574\"> </a></td><td>ASPARAGINE SYNTHETASE DEFICIENCY; ASNSD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615681<a name=\"omim-OMIM.58615681\"> </a></td><td>SPASTIC PARAPLEGIA 62, AUTOSOMAL RECESSIVE; SPG62</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615715<a name=\"omim-OMIM.58615715\"> </a></td><td>BONE MARROW FAILURE SYNDROME 2; BMFS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615716<a name=\"omim-OMIM.58615716\"> </a></td><td>HYPERPHOSPHATASIA WITH MENTAL RETARDATION SYNDROME 4; HPMRS4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615760<a name=\"omim-OMIM.58615760\"> </a></td><td>MICROCEPHALY, PROGRESSIVE, WITH SEIZURES AND CEREBRAL AND CEREBELLAR ATROPHY; MSCCA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615763<a name=\"omim-OMIM.58615763\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 5; CDCBM5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615809<a name=\"omim-OMIM.58615809\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 9; PCH9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615829<a name=\"omim-OMIM.58615829\"> </a></td><td>XIA-GIBBS SYNDROME; XIGIS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615834<a name=\"omim-OMIM.58615834\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 26; MRD26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615846<a name=\"omim-OMIM.58615846\"> </a></td><td>AICARDI-GOUTIERES SYNDROME 7; AGS7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615866<a name=\"omim-OMIM.58615866\"> </a></td><td>COFFIN-SIRIS SYNDROME 9; CSS9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615909<a name=\"omim-OMIM.58615909\"> </a></td><td>DIAMOND-BLACKFAN ANEMIA 13; DBA13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615948<a name=\"omim-OMIM.58615948\"> </a></td><td>OROFACIODIGITAL SYNDROME XIV; OFD14</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615959<a name=\"omim-OMIM.58615959\"> </a></td><td>MYOPATHY, CENTRONUCLEAR, 5; CNM5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615960<a name=\"omim-OMIM.58615960\"> </a></td><td>PORETTI-BOLTSHAUSER SYNDROME; PTBHS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615973<a name=\"omim-OMIM.58615973\"> </a></td><td>CONE-ROD DYSTROPHY 20; CORD20</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615981<a name=\"omim-OMIM.58615981\"> </a></td><td>BARDET-BIEDL SYNDROME 2; BBS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615982<a name=\"omim-OMIM.58615982\"> </a></td><td>BARDET-BIEDL SYNDROME 4; BBS4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615983<a name=\"omim-OMIM.58615983\"> </a></td><td>BARDET-BIEDL SYNDROME 5; BBS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615993<a name=\"omim-OMIM.58615993\"> </a></td><td>BARDET-BIEDL SYNDROME 16; BBS16</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616051<a name=\"omim-OMIM.58616051\"> </a></td><td>MICROCEPHALY 13, PRIMARY, AUTOSOMAL RECESSIVE; MCPH13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616056<a name=\"omim-OMIM.58616056\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 26; DEE26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616081<a name=\"omim-OMIM.58616081\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 1C; PCH1C</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616094<a name=\"omim-OMIM.58616094\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 12; MDDGC12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616127<a name=\"omim-OMIM.58616127\"> </a></td><td>SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 17; SCAR17</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616140<a name=\"omim-OMIM.58616140\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 9; HLD9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616155<a name=\"omim-OMIM.58616155\"> </a></td><td>CHARCOT-MARIE-TOOTH DISEASE, AXONAL, TYPE 2S; CMT2S</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616171<a name=\"omim-OMIM.58616171\"> </a></td><td>MICROCEPHALY AND CHORIORETINOPATHY, AUTOSOMAL RECESSIVE, 2; MCCRP2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616199<a name=\"omim-OMIM.58616199\"> </a></td><td>POLYGLUCOSAN BODY MYOPATHY 2; PGBM2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616211<a name=\"omim-OMIM.58616211\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 28; DEE28</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616263<a name=\"omim-OMIM.58616263\"> </a></td><td>NEUROLOGIC, ENDOCRINE, AND PANCREATIC DISEASE, MULTISYSTEM, INFANTILE-ONSET; IMNEPD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616266<a name=\"omim-OMIM.58616266\"> </a></td><td>CONGENITAL CONTRACTURES OF THE LIMBS AND FACE, HYPOTONIA, AND DEVELOPMENTAL DELAY; CLIFAHDD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616271<a name=\"omim-OMIM.58616271\"> </a></td><td>3-METHYLGLUTACONIC ACIDURIA, TYPE VII; MGCA7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616277<a name=\"omim-OMIM.58616277\"> </a></td><td>MITOCHONDRIAL SHORT-CHAIN ENOYL-CoA HYDRATASE 1 DEFICIENCY; ECHS1D</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616281<a name=\"omim-OMIM.58616281\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH SPASTIC PARAPLEGIA AND MICROCEPHALY; NEDSPM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616321<a name=\"omim-OMIM.58616321\"> </a></td><td>MYASTHENIC SYNDROME, CONGENITAL, 3A, SLOW-CHANNEL; CMS3A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616354<a name=\"omim-OMIM.58616354\"> </a></td><td>SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 20; SCAR20</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616394<a name=\"omim-OMIM.58616394\"> </a></td><td>RETINITIS PIGMENTOSA 71; RP71</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616420<a name=\"omim-OMIM.58616420\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 10; HLD10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616421<a name=\"omim-OMIM.58616421\"> </a></td><td>MYOCLONIC-ATONIC EPILEPSY; MAE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616471<a name=\"omim-OMIM.58616471\"> </a></td><td>BETHLEM MYOPATHY 2; BTHLM2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616490<a name=\"omim-OMIM.58616490\"> </a></td><td>JOUBERT SYNDROME 23; JBTS23</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616531<a name=\"omim-OMIM.58616531\"> </a></td><td>POLYMICROGYRIA, PERISYLVIAN, WITH CEREBELLAR HYPOPLASIA AND ARTHROGRYPOSIS; PMGYCHA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616544<a name=\"omim-OMIM.58616544\"> </a></td><td>RETINITIS PIGMENTOSA 73; RP73</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616562<a name=\"omim-OMIM.58616562\"> </a></td><td>RETINITIS PIGMENTOSA 74; RP74</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616564<a name=\"omim-OMIM.58616564\"> </a></td><td>NOONAN SYNDROME 10; NS10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616632<a name=\"omim-OMIM.58616632\"> </a></td><td>SEIZURES, CORTICAL BLINDNESS, AND MICROCEPHALY SYNDROME; SCBMS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616647<a name=\"omim-OMIM.58616647\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 35; DEE35</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616649<a name=\"omim-OMIM.58616649\"> </a></td><td>SPHEROCYTOSIS, TYPE 2; SPH2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616651<a name=\"omim-OMIM.58616651\"> </a></td><td>ROIFMAN SYNDROME; RFMN</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616654<a name=\"omim-OMIM.58616654\"> </a></td><td>JOUBERT SYNDROME 24; JBTS24</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616657<a name=\"omim-OMIM.58616657\"> </a></td><td>SPASTIC TETRAPLEGIA, THIN CORPUS CALLOSUM, AND PROGRESSIVE MICROCEPHALY; SPATCCM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616668<a name=\"omim-OMIM.58616668\"> </a></td><td>CHARCOT-MARIE-TOOTH DISEASE, AXONAL, TYPE 2X; CMT2X</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616683<a name=\"omim-OMIM.58616683\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 12; HLD12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616721<a name=\"omim-OMIM.58616721\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIn; CDG2N</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616732<a name=\"omim-OMIM.58616732\"> </a></td><td>OPTIC ATROPHY 10 WITH OR WITHOUT ATAXIA, MENTAL RETARDATION, AND SEIZURES; OPA10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616738<a name=\"omim-OMIM.58616738\"> </a></td><td>RADIOULNAR SYNOSTOSIS WITH AMEGAKARYOCYTIC THROMBOCYTOPENIA 2; RUSAT2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616740<a name=\"omim-OMIM.58616740\"> </a></td><td>IMMUNODEFICIENCY 46; IMD46</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616789<a name=\"omim-OMIM.58616789\"> </a></td><td>MENTAL RETARDATION AND DISTINCTIVE FACIAL FEATURES WITH OR WITHOUT CARDIAC DEFECTS; MRFACD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616801<a name=\"omim-OMIM.58616801\"> </a></td><td>HYPOTONIA, INFANTILE, WITH PSYCHOMOTOR RETARDATION AND CHARACTERISTIC FACIES 2; IHPRF2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616875<a name=\"omim-OMIM.58616875\"> </a></td><td>CEREBELLAR ATROPHY, VISUAL IMPAIRMENT, AND PSYCHOMOTOR RETARDATION; CAVIPMR</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616892<a name=\"omim-OMIM.58616892\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 12; NPHS12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616900<a name=\"omim-OMIM.58616900\"> </a></td><td>HYPOTONIA, INFANTILE, WITH PSYCHOMOTOR RETARDATION AND CHARACTERISTIC FACIES 3; IHPRF3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616973<a name=\"omim-OMIM.58616973\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 42; MRD42</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617011<a name=\"omim-OMIM.58617011\"> </a></td><td>MACROCEPHALY, DYSMORPHIC FACIES, AND PSYCHOMOTOR RETARDATION; MDFPMR</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617013<a name=\"omim-OMIM.58617013\"> </a></td><td>HYPERMANGANESEMIA WITH DYSTONIA 2; HMNDYT2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617047<a name=\"omim-OMIM.58617047\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 26; CMH26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617052<a name=\"omim-OMIM.58617052\"> </a></td><td>BONE MARROW FAILURE SYNDROME 3; BMFS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617053<a name=\"omim-OMIM.58617053\"> </a></td><td>MIRAGE SYNDROME; MIRAGE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617093<a name=\"omim-OMIM.58617093\"> </a></td><td>GROWTH RETARDATION, IMPAIRED INTELLECTUAL DEVELOPMENT, HYPOTONIA, AND HEPATOPATHY; GRIDHH</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617106<a name=\"omim-OMIM.58617106\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 42; DEE42</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617120<a name=\"omim-OMIM.58617120\"> </a></td><td>JOUBERT SYNDROME 27; JBTS27</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617121<a name=\"omim-OMIM.58617121\"> </a></td><td>JOUBERT SYNDROME 28; JBTS28</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617123<a name=\"omim-OMIM.58617123\"> </a></td><td>RETINITIS PIGMENTOSA 76; RP76</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617137<a name=\"omim-OMIM.58617137\"> </a></td><td>FRONTOMETAPHYSEAL DYSPLASIA 2; FMD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617146<a name=\"omim-OMIM.58617146\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, WITH IMPAIRED PROPRIOCEPTION AND TOUCH; DAIPT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617183<a name=\"omim-OMIM.58617183\"> </a></td><td>HAREL-YOON SYNDROME; HAYOS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617193<a name=\"omim-OMIM.58617193\"> </a></td><td>ENCEPHALOPATHY, PROGRESSIVE, EARLY-ONSET, WITH BRAIN ATROPHY AND THIN CORPUS CALLOSUM; PEBAT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617222<a name=\"omim-OMIM.58617222\"> </a></td><td>SUDDEN CARDIAC FAILURE, INFANTILE; SCFI</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617276<a name=\"omim-OMIM.58617276\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 48; DEE48</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617330<a name=\"omim-OMIM.58617330\"> </a></td><td>HYPOTONIA, ATAXIA, AND DELAYED DEVELOPMENT SYNDROME; HADDS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617350<a name=\"omim-OMIM.58617350\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 52; DEE52</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617397<a name=\"omim-OMIM.58617397\"> </a></td><td>PSEUDO-TORCH SYNDROME 2; PTORCH2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617433<a name=\"omim-OMIM.58617433\"> </a></td><td>RETINITIS PIGMENTOSA 78; RP78</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617443<a name=\"omim-OMIM.58617443\"> </a></td><td>BLEEDING DISORDER, PLATELET-TYPE, 21; BDPLT21</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617460<a name=\"omim-OMIM.58617460\"> </a></td><td>RETINITIS PIGMENTOSA 79; RP79</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617481<a name=\"omim-OMIM.58617481\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, HYPOTONIA, AND VARIABLE BRAIN ANOMALIES; NMIHBA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617537<a name=\"omim-OMIM.58617537\"> </a></td><td>RAHMAN SYNDROME; RMNS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617547<a name=\"omim-OMIM.58617547\"> </a></td><td>RETINAL DYSTROPHY WITH OR WITHOUT MACULAR STAPHYLOMA; RDMS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617622<a name=\"omim-OMIM.58617622\"> </a></td><td>JOUBERT SYNDROME 30; JBTS30</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617675<a name=\"omim-OMIM.58617675\"> </a></td><td>MYOPATHY, MITOCHONDRIAL, AND ATAXIA; MMYAT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617681<a name=\"omim-OMIM.58617681\"> </a></td><td>BLEPHAROCHEILODONTIC SYNDROME 2; BCDS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617694<a name=\"omim-OMIM.58617694\"> </a></td><td>AL KAISSI SYNDROME; ALKAS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617781<a name=\"omim-OMIM.58617781\"> </a></td><td>RETINITIS PIGMENTOSA 80; RP80</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617805<a name=\"omim-OMIM.58617805\"> </a></td><td>RENAL HYPODYSPLASIA/APLASIA 3; RHDA3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617807<a name=\"omim-OMIM.58617807\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH ATAXIC GAIT, ABSENT SPEECH, AND DECREASED CORTICAL WHITE MATTER; NDAGSCW</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617829<a name=\"omim-OMIM.58617829\"> </a></td><td>EPILEPTIC ENCEPHALOPATHY, INFANTILE OR EARLY CHILDHOOD, 2; IECEE2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617873<a name=\"omim-OMIM.58617873\"> </a></td><td>COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 35; COXPD35</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617948<a name=\"omim-OMIM.58617948\"> </a></td><td>ELLIPTOCYTOSIS 3; EL3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617954<a name=\"omim-OMIM.58617954\"> </a></td><td>MULTIPLE MITOCHONDRIAL DYSFUNCTIONS SYNDROME 6; MMDS6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618056<a name=\"omim-OMIM.58618056\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH CEREBELLAR ATROPHY AND WITH OR WITHOUT SEIZURES; NEDCAS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618088<a name=\"omim-OMIM.58618088\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH REGRESSION, ABNORMAL MOVEMENTS, LOSS OF SPEECH, AND SEIZURES; NEDAMSS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618129<a name=\"omim-OMIM.58618129\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL DOMINANT 4; LGMDD4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618138<a name=\"omim-OMIM.58618138\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 23; LGMDR23</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618174<a name=\"omim-OMIM.58618174\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 9; CDCBM9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618225<a name=\"omim-OMIM.58618225\"> </a></td><td>MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 4; MC1DN4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618273<a name=\"omim-OMIM.58618273\"> </a></td><td>MEGA-CORPUS-CALLOSUM SYNDROME WITH CEREBELLAR HYPOPLASIA AND CORTICAL MALFORMATIONS; MCCCHCM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618316<a name=\"omim-OMIM.58618316\"> </a></td><td>INTELLECTUAL DEVELOPMENTAL DISORDER WITH CARDIAC DEFECTS AND DYSMORPHIC FACIES; IDDCDF</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618325<a name=\"omim-OMIM.58618325\"> </a></td><td>LISSENCEPHALY 9 WITH COMPLEX BRAINSTEM MALFORMATION; LIS9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618404<a name=\"omim-OMIM.58618404\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 18; HLD18</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618512<a name=\"omim-OMIM.58618512\"> </a></td><td>O\\'DONNELL-LURIA-RODAN SYNDROME; ODLURO</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614921<a name=\"omim-OMIM.58614921\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE It; CDG1T</td></tr></table></div>" + }, + "url" : "https://omim.org/", + "version" : "0.2.0", + "name" : "OMIM", + "title" : "Online Mendelian Inheritance in Man", + "status" : "draft", + "experimental" : false, + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "An online database that describes the function and phenotypes associated with human genes", + "caseSensitive" : true, + "content" : "fragment", + "count" : 497, + "concept" : [{ + "code" : "OMIM:613801", + "display" : "Retinitis pigmentosa-40" + }, + { + "code" : "OMIM:213300", + "display" : "Joubert syndrome 1" + }, + { + "code" : "OMIM:615780", + "display" : "Retinitis pigmentosa 69" + }, + { + "code" : "OMIM:613826", + "display" : "Leber congenital amaurosis 6" + }, + { + "code" : "OMIM:310200", + "display" : "Duchenne muscular dystrophy" + }, + { + "code" : "OMIM:617194", + "display" : "Lethal congenital contracture syndrome 11" + }, + { + "code" : "OMIM:105400", + "display" : "AMYOTROPHIC LATERAL SCLEROSIS 1; ALS1" + }, + { + "code" : "OMIM:108120", + "display" : "ARTHROGRYPOSIS, DISTAL, TYPE 1A; DA1A" + }, + { + "code" : "OMIM:114300", + "display" : "ARTHROGRYPOSIS, DISTAL, TYPE 3; DA3" + }, + { + "code" : "OMIM:115195", + "display" : "CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 2; CMH2" + }, + { + "code" : "OMIM:115196", + "display" : "CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 3; CMH3" + }, + { + "code" : "OMIM:115197", + "display" : "CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 4; CMH4" + }, + { + "code" : "OMIM:115200", + "display" : "CARDIOMYOPATHY, DILATED, 1A; CMD1A" + }, + { + "code" : "OMIM:117000", + "display" : "CENTRAL CORE DISEASE OF MUSCLE; CCD" + }, + { + "code" : "OMIM:117360", + "display" : "SPINOCEREBELLAR ATAXIA 29; SCA29" + }, + { + "code" : "OMIM:119530", + "display" : "OROFACIAL CLEFT 1; OFC1" + }, + { + "code" : "OMIM:122470", + "display" : "CORNELIA DE LANGE SYNDROME 1; CDLS1" + }, + { + "code" : "OMIM:130600", + "display" : "ELLIPTOCYTOSIS 2; EL2" + }, + { + "code" : "OMIM:135900", + "display" : "COFFIN-SIRIS SYNDROME 1; CSS1" + }, + { + "code" : "OMIM:136140", + "display" : "FLOATING-HARBOR SYNDROME; FLHS" + }, + { + "code" : "OMIM:137920", + "display" : "RENAL CYSTS AND DIABETES SYNDROME; RCAD" + }, + { + "code" : "OMIM:139090", + "display" : "GRAY PLATELET SYNDROME; GPS" + }, + { + "code" : "OMIM:139210", + "display" : "MYHRE SYNDROME; MYHRS" + }, + { + "code" : "OMIM:143095", + "display" : "SPONDYLOEPIPHYSEAL DYSPLASIA WITH CONGENITAL JOINT DISLOCATIONS; SEDCJD" + }, + { + "code" : "OMIM:143465", + "display" : "ATTENTION DEFICIT-HYPERACTIVITY DISORDER; ADHD" + }, + { + "code" : "OMIM:147891", + "display" : "ISCHIOCOXOPODOPATELLAR SYNDROME WITH OR WITHOUT PULMONARY ARTERIAL HYPERTENSION; ICPPS" + }, + { + "code" : "OMIM:147920", + "display" : "KABUKI SYNDROME 1; KABUK1" + }, + { + "code" : "OMIM:148050", + "display" : "KBG SYNDROME; KBGS" + }, + { + "code" : "OMIM:149400", + "display" : "HYPEREKPLEXIA 1; HKPX1" + }, + { + "code" : "OMIM:152950", + "display" : "MICROCEPHALY WITH OR WITHOUT CHORIORETINOPATHY, LYMPHEDEMA, OR MENTAL RETARDATION; MCLMR" + }, + { + "code" : "OMIM:153670", + "display" : "BERNARD-SOULIER SYNDROME, TYPE A2, AUTOSOMAL DOMINANT; BSSA2" + }, + { + "code" : "OMIM:154400", + "display" : "ACROFACIAL DYSOSTOSIS 1, NAGER TYPE; AFD1" + }, + { + "code" : "OMIM:154700", + "display" : "MARFAN SYNDROME; MFS" + }, + { + "code" : "OMIM:155310", + "display" : "VISCERAL MYOPATHY; VSCM" + }, + { + "code" : "OMIM:158590", + "display" : "NEURONOPATHY, DISTAL HEREDITARY MOTOR, TYPE IIA; HMN2A" + }, + { + "code" : "OMIM:158810", + "display" : "BETHLEM MYOPATHY 1; BTHLM1" + }, + { + "code" : "OMIM:159550", + "display" : "ATAXIA-PANCYTOPENIA SYNDROME; ATXPC" + }, + { + "code" : "OMIM:160150", + "display" : "MYOPATHY, CENTRONUCLEAR, 1; CNM1" + }, + { + "code" : "OMIM:160500", + "display" : "MYOPATHY, DISTAL, 1; MPD1" + }, + { + "code" : "OMIM:160800", + "display" : "MYOTONIA CONGENITA, AUTOSOMAL DOMINANT" + }, + { + "code" : "OMIM:160900", + "display" : "MYOTONIC DYSTROPHY 1; DM1" + }, + { + "code" : "OMIM:161800", + "display" : "NEMALINE MYOPATHY 3; NEM3" + }, + { + "code" : "OMIM:163950", + "display" : "NOONAN SYNDROME 1; NS1" + }, + { + "code" : "OMIM:178110", + "display" : "CONTRACTURES, PTERYGIA, AND SPONDYLOCARPOTARSAL FUSION SYNDROME 1A; CPSFS1A" + }, + { + "code" : "OMIM:178500", + "display" : "PULMONARY FIBROSIS, IDIOPATHIC; IPF" + }, + { + "code" : "OMIM:180100", + "display" : "RETINITIS PIGMENTOSA 1; RP1" + }, + { + "code" : "OMIM:180849", + "display" : "RUBINSTEIN-TAYBI SYNDROME 1; RSTS1" + }, + { + "code" : "OMIM:181430", + "display" : "SCAPULOPERONEAL MYOPATHY, MYH7-RELATED; SPMM" + }, + { + "code" : "OMIM:182601", + "display" : "SPASTIC PARAPLEGIA 4, AUTOSOMAL DOMINANT; SPG4" + }, + { + "code" : "OMIM:188000", + "display" : "THROMBOCYTOPENIA 2; THC2" + }, + { + "code" : "OMIM:191480", + "display" : "UNCOMBABLE HAIR SYNDROME 1; UHS1" + }, + { + "code" : "OMIM:203800", + "display" : "ALSTROM SYNDROME; ALMS" + }, + { + "code" : "OMIM:204200", + "display" : "CEROID LIPOFUSCINOSIS, NEURONAL, 3; CLN3" + }, + { + "code" : "OMIM:204500", + "display" : "CEROID LIPOFUSCINOSIS, NEURONAL, 2; CLN2" + }, + { + "code" : "OMIM:205100", + "display" : "AMYOTROPHIC LATERAL SCLEROSIS 2, JUVENILE; ALS2" + }, + { + "code" : "OMIM:206900", + "display" : "MICROPHTHALMIA, SYNDROMIC 3; MCOPS3" + }, + { + "code" : "OMIM:208900", + "display" : "ATAXIA-TELANGIECTASIA; AT" + }, + { + "code" : "OMIM:209850", + "display" : "AUTISM" + }, + { + "code" : "OMIM:209900", + "display" : "BARDET-BIEDL SYNDROME 1; BBS1" + }, + { + "code" : "OMIM:210000", + "display" : "BEHR SYNDROME; BEHRS" + }, + { + "code" : "OMIM:210720", + "display" : "MICROCEPHALIC OSTEODYSPLASTIC PRIMORDIAL DWARFISM, TYPE II; MOPD2" + }, + { + "code" : "OMIM:210900", + "display" : "BLOOM SYNDROME; BLM" + }, + { + "code" : "OMIM:212065", + "display" : "CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ia; CDG1A" + }, + { + "code" : "OMIM:212066", + "display" : "CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIa; CDG2A" + }, + { + "code" : "OMIM:214500", + "display" : "CHEDIAK-HIGASHI SYNDROME; CHS" + }, + { + "code" : "OMIM:214800", + "display" : "CHARGE SYNDROME" + }, + { + "code" : "OMIM:215500", + "display" : "CHOROIDAL DYSTROPHY, CENTRAL AREOLAR, 1; CACD1" + }, + { + "code" : "OMIM:216400", + "display" : "COCKAYNE SYNDROME A; CSA" + }, + { + "code" : "OMIM:216550", + "display" : "COHEN SYNDROME; COH1" + }, + { + "code" : "OMIM:217080", + "display" : "JALILI SYNDROME" + }, + { + "code" : "OMIM:217980", + "display" : "CORPUS CALLOSUM, AGENESIS OF, WITH FACIAL ANOMALIES AND ROBIN SEQUENCE" + }, + { + "code" : "OMIM:218340", + "display" : "TEMTAMY SYNDROME; TEMTYS" + }, + { + "code" : "OMIM:219200", + "display" : "CUTIS LAXA, AUTOSOMAL RECESSIVE, TYPE IIA; ARCL2A" + }, + { + "code" : "OMIM:224050", + "display" : "CEREBELLAR ATAXIA, MENTAL RETARDATION, AND DYSEQUILIBRIUM SYNDROME 1; CAMRQ1" + }, + { + "code" : "OMIM:224690", + "display" : "MEIER-GORLIN SYNDROME 1; MGORS1" + }, + { + "code" : "OMIM:225753", + "display" : "PONTOCEREBELLAR HYPOPLASIA, TYPE 4; PCH4" + }, + { + "code" : "OMIM:225790", + "display" : "PROLIFERATIVE VASCULOPATHY AND HYDRANENCEPHALY-HYDROCEPHALY SYNDROME; PVHH" + }, + { + "code" : "OMIM:227650", + "display" : "FANCONI ANEMIA, COMPLEMENTATION GROUP A; FANCA" + }, + { + "code" : "OMIM:229600", + "display" : "FRUCTOSE INTOLERANCE, HEREDITARY; HFI" + }, + { + "code" : "OMIM:230000", + "display" : "FUCOSIDOSIS" + }, + { + "code" : "OMIM:230500", + "display" : "GM1-GANGLIOSIDOSIS, TYPE I" + }, + { + "code" : "OMIM:232300", + "display" : "GLYCOGEN STORAGE DISEASE II; GSD2" + }, + { + "code" : "OMIM:232600", + "display" : "GLYCOGEN STORAGE DISEASE V; GSD5" + }, + { + "code" : "OMIM:234200", + "display" : "NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 1; NBIA1" + }, + { + "code" : "OMIM:234500", + "display" : "HARTNUP DISORDER; HND" + }, + { + "code" : "OMIM:236000", + "display" : "LYMPHOMA, HODGKIN, CLASSIC; CHL" + }, + { + "code" : "OMIM:236600", + "display" : "HYDROCEPHALUS, CONGENITAL, 1; HYC1" + }, + { + "code" : "OMIM:236792", + "display" : "L-2-HYDROXYGLUTARIC ACIDURIA; L2HGA" + }, + { + "code" : "OMIM:243310", + "display" : "BARAITSER-WINTER SYNDROME 1; BRWS1" + }, + { + "code" : "OMIM:244450", + "display" : "KAUFMAN OCULOCEREBROFACIAL SYNDROME; 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CLIFAHDD" + }, + { + "code" : "OMIM:616271", + "display" : "3-METHYLGLUTACONIC ACIDURIA, TYPE VII; MGCA7" + }, + { + "code" : "OMIM:616277", + "display" : "MITOCHONDRIAL SHORT-CHAIN ENOYL-CoA HYDRATASE 1 DEFICIENCY; ECHS1D" + }, + { + "code" : "OMIM:616281", + "display" : "NEURODEVELOPMENTAL DISORDER WITH SPASTIC PARAPLEGIA AND MICROCEPHALY; NEDSPM" + }, + { + "code" : "OMIM:616321", + "display" : "MYASTHENIC SYNDROME, CONGENITAL, 3A, SLOW-CHANNEL; CMS3A" + }, + { + "code" : "OMIM:616354", + "display" : "SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 20; SCAR20" + }, + { + "code" : "OMIM:616394", + "display" : "RETINITIS PIGMENTOSA 71; RP71" + }, + { + "code" : "OMIM:616420", + "display" : "LEUKODYSTROPHY, HYPOMYELINATING, 10; HLD10" + }, + { + "code" : "OMIM:616421", + "display" : "MYOCLONIC-ATONIC EPILEPSY; MAE" + }, + { + "code" : "OMIM:616471", + "display" : "BETHLEM MYOPATHY 2; BTHLM2" + }, + { + "code" : "OMIM:616490", + "display" : "JOUBERT SYNDROME 23; JBTS23" + }, + { + "code" : "OMIM:616531", + "display" : "POLYMICROGYRIA, PERISYLVIAN, WITH CEREBELLAR HYPOPLASIA AND ARTHROGRYPOSIS; PMGYCHA" + }, + { + "code" : "OMIM:616544", + "display" : "RETINITIS PIGMENTOSA 73; RP73" + }, + { + "code" : "OMIM:616562", + "display" : "RETINITIS PIGMENTOSA 74; RP74" + }, + { + "code" : "OMIM:616564", + "display" : "NOONAN SYNDROME 10; NS10" + }, + { + "code" : "OMIM:616632", + "display" : "SEIZURES, CORTICAL BLINDNESS, AND MICROCEPHALY SYNDROME; SCBMS" + }, + { + "code" : "OMIM:616647", + "display" : "DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 35; DEE35" + }, + { + "code" : "OMIM:616649", + "display" : "SPHEROCYTOSIS, TYPE 2; SPH2" + }, + { + "code" : "OMIM:616651", + "display" : "ROIFMAN SYNDROME; RFMN" + }, + { + "code" : "OMIM:616654", + "display" : "JOUBERT SYNDROME 24; JBTS24" + }, + { + "code" : "OMIM:616657", + "display" : "SPASTIC TETRAPLEGIA, THIN CORPUS CALLOSUM, AND PROGRESSIVE MICROCEPHALY; SPATCCM" + }, + { + "code" : "OMIM:616668", + "display" : "CHARCOT-MARIE-TOOTH DISEASE, AXONAL, TYPE 2X; CMT2X" + }, + { + "code" : "OMIM:616683", + "display" : "LEUKODYSTROPHY, HYPOMYELINATING, 12; HLD12" + }, + { + "code" : "OMIM:616721", + "display" : "CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIn; CDG2N" + }, + { + "code" : "OMIM:616732", + "display" : "OPTIC ATROPHY 10 WITH OR WITHOUT ATAXIA, MENTAL RETARDATION, AND SEIZURES; OPA10" + }, + { + "code" : "OMIM:616738", + "display" : "RADIOULNAR SYNOSTOSIS WITH AMEGAKARYOCYTIC THROMBOCYTOPENIA 2; RUSAT2" + }, + { + "code" : "OMIM:616740", + "display" : "IMMUNODEFICIENCY 46; IMD46" + }, + { + "code" : "OMIM:616789", + "display" : "MENTAL RETARDATION AND DISTINCTIVE FACIAL FEATURES WITH OR WITHOUT CARDIAC DEFECTS; MRFACD" + }, + { + "code" : "OMIM:616801", + "display" : "HYPOTONIA, INFANTILE, WITH PSYCHOMOTOR RETARDATION AND CHARACTERISTIC FACIES 2; IHPRF2" + }, + { + "code" : "OMIM:616875", + "display" : "CEREBELLAR ATROPHY, VISUAL IMPAIRMENT, AND PSYCHOMOTOR RETARDATION; CAVIPMR" + }, + { + "code" : "OMIM:616892", + "display" : "NEPHROTIC SYNDROME, TYPE 12; NPHS12" + }, + { + "code" : "OMIM:616900", + "display" : "HYPOTONIA, INFANTILE, WITH PSYCHOMOTOR RETARDATION AND CHARACTERISTIC FACIES 3; IHPRF3" + }, + { + "code" : "OMIM:616973", + "display" : "MENTAL RETARDATION, AUTOSOMAL DOMINANT 42; MRD42" + }, + { + "code" : "OMIM:617011", + "display" : "MACROCEPHALY, DYSMORPHIC FACIES, AND PSYCHOMOTOR RETARDATION; MDFPMR" + }, + { + "code" : "OMIM:617013", + "display" : "HYPERMANGANESEMIA WITH DYSTONIA 2; HMNDYT2" + }, + { + "code" : "OMIM:617047", + "display" : "CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 26; CMH26" + }, + { + "code" : "OMIM:617052", + "display" : "BONE MARROW FAILURE SYNDROME 3; BMFS3" + }, + { + "code" : "OMIM:617053", + "display" : "MIRAGE SYNDROME; MIRAGE" + }, + { + "code" : "OMIM:617093", + "display" : "GROWTH RETARDATION, IMPAIRED INTELLECTUAL DEVELOPMENT, HYPOTONIA, AND HEPATOPATHY; GRIDHH" + }, + { + "code" : "OMIM:617106", + "display" : "DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 42; DEE42" + }, + { + "code" : "OMIM:617120", + "display" : "JOUBERT SYNDROME 27; JBTS27" + }, + { + "code" : "OMIM:617121", + "display" : "JOUBERT SYNDROME 28; JBTS28" + }, + { + "code" : "OMIM:617123", + "display" : "RETINITIS PIGMENTOSA 76; RP76" + }, + { + "code" : "OMIM:617137", + "display" : "FRONTOMETAPHYSEAL DYSPLASIA 2; FMD2" + }, + { + "code" : "OMIM:617146", + "display" : "ARTHROGRYPOSIS, DISTAL, WITH IMPAIRED PROPRIOCEPTION AND TOUCH; DAIPT" + }, + { + "code" : "OMIM:617183", + "display" : "HAREL-YOON SYNDROME; HAYOS" + }, + { + "code" : "OMIM:617193", + "display" : "ENCEPHALOPATHY, PROGRESSIVE, EARLY-ONSET, WITH BRAIN ATROPHY AND THIN CORPUS CALLOSUM; PEBAT" + }, + { + "code" : "OMIM:617222", + "display" : "SUDDEN CARDIAC FAILURE, INFANTILE; SCFI" + }, + { + "code" : "OMIM:617276", + "display" : "DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 48; DEE48" + }, + { + "code" : "OMIM:617330", + "display" : "HYPOTONIA, ATAXIA, AND DELAYED DEVELOPMENT SYNDROME; HADDS" + }, + { + "code" : "OMIM:617350", + "display" : "DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 52; DEE52" + }, + { + "code" : "OMIM:617397", + "display" : "PSEUDO-TORCH SYNDROME 2; PTORCH2" + }, + { + "code" : "OMIM:617433", + "display" : "RETINITIS PIGMENTOSA 78; RP78" + }, + { + "code" : "OMIM:617443", + "display" : "BLEEDING DISORDER, PLATELET-TYPE, 21; BDPLT21" + }, + { + "code" : "OMIM:617460", + "display" : "RETINITIS PIGMENTOSA 79; RP79" + }, + { + "code" : "OMIM:617481", + "display" : "NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, HYPOTONIA, AND VARIABLE BRAIN ANOMALIES; NMIHBA" + }, + { + "code" : "OMIM:617537", + "display" : "RAHMAN SYNDROME; RMNS" + }, + { + "code" : "OMIM:617547", + "display" : "RETINAL DYSTROPHY WITH OR WITHOUT MACULAR STAPHYLOMA; RDMS" + }, + { + "code" : "OMIM:617622", + "display" : "JOUBERT SYNDROME 30; JBTS30" + }, + { + "code" : "OMIM:617675", + "display" : "MYOPATHY, MITOCHONDRIAL, AND ATAXIA; MMYAT" + }, + { + "code" : "OMIM:617681", + "display" : "BLEPHAROCHEILODONTIC SYNDROME 2; BCDS2" + }, + { + "code" : "OMIM:617694", + "display" : "AL KAISSI SYNDROME; ALKAS" + }, + { + "code" : "OMIM:617781", + "display" : "RETINITIS PIGMENTOSA 80; RP80" + }, + { + "code" : "OMIM:617805", + "display" : "RENAL HYPODYSPLASIA/APLASIA 3; RHDA3" + }, + { + "code" : "OMIM:617807", + "display" : "NEURODEVELOPMENTAL DISORDER WITH ATAXIC GAIT, ABSENT SPEECH, AND DECREASED CORTICAL WHITE MATTER; NDAGSCW" + }, + { + "code" : "OMIM:617829", + "display" : "EPILEPTIC ENCEPHALOPATHY, INFANTILE OR EARLY CHILDHOOD, 2; IECEE2" + }, + { + "code" : "OMIM:617873", + "display" : "COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 35; COXPD35" + }, + { + "code" : "OMIM:617948", + "display" : "ELLIPTOCYTOSIS 3; EL3" + }, + { + "code" : "OMIM:617954", + "display" : "MULTIPLE MITOCHONDRIAL DYSFUNCTIONS SYNDROME 6; MMDS6" + }, + { + "code" : "OMIM:618056", + "display" : "NEURODEVELOPMENTAL DISORDER WITH CEREBELLAR ATROPHY AND WITH OR WITHOUT SEIZURES; NEDCAS" + }, + { + "code" : "OMIM:618088", + "display" : "NEURODEVELOPMENTAL DISORDER WITH REGRESSION, ABNORMAL MOVEMENTS, LOSS OF SPEECH, AND SEIZURES; NEDAMSS" + }, + { + "code" : "OMIM:618129", + "display" : "MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL DOMINANT 4; LGMDD4" + }, + { + "code" : "OMIM:618138", + "display" : "MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 23; LGMDR23" + }, + { + "code" : "OMIM:618174", + "display" : "CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 9; CDCBM9" + }, + { + "code" : "OMIM:618225", + "display" : "MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 4; MC1DN4" + }, + { + "code" : "OMIM:618273", + "display" : "MEGA-CORPUS-CALLOSUM SYNDROME WITH CEREBELLAR HYPOPLASIA AND CORTICAL MALFORMATIONS; MCCCHCM" + }, + { + "code" : "OMIM:618316", + "display" : "INTELLECTUAL DEVELOPMENTAL DISORDER WITH CARDIAC DEFECTS AND DYSMORPHIC FACIES; IDDCDF" + }, + { + "code" : "OMIM:618325", + "display" : "LISSENCEPHALY 9 WITH COMPLEX BRAINSTEM MALFORMATION; LIS9" + }, + { + "code" : "OMIM:618404", + "display" : "LEUKODYSTROPHY, HYPOMYELINATING, 18; HLD18" + }, + { + "code" : "OMIM:618512", + "display" : "O\\'DONNELL-LURIA-RODAN SYNDROME; ODLURO" + }, + { + "code" : "OMIM:614921", + "display" : "CONGENITAL DISORDER OF GLYCOSYLATION, TYPE It; CDG1T" + }] } \ No newline at end of file diff --git a/CodeSystem-omim.json.html b/CodeSystem-omim.json.html index 1487f360..be042181 100644 --- a/CodeSystem-omim.json.html +++ b/CodeSystem-omim.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Online Mendelian Inheritance in Man - JSON Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: Online Mendelian Inheritance in Man - JSON Representation</h2> "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a>" : "Online Mendelian Inheritance in Man", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a>" : "draft", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">experimental</a>" : false, - "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>" : [ { @@ -2349,7 +2349,7 @@ <h2 id="root">: Online Mendelian Inheritance in Man - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-omim.ttl b/CodeSystem-omim.ttl index 17cc04d5..8e2a5583 100644 --- a/CodeSystem-omim.ttl +++ b/CodeSystem-omim.ttl @@ -7,19 +7,19 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/omim> a fhir:CodeSystem; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "omim"]; + fhir:Resource.id [ fhir:value "omim"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://omim.org/</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">OMIM:613801<a name=\"omim-OMIM.58613801\"> </a></td><td>Retinitis pigmentosa-40</td></tr><tr><td style=\"white-space:nowrap\">OMIM:213300<a name=\"omim-OMIM.58213300\"> </a></td><td>Joubert syndrome 1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615780<a name=\"omim-OMIM.58615780\"> </a></td><td>Retinitis pigmentosa 69</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613826<a name=\"omim-OMIM.58613826\"> </a></td><td>Leber congenital amaurosis 6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:310200<a name=\"omim-OMIM.58310200\"> </a></td><td>Duchenne muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617194<a name=\"omim-OMIM.58617194\"> </a></td><td>Lethal congenital contracture syndrome 11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:105400<a name=\"omim-OMIM.58105400\"> </a></td><td>AMYOTROPHIC LATERAL SCLEROSIS 1; ALS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:108120<a name=\"omim-OMIM.58108120\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, TYPE 1A; DA1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:114300<a name=\"omim-OMIM.58114300\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, TYPE 3; DA3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:115195<a name=\"omim-OMIM.58115195\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 2; CMH2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:115196<a name=\"omim-OMIM.58115196\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 3; CMH3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:115197<a name=\"omim-OMIM.58115197\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 4; CMH4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:115200<a name=\"omim-OMIM.58115200\"> </a></td><td>CARDIOMYOPATHY, DILATED, 1A; CMD1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:117000<a name=\"omim-OMIM.58117000\"> </a></td><td>CENTRAL CORE DISEASE OF MUSCLE; CCD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:117360<a name=\"omim-OMIM.58117360\"> </a></td><td>SPINOCEREBELLAR ATAXIA 29; SCA29</td></tr><tr><td style=\"white-space:nowrap\">OMIM:119530<a name=\"omim-OMIM.58119530\"> </a></td><td>OROFACIAL CLEFT 1; OFC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:122470<a name=\"omim-OMIM.58122470\"> </a></td><td>CORNELIA DE LANGE SYNDROME 1; CDLS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:130600<a name=\"omim-OMIM.58130600\"> </a></td><td>ELLIPTOCYTOSIS 2; EL2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:135900<a name=\"omim-OMIM.58135900\"> </a></td><td>COFFIN-SIRIS SYNDROME 1; CSS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:136140<a name=\"omim-OMIM.58136140\"> </a></td><td>FLOATING-HARBOR SYNDROME; FLHS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:137920<a name=\"omim-OMIM.58137920\"> </a></td><td>RENAL CYSTS AND DIABETES SYNDROME; RCAD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:139090<a name=\"omim-OMIM.58139090\"> </a></td><td>GRAY PLATELET SYNDROME; GPS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:139210<a name=\"omim-OMIM.58139210\"> </a></td><td>MYHRE SYNDROME; MYHRS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:143095<a name=\"omim-OMIM.58143095\"> </a></td><td>SPONDYLOEPIPHYSEAL DYSPLASIA WITH CONGENITAL JOINT DISLOCATIONS; SEDCJD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:143465<a name=\"omim-OMIM.58143465\"> </a></td><td>ATTENTION DEFICIT-HYPERACTIVITY DISORDER; ADHD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:147891<a name=\"omim-OMIM.58147891\"> </a></td><td>ISCHIOCOXOPODOPATELLAR SYNDROME WITH OR WITHOUT PULMONARY ARTERIAL HYPERTENSION; ICPPS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:147920<a name=\"omim-OMIM.58147920\"> </a></td><td>KABUKI SYNDROME 1; KABUK1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:148050<a name=\"omim-OMIM.58148050\"> </a></td><td>KBG SYNDROME; KBGS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:149400<a name=\"omim-OMIM.58149400\"> </a></td><td>HYPEREKPLEXIA 1; HKPX1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:152950<a name=\"omim-OMIM.58152950\"> </a></td><td>MICROCEPHALY WITH OR WITHOUT CHORIORETINOPATHY, LYMPHEDEMA, OR MENTAL RETARDATION; MCLMR</td></tr><tr><td style=\"white-space:nowrap\">OMIM:153670<a name=\"omim-OMIM.58153670\"> </a></td><td>BERNARD-SOULIER SYNDROME, TYPE A2, AUTOSOMAL DOMINANT; BSSA2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:154400<a name=\"omim-OMIM.58154400\"> </a></td><td>ACROFACIAL DYSOSTOSIS 1, NAGER TYPE; AFD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:154700<a name=\"omim-OMIM.58154700\"> </a></td><td>MARFAN SYNDROME; MFS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:155310<a name=\"omim-OMIM.58155310\"> </a></td><td>VISCERAL MYOPATHY; VSCM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:158590<a name=\"omim-OMIM.58158590\"> </a></td><td>NEURONOPATHY, DISTAL HEREDITARY MOTOR, TYPE IIA; HMN2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:158810<a name=\"omim-OMIM.58158810\"> </a></td><td>BETHLEM MYOPATHY 1; BTHLM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:159550<a name=\"omim-OMIM.58159550\"> </a></td><td>ATAXIA-PANCYTOPENIA SYNDROME; ATXPC</td></tr><tr><td style=\"white-space:nowrap\">OMIM:160150<a name=\"omim-OMIM.58160150\"> </a></td><td>MYOPATHY, CENTRONUCLEAR, 1; CNM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:160500<a name=\"omim-OMIM.58160500\"> </a></td><td>MYOPATHY, DISTAL, 1; MPD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:160800<a name=\"omim-OMIM.58160800\"> </a></td><td>MYOTONIA CONGENITA, AUTOSOMAL DOMINANT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:160900<a name=\"omim-OMIM.58160900\"> </a></td><td>MYOTONIC DYSTROPHY 1; DM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:161800<a name=\"omim-OMIM.58161800\"> </a></td><td>NEMALINE MYOPATHY 3; NEM3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:163950<a name=\"omim-OMIM.58163950\"> </a></td><td>NOONAN SYNDROME 1; NS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:178110<a name=\"omim-OMIM.58178110\"> </a></td><td>CONTRACTURES, PTERYGIA, AND SPONDYLOCARPOTARSAL FUSION SYNDROME 1A; CPSFS1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:178500<a name=\"omim-OMIM.58178500\"> </a></td><td>PULMONARY FIBROSIS, IDIOPATHIC; IPF</td></tr><tr><td style=\"white-space:nowrap\">OMIM:180100<a name=\"omim-OMIM.58180100\"> </a></td><td>RETINITIS PIGMENTOSA 1; RP1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:180849<a name=\"omim-OMIM.58180849\"> </a></td><td>RUBINSTEIN-TAYBI SYNDROME 1; RSTS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:181430<a name=\"omim-OMIM.58181430\"> </a></td><td>SCAPULOPERONEAL MYOPATHY, MYH7-RELATED; SPMM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:182601<a name=\"omim-OMIM.58182601\"> </a></td><td>SPASTIC PARAPLEGIA 4, AUTOSOMAL DOMINANT; SPG4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:188000<a name=\"omim-OMIM.58188000\"> </a></td><td>THROMBOCYTOPENIA 2; THC2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:191480<a name=\"omim-OMIM.58191480\"> </a></td><td>UNCOMBABLE HAIR SYNDROME 1; UHS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:203800<a name=\"omim-OMIM.58203800\"> </a></td><td>ALSTROM SYNDROME; ALMS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:204200<a name=\"omim-OMIM.58204200\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 3; CLN3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:204500<a name=\"omim-OMIM.58204500\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 2; CLN2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:205100<a name=\"omim-OMIM.58205100\"> </a></td><td>AMYOTROPHIC LATERAL SCLEROSIS 2, JUVENILE; ALS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:206900<a name=\"omim-OMIM.58206900\"> </a></td><td>MICROPHTHALMIA, SYNDROMIC 3; MCOPS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:208900<a name=\"omim-OMIM.58208900\"> </a></td><td>ATAXIA-TELANGIECTASIA; AT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:209850<a name=\"omim-OMIM.58209850\"> </a></td><td>AUTISM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:209900<a name=\"omim-OMIM.58209900\"> </a></td><td>BARDET-BIEDL SYNDROME 1; BBS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:210000<a name=\"omim-OMIM.58210000\"> </a></td><td>BEHR SYNDROME; BEHRS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:210720<a name=\"omim-OMIM.58210720\"> </a></td><td>MICROCEPHALIC OSTEODYSPLASTIC PRIMORDIAL DWARFISM, TYPE II; MOPD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:210900<a name=\"omim-OMIM.58210900\"> </a></td><td>BLOOM SYNDROME; BLM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:212065<a name=\"omim-OMIM.58212065\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ia; CDG1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:212066<a name=\"omim-OMIM.58212066\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIa; CDG2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:214500<a name=\"omim-OMIM.58214500\"> </a></td><td>CHEDIAK-HIGASHI SYNDROME; CHS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:214800<a name=\"omim-OMIM.58214800\"> </a></td><td>CHARGE SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:215500<a name=\"omim-OMIM.58215500\"> </a></td><td>CHOROIDAL DYSTROPHY, CENTRAL AREOLAR, 1; CACD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:216400<a name=\"omim-OMIM.58216400\"> </a></td><td>COCKAYNE SYNDROME A; CSA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:216550<a name=\"omim-OMIM.58216550\"> </a></td><td>COHEN SYNDROME; COH1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:217080<a name=\"omim-OMIM.58217080\"> </a></td><td>JALILI SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:217980<a name=\"omim-OMIM.58217980\"> </a></td><td>CORPUS CALLOSUM, AGENESIS OF, WITH FACIAL ANOMALIES AND ROBIN SEQUENCE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:218340<a name=\"omim-OMIM.58218340\"> </a></td><td>TEMTAMY SYNDROME; TEMTYS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:219200<a name=\"omim-OMIM.58219200\"> </a></td><td>CUTIS LAXA, AUTOSOMAL RECESSIVE, TYPE IIA; ARCL2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:224050<a name=\"omim-OMIM.58224050\"> </a></td><td>CEREBELLAR ATAXIA, MENTAL RETARDATION, AND DYSEQUILIBRIUM SYNDROME 1; CAMRQ1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:224690<a name=\"omim-OMIM.58224690\"> </a></td><td>MEIER-GORLIN SYNDROME 1; MGORS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:225753<a name=\"omim-OMIM.58225753\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 4; PCH4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:225790<a name=\"omim-OMIM.58225790\"> </a></td><td>PROLIFERATIVE VASCULOPATHY AND HYDRANENCEPHALY-HYDROCEPHALY SYNDROME; PVHH</td></tr><tr><td style=\"white-space:nowrap\">OMIM:227650<a name=\"omim-OMIM.58227650\"> </a></td><td>FANCONI ANEMIA, COMPLEMENTATION GROUP A; FANCA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:229600<a name=\"omim-OMIM.58229600\"> </a></td><td>FRUCTOSE INTOLERANCE, HEREDITARY; HFI</td></tr><tr><td style=\"white-space:nowrap\">OMIM:230000<a name=\"omim-OMIM.58230000\"> </a></td><td>FUCOSIDOSIS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:230500<a name=\"omim-OMIM.58230500\"> </a></td><td>GM1-GANGLIOSIDOSIS, TYPE I</td></tr><tr><td style=\"white-space:nowrap\">OMIM:232300<a name=\"omim-OMIM.58232300\"> </a></td><td>GLYCOGEN STORAGE DISEASE II; GSD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:232600<a name=\"omim-OMIM.58232600\"> </a></td><td>GLYCOGEN STORAGE DISEASE V; GSD5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:234200<a name=\"omim-OMIM.58234200\"> </a></td><td>NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 1; NBIA1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:234500<a name=\"omim-OMIM.58234500\"> </a></td><td>HARTNUP DISORDER; HND</td></tr><tr><td style=\"white-space:nowrap\">OMIM:236000<a name=\"omim-OMIM.58236000\"> </a></td><td>LYMPHOMA, HODGKIN, CLASSIC; CHL</td></tr><tr><td style=\"white-space:nowrap\">OMIM:236600<a name=\"omim-OMIM.58236600\"> </a></td><td>HYDROCEPHALUS, CONGENITAL, 1; HYC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:236792<a name=\"omim-OMIM.58236792\"> </a></td><td>L-2-HYDROXYGLUTARIC ACIDURIA; L2HGA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:243310<a name=\"omim-OMIM.58243310\"> </a></td><td>BARAITSER-WINTER SYNDROME 1; BRWS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:244450<a name=\"omim-OMIM.58244450\"> </a></td><td>KAUFMAN OCULOCEREBROFACIAL SYNDROME; KOS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:245200<a name=\"omim-OMIM.58245200\"> </a></td><td>KRABBE DISEASE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:245359<a name=\"omim-OMIM.58245359\"> </a></td><td>missing</td></tr><tr><td style=\"white-space:nowrap\">OMIM:248200<a name=\"omim-OMIM.58248200\"> </a></td><td>STARGARDT DISEASE 1; STGD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:248700<a name=\"omim-OMIM.58248700\"> </a></td><td>MARDEN-WALKER SYNDROME; MWKS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:249000<a name=\"omim-OMIM.58249000\"> </a></td><td>MECKEL SYNDROME, TYPE 1; MKS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:249900<a name=\"omim-OMIM.58249900\"> </a></td><td>METACHROMATIC LEUKODYSTROPHY DUE TO SAPOSIN B DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:250100<a name=\"omim-OMIM.58250100\"> </a></td><td>METACHROMATIC LEUKODYSTROPHY; MLD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:250620<a name=\"omim-OMIM.58250620\"> </a></td><td>3-HYDROXYISOBUTYRYL-CoA HYDROLASE DEFICIENCY; HIBCHD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251200<a name=\"omim-OMIM.58251200\"> </a></td><td>MICROCEPHALY 1, PRIMARY, AUTOSOMAL RECESSIVE; MCPH1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251260<a name=\"omim-OMIM.58251260\"> </a></td><td>NIJMEGEN BREAKAGE SYNDROME; NBS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251280<a name=\"omim-OMIM.58251280\"> </a></td><td>DIENCEPHALIC-MESENCEPHALIC JUNCTION DYSPLASIA SYNDROME 1; DMJDS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251290<a name=\"omim-OMIM.58251290\"> </a></td><td>PSEUDO-TORCH SYNDROME 1; PTORCH1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251300<a name=\"omim-OMIM.58251300\"> </a></td><td>GALLOWAY-MOWAT SYNDROME 1; GAMOS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:252010<a name=\"omim-OMIM.58252010\"> </a></td><td>MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 1; MC1DN1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:252160<a name=\"omim-OMIM.58252160\"> </a></td><td>MOLYBDENUM COFACTOR DEFICIENCY, COMPLEMENTATION GROUP B; MOCODB</td></tr><tr><td style=\"white-space:nowrap\">OMIM:252920<a name=\"omim-OMIM.58252920\"> </a></td><td>MUCOPOLYSACCHARIDOSIS, TYPE IIIB; MPS3B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:253250<a name=\"omim-OMIM.58253250\"> </a></td><td>MULIBREY NANISM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:253600<a name=\"omim-OMIM.58253600\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 1; LGMDR1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:253601<a name=\"omim-OMIM.58253601\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 2; LGMDR2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:253700<a name=\"omim-OMIM.58253700\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 5; LGMDR5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254090<a name=\"omim-OMIM.58254090\"> </a></td><td>ULLRICH CONGENITAL MUSCULAR DYSTROPHY 1; UCMD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254110<a name=\"omim-OMIM.58254110\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 8; LGMDR8</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254300<a name=\"omim-OMIM.58254300\"> </a></td><td>MYASTHENIC SYNDROME, CONGENITAL, 10; CMS10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254780<a name=\"omim-OMIM.58254780\"> </a></td><td>MYOCLONIC EPILEPSY OF LAFORA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254940<a name=\"omim-OMIM.58254940\"> </a></td><td>CAREY-FINEMAN-ZITER SYNDROME; CFZS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:255310<a name=\"omim-OMIM.58255310\"> </a></td><td>MYOPATHY, CONGENITAL, WITH FIBER-TYPE DISPROPORTION; CFTD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:255320<a name=\"omim-OMIM.58255320\"> </a></td><td>MINICORE MYOPATHY WITH EXTERNAL OPHTHALMOPLEGIA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:255800<a name=\"omim-OMIM.58255800\"> </a></td><td>SCHWARTZ-JAMPEL SYNDROME, TYPE 1; SJS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256000<a name=\"omim-OMIM.58256000\"> </a></td><td>LEIGH SYNDROME; LS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256300<a name=\"omim-OMIM.58256300\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 1; NPHS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256600<a name=\"omim-OMIM.58256600\"> </a></td><td>NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 2A; NBIA2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256700<a name=\"omim-OMIM.58256700\"> </a></td><td>NEUROBLASTOMA, SUSCEPTIBILITY TO, 1; NBLST1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256730<a name=\"omim-OMIM.58256730\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 1; CLN1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256731<a name=\"omim-OMIM.58256731\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 5; CLN5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256800<a name=\"omim-OMIM.58256800\"> </a></td><td>INSENSITIVITY TO PAIN, CONGENITAL, WITH ANHIDROSIS; CIPA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256850<a name=\"omim-OMIM.58256850\"> </a></td><td>GIANT AXONAL NEUROPATHY 1, AUTOSOMAL RECESSIVE; GAN1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:257220<a name=\"omim-OMIM.58257220\"> </a></td><td>NIEMANN-PICK DISEASE, TYPE C1; NPC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:257320<a name=\"omim-OMIM.58257320\"> </a></td><td>LISSENCEPHALY 2; LIS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:260400<a name=\"omim-OMIM.58260400\"> </a></td><td>SHWACHMAN-DIAMOND SYNDROME 1; SDS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:260565<a name=\"omim-OMIM.58260565\"> </a></td><td>PEHO SYNDROME; PEHO</td></tr><tr><td style=\"white-space:nowrap\">OMIM:261630<a name=\"omim-OMIM.58261630\"> </a></td><td>HYPERPHENYLALANINEMIA, BH4-DEFICIENT, C; HPABH4C</td></tr><tr><td style=\"white-space:nowrap\">OMIM:262500<a name=\"omim-OMIM.58262500\"> </a></td><td>LARON SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:263200<a name=\"omim-OMIM.58263200\"> </a></td><td>POLYCYSTIC KIDNEY DISEASE 4 WITH OR WITHOUT POLYCYSTIC LIVER DISEASE; PKD4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:265000<a name=\"omim-OMIM.58265000\"> </a></td><td>MULTIPLE PTERYGIUM SYNDROME, ESCOBAR VARIANT; EVMPS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:266100<a name=\"omim-OMIM.58266100\"> </a></td><td>EPILEPSY, PYRIDOXINE-DEPENDENT; EPD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:266265<a name=\"omim-OMIM.58266265\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIc; CDG2C</td></tr><tr><td style=\"white-space:nowrap\">OMIM:266500<a name=\"omim-OMIM.58266500\"> </a></td><td>REFSUM DISEASE, CLASSIC</td></tr><tr><td style=\"white-space:nowrap\">OMIM:266510<a name=\"omim-OMIM.58266510\"> </a></td><td>PEROXISOME BIOGENESIS DISORDER 3B; PBD3B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:268800<a name=\"omim-OMIM.58268800\"> </a></td><td>SANDHOFF DISEASE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:270200<a name=\"omim-OMIM.58270200\"> </a></td><td>SJOGREN-LARSSON SYNDROME; SLS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:270800<a name=\"omim-OMIM.58270800\"> </a></td><td>SPASTIC PARAPLEGIA 5A, AUTOSOMAL RECESSIVE; SPG5A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:271900<a name=\"omim-OMIM.58271900\"> </a></td><td>CANAVAN DISEASE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:272800<a name=\"omim-OMIM.58272800\"> </a></td><td>TAY-SACHS DISEASE; TSD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:273300<a name=\"omim-OMIM.58273300\"> </a></td><td>TESTICULAR GERM CELL TUMOR; TGCT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:274000<a name=\"omim-OMIM.58274000\"> </a></td><td>THROMBOCYTOPENIA-ABSENT RADIUS SYNDROME; TAR</td></tr><tr><td style=\"white-space:nowrap\">OMIM:276901<a name=\"omim-OMIM.58276901\"> </a></td><td>USHER SYNDROME, TYPE IIA; USH2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:277470<a name=\"omim-OMIM.58277470\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 2A; PCH2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300029<a name=\"omim-OMIM.58300029\"> </a></td><td>RETINITIS PIGMENTOSA 3; RP3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300067<a name=\"omim-OMIM.58300067\"> </a></td><td>LISSENCEPHALY, X-LINKED, 1; LISX1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300088<a name=\"omim-OMIM.58300088\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 9; DEE9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300100<a name=\"omim-OMIM.58300100\"> </a></td><td>ADRENOLEUKODYSTROPHY; ALD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300376<a name=\"omim-OMIM.58300376\"> </a></td><td>MUSCULAR DYSTROPHY, BECKER TYPE; BMD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300387<a name=\"omim-OMIM.58300387\"> </a></td><td>MENTAL RETARDATION, X-LINKED 63; MRX63</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300476<a name=\"omim-OMIM.58300476\"> </a></td><td>CONE-ROD DYSTROPHY, X-LINKED, 3; CORDX3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300486<a name=\"omim-OMIM.58300486\"> </a></td><td>MENTAL RETARDATION, X-LINKED, WITH CEREBELLAR HYPOPLASIA AND DISTINCTIVE FACIAL APPEARANCE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300495<a name=\"omim-OMIM.58300495\"> </a></td><td>AUTISM, SUSCEPTIBILITY TO, X-LINKED 2; AUTSX2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300523<a name=\"omim-OMIM.58300523\"> </a></td><td>ALLAN-HERNDON-DUDLEY SYNDROME; AHDS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300534<a name=\"omim-OMIM.58300534\"> </a></td><td>MENTAL RETARDATION, X-LINKED, SYNDROMIC, CLAES-JENSEN TYPE; MRXSCJ</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300695<a name=\"omim-OMIM.58300695\"> </a></td><td>SCAPULOPERONEAL MYOPATHY, X-LINKED DOMINANT; SPM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300749<a name=\"omim-OMIM.58300749\"> </a></td><td>MENTAL RETARDATION AND MICROCEPHALY WITH PONTINE AND CEREBELLAR HYPOPLASIA; MICPCH</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300804<a name=\"omim-OMIM.58300804\"> </a></td><td>JOUBERT SYNDROME 10; JBTS10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300881<a name=\"omim-OMIM.58300881\"> </a></td><td>MOVED TO 615777</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300882<a name=\"omim-OMIM.58300882\"> </a></td><td>CORNELIA DE LANGE SYNDROME 5; CDLS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300894<a name=\"omim-OMIM.58300894\"> </a></td><td>NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 5; NBIA5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300908<a name=\"omim-OMIM.58300908\"> </a></td><td>ANEMIA, NONSPHEROCYTIC HEMOLYTIC, DUE TO G6PD DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300957<a name=\"omim-OMIM.58300957\"> </a></td><td>MENTAL RETARDATION, X-LINKED 12; MRX12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300958<a name=\"omim-OMIM.58300958\"> </a></td><td>INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED, SYNDROMIC, SNIJDERS BLOK TYPE; MRXSSB</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300966<a name=\"omim-OMIM.58300966\"> </a></td><td>MENTAL RETARDATION, X-LINKED, SYNDROMIC 33; MRXS33</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300968<a name=\"omim-OMIM.58300968\"> </a></td><td>MENTAL RETARDATION, X-LINKED 99, SYNDROMIC, FEMALE-RESTRICTED; MRXS99F</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300983<a name=\"omim-OMIM.58300983\"> </a></td><td>MENTAL RETARDATION, X-LINKED 104; MRX104</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300986<a name=\"omim-OMIM.58300986\"> </a></td><td>MENTAL RETARDATION, X-LINKED, SYNDROMIC, BAIN TYPE; MRXSB</td></tr><tr><td style=\"white-space:nowrap\">OMIM:301050<a name=\"omim-OMIM.58301050\"> </a></td><td>ALPORT SYNDROME 1, X-LINKED; ATS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:301310<a name=\"omim-OMIM.58301310\"> </a></td><td>ANEMIA, SIDEROBLASTIC, AND SPINOCEREBELLAR ATAXIA; ASAT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:304340<a name=\"omim-OMIM.58304340\"> </a></td><td>PETTIGREW SYNDROME; PGS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:305100<a name=\"omim-OMIM.58305100\"> </a></td><td>ECTODERMAL DYSPLASIA 1, HYPOHIDROTIC, X-LINKED; XHED</td></tr><tr><td style=\"white-space:nowrap\">OMIM:308350<a name=\"omim-OMIM.58308350\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 1; DEE1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:309500<a name=\"omim-OMIM.58309500\"> </a></td><td>RENPENNING SYNDROME 1; RENS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:309541<a name=\"omim-OMIM.58309541\"> </a></td><td>METHYLMALONIC ACIDEMIA AND HOMOCYSTEINEMIA, cblX TYPE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:309580<a name=\"omim-OMIM.58309580\"> </a></td><td>MENTAL RETARDATION-HYPOTONIC FACIES SYNDROME, X-LINKED, 1; MRXHF1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:310468<a name=\"omim-OMIM.58310468\"> </a></td><td>NEPHROLITHIASIS, X-LINKED RECESSIVE, WITH RENAL FAILURE; XRN</td></tr><tr><td style=\"white-space:nowrap\">OMIM:311070<a name=\"omim-OMIM.58311070\"> </a></td><td>CHARCOT-MARIE-TOOTH DISEASE, X-LINKED RECESSIVE, 5; CMTX5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:313850<a name=\"omim-OMIM.58313850\"> </a></td><td>THORACOABDOMINAL SYNDROME; THAS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:314580<a name=\"omim-OMIM.58314580\"> </a></td><td>WIEACKER-WOLFF SYNDROME; WRWF</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600059<a name=\"omim-OMIM.58600059\"> </a></td><td>RETINITIS PIGMENTOSA 13; RP13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600105<a name=\"omim-OMIM.58600105\"> </a></td><td>RETINITIS PIGMENTOSA 12; RP12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600118<a name=\"omim-OMIM.58600118\"> </a></td><td>WARBURG MICRO SYNDROME 1; WARBM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600132<a name=\"omim-OMIM.58600132\"> </a></td><td>RETINITIS PIGMENTOSA 14; RP14</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600138<a name=\"omim-OMIM.58600138\"> </a></td><td>RETINITIS PIGMENTOSA 11; RP11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600143<a name=\"omim-OMIM.58600143\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 8; CLN8</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600334<a name=\"omim-OMIM.58600334\"> </a></td><td>TIBIAL MUSCULAR DYSTROPHY, TARDIVE; TMD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600373<a name=\"omim-OMIM.58600373\"> </a></td><td>CODAS SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600618<a name=\"omim-OMIM.58600618\"> </a></td><td>ETS VARIANT GENE 6; ETV6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600995<a name=\"omim-OMIM.58600995\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 2; NPHS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601088<a name=\"omim-OMIM.58601088\"> </a></td><td>AYME-GRIPP SYNDROME; AYGRP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601414<a name=\"omim-OMIM.58601414\"> </a></td><td>RETINITIS PIGMENTOSA 18; RP18</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601419<a name=\"omim-OMIM.58601419\"> </a></td><td>MYOPATHY, MYOFIBRILLAR, 1; MFM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601680<a name=\"omim-OMIM.58601680\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, TYPE 2B1; DA2B1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601718<a name=\"omim-OMIM.58601718\"> </a></td><td>RETINITIS PIGMENTOSA 19; RP19</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601780<a name=\"omim-OMIM.58601780\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 6; CLN6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601815<a name=\"omim-OMIM.58601815\"> </a></td><td>PHOSPHOGLYCERATE DEHYDROGENASE DEFICIENCY; PHGDHD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601954<a name=\"omim-OMIM.58601954\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 7; LGMDR7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:602482<a name=\"omim-OMIM.58602482\"> </a></td><td>AXENFELD-RIEGER SYNDROME, TYPE 3; RIEG3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:602579<a name=\"omim-OMIM.58602579\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ib; CDG1B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:602772<a name=\"omim-OMIM.58602772\"> </a></td><td>RETINITIS PIGMENTOSA 25; RP25</td></tr><tr><td style=\"white-space:nowrap\">OMIM:603511<a name=\"omim-OMIM.58603511\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL DOMINANT 1; LGMDD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:603896<a name=\"omim-OMIM.58603896\"> </a></td><td>LEUKOENCEPHALOPATHY WITH VANISHING WHITE MATTER; VWM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604004<a name=\"omim-OMIM.58604004\"> </a></td><td>MEGALENCEPHALIC LEUKOENCEPHALOPATHY WITH SUBCORTICAL CYSTS 1; MLC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604116<a name=\"omim-OMIM.58604116\"> </a></td><td>CONE-ROD DYSTROPHY 3; CORD3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604273<a name=\"omim-OMIM.58604273\"> </a></td><td>MITOCHONDRIAL COMPLEX V (ATP SYNTHASE) DEFICIENCY, NUCLEAR TYPE 1; MC5DN1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604286<a name=\"omim-OMIM.58604286\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 4; LGMDR4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604317<a name=\"omim-OMIM.58604317\"> </a></td><td>MICROCEPHALY 2, PRIMARY, AUTOSOMAL RECESSIVE, WITH OR WITHOUT CORTICAL MALFORMATIONS; MCPH2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604360<a name=\"omim-OMIM.58604360\"> </a></td><td>SPASTIC PARAPLEGIA 11, AUTOSOMAL RECESSIVE; SPG11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604387<a name=\"omim-OMIM.58604387\"> </a></td><td>NEPHRONOPHTHISIS 3; NPHP3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604537<a name=\"omim-OMIM.58604537\"> </a></td><td>LEBER CONGENITAL AMAUROSIS 5; LCA5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604592<a name=\"omim-OMIM.58604592\"> </a></td><td>T CELL IMMUNE REGULATOR 1; TCIRG1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605130<a name=\"omim-OMIM.58605130\"> </a></td><td>WIEDEMANN-STEINER SYNDROME; WDSTS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605355<a name=\"omim-OMIM.58605355\"> </a></td><td>NEMALINE MYOPATHY 5; NEM5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605407<a name=\"omim-OMIM.58605407\"> </a></td><td>SEGAWA SYNDROME, AUTOSOMAL RECESSIVE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605637<a name=\"omim-OMIM.58605637\"> </a></td><td>MYOPATHY, PROXIMAL, WITH OPHTHALMOPLEGIA; MYPOP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605670<a name=\"omim-OMIM.58605670\"> </a></td><td>LATE-ONSET RETINAL DEGENERATION; LORD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605820<a name=\"omim-OMIM.58605820\"> </a></td><td>NONAKA MYOPATHY; NM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605899<a name=\"omim-OMIM.58605899\"> </a></td><td>GLYCINE ENCEPHALOPATHY; GCE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606068<a name=\"omim-OMIM.58606068\"> </a></td><td>RETINITIS PIGMENTOSA 28; RP28</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606170<a name=\"omim-OMIM.58606170\"> </a></td><td>GENITOPATELLAR SYNDROME; GTPTS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606232<a name=\"omim-OMIM.58606232\"> </a></td><td>PHELAN-MCDERMID SYNDROME; PHMDS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606777<a name=\"omim-OMIM.58606777\"> </a></td><td>GLUT1 DEFICIENCY SYNDROME 1; GLUT1DS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606854<a name=\"omim-OMIM.58606854\"> </a></td><td>POLYMICROGYRIA, BILATERAL FRONTOPARIETAL; BFPP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606966<a name=\"omim-OMIM.58606966\"> </a></td><td>NEPHRONOPHTHISIS 4; NPHP4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606996<a name=\"omim-OMIM.58606996\"> </a></td><td>SENIOR-LOKEN SYNDROME 4; SLSN4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607015<a name=\"omim-OMIM.58607015\"> </a></td><td>HURLER-SCHEIE SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607155<a name=\"omim-OMIM.58607155\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 5; MDDGC5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607196<a name=\"omim-OMIM.58607196\"> </a></td><td>MICROCEPHALY, AMISH TYPE; MCPHA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607225<a name=\"omim-OMIM.58607225\"> </a></td><td>SPASTIC PARALYSIS, INFANTILE-ONSET ASCENDING; IAHSP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607426<a name=\"omim-OMIM.58607426\"> </a></td><td>COENZYME Q10 DEFICIENCY, PRIMARY, 1; COQ10D1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607432<a name=\"omim-OMIM.58607432\"> </a></td><td>LISSENCEPHALY 1; LIS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607483<a name=\"omim-OMIM.58607483\"> </a></td><td>THIAMINE METABOLISM DYSFUNCTION SYNDROME 2 (BIOTIN- OR THIAMINE-RESPONSIVE TYPE); THMD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607595<a name=\"omim-OMIM.58607595\"> </a></td><td>MOVED TO 175780</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607596<a name=\"omim-OMIM.58607596\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 1A; PCH1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607855<a name=\"omim-OMIM.58607855\"> </a></td><td>MUSCULAR DYSTROPHY, CONGENITAL MEROSIN-DEFICIENT, 1A; MDC1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608027<a name=\"omim-OMIM.58608027\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 3; PCH3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608091<a name=\"omim-OMIM.58608091\"> </a></td><td>JOUBERT SYNDROME 2; JBTS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608099<a name=\"omim-OMIM.58608099\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 3; LGMDR3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608133<a name=\"omim-OMIM.58608133\"> </a></td><td>RETINITIS PIGMENTOSA 7; RP7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608358<a name=\"omim-OMIM.58608358\"> </a></td><td>MYOPATHY, MYOSIN STORAGE, AUTOSOMAL DOMINANT; MSMA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608380<a name=\"omim-OMIM.58608380\"> </a></td><td>RETINITIS PIGMENTOSA 26; RP26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608393<a name=\"omim-OMIM.58608393\"> </a></td><td>MICROCEPHALY 6, PRIMARY, AUTOSOMAL RECESSIVE; MCPH6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608415<a name=\"omim-OMIM.58608415\"> </a></td><td>PROLONGED ELECTRORETINAL RESPONSE SUPPRESSION; PERRS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608423<a name=\"omim-OMIM.58608423\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL DOMINANT 2; LGMDD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608540<a name=\"omim-OMIM.58608540\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ik; CDG1K</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608629<a name=\"omim-OMIM.58608629\"> </a></td><td>JOUBERT SYNDROME 3; JBTS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608643<a name=\"omim-OMIM.58608643\"> </a></td><td>AROMATIC L-AMINO ACID DECARBOXYLASE DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608716<a name=\"omim-OMIM.58608716\"> </a></td><td>MICROCEPHALY 5, PRIMARY, AUTOSOMAL RECESSIVE; MCPH5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608804<a name=\"omim-OMIM.58608804\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 2; HLD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608807<a name=\"omim-OMIM.58608807\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 10; LGMDR10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609033<a name=\"omim-OMIM.58609033\"> </a></td><td>POSTERIOR COLUMN ATAXIA WITH RETINITIS PIGMENTOSA; AXPC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609056<a name=\"omim-OMIM.58609056\"> </a></td><td>SALT AND PEPPER DEVELOPMENTAL REGRESSION SYNDROME; SPDRS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609195<a name=\"omim-OMIM.58609195\"> </a></td><td>SPASTIC PARAPLEGIA 26, AUTOSOMAL RECESSIVE; SPG26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609200<a name=\"omim-OMIM.58609200\"> </a></td><td>MYOPATHY, MYOFIBRILLAR, 3; MFM3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609260<a name=\"omim-OMIM.58609260\"> </a></td><td>CHARCOT-MARIE-TOOTH DISEASE, AXONAL, AUTOSOMAL DOMINANT, TYPE 2A2A; CMT2A2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609270<a name=\"omim-OMIM.58609270\"> </a></td><td>SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 7; SCAR7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609304<a name=\"omim-OMIM.58609304\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 3; DEE3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609524<a name=\"omim-OMIM.58609524\"> </a></td><td>MYOPATHY, MYOFIBRILLAR, 5; MFM5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609560<a name=\"omim-OMIM.58609560\"> </a></td><td>MITOCHONDRIAL DNA DEPLETION SYNDROME 2 (MYOPATHIC TYPE); MTDPS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609923<a name=\"omim-OMIM.58609923\"> </a></td><td>RETINITIS PIGMENTOSA 31; RP31</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610019<a name=\"omim-OMIM.58610019\"> </a></td><td>CATARACT 18; CTRCT18</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610031<a name=\"omim-OMIM.58610031\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 7; CDCBM7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610127<a name=\"omim-OMIM.58610127\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 10; CLN10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610181<a name=\"omim-OMIM.58610181\"> </a></td><td>AICARDI-GOUTIERES SYNDROME 2; AGS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610188<a name=\"omim-OMIM.58610188\"> </a></td><td>JOUBERT SYNDROME 5; JBTS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610217<a name=\"omim-OMIM.58610217\"> </a></td><td>NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 2B; NBIA2B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610329<a name=\"omim-OMIM.58610329\"> </a></td><td>AICARDI-GOUTIERES SYNDROME 3; AGS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610333<a name=\"omim-OMIM.58610333\"> </a></td><td>AICARDI-GOUTIERES SYNDROME 4; AGS4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610359<a name=\"omim-OMIM.58610359\"> </a></td><td>RETINITIS PIGMENTOSA 33; RP33</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610443<a name=\"omim-OMIM.58610443\"> </a></td><td>KOOLEN-DE VRIES SYNDROME; KDVS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610444<a name=\"omim-OMIM.58610444\"> </a></td><td>NIGHT BLINDNESS, CONGENITAL STATIONARY, AUTOSOMAL DOMINANT 3; CSNBAD3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610489<a name=\"omim-OMIM.58610489\"> </a></td><td>PIGMENTED NODULAR ADRENOCORTICAL DISEASE, PRIMARY, 1; PPNAD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610532<a name=\"omim-OMIM.58610532\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 5; HLD5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610688<a name=\"omim-OMIM.58610688\"> </a></td><td>JOUBERT SYNDROME 6; JBTS6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610725<a name=\"omim-OMIM.58610725\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 3; NPHS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610951<a name=\"omim-OMIM.58610951\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 7; CLN7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611091<a name=\"omim-OMIM.58611091\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL RECESSIVE 5; MRT5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611302<a name=\"omim-OMIM.58611302\"> </a></td><td>SPASTIC ATAXIA 2, AUTOSOMAL RECESSIVE; SPAX2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611307<a name=\"omim-OMIM.58611307\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 12; LGMDR12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611560<a name=\"omim-OMIM.58611560\"> </a></td><td>JOUBERT SYNDROME 7; JBTS7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611603<a name=\"omim-OMIM.58611603\"> </a></td><td>LISSENCEPHALY 3; LIS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611705<a name=\"omim-OMIM.58611705\"> </a></td><td>SALIH MYOPATHY; SALMY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611721<a name=\"omim-OMIM.58611721\"> </a></td><td>COMBINED SAPOSIN DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611726<a name=\"omim-OMIM.58611726\"> </a></td><td>EPILEPSY, PROGRESSIVE MYOCLONIC, 3, WITH OR WITHOUT INTRACELLULAR INCLUSIONS; EPM3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611755<a name=\"omim-OMIM.58611755\"> </a></td><td>LEBER CONGENITAL AMAUROSIS 10; LCA10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612015<a name=\"omim-OMIM.58612015\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE In; CDG1N</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612095<a name=\"omim-OMIM.58612095\"> </a></td><td>RETINITIS PIGMENTOSA 41; RP41</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612126<a name=\"omim-OMIM.58612126\"> </a></td><td>GLUT1 DEFICIENCY SYNDROME 2; GLUT1DS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612285<a name=\"omim-OMIM.58612285\"> </a></td><td>JOUBERT SYNDROME 9; JBTS9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612337<a name=\"omim-OMIM.58612337\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 22; MRD22</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612370<a name=\"omim-OMIM.58612370\"> </a></td><td>HYPOGONADOTROPIC HYPOGONADISM 5 WITH OR WITHOUT ANOSMIA; HH5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612438<a name=\"omim-OMIM.58612438\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 6; HLD6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612528<a name=\"omim-OMIM.58612528\"> </a></td><td>DIAMOND-BLACKFAN ANEMIA 5; DBA5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612621<a name=\"omim-OMIM.58612621\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 5; MRD5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612712<a name=\"omim-OMIM.58612712\"> </a></td><td>LEBER CONGENITAL AMAUROSIS 13; LCA13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612716<a name=\"omim-OMIM.58612716\"> </a></td><td>DYSTONIA, DOPA-RESPONSIVE, DUE TO SEPIAPTERIN REDUCTASE DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612780<a name=\"omim-OMIM.58612780\"> </a></td><td>SEIZURES, SENSORINEURAL DEAFNESS, ATAXIA, MENTAL RETARDATION, AND ELECTROLYTE IMBALANCE; SESAMES</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612936<a name=\"omim-OMIM.58612936\"> </a></td><td>SPASTIC PARAPLEGIA 50, AUTOSOMAL RECESSIVE; SPG50</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612943<a name=\"omim-OMIM.58612943\"> </a></td><td>RETINITIS PIGMENTOSA 42; RP42</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612951<a name=\"omim-OMIM.58612951\"> </a></td><td>LEUKOENCEPHALOPATHY, CYSTIC, WITHOUT MEGALENCEPHALY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613065<a name=\"omim-OMIM.58613065\"> </a></td><td>LEUKEMIA, ACUTE LYMPHOBLASTIC; ALL</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613091<a name=\"omim-OMIM.58613091\"> </a></td><td>SHORT-RIB THORACIC DYSPLASIA 3 WITH OR WITHOUT POLYDACTYLY; SRTD3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613155<a name=\"omim-OMIM.58613155\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH IMPAIRED INTELLECTUAL IMPAIRMENT), TYPE B, 1; MDDGB1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613156<a name=\"omim-OMIM.58613156\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH IMPAIRED INTELLECTUAL DEVELOPMENT), TYPE B, 2; MDDGB2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613158<a name=\"omim-OMIM.58613158\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 2; MDDGC2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613192<a name=\"omim-OMIM.58613192\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL RECESSIVE 13; MRT13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613205<a name=\"omim-OMIM.58613205\"> </a></td><td>MUSCULAR DYSTROPHY, CONGENITAL, LMNA-RELATED</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613216<a name=\"omim-OMIM.58613216\"> </a></td><td>NIGHT BLINDNESS, CONGENITAL STATIONARY, TYPE 1C; CSNB1C</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613217<a name=\"omim-OMIM.58613217\"> </a></td><td>DIARRHEA 5, WITH TUFTING ENTEROPATHY, CONGENITAL; DIAR5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613402<a name=\"omim-OMIM.58613402\"> </a></td><td>MICROCEPHALY, SEIZURES, AND DEVELOPMENTAL DELAY; MCSZ</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613428<a name=\"omim-OMIM.58613428\"> </a></td><td>RETINITIS PIGMENTOSA 54; RP54</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613454<a name=\"omim-OMIM.58613454\"> </a></td><td>RETT SYNDROME, CONGENITAL VARIANT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613550<a name=\"omim-OMIM.58613550\"> </a></td><td>NEPHRONOPHTHISIS 11; NPHP11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613561<a name=\"omim-OMIM.58613561\"> </a></td><td>MYOPATHY, LACTIC ACIDOSIS, AND SIDEROBLASTIC ANEMIA 2; MLASA2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613587<a name=\"omim-OMIM.58613587\"> </a></td><td>OCCULT MACULAR DYSTROPHY; OCMD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613612<a name=\"omim-OMIM.58613612\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIi; CDG2I</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613660<a name=\"omim-OMIM.58613660\"> </a></td><td>CONE-ROD DYSTROPHY 15; CORD15</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613668<a name=\"omim-OMIM.58613668\"> </a></td><td>MICROCEPHALY, POSTNATAL PROGRESSIVE, WITH SEIZURES AND BRAIN ATROPHY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613680<a name=\"omim-OMIM.58613680\"> </a></td><td>BEAULIEU-BOYCOTT-INNES SYNDROME; BBIS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613684<a name=\"omim-OMIM.58613684\"> </a></td><td>RUBINSTEIN-TAYBI SYNDROME 2; RSTS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613690<a name=\"omim-OMIM.58613690\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 7; CMH7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613706<a name=\"omim-OMIM.58613706\"> </a></td><td>NOONAN SYNDROME 7; NS7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613722<a name=\"omim-OMIM.58613722\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 12; DEE12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613731<a name=\"omim-OMIM.58613731\"> </a></td><td>RETINITIS PIGMENTOSA 4; RP4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613744<a name=\"omim-OMIM.58613744\"> </a></td><td>SPASTIC PARAPLEGIA 51, AUTOSOMAL RECESSIVE; SPG51</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613750<a name=\"omim-OMIM.58613750\"> </a></td><td>RETINITIS PIGMENTOSA 27; RP27</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613756<a name=\"omim-OMIM.58613756\"> </a></td><td>RETINITIS PIGMENTOSA 49; RP49</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613767<a name=\"omim-OMIM.58613767\"> </a></td><td>RETINITIS PIGMENTOSA 45; RP45</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613794<a name=\"omim-OMIM.58613794\"> </a></td><td>RETINITIS PIGMENTOSA 20; RP20</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613809<a name=\"omim-OMIM.58613809\"> </a></td><td>RETINITIS PIGMENTOSA 39; RP39</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613810<a name=\"omim-OMIM.58613810\"> </a></td><td>RETINITIS PIGMENTOSA 43; RP43</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613811<a name=\"omim-OMIM.58613811\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 2D; PCH2D</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613820<a name=\"omim-OMIM.58613820\"> </a></td><td>NEPHRONOPHTHISIS 12; NPHP12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613835<a name=\"omim-OMIM.58613835\"> </a></td><td>LEBER CONGENITAL AMAUROSIS 8; LCA8</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613861<a name=\"omim-OMIM.58613861\"> </a></td><td>RETINITIS PIGMENTOSA 59; RP59</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613862<a name=\"omim-OMIM.58613862\"> </a></td><td>RETINITIS PIGMENTOSA 38; RP38</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614034<a name=\"omim-OMIM.58614034\"> </a></td><td>HEME OXYGENASE 1 DEFICIENCY; HMOX1D</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614065<a name=\"omim-OMIM.58614065\"> </a></td><td>MYOPATHY, DISTAL, 4; MPD4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614173<a name=\"omim-OMIM.58614173\"> </a></td><td>JOUBERT SYNDROME 13; JBTS13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614180<a name=\"omim-OMIM.58614180\"> </a></td><td>RETINITIS PIGMENTOSA 61; RP61</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614181<a name=\"omim-OMIM.58614181\"> </a></td><td>RETINITIS PIGMENTOSA 62; RP62</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614199<a name=\"omim-OMIM.58614199\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 5, WITH OR WITHOUT OCULAR ABNORMALITIES; NPHS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614202<a name=\"omim-OMIM.58614202\"> </a></td><td>RAFIQ SYNDROME; RAFQS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614225<a name=\"omim-OMIM.58614225\"> </a></td><td>WARBURG MICRO SYNDROME 2; WARBM2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614254<a name=\"omim-OMIM.58614254\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH OR WITHOUT HYPERKINETIC MOVEMENTS AND SEIZURES, AUTOSOMAL DOMINANT; NDHMSD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614255<a name=\"omim-OMIM.58614255\"> </a></td><td>NESCAV SYNDROME; NESCAVS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614299<a name=\"omim-OMIM.58614299\"> </a></td><td>MULTIPLE MITOCHONDRIAL DYSFUNCTIONS SYNDROME 2 WITH HYPERGLYCINEMIA; MMDS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614381<a name=\"omim-OMIM.58614381\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 8, WITH OR WITHOUT OLIGODONTIA AND/OR HYPOGONADOTROPIC HYPOGONADISM; HLD8</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614424<a name=\"omim-OMIM.58614424\"> </a></td><td>JOUBERT SYNDROME 14; JBTS14</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614500<a name=\"omim-OMIM.58614500\"> </a></td><td>CONE-ROD DYSTROPHY 16; CORD16</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614557<a name=\"omim-OMIM.58614557\"> </a></td><td>EHLERS-DANLOS SYNDROME, KYPHOSCOLIOTIC TYPE, 2; EDSKSCL2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614607<a name=\"omim-OMIM.58614607\"> </a></td><td>COFFIN-SIRIS SYNDROME 2; CSS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614615<a name=\"omim-OMIM.58614615\"> </a></td><td>JOUBERT SYNDROME 17; JBTS17</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614669<a name=\"omim-OMIM.58614669\"> </a></td><td>AURICULOCONDYLAR SYNDROME 2; ARCND2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614678<a name=\"omim-OMIM.58614678\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 1B; PCH1B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614744<a name=\"omim-OMIM.58614744\"> </a></td><td>FACIAL PARESIS, HEREDITARY CONGENITAL, 3; HCFP3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614753<a name=\"omim-OMIM.58614753\"> </a></td><td>SOTOS SYNDROME 2; SOTOS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614831<a name=\"omim-OMIM.58614831\"> </a></td><td>SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 13; SCAR13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614833<a name=\"omim-OMIM.58614833\"> </a></td><td>MICROCEPHALY, SHORT STATURE, AND POLYMICROGYRIA WITH OR WITHOUT SEIZURES; MSSP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614876<a name=\"omim-OMIM.58614876\"> </a></td><td>PEROXISOME BIOGENESIS DISORDER 8A (ZELLWEGER); PBD8A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614877<a name=\"omim-OMIM.58614877\"> </a></td><td>PEROXISOME BIOGENESIS DISORDER 8B; PBD8B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614932<a name=\"omim-OMIM.58614932\"> </a></td><td>COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 13; COXPD13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614945<a name=\"omim-OMIM.58614945\"> </a></td><td>DEAFNESS, AUTOSOMAL RECESSIVE 18B; DFNB18B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615030<a name=\"omim-OMIM.58615030\"> </a></td><td>SPASTIC PARAPLEGIA 56, AUTOSOMAL RECESSIVE; SPG56</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615031<a name=\"omim-OMIM.58615031\"> </a></td><td>SPASTIC PARAPLEGIA 49, AUTOSOMAL RECESSIVE; SPG49</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615065<a name=\"omim-OMIM.58615065\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, TYPE 5D; DA5D</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615071<a name=\"omim-OMIM.58615071\"> </a></td><td>ALAZAMI SYNDROME; ALAZS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615095<a name=\"omim-OMIM.58615095\"> </a></td><td>MICROCEPHALY 10, PRIMARY, AUTOSOMAL RECESSIVE; MCPH10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615181<a name=\"omim-OMIM.58615181\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH BRAIN AND EYE ANOMALIES), TYPE A, 11; MDDGA11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615190<a name=\"omim-OMIM.58615190\"> </a></td><td>DYSKERATOSIS CONGENITA, AUTOSOMAL RECESSIVE 5; DKCB5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615191<a name=\"omim-OMIM.58615191\"> </a></td><td>LISSENCEPHALY 5; LIS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615268<a name=\"omim-OMIM.58615268\"> </a></td><td>CEREBELLAR ATAXIA, MENTAL RETARDATION, AND DYSEQUILIBRIUM SYNDROME 4; CAMRQ4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615286<a name=\"omim-OMIM.58615286\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL RECESSIVE 36; MRT36</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615352<a name=\"omim-OMIM.58615352\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 14; MDDGC14</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615411<a name=\"omim-OMIM.58615411\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 3; CDCBM3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615412<a name=\"omim-OMIM.58615412\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 4; CDCBM4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615419<a name=\"omim-OMIM.58615419\"> </a></td><td>HYPOTONIA, INFANTILE, WITH PSYCHOMOTOR RETARDATION AND CHARACTERISTIC FACIES 1; IHPRF1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615471<a name=\"omim-OMIM.58615471\"> </a></td><td>MITOCHONDRIAL DNA DEPLETION SYNDROME 13 (ENCEPHALOMYOPATHIC TYPE); MTDPS13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615476<a name=\"omim-OMIM.58615476\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 18; DEE18</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615485<a name=\"omim-OMIM.58615485\"> </a></td><td>BAINBRIDGE-ROPERS SYNDROME; BRPS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615502<a name=\"omim-OMIM.58615502\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 21; MRD21</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615546<a name=\"omim-OMIM.58615546\"> </a></td><td>VAN MALDERGEM SYNDROME 2; VMLDS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615574<a name=\"omim-OMIM.58615574\"> </a></td><td>ASPARAGINE SYNTHETASE DEFICIENCY; ASNSD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615681<a name=\"omim-OMIM.58615681\"> </a></td><td>SPASTIC PARAPLEGIA 62, AUTOSOMAL RECESSIVE; SPG62</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615715<a name=\"omim-OMIM.58615715\"> </a></td><td>BONE MARROW FAILURE SYNDROME 2; BMFS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615716<a name=\"omim-OMIM.58615716\"> </a></td><td>HYPERPHOSPHATASIA WITH MENTAL RETARDATION SYNDROME 4; HPMRS4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615760<a name=\"omim-OMIM.58615760\"> </a></td><td>MICROCEPHALY, PROGRESSIVE, WITH SEIZURES AND CEREBRAL AND CEREBELLAR ATROPHY; MSCCA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615763<a name=\"omim-OMIM.58615763\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 5; CDCBM5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615809<a name=\"omim-OMIM.58615809\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 9; PCH9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615829<a name=\"omim-OMIM.58615829\"> </a></td><td>XIA-GIBBS SYNDROME; XIGIS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615834<a name=\"omim-OMIM.58615834\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 26; MRD26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615846<a name=\"omim-OMIM.58615846\"> </a></td><td>AICARDI-GOUTIERES SYNDROME 7; AGS7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615866<a name=\"omim-OMIM.58615866\"> </a></td><td>COFFIN-SIRIS SYNDROME 9; CSS9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615909<a name=\"omim-OMIM.58615909\"> </a></td><td>DIAMOND-BLACKFAN ANEMIA 13; DBA13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615948<a name=\"omim-OMIM.58615948\"> </a></td><td>OROFACIODIGITAL SYNDROME XIV; OFD14</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615959<a name=\"omim-OMIM.58615959\"> </a></td><td>MYOPATHY, CENTRONUCLEAR, 5; CNM5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615960<a name=\"omim-OMIM.58615960\"> </a></td><td>PORETTI-BOLTSHAUSER SYNDROME; PTBHS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615973<a name=\"omim-OMIM.58615973\"> </a></td><td>CONE-ROD DYSTROPHY 20; CORD20</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615981<a name=\"omim-OMIM.58615981\"> </a></td><td>BARDET-BIEDL SYNDROME 2; BBS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615982<a name=\"omim-OMIM.58615982\"> </a></td><td>BARDET-BIEDL SYNDROME 4; BBS4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615983<a name=\"omim-OMIM.58615983\"> </a></td><td>BARDET-BIEDL SYNDROME 5; BBS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615993<a name=\"omim-OMIM.58615993\"> </a></td><td>BARDET-BIEDL SYNDROME 16; BBS16</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616051<a name=\"omim-OMIM.58616051\"> </a></td><td>MICROCEPHALY 13, PRIMARY, AUTOSOMAL RECESSIVE; MCPH13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616056<a name=\"omim-OMIM.58616056\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 26; DEE26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616081<a name=\"omim-OMIM.58616081\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 1C; PCH1C</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616094<a name=\"omim-OMIM.58616094\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 12; MDDGC12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616127<a name=\"omim-OMIM.58616127\"> </a></td><td>SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 17; SCAR17</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616140<a name=\"omim-OMIM.58616140\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 9; HLD9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616155<a name=\"omim-OMIM.58616155\"> </a></td><td>CHARCOT-MARIE-TOOTH DISEASE, AXONAL, TYPE 2S; CMT2S</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616171<a name=\"omim-OMIM.58616171\"> </a></td><td>MICROCEPHALY AND CHORIORETINOPATHY, AUTOSOMAL RECESSIVE, 2; MCCRP2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616199<a name=\"omim-OMIM.58616199\"> </a></td><td>POLYGLUCOSAN BODY MYOPATHY 2; PGBM2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616211<a name=\"omim-OMIM.58616211\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 28; DEE28</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616263<a name=\"omim-OMIM.58616263\"> </a></td><td>NEUROLOGIC, ENDOCRINE, AND PANCREATIC DISEASE, MULTISYSTEM, INFANTILE-ONSET; IMNEPD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616266<a name=\"omim-OMIM.58616266\"> </a></td><td>CONGENITAL CONTRACTURES OF THE LIMBS AND FACE, HYPOTONIA, AND DEVELOPMENTAL DELAY; CLIFAHDD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616271<a name=\"omim-OMIM.58616271\"> </a></td><td>3-METHYLGLUTACONIC ACIDURIA, TYPE VII; MGCA7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616277<a name=\"omim-OMIM.58616277\"> </a></td><td>MITOCHONDRIAL SHORT-CHAIN ENOYL-CoA HYDRATASE 1 DEFICIENCY; ECHS1D</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616281<a name=\"omim-OMIM.58616281\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH SPASTIC PARAPLEGIA AND MICROCEPHALY; NEDSPM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616321<a name=\"omim-OMIM.58616321\"> </a></td><td>MYASTHENIC SYNDROME, CONGENITAL, 3A, SLOW-CHANNEL; CMS3A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616354<a name=\"omim-OMIM.58616354\"> </a></td><td>SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 20; SCAR20</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616394<a name=\"omim-OMIM.58616394\"> </a></td><td>RETINITIS PIGMENTOSA 71; RP71</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616420<a name=\"omim-OMIM.58616420\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 10; HLD10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616421<a name=\"omim-OMIM.58616421\"> </a></td><td>MYOCLONIC-ATONIC EPILEPSY; MAE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616471<a name=\"omim-OMIM.58616471\"> </a></td><td>BETHLEM MYOPATHY 2; BTHLM2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616490<a name=\"omim-OMIM.58616490\"> </a></td><td>JOUBERT SYNDROME 23; JBTS23</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616531<a name=\"omim-OMIM.58616531\"> </a></td><td>POLYMICROGYRIA, PERISYLVIAN, WITH CEREBELLAR HYPOPLASIA AND ARTHROGRYPOSIS; PMGYCHA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616544<a name=\"omim-OMIM.58616544\"> </a></td><td>RETINITIS PIGMENTOSA 73; RP73</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616562<a name=\"omim-OMIM.58616562\"> </a></td><td>RETINITIS PIGMENTOSA 74; RP74</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616564<a name=\"omim-OMIM.58616564\"> </a></td><td>NOONAN SYNDROME 10; NS10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616632<a name=\"omim-OMIM.58616632\"> </a></td><td>SEIZURES, CORTICAL BLINDNESS, AND MICROCEPHALY SYNDROME; SCBMS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616647<a name=\"omim-OMIM.58616647\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 35; DEE35</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616649<a name=\"omim-OMIM.58616649\"> </a></td><td>SPHEROCYTOSIS, TYPE 2; SPH2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616651<a name=\"omim-OMIM.58616651\"> </a></td><td>ROIFMAN SYNDROME; RFMN</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616654<a name=\"omim-OMIM.58616654\"> </a></td><td>JOUBERT SYNDROME 24; JBTS24</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616657<a name=\"omim-OMIM.58616657\"> </a></td><td>SPASTIC TETRAPLEGIA, THIN CORPUS CALLOSUM, AND PROGRESSIVE MICROCEPHALY; SPATCCM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616668<a name=\"omim-OMIM.58616668\"> </a></td><td>CHARCOT-MARIE-TOOTH DISEASE, AXONAL, TYPE 2X; CMT2X</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616683<a name=\"omim-OMIM.58616683\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 12; HLD12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616721<a name=\"omim-OMIM.58616721\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIn; CDG2N</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616732<a name=\"omim-OMIM.58616732\"> </a></td><td>OPTIC ATROPHY 10 WITH OR WITHOUT ATAXIA, MENTAL RETARDATION, AND SEIZURES; OPA10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616738<a name=\"omim-OMIM.58616738\"> </a></td><td>RADIOULNAR SYNOSTOSIS WITH AMEGAKARYOCYTIC THROMBOCYTOPENIA 2; RUSAT2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616740<a name=\"omim-OMIM.58616740\"> </a></td><td>IMMUNODEFICIENCY 46; IMD46</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616789<a name=\"omim-OMIM.58616789\"> </a></td><td>MENTAL RETARDATION AND DISTINCTIVE FACIAL FEATURES WITH OR WITHOUT CARDIAC DEFECTS; MRFACD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616801<a name=\"omim-OMIM.58616801\"> </a></td><td>HYPOTONIA, INFANTILE, WITH PSYCHOMOTOR RETARDATION AND CHARACTERISTIC FACIES 2; IHPRF2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616875<a name=\"omim-OMIM.58616875\"> </a></td><td>CEREBELLAR ATROPHY, VISUAL IMPAIRMENT, AND PSYCHOMOTOR RETARDATION; CAVIPMR</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616892<a name=\"omim-OMIM.58616892\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 12; NPHS12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616900<a name=\"omim-OMIM.58616900\"> </a></td><td>HYPOTONIA, INFANTILE, WITH PSYCHOMOTOR RETARDATION AND CHARACTERISTIC FACIES 3; IHPRF3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616973<a name=\"omim-OMIM.58616973\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 42; MRD42</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617011<a name=\"omim-OMIM.58617011\"> </a></td><td>MACROCEPHALY, DYSMORPHIC FACIES, AND PSYCHOMOTOR RETARDATION; MDFPMR</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617013<a name=\"omim-OMIM.58617013\"> </a></td><td>HYPERMANGANESEMIA WITH DYSTONIA 2; HMNDYT2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617047<a name=\"omim-OMIM.58617047\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 26; CMH26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617052<a name=\"omim-OMIM.58617052\"> </a></td><td>BONE MARROW FAILURE SYNDROME 3; BMFS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617053<a name=\"omim-OMIM.58617053\"> </a></td><td>MIRAGE SYNDROME; MIRAGE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617093<a name=\"omim-OMIM.58617093\"> </a></td><td>GROWTH RETARDATION, IMPAIRED INTELLECTUAL DEVELOPMENT, HYPOTONIA, AND HEPATOPATHY; GRIDHH</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617106<a name=\"omim-OMIM.58617106\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 42; DEE42</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617120<a name=\"omim-OMIM.58617120\"> </a></td><td>JOUBERT SYNDROME 27; JBTS27</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617121<a name=\"omim-OMIM.58617121\"> </a></td><td>JOUBERT SYNDROME 28; JBTS28</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617123<a name=\"omim-OMIM.58617123\"> </a></td><td>RETINITIS PIGMENTOSA 76; RP76</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617137<a name=\"omim-OMIM.58617137\"> </a></td><td>FRONTOMETAPHYSEAL DYSPLASIA 2; FMD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617146<a name=\"omim-OMIM.58617146\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, WITH IMPAIRED PROPRIOCEPTION AND TOUCH; DAIPT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617183<a name=\"omim-OMIM.58617183\"> </a></td><td>HAREL-YOON SYNDROME; HAYOS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617193<a name=\"omim-OMIM.58617193\"> </a></td><td>ENCEPHALOPATHY, PROGRESSIVE, EARLY-ONSET, WITH BRAIN ATROPHY AND THIN CORPUS CALLOSUM; PEBAT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617222<a name=\"omim-OMIM.58617222\"> </a></td><td>SUDDEN CARDIAC FAILURE, INFANTILE; SCFI</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617276<a name=\"omim-OMIM.58617276\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 48; DEE48</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617330<a name=\"omim-OMIM.58617330\"> </a></td><td>HYPOTONIA, ATAXIA, AND DELAYED DEVELOPMENT SYNDROME; HADDS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617350<a name=\"omim-OMIM.58617350\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 52; DEE52</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617397<a name=\"omim-OMIM.58617397\"> </a></td><td>PSEUDO-TORCH SYNDROME 2; PTORCH2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617433<a name=\"omim-OMIM.58617433\"> </a></td><td>RETINITIS PIGMENTOSA 78; RP78</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617443<a name=\"omim-OMIM.58617443\"> </a></td><td>BLEEDING DISORDER, PLATELET-TYPE, 21; BDPLT21</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617460<a name=\"omim-OMIM.58617460\"> </a></td><td>RETINITIS PIGMENTOSA 79; RP79</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617481<a name=\"omim-OMIM.58617481\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, HYPOTONIA, AND VARIABLE BRAIN ANOMALIES; NMIHBA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617537<a name=\"omim-OMIM.58617537\"> </a></td><td>RAHMAN SYNDROME; RMNS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617547<a name=\"omim-OMIM.58617547\"> </a></td><td>RETINAL DYSTROPHY WITH OR WITHOUT MACULAR STAPHYLOMA; RDMS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617622<a name=\"omim-OMIM.58617622\"> </a></td><td>JOUBERT SYNDROME 30; JBTS30</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617675<a name=\"omim-OMIM.58617675\"> </a></td><td>MYOPATHY, MITOCHONDRIAL, AND ATAXIA; MMYAT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617681<a name=\"omim-OMIM.58617681\"> </a></td><td>BLEPHAROCHEILODONTIC SYNDROME 2; BCDS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617694<a name=\"omim-OMIM.58617694\"> </a></td><td>AL KAISSI SYNDROME; ALKAS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617781<a name=\"omim-OMIM.58617781\"> </a></td><td>RETINITIS PIGMENTOSA 80; RP80</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617805<a name=\"omim-OMIM.58617805\"> </a></td><td>RENAL HYPODYSPLASIA/APLASIA 3; RHDA3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617807<a name=\"omim-OMIM.58617807\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH ATAXIC GAIT, ABSENT SPEECH, AND DECREASED CORTICAL WHITE MATTER; NDAGSCW</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617829<a name=\"omim-OMIM.58617829\"> </a></td><td>EPILEPTIC ENCEPHALOPATHY, INFANTILE OR EARLY CHILDHOOD, 2; IECEE2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617873<a name=\"omim-OMIM.58617873\"> </a></td><td>COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 35; COXPD35</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617948<a name=\"omim-OMIM.58617948\"> </a></td><td>ELLIPTOCYTOSIS 3; EL3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617954<a name=\"omim-OMIM.58617954\"> </a></td><td>MULTIPLE MITOCHONDRIAL DYSFUNCTIONS SYNDROME 6; MMDS6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618056<a name=\"omim-OMIM.58618056\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH CEREBELLAR ATROPHY AND WITH OR WITHOUT SEIZURES; NEDCAS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618088<a name=\"omim-OMIM.58618088\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH REGRESSION, ABNORMAL MOVEMENTS, LOSS OF SPEECH, AND SEIZURES; NEDAMSS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618129<a name=\"omim-OMIM.58618129\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL DOMINANT 4; LGMDD4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618138<a name=\"omim-OMIM.58618138\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 23; LGMDR23</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618174<a name=\"omim-OMIM.58618174\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 9; CDCBM9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618225<a name=\"omim-OMIM.58618225\"> </a></td><td>MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 4; MC1DN4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618273<a name=\"omim-OMIM.58618273\"> </a></td><td>MEGA-CORPUS-CALLOSUM SYNDROME WITH CEREBELLAR HYPOPLASIA AND CORTICAL MALFORMATIONS; MCCCHCM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618316<a name=\"omim-OMIM.58618316\"> </a></td><td>INTELLECTUAL DEVELOPMENTAL DISORDER WITH CARDIAC DEFECTS AND DYSMORPHIC FACIES; IDDCDF</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618325<a name=\"omim-OMIM.58618325\"> </a></td><td>LISSENCEPHALY 9 WITH COMPLEX BRAINSTEM MALFORMATION; LIS9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618404<a name=\"omim-OMIM.58618404\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 18; HLD18</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618512<a name=\"omim-OMIM.58618512\"> </a></td><td>O\\'DONNELL-LURIA-RODAN SYNDROME; ODLURO</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614921<a name=\"omim-OMIM.58614921\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE It; CDG1T</td></tr></table></div>" - ]; - fhir:CodeSystem.url [ fhir:value "https://omim.org/"]; - fhir:CodeSystem.version [ fhir:value "0.2.0"]; - fhir:CodeSystem.name [ fhir:value "OMIM"]; - fhir:CodeSystem.title [ fhir:value "Online Mendelian Inheritance in Man"]; - fhir:CodeSystem.status [ fhir:value "draft"]; - fhir:CodeSystem.experimental [ fhir:value "false"^^xsd:boolean]; - fhir:CodeSystem.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:CodeSystem.url [ fhir:value "https://omim.org/"]; # + fhir:CodeSystem.version [ fhir:value "0.2.0"]; # + fhir:CodeSystem.name [ fhir:value "OMIM"]; # + fhir:CodeSystem.title [ fhir:value "Online Mendelian Inheritance in Man"]; # + fhir:CodeSystem.status [ fhir:value "draft"]; # + fhir:CodeSystem.experimental [ fhir:value "false"^^xsd:boolean]; # + fhir:CodeSystem.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:CodeSystem.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -37,11 +37,11 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:CodeSystem.description [ fhir:value "An online database that describes the function and phenotypes associated with human genes"]; - fhir:CodeSystem.caseSensitive [ fhir:value "true"^^xsd:boolean]; - fhir:CodeSystem.content [ fhir:value "fragment"]; - fhir:CodeSystem.count [ fhir:value "497"^^xsd:nonNegativeInteger]; + ]; # + fhir:CodeSystem.description [ fhir:value "An online database that describes the function and phenotypes associated with human genes"]; # + fhir:CodeSystem.caseSensitive [ fhir:value "true"^^xsd:boolean]; # + fhir:CodeSystem.content [ fhir:value "fragment"]; # + fhir:CodeSystem.count [ fhir:value "497"^^xsd:nonNegativeInteger]; # fhir:CodeSystem.concept [ fhir:index 0; fhir:CodeSystem.concept.code [ fhir:value "OMIM:613801" ]; @@ -2034,7 +2034,7 @@ fhir:index 497; fhir:CodeSystem.concept.code [ fhir:value "OMIM:614921" ]; fhir:CodeSystem.concept.display [ fhir:value "CONGENITAL DISORDER OF GLYCOSYLATION, TYPE It; CDG1T" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/CodeSystem-omim.ttl.html b/CodeSystem-omim.ttl.html index d5cdca52..132a2129 100644 --- a/CodeSystem-omim.ttl.html +++ b/CodeSystem-omim.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Online Mendelian Inheritance in Man - TTL Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,19 +294,19 @@ <h2 id="root">: Online Mendelian Inheritance in Man - TTL Representation</h2> a fhir:CodeSystem; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "omim"]; + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "omim"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://omim.org/</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">OMIM:613801<a name=\"omim-OMIM.58613801\"> </a></td><td>Retinitis pigmentosa-40</td></tr><tr><td style=\"white-space:nowrap\">OMIM:213300<a name=\"omim-OMIM.58213300\"> </a></td><td>Joubert syndrome 1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615780<a name=\"omim-OMIM.58615780\"> </a></td><td>Retinitis pigmentosa 69</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613826<a name=\"omim-OMIM.58613826\"> </a></td><td>Leber congenital amaurosis 6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:310200<a name=\"omim-OMIM.58310200\"> </a></td><td>Duchenne muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617194<a name=\"omim-OMIM.58617194\"> </a></td><td>Lethal congenital contracture syndrome 11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:105400<a name=\"omim-OMIM.58105400\"> </a></td><td>AMYOTROPHIC LATERAL SCLEROSIS 1; ALS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:108120<a name=\"omim-OMIM.58108120\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, TYPE 1A; DA1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:114300<a name=\"omim-OMIM.58114300\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, TYPE 3; DA3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:115195<a name=\"omim-OMIM.58115195\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 2; CMH2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:115196<a name=\"omim-OMIM.58115196\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 3; CMH3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:115197<a name=\"omim-OMIM.58115197\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 4; CMH4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:115200<a name=\"omim-OMIM.58115200\"> </a></td><td>CARDIOMYOPATHY, DILATED, 1A; CMD1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:117000<a name=\"omim-OMIM.58117000\"> </a></td><td>CENTRAL CORE DISEASE OF MUSCLE; CCD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:117360<a name=\"omim-OMIM.58117360\"> </a></td><td>SPINOCEREBELLAR ATAXIA 29; SCA29</td></tr><tr><td style=\"white-space:nowrap\">OMIM:119530<a name=\"omim-OMIM.58119530\"> </a></td><td>OROFACIAL CLEFT 1; OFC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:122470<a name=\"omim-OMIM.58122470\"> </a></td><td>CORNELIA DE LANGE SYNDROME 1; CDLS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:130600<a name=\"omim-OMIM.58130600\"> </a></td><td>ELLIPTOCYTOSIS 2; EL2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:135900<a name=\"omim-OMIM.58135900\"> </a></td><td>COFFIN-SIRIS SYNDROME 1; CSS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:136140<a name=\"omim-OMIM.58136140\"> </a></td><td>FLOATING-HARBOR SYNDROME; FLHS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:137920<a name=\"omim-OMIM.58137920\"> </a></td><td>RENAL CYSTS AND DIABETES SYNDROME; RCAD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:139090<a name=\"omim-OMIM.58139090\"> </a></td><td>GRAY PLATELET SYNDROME; GPS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:139210<a name=\"omim-OMIM.58139210\"> </a></td><td>MYHRE SYNDROME; MYHRS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:143095<a name=\"omim-OMIM.58143095\"> </a></td><td>SPONDYLOEPIPHYSEAL DYSPLASIA WITH CONGENITAL JOINT DISLOCATIONS; SEDCJD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:143465<a name=\"omim-OMIM.58143465\"> </a></td><td>ATTENTION DEFICIT-HYPERACTIVITY DISORDER; ADHD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:147891<a name=\"omim-OMIM.58147891\"> </a></td><td>ISCHIOCOXOPODOPATELLAR SYNDROME WITH OR WITHOUT PULMONARY ARTERIAL HYPERTENSION; ICPPS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:147920<a name=\"omim-OMIM.58147920\"> </a></td><td>KABUKI SYNDROME 1; KABUK1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:148050<a name=\"omim-OMIM.58148050\"> </a></td><td>KBG SYNDROME; KBGS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:149400<a name=\"omim-OMIM.58149400\"> </a></td><td>HYPEREKPLEXIA 1; HKPX1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:152950<a name=\"omim-OMIM.58152950\"> </a></td><td>MICROCEPHALY WITH OR WITHOUT CHORIORETINOPATHY, LYMPHEDEMA, OR MENTAL RETARDATION; MCLMR</td></tr><tr><td style=\"white-space:nowrap\">OMIM:153670<a name=\"omim-OMIM.58153670\"> </a></td><td>BERNARD-SOULIER SYNDROME, TYPE A2, AUTOSOMAL DOMINANT; BSSA2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:154400<a name=\"omim-OMIM.58154400\"> </a></td><td>ACROFACIAL DYSOSTOSIS 1, NAGER TYPE; AFD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:154700<a name=\"omim-OMIM.58154700\"> </a></td><td>MARFAN SYNDROME; MFS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:155310<a name=\"omim-OMIM.58155310\"> </a></td><td>VISCERAL MYOPATHY; VSCM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:158590<a name=\"omim-OMIM.58158590\"> </a></td><td>NEURONOPATHY, DISTAL HEREDITARY MOTOR, TYPE IIA; HMN2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:158810<a name=\"omim-OMIM.58158810\"> </a></td><td>BETHLEM MYOPATHY 1; BTHLM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:159550<a name=\"omim-OMIM.58159550\"> </a></td><td>ATAXIA-PANCYTOPENIA SYNDROME; ATXPC</td></tr><tr><td style=\"white-space:nowrap\">OMIM:160150<a name=\"omim-OMIM.58160150\"> </a></td><td>MYOPATHY, CENTRONUCLEAR, 1; CNM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:160500<a name=\"omim-OMIM.58160500\"> </a></td><td>MYOPATHY, DISTAL, 1; MPD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:160800<a name=\"omim-OMIM.58160800\"> </a></td><td>MYOTONIA CONGENITA, AUTOSOMAL DOMINANT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:160900<a name=\"omim-OMIM.58160900\"> </a></td><td>MYOTONIC DYSTROPHY 1; DM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:161800<a name=\"omim-OMIM.58161800\"> </a></td><td>NEMALINE MYOPATHY 3; NEM3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:163950<a name=\"omim-OMIM.58163950\"> </a></td><td>NOONAN SYNDROME 1; NS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:178110<a name=\"omim-OMIM.58178110\"> </a></td><td>CONTRACTURES, PTERYGIA, AND SPONDYLOCARPOTARSAL FUSION SYNDROME 1A; CPSFS1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:178500<a name=\"omim-OMIM.58178500\"> </a></td><td>PULMONARY FIBROSIS, IDIOPATHIC; IPF</td></tr><tr><td style=\"white-space:nowrap\">OMIM:180100<a name=\"omim-OMIM.58180100\"> </a></td><td>RETINITIS PIGMENTOSA 1; RP1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:180849<a name=\"omim-OMIM.58180849\"> </a></td><td>RUBINSTEIN-TAYBI SYNDROME 1; RSTS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:181430<a name=\"omim-OMIM.58181430\"> </a></td><td>SCAPULOPERONEAL MYOPATHY, MYH7-RELATED; SPMM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:182601<a name=\"omim-OMIM.58182601\"> </a></td><td>SPASTIC PARAPLEGIA 4, AUTOSOMAL DOMINANT; SPG4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:188000<a name=\"omim-OMIM.58188000\"> </a></td><td>THROMBOCYTOPENIA 2; THC2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:191480<a name=\"omim-OMIM.58191480\"> </a></td><td>UNCOMBABLE HAIR SYNDROME 1; UHS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:203800<a name=\"omim-OMIM.58203800\"> </a></td><td>ALSTROM SYNDROME; ALMS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:204200<a name=\"omim-OMIM.58204200\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 3; CLN3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:204500<a name=\"omim-OMIM.58204500\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 2; CLN2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:205100<a name=\"omim-OMIM.58205100\"> </a></td><td>AMYOTROPHIC LATERAL SCLEROSIS 2, JUVENILE; ALS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:206900<a name=\"omim-OMIM.58206900\"> </a></td><td>MICROPHTHALMIA, SYNDROMIC 3; MCOPS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:208900<a name=\"omim-OMIM.58208900\"> </a></td><td>ATAXIA-TELANGIECTASIA; AT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:209850<a name=\"omim-OMIM.58209850\"> </a></td><td>AUTISM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:209900<a name=\"omim-OMIM.58209900\"> </a></td><td>BARDET-BIEDL SYNDROME 1; BBS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:210000<a name=\"omim-OMIM.58210000\"> </a></td><td>BEHR SYNDROME; BEHRS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:210720<a name=\"omim-OMIM.58210720\"> </a></td><td>MICROCEPHALIC OSTEODYSPLASTIC PRIMORDIAL DWARFISM, TYPE II; MOPD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:210900<a name=\"omim-OMIM.58210900\"> </a></td><td>BLOOM SYNDROME; BLM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:212065<a name=\"omim-OMIM.58212065\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ia; CDG1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:212066<a name=\"omim-OMIM.58212066\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIa; CDG2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:214500<a name=\"omim-OMIM.58214500\"> </a></td><td>CHEDIAK-HIGASHI SYNDROME; CHS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:214800<a name=\"omim-OMIM.58214800\"> </a></td><td>CHARGE SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:215500<a name=\"omim-OMIM.58215500\"> </a></td><td>CHOROIDAL DYSTROPHY, CENTRAL AREOLAR, 1; CACD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:216400<a name=\"omim-OMIM.58216400\"> </a></td><td>COCKAYNE SYNDROME A; CSA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:216550<a name=\"omim-OMIM.58216550\"> </a></td><td>COHEN SYNDROME; COH1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:217080<a name=\"omim-OMIM.58217080\"> </a></td><td>JALILI SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:217980<a name=\"omim-OMIM.58217980\"> </a></td><td>CORPUS CALLOSUM, AGENESIS OF, WITH FACIAL ANOMALIES AND ROBIN SEQUENCE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:218340<a name=\"omim-OMIM.58218340\"> </a></td><td>TEMTAMY SYNDROME; TEMTYS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:219200<a name=\"omim-OMIM.58219200\"> </a></td><td>CUTIS LAXA, AUTOSOMAL RECESSIVE, TYPE IIA; ARCL2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:224050<a name=\"omim-OMIM.58224050\"> </a></td><td>CEREBELLAR ATAXIA, MENTAL RETARDATION, AND DYSEQUILIBRIUM SYNDROME 1; CAMRQ1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:224690<a name=\"omim-OMIM.58224690\"> </a></td><td>MEIER-GORLIN SYNDROME 1; MGORS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:225753<a name=\"omim-OMIM.58225753\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 4; PCH4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:225790<a name=\"omim-OMIM.58225790\"> </a></td><td>PROLIFERATIVE VASCULOPATHY AND HYDRANENCEPHALY-HYDROCEPHALY SYNDROME; PVHH</td></tr><tr><td style=\"white-space:nowrap\">OMIM:227650<a name=\"omim-OMIM.58227650\"> </a></td><td>FANCONI ANEMIA, COMPLEMENTATION GROUP A; FANCA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:229600<a name=\"omim-OMIM.58229600\"> </a></td><td>FRUCTOSE INTOLERANCE, HEREDITARY; HFI</td></tr><tr><td style=\"white-space:nowrap\">OMIM:230000<a name=\"omim-OMIM.58230000\"> </a></td><td>FUCOSIDOSIS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:230500<a name=\"omim-OMIM.58230500\"> </a></td><td>GM1-GANGLIOSIDOSIS, TYPE I</td></tr><tr><td style=\"white-space:nowrap\">OMIM:232300<a name=\"omim-OMIM.58232300\"> </a></td><td>GLYCOGEN STORAGE DISEASE II; GSD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:232600<a name=\"omim-OMIM.58232600\"> </a></td><td>GLYCOGEN STORAGE DISEASE V; GSD5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:234200<a name=\"omim-OMIM.58234200\"> </a></td><td>NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 1; NBIA1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:234500<a name=\"omim-OMIM.58234500\"> </a></td><td>HARTNUP DISORDER; HND</td></tr><tr><td style=\"white-space:nowrap\">OMIM:236000<a name=\"omim-OMIM.58236000\"> </a></td><td>LYMPHOMA, HODGKIN, CLASSIC; CHL</td></tr><tr><td style=\"white-space:nowrap\">OMIM:236600<a name=\"omim-OMIM.58236600\"> </a></td><td>HYDROCEPHALUS, CONGENITAL, 1; HYC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:236792<a name=\"omim-OMIM.58236792\"> </a></td><td>L-2-HYDROXYGLUTARIC ACIDURIA; L2HGA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:243310<a name=\"omim-OMIM.58243310\"> </a></td><td>BARAITSER-WINTER SYNDROME 1; BRWS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:244450<a name=\"omim-OMIM.58244450\"> </a></td><td>KAUFMAN OCULOCEREBROFACIAL SYNDROME; KOS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:245200<a name=\"omim-OMIM.58245200\"> </a></td><td>KRABBE DISEASE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:245359<a name=\"omim-OMIM.58245359\"> </a></td><td>missing</td></tr><tr><td style=\"white-space:nowrap\">OMIM:248200<a name=\"omim-OMIM.58248200\"> </a></td><td>STARGARDT DISEASE 1; STGD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:248700<a name=\"omim-OMIM.58248700\"> </a></td><td>MARDEN-WALKER SYNDROME; MWKS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:249000<a name=\"omim-OMIM.58249000\"> </a></td><td>MECKEL SYNDROME, TYPE 1; MKS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:249900<a name=\"omim-OMIM.58249900\"> </a></td><td>METACHROMATIC LEUKODYSTROPHY DUE TO SAPOSIN B DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:250100<a name=\"omim-OMIM.58250100\"> </a></td><td>METACHROMATIC LEUKODYSTROPHY; MLD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:250620<a name=\"omim-OMIM.58250620\"> </a></td><td>3-HYDROXYISOBUTYRYL-CoA HYDROLASE DEFICIENCY; HIBCHD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251200<a name=\"omim-OMIM.58251200\"> </a></td><td>MICROCEPHALY 1, PRIMARY, AUTOSOMAL RECESSIVE; MCPH1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251260<a name=\"omim-OMIM.58251260\"> </a></td><td>NIJMEGEN BREAKAGE SYNDROME; NBS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251280<a name=\"omim-OMIM.58251280\"> </a></td><td>DIENCEPHALIC-MESENCEPHALIC JUNCTION DYSPLASIA SYNDROME 1; DMJDS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251290<a name=\"omim-OMIM.58251290\"> </a></td><td>PSEUDO-TORCH SYNDROME 1; PTORCH1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:251300<a name=\"omim-OMIM.58251300\"> </a></td><td>GALLOWAY-MOWAT SYNDROME 1; GAMOS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:252010<a name=\"omim-OMIM.58252010\"> </a></td><td>MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 1; MC1DN1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:252160<a name=\"omim-OMIM.58252160\"> </a></td><td>MOLYBDENUM COFACTOR DEFICIENCY, COMPLEMENTATION GROUP B; MOCODB</td></tr><tr><td style=\"white-space:nowrap\">OMIM:252920<a name=\"omim-OMIM.58252920\"> </a></td><td>MUCOPOLYSACCHARIDOSIS, TYPE IIIB; MPS3B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:253250<a name=\"omim-OMIM.58253250\"> </a></td><td>MULIBREY NANISM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:253600<a name=\"omim-OMIM.58253600\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 1; LGMDR1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:253601<a name=\"omim-OMIM.58253601\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 2; LGMDR2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:253700<a name=\"omim-OMIM.58253700\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 5; LGMDR5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254090<a name=\"omim-OMIM.58254090\"> </a></td><td>ULLRICH CONGENITAL MUSCULAR DYSTROPHY 1; UCMD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254110<a name=\"omim-OMIM.58254110\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 8; LGMDR8</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254300<a name=\"omim-OMIM.58254300\"> </a></td><td>MYASTHENIC SYNDROME, CONGENITAL, 10; CMS10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254780<a name=\"omim-OMIM.58254780\"> </a></td><td>MYOCLONIC EPILEPSY OF LAFORA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:254940<a name=\"omim-OMIM.58254940\"> </a></td><td>CAREY-FINEMAN-ZITER SYNDROME; CFZS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:255310<a name=\"omim-OMIM.58255310\"> </a></td><td>MYOPATHY, CONGENITAL, WITH FIBER-TYPE DISPROPORTION; CFTD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:255320<a name=\"omim-OMIM.58255320\"> </a></td><td>MINICORE MYOPATHY WITH EXTERNAL OPHTHALMOPLEGIA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:255800<a name=\"omim-OMIM.58255800\"> </a></td><td>SCHWARTZ-JAMPEL SYNDROME, TYPE 1; SJS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256000<a name=\"omim-OMIM.58256000\"> </a></td><td>LEIGH SYNDROME; LS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256300<a name=\"omim-OMIM.58256300\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 1; NPHS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256600<a name=\"omim-OMIM.58256600\"> </a></td><td>NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 2A; NBIA2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256700<a name=\"omim-OMIM.58256700\"> </a></td><td>NEUROBLASTOMA, SUSCEPTIBILITY TO, 1; NBLST1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256730<a name=\"omim-OMIM.58256730\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 1; CLN1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256731<a name=\"omim-OMIM.58256731\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 5; CLN5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256800<a name=\"omim-OMIM.58256800\"> </a></td><td>INSENSITIVITY TO PAIN, CONGENITAL, WITH ANHIDROSIS; CIPA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:256850<a name=\"omim-OMIM.58256850\"> </a></td><td>GIANT AXONAL NEUROPATHY 1, AUTOSOMAL RECESSIVE; GAN1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:257220<a name=\"omim-OMIM.58257220\"> </a></td><td>NIEMANN-PICK DISEASE, TYPE C1; NPC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:257320<a name=\"omim-OMIM.58257320\"> </a></td><td>LISSENCEPHALY 2; LIS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:260400<a name=\"omim-OMIM.58260400\"> </a></td><td>SHWACHMAN-DIAMOND SYNDROME 1; SDS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:260565<a name=\"omim-OMIM.58260565\"> </a></td><td>PEHO SYNDROME; PEHO</td></tr><tr><td style=\"white-space:nowrap\">OMIM:261630<a name=\"omim-OMIM.58261630\"> </a></td><td>HYPERPHENYLALANINEMIA, BH4-DEFICIENT, C; HPABH4C</td></tr><tr><td style=\"white-space:nowrap\">OMIM:262500<a name=\"omim-OMIM.58262500\"> </a></td><td>LARON SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:263200<a name=\"omim-OMIM.58263200\"> </a></td><td>POLYCYSTIC KIDNEY DISEASE 4 WITH OR WITHOUT POLYCYSTIC LIVER DISEASE; PKD4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:265000<a name=\"omim-OMIM.58265000\"> </a></td><td>MULTIPLE PTERYGIUM SYNDROME, ESCOBAR VARIANT; EVMPS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:266100<a name=\"omim-OMIM.58266100\"> </a></td><td>EPILEPSY, PYRIDOXINE-DEPENDENT; EPD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:266265<a name=\"omim-OMIM.58266265\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIc; CDG2C</td></tr><tr><td style=\"white-space:nowrap\">OMIM:266500<a name=\"omim-OMIM.58266500\"> </a></td><td>REFSUM DISEASE, CLASSIC</td></tr><tr><td style=\"white-space:nowrap\">OMIM:266510<a name=\"omim-OMIM.58266510\"> </a></td><td>PEROXISOME BIOGENESIS DISORDER 3B; PBD3B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:268800<a name=\"omim-OMIM.58268800\"> </a></td><td>SANDHOFF DISEASE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:270200<a name=\"omim-OMIM.58270200\"> </a></td><td>SJOGREN-LARSSON SYNDROME; SLS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:270800<a name=\"omim-OMIM.58270800\"> </a></td><td>SPASTIC PARAPLEGIA 5A, AUTOSOMAL RECESSIVE; SPG5A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:271900<a name=\"omim-OMIM.58271900\"> </a></td><td>CANAVAN DISEASE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:272800<a name=\"omim-OMIM.58272800\"> </a></td><td>TAY-SACHS DISEASE; TSD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:273300<a name=\"omim-OMIM.58273300\"> </a></td><td>TESTICULAR GERM CELL TUMOR; TGCT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:274000<a name=\"omim-OMIM.58274000\"> </a></td><td>THROMBOCYTOPENIA-ABSENT RADIUS SYNDROME; TAR</td></tr><tr><td style=\"white-space:nowrap\">OMIM:276901<a name=\"omim-OMIM.58276901\"> </a></td><td>USHER SYNDROME, TYPE IIA; USH2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:277470<a name=\"omim-OMIM.58277470\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 2A; PCH2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300029<a name=\"omim-OMIM.58300029\"> </a></td><td>RETINITIS PIGMENTOSA 3; RP3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300067<a name=\"omim-OMIM.58300067\"> </a></td><td>LISSENCEPHALY, X-LINKED, 1; LISX1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300088<a name=\"omim-OMIM.58300088\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 9; DEE9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300100<a name=\"omim-OMIM.58300100\"> </a></td><td>ADRENOLEUKODYSTROPHY; ALD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300376<a name=\"omim-OMIM.58300376\"> </a></td><td>MUSCULAR DYSTROPHY, BECKER TYPE; BMD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300387<a name=\"omim-OMIM.58300387\"> </a></td><td>MENTAL RETARDATION, X-LINKED 63; MRX63</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300476<a name=\"omim-OMIM.58300476\"> </a></td><td>CONE-ROD DYSTROPHY, X-LINKED, 3; CORDX3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300486<a name=\"omim-OMIM.58300486\"> </a></td><td>MENTAL RETARDATION, X-LINKED, WITH CEREBELLAR HYPOPLASIA AND DISTINCTIVE FACIAL APPEARANCE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300495<a name=\"omim-OMIM.58300495\"> </a></td><td>AUTISM, SUSCEPTIBILITY TO, X-LINKED 2; AUTSX2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300523<a name=\"omim-OMIM.58300523\"> </a></td><td>ALLAN-HERNDON-DUDLEY SYNDROME; AHDS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300534<a name=\"omim-OMIM.58300534\"> </a></td><td>MENTAL RETARDATION, X-LINKED, SYNDROMIC, CLAES-JENSEN TYPE; MRXSCJ</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300695<a name=\"omim-OMIM.58300695\"> </a></td><td>SCAPULOPERONEAL MYOPATHY, X-LINKED DOMINANT; SPM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300749<a name=\"omim-OMIM.58300749\"> </a></td><td>MENTAL RETARDATION AND MICROCEPHALY WITH PONTINE AND CEREBELLAR HYPOPLASIA; MICPCH</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300804<a name=\"omim-OMIM.58300804\"> </a></td><td>JOUBERT SYNDROME 10; JBTS10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300881<a name=\"omim-OMIM.58300881\"> </a></td><td>MOVED TO 615777</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300882<a name=\"omim-OMIM.58300882\"> </a></td><td>CORNELIA DE LANGE SYNDROME 5; CDLS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300894<a name=\"omim-OMIM.58300894\"> </a></td><td>NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 5; NBIA5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300908<a name=\"omim-OMIM.58300908\"> </a></td><td>ANEMIA, NONSPHEROCYTIC HEMOLYTIC, DUE TO G6PD DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300957<a name=\"omim-OMIM.58300957\"> </a></td><td>MENTAL RETARDATION, X-LINKED 12; MRX12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300958<a name=\"omim-OMIM.58300958\"> </a></td><td>INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED, SYNDROMIC, SNIJDERS BLOK TYPE; MRXSSB</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300966<a name=\"omim-OMIM.58300966\"> </a></td><td>MENTAL RETARDATION, X-LINKED, SYNDROMIC 33; MRXS33</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300968<a name=\"omim-OMIM.58300968\"> </a></td><td>MENTAL RETARDATION, X-LINKED 99, SYNDROMIC, FEMALE-RESTRICTED; MRXS99F</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300983<a name=\"omim-OMIM.58300983\"> </a></td><td>MENTAL RETARDATION, X-LINKED 104; MRX104</td></tr><tr><td style=\"white-space:nowrap\">OMIM:300986<a name=\"omim-OMIM.58300986\"> </a></td><td>MENTAL RETARDATION, X-LINKED, SYNDROMIC, BAIN TYPE; MRXSB</td></tr><tr><td style=\"white-space:nowrap\">OMIM:301050<a name=\"omim-OMIM.58301050\"> </a></td><td>ALPORT SYNDROME 1, X-LINKED; ATS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:301310<a name=\"omim-OMIM.58301310\"> </a></td><td>ANEMIA, SIDEROBLASTIC, AND SPINOCEREBELLAR ATAXIA; ASAT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:304340<a name=\"omim-OMIM.58304340\"> </a></td><td>PETTIGREW SYNDROME; PGS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:305100<a name=\"omim-OMIM.58305100\"> </a></td><td>ECTODERMAL DYSPLASIA 1, HYPOHIDROTIC, X-LINKED; XHED</td></tr><tr><td style=\"white-space:nowrap\">OMIM:308350<a name=\"omim-OMIM.58308350\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 1; DEE1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:309500<a name=\"omim-OMIM.58309500\"> </a></td><td>RENPENNING SYNDROME 1; RENS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:309541<a name=\"omim-OMIM.58309541\"> </a></td><td>METHYLMALONIC ACIDEMIA AND HOMOCYSTEINEMIA, cblX TYPE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:309580<a name=\"omim-OMIM.58309580\"> </a></td><td>MENTAL RETARDATION-HYPOTONIC FACIES SYNDROME, X-LINKED, 1; MRXHF1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:310468<a name=\"omim-OMIM.58310468\"> </a></td><td>NEPHROLITHIASIS, X-LINKED RECESSIVE, WITH RENAL FAILURE; XRN</td></tr><tr><td style=\"white-space:nowrap\">OMIM:311070<a name=\"omim-OMIM.58311070\"> </a></td><td>CHARCOT-MARIE-TOOTH DISEASE, X-LINKED RECESSIVE, 5; CMTX5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:313850<a name=\"omim-OMIM.58313850\"> </a></td><td>THORACOABDOMINAL SYNDROME; THAS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:314580<a name=\"omim-OMIM.58314580\"> </a></td><td>WIEACKER-WOLFF SYNDROME; WRWF</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600059<a name=\"omim-OMIM.58600059\"> </a></td><td>RETINITIS PIGMENTOSA 13; RP13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600105<a name=\"omim-OMIM.58600105\"> </a></td><td>RETINITIS PIGMENTOSA 12; RP12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600118<a name=\"omim-OMIM.58600118\"> </a></td><td>WARBURG MICRO SYNDROME 1; WARBM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600132<a name=\"omim-OMIM.58600132\"> </a></td><td>RETINITIS PIGMENTOSA 14; RP14</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600138<a name=\"omim-OMIM.58600138\"> </a></td><td>RETINITIS PIGMENTOSA 11; RP11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600143<a name=\"omim-OMIM.58600143\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 8; CLN8</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600334<a name=\"omim-OMIM.58600334\"> </a></td><td>TIBIAL MUSCULAR DYSTROPHY, TARDIVE; TMD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600373<a name=\"omim-OMIM.58600373\"> </a></td><td>CODAS SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600618<a name=\"omim-OMIM.58600618\"> </a></td><td>ETS VARIANT GENE 6; ETV6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:600995<a name=\"omim-OMIM.58600995\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 2; NPHS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601088<a name=\"omim-OMIM.58601088\"> </a></td><td>AYME-GRIPP SYNDROME; AYGRP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601414<a name=\"omim-OMIM.58601414\"> </a></td><td>RETINITIS PIGMENTOSA 18; RP18</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601419<a name=\"omim-OMIM.58601419\"> </a></td><td>MYOPATHY, MYOFIBRILLAR, 1; MFM1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601680<a name=\"omim-OMIM.58601680\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, TYPE 2B1; DA2B1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601718<a name=\"omim-OMIM.58601718\"> </a></td><td>RETINITIS PIGMENTOSA 19; RP19</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601780<a name=\"omim-OMIM.58601780\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 6; CLN6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601815<a name=\"omim-OMIM.58601815\"> </a></td><td>PHOSPHOGLYCERATE DEHYDROGENASE DEFICIENCY; PHGDHD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:601954<a name=\"omim-OMIM.58601954\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 7; LGMDR7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:602482<a name=\"omim-OMIM.58602482\"> </a></td><td>AXENFELD-RIEGER SYNDROME, TYPE 3; RIEG3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:602579<a name=\"omim-OMIM.58602579\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ib; CDG1B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:602772<a name=\"omim-OMIM.58602772\"> </a></td><td>RETINITIS PIGMENTOSA 25; RP25</td></tr><tr><td style=\"white-space:nowrap\">OMIM:603511<a name=\"omim-OMIM.58603511\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL DOMINANT 1; LGMDD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:603896<a name=\"omim-OMIM.58603896\"> </a></td><td>LEUKOENCEPHALOPATHY WITH VANISHING WHITE MATTER; VWM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604004<a name=\"omim-OMIM.58604004\"> </a></td><td>MEGALENCEPHALIC LEUKOENCEPHALOPATHY WITH SUBCORTICAL CYSTS 1; MLC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604116<a name=\"omim-OMIM.58604116\"> </a></td><td>CONE-ROD DYSTROPHY 3; CORD3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604273<a name=\"omim-OMIM.58604273\"> </a></td><td>MITOCHONDRIAL COMPLEX V (ATP SYNTHASE) DEFICIENCY, NUCLEAR TYPE 1; MC5DN1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604286<a name=\"omim-OMIM.58604286\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 4; LGMDR4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604317<a name=\"omim-OMIM.58604317\"> </a></td><td>MICROCEPHALY 2, PRIMARY, AUTOSOMAL RECESSIVE, WITH OR WITHOUT CORTICAL MALFORMATIONS; MCPH2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604360<a name=\"omim-OMIM.58604360\"> </a></td><td>SPASTIC PARAPLEGIA 11, AUTOSOMAL RECESSIVE; SPG11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604387<a name=\"omim-OMIM.58604387\"> </a></td><td>NEPHRONOPHTHISIS 3; NPHP3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604537<a name=\"omim-OMIM.58604537\"> </a></td><td>LEBER CONGENITAL AMAUROSIS 5; LCA5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:604592<a name=\"omim-OMIM.58604592\"> </a></td><td>T CELL IMMUNE REGULATOR 1; TCIRG1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605130<a name=\"omim-OMIM.58605130\"> </a></td><td>WIEDEMANN-STEINER SYNDROME; WDSTS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605355<a name=\"omim-OMIM.58605355\"> </a></td><td>NEMALINE MYOPATHY 5; NEM5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605407<a name=\"omim-OMIM.58605407\"> </a></td><td>SEGAWA SYNDROME, AUTOSOMAL RECESSIVE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605637<a name=\"omim-OMIM.58605637\"> </a></td><td>MYOPATHY, PROXIMAL, WITH OPHTHALMOPLEGIA; MYPOP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605670<a name=\"omim-OMIM.58605670\"> </a></td><td>LATE-ONSET RETINAL DEGENERATION; LORD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605820<a name=\"omim-OMIM.58605820\"> </a></td><td>NONAKA MYOPATHY; NM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:605899<a name=\"omim-OMIM.58605899\"> </a></td><td>GLYCINE ENCEPHALOPATHY; GCE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606068<a name=\"omim-OMIM.58606068\"> </a></td><td>RETINITIS PIGMENTOSA 28; RP28</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606170<a name=\"omim-OMIM.58606170\"> </a></td><td>GENITOPATELLAR SYNDROME; GTPTS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606232<a name=\"omim-OMIM.58606232\"> </a></td><td>PHELAN-MCDERMID SYNDROME; PHMDS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606777<a name=\"omim-OMIM.58606777\"> </a></td><td>GLUT1 DEFICIENCY SYNDROME 1; GLUT1DS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606854<a name=\"omim-OMIM.58606854\"> </a></td><td>POLYMICROGYRIA, BILATERAL FRONTOPARIETAL; BFPP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606966<a name=\"omim-OMIM.58606966\"> </a></td><td>NEPHRONOPHTHISIS 4; NPHP4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:606996<a name=\"omim-OMIM.58606996\"> </a></td><td>SENIOR-LOKEN SYNDROME 4; SLSN4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607015<a name=\"omim-OMIM.58607015\"> </a></td><td>HURLER-SCHEIE SYNDROME</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607155<a name=\"omim-OMIM.58607155\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 5; MDDGC5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607196<a name=\"omim-OMIM.58607196\"> </a></td><td>MICROCEPHALY, AMISH TYPE; MCPHA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607225<a name=\"omim-OMIM.58607225\"> </a></td><td>SPASTIC PARALYSIS, INFANTILE-ONSET ASCENDING; IAHSP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607426<a name=\"omim-OMIM.58607426\"> </a></td><td>COENZYME Q10 DEFICIENCY, PRIMARY, 1; COQ10D1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607432<a name=\"omim-OMIM.58607432\"> </a></td><td>LISSENCEPHALY 1; LIS1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607483<a name=\"omim-OMIM.58607483\"> </a></td><td>THIAMINE METABOLISM DYSFUNCTION SYNDROME 2 (BIOTIN- OR THIAMINE-RESPONSIVE TYPE); THMD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607595<a name=\"omim-OMIM.58607595\"> </a></td><td>MOVED TO 175780</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607596<a name=\"omim-OMIM.58607596\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 1A; PCH1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:607855<a name=\"omim-OMIM.58607855\"> </a></td><td>MUSCULAR DYSTROPHY, CONGENITAL MEROSIN-DEFICIENT, 1A; MDC1A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608027<a name=\"omim-OMIM.58608027\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 3; PCH3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608091<a name=\"omim-OMIM.58608091\"> </a></td><td>JOUBERT SYNDROME 2; JBTS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608099<a name=\"omim-OMIM.58608099\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 3; LGMDR3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608133<a name=\"omim-OMIM.58608133\"> </a></td><td>RETINITIS PIGMENTOSA 7; RP7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608358<a name=\"omim-OMIM.58608358\"> </a></td><td>MYOPATHY, MYOSIN STORAGE, AUTOSOMAL DOMINANT; MSMA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608380<a name=\"omim-OMIM.58608380\"> </a></td><td>RETINITIS PIGMENTOSA 26; RP26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608393<a name=\"omim-OMIM.58608393\"> </a></td><td>MICROCEPHALY 6, PRIMARY, AUTOSOMAL RECESSIVE; MCPH6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608415<a name=\"omim-OMIM.58608415\"> </a></td><td>PROLONGED ELECTRORETINAL RESPONSE SUPPRESSION; PERRS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608423<a name=\"omim-OMIM.58608423\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL DOMINANT 2; LGMDD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608540<a name=\"omim-OMIM.58608540\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ik; CDG1K</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608629<a name=\"omim-OMIM.58608629\"> </a></td><td>JOUBERT SYNDROME 3; JBTS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608643<a name=\"omim-OMIM.58608643\"> </a></td><td>AROMATIC L-AMINO ACID DECARBOXYLASE DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608716<a name=\"omim-OMIM.58608716\"> </a></td><td>MICROCEPHALY 5, PRIMARY, AUTOSOMAL RECESSIVE; MCPH5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608804<a name=\"omim-OMIM.58608804\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 2; HLD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:608807<a name=\"omim-OMIM.58608807\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 10; LGMDR10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609033<a name=\"omim-OMIM.58609033\"> </a></td><td>POSTERIOR COLUMN ATAXIA WITH RETINITIS PIGMENTOSA; AXPC1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609056<a name=\"omim-OMIM.58609056\"> </a></td><td>SALT AND PEPPER DEVELOPMENTAL REGRESSION SYNDROME; SPDRS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609195<a name=\"omim-OMIM.58609195\"> </a></td><td>SPASTIC PARAPLEGIA 26, AUTOSOMAL RECESSIVE; SPG26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609200<a name=\"omim-OMIM.58609200\"> </a></td><td>MYOPATHY, MYOFIBRILLAR, 3; MFM3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609260<a name=\"omim-OMIM.58609260\"> </a></td><td>CHARCOT-MARIE-TOOTH DISEASE, AXONAL, AUTOSOMAL DOMINANT, TYPE 2A2A; CMT2A2A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609270<a name=\"omim-OMIM.58609270\"> </a></td><td>SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 7; SCAR7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609304<a name=\"omim-OMIM.58609304\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 3; DEE3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609524<a name=\"omim-OMIM.58609524\"> </a></td><td>MYOPATHY, MYOFIBRILLAR, 5; MFM5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609560<a name=\"omim-OMIM.58609560\"> </a></td><td>MITOCHONDRIAL DNA DEPLETION SYNDROME 2 (MYOPATHIC TYPE); MTDPS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:609923<a name=\"omim-OMIM.58609923\"> </a></td><td>RETINITIS PIGMENTOSA 31; RP31</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610019<a name=\"omim-OMIM.58610019\"> </a></td><td>CATARACT 18; CTRCT18</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610031<a name=\"omim-OMIM.58610031\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 7; CDCBM7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610127<a name=\"omim-OMIM.58610127\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 10; CLN10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610181<a name=\"omim-OMIM.58610181\"> </a></td><td>AICARDI-GOUTIERES SYNDROME 2; AGS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610188<a name=\"omim-OMIM.58610188\"> </a></td><td>JOUBERT SYNDROME 5; JBTS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610217<a name=\"omim-OMIM.58610217\"> </a></td><td>NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 2B; NBIA2B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610329<a name=\"omim-OMIM.58610329\"> </a></td><td>AICARDI-GOUTIERES SYNDROME 3; AGS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610333<a name=\"omim-OMIM.58610333\"> </a></td><td>AICARDI-GOUTIERES SYNDROME 4; AGS4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610359<a name=\"omim-OMIM.58610359\"> </a></td><td>RETINITIS PIGMENTOSA 33; RP33</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610443<a name=\"omim-OMIM.58610443\"> </a></td><td>KOOLEN-DE VRIES SYNDROME; KDVS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610444<a name=\"omim-OMIM.58610444\"> </a></td><td>NIGHT BLINDNESS, CONGENITAL STATIONARY, AUTOSOMAL DOMINANT 3; CSNBAD3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610489<a name=\"omim-OMIM.58610489\"> </a></td><td>PIGMENTED NODULAR ADRENOCORTICAL DISEASE, PRIMARY, 1; PPNAD1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610532<a name=\"omim-OMIM.58610532\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 5; HLD5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610688<a name=\"omim-OMIM.58610688\"> </a></td><td>JOUBERT SYNDROME 6; JBTS6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610725<a name=\"omim-OMIM.58610725\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 3; NPHS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:610951<a name=\"omim-OMIM.58610951\"> </a></td><td>CEROID LIPOFUSCINOSIS, NEURONAL, 7; CLN7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611091<a name=\"omim-OMIM.58611091\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL RECESSIVE 5; MRT5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611302<a name=\"omim-OMIM.58611302\"> </a></td><td>SPASTIC ATAXIA 2, AUTOSOMAL RECESSIVE; SPAX2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611307<a name=\"omim-OMIM.58611307\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 12; LGMDR12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611560<a name=\"omim-OMIM.58611560\"> </a></td><td>JOUBERT SYNDROME 7; JBTS7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611603<a name=\"omim-OMIM.58611603\"> </a></td><td>LISSENCEPHALY 3; LIS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611705<a name=\"omim-OMIM.58611705\"> </a></td><td>SALIH MYOPATHY; SALMY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611721<a name=\"omim-OMIM.58611721\"> </a></td><td>COMBINED SAPOSIN DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611726<a name=\"omim-OMIM.58611726\"> </a></td><td>EPILEPSY, PROGRESSIVE MYOCLONIC, 3, WITH OR WITHOUT INTRACELLULAR INCLUSIONS; EPM3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:611755<a name=\"omim-OMIM.58611755\"> </a></td><td>LEBER CONGENITAL AMAUROSIS 10; LCA10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612015<a name=\"omim-OMIM.58612015\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE In; CDG1N</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612095<a name=\"omim-OMIM.58612095\"> </a></td><td>RETINITIS PIGMENTOSA 41; RP41</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612126<a name=\"omim-OMIM.58612126\"> </a></td><td>GLUT1 DEFICIENCY SYNDROME 2; GLUT1DS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612285<a name=\"omim-OMIM.58612285\"> </a></td><td>JOUBERT SYNDROME 9; JBTS9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612337<a name=\"omim-OMIM.58612337\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 22; MRD22</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612370<a name=\"omim-OMIM.58612370\"> </a></td><td>HYPOGONADOTROPIC HYPOGONADISM 5 WITH OR WITHOUT ANOSMIA; HH5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612438<a name=\"omim-OMIM.58612438\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 6; HLD6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612528<a name=\"omim-OMIM.58612528\"> </a></td><td>DIAMOND-BLACKFAN ANEMIA 5; DBA5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612621<a name=\"omim-OMIM.58612621\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 5; MRD5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612712<a name=\"omim-OMIM.58612712\"> </a></td><td>LEBER CONGENITAL AMAUROSIS 13; LCA13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612716<a name=\"omim-OMIM.58612716\"> </a></td><td>DYSTONIA, DOPA-RESPONSIVE, DUE TO SEPIAPTERIN REDUCTASE DEFICIENCY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612780<a name=\"omim-OMIM.58612780\"> </a></td><td>SEIZURES, SENSORINEURAL DEAFNESS, ATAXIA, MENTAL RETARDATION, AND ELECTROLYTE IMBALANCE; SESAMES</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612936<a name=\"omim-OMIM.58612936\"> </a></td><td>SPASTIC PARAPLEGIA 50, AUTOSOMAL RECESSIVE; SPG50</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612943<a name=\"omim-OMIM.58612943\"> </a></td><td>RETINITIS PIGMENTOSA 42; RP42</td></tr><tr><td style=\"white-space:nowrap\">OMIM:612951<a name=\"omim-OMIM.58612951\"> </a></td><td>LEUKOENCEPHALOPATHY, CYSTIC, WITHOUT MEGALENCEPHALY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613065<a name=\"omim-OMIM.58613065\"> </a></td><td>LEUKEMIA, ACUTE LYMPHOBLASTIC; ALL</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613091<a name=\"omim-OMIM.58613091\"> </a></td><td>SHORT-RIB THORACIC DYSPLASIA 3 WITH OR WITHOUT POLYDACTYLY; SRTD3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613155<a name=\"omim-OMIM.58613155\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH IMPAIRED INTELLECTUAL IMPAIRMENT), TYPE B, 1; MDDGB1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613156<a name=\"omim-OMIM.58613156\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH IMPAIRED INTELLECTUAL DEVELOPMENT), TYPE B, 2; MDDGB2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613158<a name=\"omim-OMIM.58613158\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 2; MDDGC2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613192<a name=\"omim-OMIM.58613192\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL RECESSIVE 13; MRT13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613205<a name=\"omim-OMIM.58613205\"> </a></td><td>MUSCULAR DYSTROPHY, CONGENITAL, LMNA-RELATED</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613216<a name=\"omim-OMIM.58613216\"> </a></td><td>NIGHT BLINDNESS, CONGENITAL STATIONARY, TYPE 1C; CSNB1C</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613217<a name=\"omim-OMIM.58613217\"> </a></td><td>DIARRHEA 5, WITH TUFTING ENTEROPATHY, CONGENITAL; DIAR5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613402<a name=\"omim-OMIM.58613402\"> </a></td><td>MICROCEPHALY, SEIZURES, AND DEVELOPMENTAL DELAY; MCSZ</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613428<a name=\"omim-OMIM.58613428\"> </a></td><td>RETINITIS PIGMENTOSA 54; RP54</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613454<a name=\"omim-OMIM.58613454\"> </a></td><td>RETT SYNDROME, CONGENITAL VARIANT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613550<a name=\"omim-OMIM.58613550\"> </a></td><td>NEPHRONOPHTHISIS 11; NPHP11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613561<a name=\"omim-OMIM.58613561\"> </a></td><td>MYOPATHY, LACTIC ACIDOSIS, AND SIDEROBLASTIC ANEMIA 2; MLASA2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613587<a name=\"omim-OMIM.58613587\"> </a></td><td>OCCULT MACULAR DYSTROPHY; OCMD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613612<a name=\"omim-OMIM.58613612\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIi; CDG2I</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613660<a name=\"omim-OMIM.58613660\"> </a></td><td>CONE-ROD DYSTROPHY 15; CORD15</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613668<a name=\"omim-OMIM.58613668\"> </a></td><td>MICROCEPHALY, POSTNATAL PROGRESSIVE, WITH SEIZURES AND BRAIN ATROPHY</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613680<a name=\"omim-OMIM.58613680\"> </a></td><td>BEAULIEU-BOYCOTT-INNES SYNDROME; BBIS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613684<a name=\"omim-OMIM.58613684\"> </a></td><td>RUBINSTEIN-TAYBI SYNDROME 2; RSTS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613690<a name=\"omim-OMIM.58613690\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 7; CMH7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613706<a name=\"omim-OMIM.58613706\"> </a></td><td>NOONAN SYNDROME 7; NS7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613722<a name=\"omim-OMIM.58613722\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 12; DEE12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613731<a name=\"omim-OMIM.58613731\"> </a></td><td>RETINITIS PIGMENTOSA 4; RP4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613744<a name=\"omim-OMIM.58613744\"> </a></td><td>SPASTIC PARAPLEGIA 51, AUTOSOMAL RECESSIVE; SPG51</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613750<a name=\"omim-OMIM.58613750\"> </a></td><td>RETINITIS PIGMENTOSA 27; RP27</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613756<a name=\"omim-OMIM.58613756\"> </a></td><td>RETINITIS PIGMENTOSA 49; RP49</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613767<a name=\"omim-OMIM.58613767\"> </a></td><td>RETINITIS PIGMENTOSA 45; RP45</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613794<a name=\"omim-OMIM.58613794\"> </a></td><td>RETINITIS PIGMENTOSA 20; RP20</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613809<a name=\"omim-OMIM.58613809\"> </a></td><td>RETINITIS PIGMENTOSA 39; RP39</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613810<a name=\"omim-OMIM.58613810\"> </a></td><td>RETINITIS PIGMENTOSA 43; RP43</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613811<a name=\"omim-OMIM.58613811\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 2D; PCH2D</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613820<a name=\"omim-OMIM.58613820\"> </a></td><td>NEPHRONOPHTHISIS 12; NPHP12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613835<a name=\"omim-OMIM.58613835\"> </a></td><td>LEBER CONGENITAL AMAUROSIS 8; LCA8</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613861<a name=\"omim-OMIM.58613861\"> </a></td><td>RETINITIS PIGMENTOSA 59; RP59</td></tr><tr><td style=\"white-space:nowrap\">OMIM:613862<a name=\"omim-OMIM.58613862\"> </a></td><td>RETINITIS PIGMENTOSA 38; RP38</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614034<a name=\"omim-OMIM.58614034\"> </a></td><td>HEME OXYGENASE 1 DEFICIENCY; HMOX1D</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614065<a name=\"omim-OMIM.58614065\"> </a></td><td>MYOPATHY, DISTAL, 4; MPD4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614173<a name=\"omim-OMIM.58614173\"> </a></td><td>JOUBERT SYNDROME 13; JBTS13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614180<a name=\"omim-OMIM.58614180\"> </a></td><td>RETINITIS PIGMENTOSA 61; RP61</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614181<a name=\"omim-OMIM.58614181\"> </a></td><td>RETINITIS PIGMENTOSA 62; RP62</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614199<a name=\"omim-OMIM.58614199\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 5, WITH OR WITHOUT OCULAR ABNORMALITIES; NPHS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614202<a name=\"omim-OMIM.58614202\"> </a></td><td>RAFIQ SYNDROME; RAFQS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614225<a name=\"omim-OMIM.58614225\"> </a></td><td>WARBURG MICRO SYNDROME 2; WARBM2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614254<a name=\"omim-OMIM.58614254\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH OR WITHOUT HYPERKINETIC MOVEMENTS AND SEIZURES, AUTOSOMAL DOMINANT; NDHMSD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614255<a name=\"omim-OMIM.58614255\"> </a></td><td>NESCAV SYNDROME; NESCAVS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614299<a name=\"omim-OMIM.58614299\"> </a></td><td>MULTIPLE MITOCHONDRIAL DYSFUNCTIONS SYNDROME 2 WITH HYPERGLYCINEMIA; MMDS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614381<a name=\"omim-OMIM.58614381\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 8, WITH OR WITHOUT OLIGODONTIA AND/OR HYPOGONADOTROPIC HYPOGONADISM; HLD8</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614424<a name=\"omim-OMIM.58614424\"> </a></td><td>JOUBERT SYNDROME 14; JBTS14</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614500<a name=\"omim-OMIM.58614500\"> </a></td><td>CONE-ROD DYSTROPHY 16; CORD16</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614557<a name=\"omim-OMIM.58614557\"> </a></td><td>EHLERS-DANLOS SYNDROME, KYPHOSCOLIOTIC TYPE, 2; EDSKSCL2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614607<a name=\"omim-OMIM.58614607\"> </a></td><td>COFFIN-SIRIS SYNDROME 2; CSS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614615<a name=\"omim-OMIM.58614615\"> </a></td><td>JOUBERT SYNDROME 17; JBTS17</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614669<a name=\"omim-OMIM.58614669\"> </a></td><td>AURICULOCONDYLAR SYNDROME 2; ARCND2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614678<a name=\"omim-OMIM.58614678\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 1B; PCH1B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614744<a name=\"omim-OMIM.58614744\"> </a></td><td>FACIAL PARESIS, HEREDITARY CONGENITAL, 3; HCFP3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614753<a name=\"omim-OMIM.58614753\"> </a></td><td>SOTOS SYNDROME 2; SOTOS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614831<a name=\"omim-OMIM.58614831\"> </a></td><td>SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 13; SCAR13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614833<a name=\"omim-OMIM.58614833\"> </a></td><td>MICROCEPHALY, SHORT STATURE, AND POLYMICROGYRIA WITH OR WITHOUT SEIZURES; MSSP</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614876<a name=\"omim-OMIM.58614876\"> </a></td><td>PEROXISOME BIOGENESIS DISORDER 8A (ZELLWEGER); PBD8A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614877<a name=\"omim-OMIM.58614877\"> </a></td><td>PEROXISOME BIOGENESIS DISORDER 8B; PBD8B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614932<a name=\"omim-OMIM.58614932\"> </a></td><td>COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 13; COXPD13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614945<a name=\"omim-OMIM.58614945\"> </a></td><td>DEAFNESS, AUTOSOMAL RECESSIVE 18B; DFNB18B</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615030<a name=\"omim-OMIM.58615030\"> </a></td><td>SPASTIC PARAPLEGIA 56, AUTOSOMAL RECESSIVE; SPG56</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615031<a name=\"omim-OMIM.58615031\"> </a></td><td>SPASTIC PARAPLEGIA 49, AUTOSOMAL RECESSIVE; SPG49</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615065<a name=\"omim-OMIM.58615065\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, TYPE 5D; DA5D</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615071<a name=\"omim-OMIM.58615071\"> </a></td><td>ALAZAMI SYNDROME; ALAZS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615095<a name=\"omim-OMIM.58615095\"> </a></td><td>MICROCEPHALY 10, PRIMARY, AUTOSOMAL RECESSIVE; MCPH10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615181<a name=\"omim-OMIM.58615181\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH BRAIN AND EYE ANOMALIES), TYPE A, 11; MDDGA11</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615190<a name=\"omim-OMIM.58615190\"> </a></td><td>DYSKERATOSIS CONGENITA, AUTOSOMAL RECESSIVE 5; DKCB5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615191<a name=\"omim-OMIM.58615191\"> </a></td><td>LISSENCEPHALY 5; LIS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615268<a name=\"omim-OMIM.58615268\"> </a></td><td>CEREBELLAR ATAXIA, MENTAL RETARDATION, AND DYSEQUILIBRIUM SYNDROME 4; CAMRQ4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615286<a name=\"omim-OMIM.58615286\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL RECESSIVE 36; MRT36</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615352<a name=\"omim-OMIM.58615352\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 14; MDDGC14</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615411<a name=\"omim-OMIM.58615411\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 3; CDCBM3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615412<a name=\"omim-OMIM.58615412\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 4; CDCBM4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615419<a name=\"omim-OMIM.58615419\"> </a></td><td>HYPOTONIA, INFANTILE, WITH PSYCHOMOTOR RETARDATION AND CHARACTERISTIC FACIES 1; IHPRF1</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615471<a name=\"omim-OMIM.58615471\"> </a></td><td>MITOCHONDRIAL DNA DEPLETION SYNDROME 13 (ENCEPHALOMYOPATHIC TYPE); MTDPS13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615476<a name=\"omim-OMIM.58615476\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 18; DEE18</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615485<a name=\"omim-OMIM.58615485\"> </a></td><td>BAINBRIDGE-ROPERS SYNDROME; BRPS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615502<a name=\"omim-OMIM.58615502\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 21; MRD21</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615546<a name=\"omim-OMIM.58615546\"> </a></td><td>VAN MALDERGEM SYNDROME 2; VMLDS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615574<a name=\"omim-OMIM.58615574\"> </a></td><td>ASPARAGINE SYNTHETASE DEFICIENCY; ASNSD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615681<a name=\"omim-OMIM.58615681\"> </a></td><td>SPASTIC PARAPLEGIA 62, AUTOSOMAL RECESSIVE; SPG62</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615715<a name=\"omim-OMIM.58615715\"> </a></td><td>BONE MARROW FAILURE SYNDROME 2; BMFS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615716<a name=\"omim-OMIM.58615716\"> </a></td><td>HYPERPHOSPHATASIA WITH MENTAL RETARDATION SYNDROME 4; HPMRS4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615760<a name=\"omim-OMIM.58615760\"> </a></td><td>MICROCEPHALY, PROGRESSIVE, WITH SEIZURES AND CEREBRAL AND CEREBELLAR ATROPHY; MSCCA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615763<a name=\"omim-OMIM.58615763\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 5; CDCBM5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615809<a name=\"omim-OMIM.58615809\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 9; PCH9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615829<a name=\"omim-OMIM.58615829\"> </a></td><td>XIA-GIBBS SYNDROME; XIGIS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615834<a name=\"omim-OMIM.58615834\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 26; MRD26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615846<a name=\"omim-OMIM.58615846\"> </a></td><td>AICARDI-GOUTIERES SYNDROME 7; AGS7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615866<a name=\"omim-OMIM.58615866\"> </a></td><td>COFFIN-SIRIS SYNDROME 9; CSS9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615909<a name=\"omim-OMIM.58615909\"> </a></td><td>DIAMOND-BLACKFAN ANEMIA 13; DBA13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615948<a name=\"omim-OMIM.58615948\"> </a></td><td>OROFACIODIGITAL SYNDROME XIV; OFD14</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615959<a name=\"omim-OMIM.58615959\"> </a></td><td>MYOPATHY, CENTRONUCLEAR, 5; CNM5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615960<a name=\"omim-OMIM.58615960\"> </a></td><td>PORETTI-BOLTSHAUSER SYNDROME; PTBHS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615973<a name=\"omim-OMIM.58615973\"> </a></td><td>CONE-ROD DYSTROPHY 20; CORD20</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615981<a name=\"omim-OMIM.58615981\"> </a></td><td>BARDET-BIEDL SYNDROME 2; BBS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615982<a name=\"omim-OMIM.58615982\"> </a></td><td>BARDET-BIEDL SYNDROME 4; BBS4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615983<a name=\"omim-OMIM.58615983\"> </a></td><td>BARDET-BIEDL SYNDROME 5; BBS5</td></tr><tr><td style=\"white-space:nowrap\">OMIM:615993<a name=\"omim-OMIM.58615993\"> </a></td><td>BARDET-BIEDL SYNDROME 16; BBS16</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616051<a name=\"omim-OMIM.58616051\"> </a></td><td>MICROCEPHALY 13, PRIMARY, AUTOSOMAL RECESSIVE; MCPH13</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616056<a name=\"omim-OMIM.58616056\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 26; DEE26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616081<a name=\"omim-OMIM.58616081\"> </a></td><td>PONTOCEREBELLAR HYPOPLASIA, TYPE 1C; PCH1C</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616094<a name=\"omim-OMIM.58616094\"> </a></td><td>MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 12; MDDGC12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616127<a name=\"omim-OMIM.58616127\"> </a></td><td>SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 17; SCAR17</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616140<a name=\"omim-OMIM.58616140\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 9; HLD9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616155<a name=\"omim-OMIM.58616155\"> </a></td><td>CHARCOT-MARIE-TOOTH DISEASE, AXONAL, TYPE 2S; CMT2S</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616171<a name=\"omim-OMIM.58616171\"> </a></td><td>MICROCEPHALY AND CHORIORETINOPATHY, AUTOSOMAL RECESSIVE, 2; MCCRP2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616199<a name=\"omim-OMIM.58616199\"> </a></td><td>POLYGLUCOSAN BODY MYOPATHY 2; PGBM2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616211<a name=\"omim-OMIM.58616211\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 28; DEE28</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616263<a name=\"omim-OMIM.58616263\"> </a></td><td>NEUROLOGIC, ENDOCRINE, AND PANCREATIC DISEASE, MULTISYSTEM, INFANTILE-ONSET; IMNEPD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616266<a name=\"omim-OMIM.58616266\"> </a></td><td>CONGENITAL CONTRACTURES OF THE LIMBS AND FACE, HYPOTONIA, AND DEVELOPMENTAL DELAY; CLIFAHDD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616271<a name=\"omim-OMIM.58616271\"> </a></td><td>3-METHYLGLUTACONIC ACIDURIA, TYPE VII; MGCA7</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616277<a name=\"omim-OMIM.58616277\"> </a></td><td>MITOCHONDRIAL SHORT-CHAIN ENOYL-CoA HYDRATASE 1 DEFICIENCY; ECHS1D</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616281<a name=\"omim-OMIM.58616281\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH SPASTIC PARAPLEGIA AND MICROCEPHALY; NEDSPM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616321<a name=\"omim-OMIM.58616321\"> </a></td><td>MYASTHENIC SYNDROME, CONGENITAL, 3A, SLOW-CHANNEL; CMS3A</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616354<a name=\"omim-OMIM.58616354\"> </a></td><td>SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 20; SCAR20</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616394<a name=\"omim-OMIM.58616394\"> </a></td><td>RETINITIS PIGMENTOSA 71; RP71</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616420<a name=\"omim-OMIM.58616420\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 10; HLD10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616421<a name=\"omim-OMIM.58616421\"> </a></td><td>MYOCLONIC-ATONIC EPILEPSY; MAE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616471<a name=\"omim-OMIM.58616471\"> </a></td><td>BETHLEM MYOPATHY 2; BTHLM2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616490<a name=\"omim-OMIM.58616490\"> </a></td><td>JOUBERT SYNDROME 23; JBTS23</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616531<a name=\"omim-OMIM.58616531\"> </a></td><td>POLYMICROGYRIA, PERISYLVIAN, WITH CEREBELLAR HYPOPLASIA AND ARTHROGRYPOSIS; PMGYCHA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616544<a name=\"omim-OMIM.58616544\"> </a></td><td>RETINITIS PIGMENTOSA 73; RP73</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616562<a name=\"omim-OMIM.58616562\"> </a></td><td>RETINITIS PIGMENTOSA 74; RP74</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616564<a name=\"omim-OMIM.58616564\"> </a></td><td>NOONAN SYNDROME 10; NS10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616632<a name=\"omim-OMIM.58616632\"> </a></td><td>SEIZURES, CORTICAL BLINDNESS, AND MICROCEPHALY SYNDROME; SCBMS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616647<a name=\"omim-OMIM.58616647\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 35; DEE35</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616649<a name=\"omim-OMIM.58616649\"> </a></td><td>SPHEROCYTOSIS, TYPE 2; SPH2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616651<a name=\"omim-OMIM.58616651\"> </a></td><td>ROIFMAN SYNDROME; RFMN</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616654<a name=\"omim-OMIM.58616654\"> </a></td><td>JOUBERT SYNDROME 24; JBTS24</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616657<a name=\"omim-OMIM.58616657\"> </a></td><td>SPASTIC TETRAPLEGIA, THIN CORPUS CALLOSUM, AND PROGRESSIVE MICROCEPHALY; SPATCCM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616668<a name=\"omim-OMIM.58616668\"> </a></td><td>CHARCOT-MARIE-TOOTH DISEASE, AXONAL, TYPE 2X; CMT2X</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616683<a name=\"omim-OMIM.58616683\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 12; HLD12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616721<a name=\"omim-OMIM.58616721\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIn; CDG2N</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616732<a name=\"omim-OMIM.58616732\"> </a></td><td>OPTIC ATROPHY 10 WITH OR WITHOUT ATAXIA, MENTAL RETARDATION, AND SEIZURES; OPA10</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616738<a name=\"omim-OMIM.58616738\"> </a></td><td>RADIOULNAR SYNOSTOSIS WITH AMEGAKARYOCYTIC THROMBOCYTOPENIA 2; RUSAT2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616740<a name=\"omim-OMIM.58616740\"> </a></td><td>IMMUNODEFICIENCY 46; IMD46</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616789<a name=\"omim-OMIM.58616789\"> </a></td><td>MENTAL RETARDATION AND DISTINCTIVE FACIAL FEATURES WITH OR WITHOUT CARDIAC DEFECTS; MRFACD</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616801<a name=\"omim-OMIM.58616801\"> </a></td><td>HYPOTONIA, INFANTILE, WITH PSYCHOMOTOR RETARDATION AND CHARACTERISTIC FACIES 2; IHPRF2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616875<a name=\"omim-OMIM.58616875\"> </a></td><td>CEREBELLAR ATROPHY, VISUAL IMPAIRMENT, AND PSYCHOMOTOR RETARDATION; CAVIPMR</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616892<a name=\"omim-OMIM.58616892\"> </a></td><td>NEPHROTIC SYNDROME, TYPE 12; NPHS12</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616900<a name=\"omim-OMIM.58616900\"> </a></td><td>HYPOTONIA, INFANTILE, WITH PSYCHOMOTOR RETARDATION AND CHARACTERISTIC FACIES 3; IHPRF3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:616973<a name=\"omim-OMIM.58616973\"> </a></td><td>MENTAL RETARDATION, AUTOSOMAL DOMINANT 42; MRD42</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617011<a name=\"omim-OMIM.58617011\"> </a></td><td>MACROCEPHALY, DYSMORPHIC FACIES, AND PSYCHOMOTOR RETARDATION; MDFPMR</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617013<a name=\"omim-OMIM.58617013\"> </a></td><td>HYPERMANGANESEMIA WITH DYSTONIA 2; HMNDYT2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617047<a name=\"omim-OMIM.58617047\"> </a></td><td>CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 26; CMH26</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617052<a name=\"omim-OMIM.58617052\"> </a></td><td>BONE MARROW FAILURE SYNDROME 3; BMFS3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617053<a name=\"omim-OMIM.58617053\"> </a></td><td>MIRAGE SYNDROME; MIRAGE</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617093<a name=\"omim-OMIM.58617093\"> </a></td><td>GROWTH RETARDATION, IMPAIRED INTELLECTUAL DEVELOPMENT, HYPOTONIA, AND HEPATOPATHY; GRIDHH</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617106<a name=\"omim-OMIM.58617106\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 42; DEE42</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617120<a name=\"omim-OMIM.58617120\"> </a></td><td>JOUBERT SYNDROME 27; JBTS27</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617121<a name=\"omim-OMIM.58617121\"> </a></td><td>JOUBERT SYNDROME 28; JBTS28</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617123<a name=\"omim-OMIM.58617123\"> </a></td><td>RETINITIS PIGMENTOSA 76; RP76</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617137<a name=\"omim-OMIM.58617137\"> </a></td><td>FRONTOMETAPHYSEAL DYSPLASIA 2; FMD2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617146<a name=\"omim-OMIM.58617146\"> </a></td><td>ARTHROGRYPOSIS, DISTAL, WITH IMPAIRED PROPRIOCEPTION AND TOUCH; DAIPT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617183<a name=\"omim-OMIM.58617183\"> </a></td><td>HAREL-YOON SYNDROME; HAYOS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617193<a name=\"omim-OMIM.58617193\"> </a></td><td>ENCEPHALOPATHY, PROGRESSIVE, EARLY-ONSET, WITH BRAIN ATROPHY AND THIN CORPUS CALLOSUM; PEBAT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617222<a name=\"omim-OMIM.58617222\"> </a></td><td>SUDDEN CARDIAC FAILURE, INFANTILE; SCFI</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617276<a name=\"omim-OMIM.58617276\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 48; DEE48</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617330<a name=\"omim-OMIM.58617330\"> </a></td><td>HYPOTONIA, ATAXIA, AND DELAYED DEVELOPMENT SYNDROME; HADDS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617350<a name=\"omim-OMIM.58617350\"> </a></td><td>DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 52; DEE52</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617397<a name=\"omim-OMIM.58617397\"> </a></td><td>PSEUDO-TORCH SYNDROME 2; PTORCH2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617433<a name=\"omim-OMIM.58617433\"> </a></td><td>RETINITIS PIGMENTOSA 78; RP78</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617443<a name=\"omim-OMIM.58617443\"> </a></td><td>BLEEDING DISORDER, PLATELET-TYPE, 21; BDPLT21</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617460<a name=\"omim-OMIM.58617460\"> </a></td><td>RETINITIS PIGMENTOSA 79; RP79</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617481<a name=\"omim-OMIM.58617481\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, HYPOTONIA, AND VARIABLE BRAIN ANOMALIES; NMIHBA</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617537<a name=\"omim-OMIM.58617537\"> </a></td><td>RAHMAN SYNDROME; RMNS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617547<a name=\"omim-OMIM.58617547\"> </a></td><td>RETINAL DYSTROPHY WITH OR WITHOUT MACULAR STAPHYLOMA; RDMS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617622<a name=\"omim-OMIM.58617622\"> </a></td><td>JOUBERT SYNDROME 30; JBTS30</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617675<a name=\"omim-OMIM.58617675\"> </a></td><td>MYOPATHY, MITOCHONDRIAL, AND ATAXIA; MMYAT</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617681<a name=\"omim-OMIM.58617681\"> </a></td><td>BLEPHAROCHEILODONTIC SYNDROME 2; BCDS2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617694<a name=\"omim-OMIM.58617694\"> </a></td><td>AL KAISSI SYNDROME; ALKAS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617781<a name=\"omim-OMIM.58617781\"> </a></td><td>RETINITIS PIGMENTOSA 80; RP80</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617805<a name=\"omim-OMIM.58617805\"> </a></td><td>RENAL HYPODYSPLASIA/APLASIA 3; RHDA3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617807<a name=\"omim-OMIM.58617807\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH ATAXIC GAIT, ABSENT SPEECH, AND DECREASED CORTICAL WHITE MATTER; NDAGSCW</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617829<a name=\"omim-OMIM.58617829\"> </a></td><td>EPILEPTIC ENCEPHALOPATHY, INFANTILE OR EARLY CHILDHOOD, 2; IECEE2</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617873<a name=\"omim-OMIM.58617873\"> </a></td><td>COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 35; COXPD35</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617948<a name=\"omim-OMIM.58617948\"> </a></td><td>ELLIPTOCYTOSIS 3; EL3</td></tr><tr><td style=\"white-space:nowrap\">OMIM:617954<a name=\"omim-OMIM.58617954\"> </a></td><td>MULTIPLE MITOCHONDRIAL DYSFUNCTIONS SYNDROME 6; MMDS6</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618056<a name=\"omim-OMIM.58618056\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH CEREBELLAR ATROPHY AND WITH OR WITHOUT SEIZURES; NEDCAS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618088<a name=\"omim-OMIM.58618088\"> </a></td><td>NEURODEVELOPMENTAL DISORDER WITH REGRESSION, ABNORMAL MOVEMENTS, LOSS OF SPEECH, AND SEIZURES; NEDAMSS</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618129<a name=\"omim-OMIM.58618129\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL DOMINANT 4; LGMDD4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618138<a name=\"omim-OMIM.58618138\"> </a></td><td>MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 23; LGMDR23</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618174<a name=\"omim-OMIM.58618174\"> </a></td><td>CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 9; CDCBM9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618225<a name=\"omim-OMIM.58618225\"> </a></td><td>MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 4; MC1DN4</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618273<a name=\"omim-OMIM.58618273\"> </a></td><td>MEGA-CORPUS-CALLOSUM SYNDROME WITH CEREBELLAR HYPOPLASIA AND CORTICAL MALFORMATIONS; MCCCHCM</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618316<a name=\"omim-OMIM.58618316\"> </a></td><td>INTELLECTUAL DEVELOPMENTAL DISORDER WITH CARDIAC DEFECTS AND DYSMORPHIC FACIES; IDDCDF</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618325<a name=\"omim-OMIM.58618325\"> </a></td><td>LISSENCEPHALY 9 WITH COMPLEX BRAINSTEM MALFORMATION; LIS9</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618404<a name=\"omim-OMIM.58618404\"> </a></td><td>LEUKODYSTROPHY, HYPOMYELINATING, 18; HLD18</td></tr><tr><td style=\"white-space:nowrap\">OMIM:618512<a name=\"omim-OMIM.58618512\"> </a></td><td>O\\'DONNELL-LURIA-RODAN SYNDROME; ODLURO</td></tr><tr><td style=\"white-space:nowrap\">OMIM:614921<a name=\"omim-OMIM.58614921\"> </a></td><td>CONGENITAL DISORDER OF GLYCOSYLATION, TYPE It; CDG1T</td></tr></table></div>" - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://omim.org/"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "OMIM"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Online Mendelian Inheritance in Man"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">fhir:CodeSystem.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://omim.org/"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "OMIM"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Online Mendelian Inheritance in Man"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">fhir:CodeSystem.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">fhir:CodeSystem.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -322,11 +322,11 @@ <h2 id="root">: Online Mendelian Inheritance in Man - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "An online database that describes the function and phenotypes associated with human genes"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.caseSensitive">fhir:CodeSystem.caseSensitive</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "fragment"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.count">fhir:CodeSystem.count</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "497"^^xsd:nonNegativeInteger]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "An online database that describes the function and phenotypes associated with human genes"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.caseSensitive">fhir:CodeSystem.caseSensitive</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "fragment"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.count">fhir:CodeSystem.count</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "497"^^xsd:nonNegativeInteger]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept">fhir:CodeSystem.concept</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "OMIM:613801" ]; @@ -2319,7 +2319,7 @@ <h2 id="root">: Online Mendelian Inheritance in Man - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 497; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "OMIM:614921" ]; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.display">fhir:CodeSystem.concept.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "CONGENITAL DISORDER OF GLYCOSYLATION, TYPE It; CDG1T" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -2357,7 +2357,7 @@ <h2 id="root">: Online Mendelian Inheritance in Man - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-omim.xlsx b/CodeSystem-omim.xlsx index 58c0d9f7..06869042 100644 Binary files a/CodeSystem-omim.xlsx and b/CodeSystem-omim.xlsx differ diff --git a/CodeSystem-omim.xml b/CodeSystem-omim.xml index e210fbb1..735b99a7 100644 --- a/CodeSystem-omim.xml +++ b/CodeSystem-omim.xml @@ -11,7 +11,7 @@ <title value="Online Mendelian Inheritance in Man"/> <status value="draft"/> <experimental value="false"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/CodeSystem-omim.xml.html b/CodeSystem-omim.xml.html index 791262e5..f1fc58f1 100644 --- a/CodeSystem-omim.xml.html +++ b/CodeSystem-omim.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Online Mendelian Inheritance in Man - XML Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: Online Mendelian Inheritance in Man - XML Representation</h2> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Online Mendelian Inheritance in Man"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">experimental</a> <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">value</a>="false"/> - <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -2456,7 +2456,7 @@ <h2 id="root">: Online Mendelian Inheritance in Man - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-tbd-codes-testing.html b/CodeSystem-tbd-codes-testing.html index 4ca4cd9a..5769ecbd 100644 --- a/CodeSystem-tbd-codes-testing.html +++ b/CodeSystem-tbd-codes-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -309,7 +309,7 @@ <h2 id="root">CodeSystem: ToBeDeterminedCodes ('TbdCodes') - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-tbd-codes.change.history.html b/CodeSystem-tbd-codes.change.history.html index daa34095..0d35c2a5 100644 --- a/CodeSystem-tbd-codes.change.history.html +++ b/CodeSystem-tbd-codes.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: TbdCodes - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-tbd-codes.html b/CodeSystem-tbd-codes.html index 9ea7543b..6380929d 100644 --- a/CodeSystem-tbd-codes.html +++ b/CodeSystem-tbd-codes.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -353,7 +353,7 @@ <h2 id="root">CodeSystem: ToBeDeterminedCodes ('TbdCodes') <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-tbd-codes.json b/CodeSystem-tbd-codes.json index cf14ae5a..2ad4abaa 100644 --- a/CodeSystem-tbd-codes.json +++ b/CodeSystem-tbd-codes.json @@ -1,137 +1,125 @@ -{ - "resourceType": "CodeSystem", - "id": "tbd-codes", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style=\"white-space:nowrap\">grouper<a name=\"tbd-codes-grouper\"> </a></td><td>grouper</td><td>A means to bundle several observations such as one would find in a genetics test panel.</td></tr><tr><td style=\"white-space:nowrap\">mode-of-inheritance<a name=\"tbd-codes-mode-of-inheritance\"> </a></td><td>mode-of-inheritance</td><td>This is actually LOINC code 79742-3. And the IG will be updated</td></tr><tr><td style=\"white-space:nowrap\">effect-transporter-function<a name=\"tbd-codes-effect-transporter-function\"> </a></td><td>effect-transporter-function</td><td>Predicted phenotype for drug efficacy through transport mechanism. A single marker interpretation value known to increase or decrease the drug's performance.</td></tr><tr><td style=\"white-space:nowrap\">effect-medication-efficacy<a name=\"tbd-codes-effect-medication-efficacy\"> </a></td><td>Medication Efficacy</td><td/></tr><tr><td style=\"white-space:nowrap\">effect-medication-metabolism<a name=\"tbd-codes-effect-medication-metabolism\"> </a></td><td>Medication Metabolism</td><td/></tr><tr><td style=\"white-space:nowrap\">effect-medication-transporter<a name=\"tbd-codes-effect-medication-transporter\"> </a></td><td>Medication Transporter Function</td><td/></tr><tr><td style=\"white-space:nowrap\">effect-high-risk-allele<a name=\"tbd-codes-effect-high-risk-allele\"> </a></td><td>High Risk Allele</td><td/></tr><tr><td style=\"white-space:nowrap\">prognostic-implication<a name=\"tbd-codes-prognostic-implication\"> </a></td><td>Prognostic Implication component</td><td>Finding of whether a particular somatic genotype/haplotype/variation or combination-thereof predicts a particular outcome for the specified cancer - either on its own or in conjunction with one or more interventions.</td></tr><tr><td style=\"white-space:nowrap\">associated-cancer<a name=\"tbd-codes-associated-cancer\"> </a></td><td>associated-cancer</td><td/></tr><tr><td style=\"white-space:nowrap\">associated-therapy<a name=\"tbd-codes-associated-therapy\"> </a></td><td>Genomically linked therapy</td><td>The non-medication therapy (procedure) associated with this implication.</td></tr><tr><td style=\"white-space:nowrap\">region-coverage<a name=\"tbd-codes-region-coverage\"> </a></td><td>region-coverage</td><td>Given as a number between 0 and 100. Mean mapped read depth. Obtained by counting total number of mapped reads and divided by the number of bases in the region sequence.</td></tr><tr><td style=\"white-space:nowrap\">functional-annotation<a name=\"tbd-codes-functional-annotation\"> </a></td><td>functional-annotation</td><td>Annotated changes to sequence features caused by this variant. Terms are from the sequence ontology under SO:0001537.</td></tr><tr><td style=\"white-space:nowrap\">exact-start-end<a name=\"tbd-codes-exact-start-end\"> </a></td><td>Variant exact start and end</td><td>The genomic coordinates of the exact genomic range in which the variant resides.</td></tr><tr><td style=\"white-space:nowrap\">inner-start-end<a name=\"tbd-codes-inner-start-end\"> </a></td><td>Variant inner start and end</td><td>The genomic coordinates of the inner genomic range in which the variant might reside.</td></tr><tr><td style=\"white-space:nowrap\">outer-start-end<a name=\"tbd-codes-outer-start-end\"> </a></td><td>Variant outer start and end</td><td>The genomic coordinates of the outer genomic range in which the variant might reside.</td></tr><tr><td style=\"white-space:nowrap\">variant-inheritance<a name=\"tbd-codes-variant-inheritance\"> </a></td><td>Variant inheritance</td><td>A quality inhering in a variant by virtue of its origin. The terms are in the sequence ontology under SO:0001762.</td></tr><tr><td style=\"white-space:nowrap\">diagnostic-implication<a name=\"tbd-codes-diagnostic-implication\"> </a></td><td>Diagnostic Implication</td><td>An observation linking a genomic finding with a knowledge base, providing context that may aid in diagnosing a patient with a particular phenotype or condition.</td></tr><tr><td style=\"white-space:nowrap\">therapeutic-implication<a name=\"tbd-codes-therapeutic-implication\"> </a></td><td>Therapeutic Implication</td><td>An observation linking a genomic finding with a knowledge base, providing potential evidence of an interaction with a specified medication or non-medicinal therapy.</td></tr></table></div>" - }, - "url": "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes", - "version": "0.2.0", - "name": "TbdCodes", - "title": "ToBeDeterminedCodes ('TbdCodes')", - "status": "active", - "experimental": true, - "date": "2020-11-12T19:37:28+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "These codes are currently 'TBD-LOINC' codes. The CG WG is requesting formal LOINC codes.", - "jurisdiction": [ - { - "coding": [ - { - "system": "http://unstats.un.org/unsd/methods/m49/m49.htm", - "code": "001" - } - ] - } - ], - "content": "complete", - "count": 18, - "concept": [ - { - "code": "grouper", - "display": "grouper", - "definition": "A means to bundle several observations such as one would find in a genetics test panel." - }, - { - "code": "mode-of-inheritance", - "display": "mode-of-inheritance", - "definition": "This is actually LOINC code 79742-3. And the IG will be updated" - }, - { - "code": "effect-transporter-function", - "display": "effect-transporter-function", - "definition": "Predicted phenotype for drug efficacy through transport mechanism. A single marker interpretation value known to increase or decrease the drug's performance." - }, - { - "code": "effect-medication-efficacy", - "display": "Medication Efficacy" - }, - { - "code": "effect-medication-metabolism", - "display": "Medication Metabolism" - }, - { - "code": "effect-medication-transporter", - "display": "Medication Transporter Function" - }, - { - "code": "effect-high-risk-allele", - "display": "High Risk Allele" - }, - { - "code": "prognostic-implication", - "display": "Prognostic Implication component", - "definition": "Finding of whether a particular somatic genotype/haplotype/variation or combination-thereof predicts a particular outcome for the specified cancer - either on its own or in conjunction with one or more interventions." - }, - { - "code": "associated-cancer", - "display": "associated-cancer" - }, - { - "code": "associated-therapy", - "display": "Genomically linked therapy", - "definition": "The non-medication therapy (procedure) associated with this implication." - }, - { - "code": "region-coverage", - "display": "region-coverage", - "definition": "Given as a number between 0 and 100. Mean mapped read depth. Obtained by counting total number of mapped reads and divided by the number of bases in the region sequence." - }, - { - "code": "functional-annotation", - "display": "functional-annotation", - "definition": "Annotated changes to sequence features caused by this variant. Terms are from the sequence ontology under SO:0001537." - }, - { - "code": "exact-start-end", - "display": "Variant exact start and end", - "definition": "The genomic coordinates of the exact genomic range in which the variant resides." - }, - { - "code": "inner-start-end", - "display": "Variant inner start and end", - "definition": "The genomic coordinates of the inner genomic range in which the variant might reside." - }, - { - "code": "outer-start-end", - "display": "Variant outer start and end", - "definition": "The genomic coordinates of the outer genomic range in which the variant might reside." - }, - { - "code": "variant-inheritance", - "display": "Variant inheritance", - "definition": "A quality inhering in a variant by virtue of its origin. The terms are in the sequence ontology under SO:0001762." - }, - { - "code": "diagnostic-implication", - "display": "Diagnostic Implication", - "definition": "An observation linking a genomic finding with a knowledge base, providing context that may aid in diagnosing a patient with a particular phenotype or condition." - }, - { - "code": "therapeutic-implication", - "display": "Therapeutic Implication", - "definition": "An observation linking a genomic finding with a knowledge base, providing potential evidence of an interaction with a specified medication or non-medicinal therapy." - } - ] +{ + "resourceType" : "CodeSystem", + "id" : "tbd-codes", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style=\"white-space:nowrap\">grouper<a name=\"tbd-codes-grouper\"> </a></td><td>grouper</td><td>A means to bundle several observations such as one would find in a genetics test panel.</td></tr><tr><td style=\"white-space:nowrap\">mode-of-inheritance<a name=\"tbd-codes-mode-of-inheritance\"> </a></td><td>mode-of-inheritance</td><td>This is actually LOINC code 79742-3. And the IG will be updated</td></tr><tr><td style=\"white-space:nowrap\">effect-transporter-function<a name=\"tbd-codes-effect-transporter-function\"> </a></td><td>effect-transporter-function</td><td>Predicted phenotype for drug efficacy through transport mechanism. A single marker interpretation value known to increase or decrease the drug's performance.</td></tr><tr><td style=\"white-space:nowrap\">effect-medication-efficacy<a name=\"tbd-codes-effect-medication-efficacy\"> </a></td><td>Medication Efficacy</td><td/></tr><tr><td style=\"white-space:nowrap\">effect-medication-metabolism<a name=\"tbd-codes-effect-medication-metabolism\"> </a></td><td>Medication Metabolism</td><td/></tr><tr><td style=\"white-space:nowrap\">effect-medication-transporter<a name=\"tbd-codes-effect-medication-transporter\"> </a></td><td>Medication Transporter Function</td><td/></tr><tr><td style=\"white-space:nowrap\">effect-high-risk-allele<a name=\"tbd-codes-effect-high-risk-allele\"> </a></td><td>High Risk Allele</td><td/></tr><tr><td style=\"white-space:nowrap\">prognostic-implication<a name=\"tbd-codes-prognostic-implication\"> </a></td><td>Prognostic Implication component</td><td>Finding of whether a particular somatic genotype/haplotype/variation or combination-thereof predicts a particular outcome for the specified cancer - either on its own or in conjunction with one or more interventions.</td></tr><tr><td style=\"white-space:nowrap\">associated-cancer<a name=\"tbd-codes-associated-cancer\"> </a></td><td>associated-cancer</td><td/></tr><tr><td style=\"white-space:nowrap\">associated-therapy<a name=\"tbd-codes-associated-therapy\"> </a></td><td>Genomically linked therapy</td><td>The non-medication therapy (procedure) associated with this implication.</td></tr><tr><td style=\"white-space:nowrap\">region-coverage<a name=\"tbd-codes-region-coverage\"> </a></td><td>region-coverage</td><td>Given as a number between 0 and 100. Mean mapped read depth. Obtained by counting total number of mapped reads and divided by the number of bases in the region sequence.</td></tr><tr><td style=\"white-space:nowrap\">functional-annotation<a name=\"tbd-codes-functional-annotation\"> </a></td><td>functional-annotation</td><td>Annotated changes to sequence features caused by this variant. Terms are from the sequence ontology under SO:0001537.</td></tr><tr><td style=\"white-space:nowrap\">exact-start-end<a name=\"tbd-codes-exact-start-end\"> </a></td><td>Variant exact start and end</td><td>The genomic coordinates of the exact genomic range in which the variant resides.</td></tr><tr><td style=\"white-space:nowrap\">inner-start-end<a name=\"tbd-codes-inner-start-end\"> </a></td><td>Variant inner start and end</td><td>The genomic coordinates of the inner genomic range in which the variant might reside.</td></tr><tr><td style=\"white-space:nowrap\">outer-start-end<a name=\"tbd-codes-outer-start-end\"> </a></td><td>Variant outer start and end</td><td>The genomic coordinates of the outer genomic range in which the variant might reside.</td></tr><tr><td style=\"white-space:nowrap\">variant-inheritance<a name=\"tbd-codes-variant-inheritance\"> </a></td><td>Variant inheritance</td><td>A quality inhering in a variant by virtue of its origin. The terms are in the sequence ontology under SO:0001762.</td></tr><tr><td style=\"white-space:nowrap\">diagnostic-implication<a name=\"tbd-codes-diagnostic-implication\"> </a></td><td>Diagnostic Implication</td><td>An observation linking a genomic finding with a knowledge base, providing context that may aid in diagnosing a patient with a particular phenotype or condition.</td></tr><tr><td style=\"white-space:nowrap\">therapeutic-implication<a name=\"tbd-codes-therapeutic-implication\"> </a></td><td>Therapeutic Implication</td><td>An observation linking a genomic finding with a knowledge base, providing potential evidence of an interaction with a specified medication or non-medicinal therapy.</td></tr></table></div>" + }, + "url" : "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes", + "version" : "0.2.0", + "name" : "TbdCodes", + "title" : "ToBeDeterminedCodes ('TbdCodes')", + "status" : "active", + "experimental" : true, + "date" : "2020-11-12T19:37:28+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "These codes are currently 'TBD-LOINC' codes. The CG WG is requesting formal LOINC codes.", + "jurisdiction" : [{ + "coding" : [{ + "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm", + "code" : "001" + }] + }], + "content" : "complete", + "count" : 18, + "concept" : [{ + "code" : "grouper", + "display" : "grouper", + "definition" : "A means to bundle several observations such as one would find in a genetics test panel." + }, + { + "code" : "mode-of-inheritance", + "display" : "mode-of-inheritance", + "definition" : "This is actually LOINC code 79742-3. And the IG will be updated" + }, + { + "code" : "effect-transporter-function", + "display" : "effect-transporter-function", + "definition" : "Predicted phenotype for drug efficacy through transport mechanism. A single marker interpretation value known to increase or decrease the drug's performance." + }, + { + "code" : "effect-medication-efficacy", + "display" : "Medication Efficacy" + }, + { + "code" : "effect-medication-metabolism", + "display" : "Medication Metabolism" + }, + { + "code" : "effect-medication-transporter", + "display" : "Medication Transporter Function" + }, + { + "code" : "effect-high-risk-allele", + "display" : "High Risk Allele" + }, + { + "code" : "prognostic-implication", + "display" : "Prognostic Implication component", + "definition" : "Finding of whether a particular somatic genotype/haplotype/variation or combination-thereof predicts a particular outcome for the specified cancer - either on its own or in conjunction with one or more interventions." + }, + { + "code" : "associated-cancer", + "display" : "associated-cancer" + }, + { + "code" : "associated-therapy", + "display" : "Genomically linked therapy", + "definition" : "The non-medication therapy (procedure) associated with this implication." + }, + { + "code" : "region-coverage", + "display" : "region-coverage", + "definition" : "Given as a number between 0 and 100. Mean mapped read depth. Obtained by counting total number of mapped reads and divided by the number of bases in the region sequence." + }, + { + "code" : "functional-annotation", + "display" : "functional-annotation", + "definition" : "Annotated changes to sequence features caused by this variant. Terms are from the sequence ontology under SO:0001537." + }, + { + "code" : "exact-start-end", + "display" : "Variant exact start and end", + "definition" : "The genomic coordinates of the exact genomic range in which the variant resides." + }, + { + "code" : "inner-start-end", + "display" : "Variant inner start and end", + "definition" : "The genomic coordinates of the inner genomic range in which the variant might reside." + }, + { + "code" : "outer-start-end", + "display" : "Variant outer start and end", + "definition" : "The genomic coordinates of the outer genomic range in which the variant might reside." + }, + { + "code" : "variant-inheritance", + "display" : "Variant inheritance", + "definition" : "A quality inhering in a variant by virtue of its origin. The terms are in the sequence ontology under SO:0001762." + }, + { + "code" : "diagnostic-implication", + "display" : "Diagnostic Implication", + "definition" : "An observation linking a genomic finding with a knowledge base, providing context that may aid in diagnosing a patient with a particular phenotype or condition." + }, + { + "code" : "therapeutic-implication", + "display" : "Therapeutic Implication", + "definition" : "An observation linking a genomic finding with a knowledge base, providing potential evidence of an interaction with a specified medication or non-medicinal therapy." + }] } \ No newline at end of file diff --git a/CodeSystem-tbd-codes.json.html b/CodeSystem-tbd-codes.json.html index 9d6032ed..9e70ad8d 100644 --- a/CodeSystem-tbd-codes.json.html +++ b/CodeSystem-tbd-codes.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -451,7 +451,7 @@ <h2 id="root">: ToBeDeterminedCodes ('TbdCodes') - JSON Representation</ <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-tbd-codes.ttl b/CodeSystem-tbd-codes.ttl index 240afbd0..b2612b57 100644 --- a/CodeSystem-tbd-codes.ttl +++ b/CodeSystem-tbd-codes.ttl @@ -7,19 +7,19 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/tbd-codes> a fhir:CodeSystem; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "tbd-codes"]; + fhir:Resource.id [ fhir:value "tbd-codes"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style=\"white-space:nowrap\">grouper<a name=\"tbd-codes-grouper\"> </a></td><td>grouper</td><td>A means to bundle several observations such as one would find in a genetics test panel.</td></tr><tr><td style=\"white-space:nowrap\">mode-of-inheritance<a name=\"tbd-codes-mode-of-inheritance\"> </a></td><td>mode-of-inheritance</td><td>This is actually LOINC code 79742-3. And the IG will be updated</td></tr><tr><td style=\"white-space:nowrap\">effect-transporter-function<a name=\"tbd-codes-effect-transporter-function\"> </a></td><td>effect-transporter-function</td><td>Predicted phenotype for drug efficacy through transport mechanism. A single marker interpretation value known to increase or decrease the drug's performance.</td></tr><tr><td style=\"white-space:nowrap\">effect-medication-efficacy<a name=\"tbd-codes-effect-medication-efficacy\"> </a></td><td>Medication Efficacy</td><td/></tr><tr><td style=\"white-space:nowrap\">effect-medication-metabolism<a name=\"tbd-codes-effect-medication-metabolism\"> </a></td><td>Medication Metabolism</td><td/></tr><tr><td style=\"white-space:nowrap\">effect-medication-transporter<a name=\"tbd-codes-effect-medication-transporter\"> </a></td><td>Medication Transporter Function</td><td/></tr><tr><td style=\"white-space:nowrap\">effect-high-risk-allele<a name=\"tbd-codes-effect-high-risk-allele\"> </a></td><td>High Risk Allele</td><td/></tr><tr><td style=\"white-space:nowrap\">prognostic-implication<a name=\"tbd-codes-prognostic-implication\"> </a></td><td>Prognostic Implication component</td><td>Finding of whether a particular somatic genotype/haplotype/variation or combination-thereof predicts a particular outcome for the specified cancer - either on its own or in conjunction with one or more interventions.</td></tr><tr><td style=\"white-space:nowrap\">associated-cancer<a name=\"tbd-codes-associated-cancer\"> </a></td><td>associated-cancer</td><td/></tr><tr><td style=\"white-space:nowrap\">associated-therapy<a name=\"tbd-codes-associated-therapy\"> </a></td><td>Genomically linked therapy</td><td>The non-medication therapy (procedure) associated with this implication.</td></tr><tr><td style=\"white-space:nowrap\">region-coverage<a name=\"tbd-codes-region-coverage\"> </a></td><td>region-coverage</td><td>Given as a number between 0 and 100. Mean mapped read depth. Obtained by counting total number of mapped reads and divided by the number of bases in the region sequence.</td></tr><tr><td style=\"white-space:nowrap\">functional-annotation<a name=\"tbd-codes-functional-annotation\"> </a></td><td>functional-annotation</td><td>Annotated changes to sequence features caused by this variant. Terms are from the sequence ontology under SO:0001537.</td></tr><tr><td style=\"white-space:nowrap\">exact-start-end<a name=\"tbd-codes-exact-start-end\"> </a></td><td>Variant exact start and end</td><td>The genomic coordinates of the exact genomic range in which the variant resides.</td></tr><tr><td style=\"white-space:nowrap\">inner-start-end<a name=\"tbd-codes-inner-start-end\"> </a></td><td>Variant inner start and end</td><td>The genomic coordinates of the inner genomic range in which the variant might reside.</td></tr><tr><td style=\"white-space:nowrap\">outer-start-end<a name=\"tbd-codes-outer-start-end\"> </a></td><td>Variant outer start and end</td><td>The genomic coordinates of the outer genomic range in which the variant might reside.</td></tr><tr><td style=\"white-space:nowrap\">variant-inheritance<a name=\"tbd-codes-variant-inheritance\"> </a></td><td>Variant inheritance</td><td>A quality inhering in a variant by virtue of its origin. The terms are in the sequence ontology under SO:0001762.</td></tr><tr><td style=\"white-space:nowrap\">diagnostic-implication<a name=\"tbd-codes-diagnostic-implication\"> </a></td><td>Diagnostic Implication</td><td>An observation linking a genomic finding with a knowledge base, providing context that may aid in diagnosing a patient with a particular phenotype or condition.</td></tr><tr><td style=\"white-space:nowrap\">therapeutic-implication<a name=\"tbd-codes-therapeutic-implication\"> </a></td><td>Therapeutic Implication</td><td>An observation linking a genomic finding with a knowledge base, providing potential evidence of an interaction with a specified medication or non-medicinal therapy.</td></tr></table></div>" - ]; - fhir:CodeSystem.url [ fhir:value "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes"]; - fhir:CodeSystem.version [ fhir:value "0.2.0"]; - fhir:CodeSystem.name [ fhir:value "TbdCodes"]; - fhir:CodeSystem.title [ fhir:value "ToBeDeterminedCodes ('TbdCodes')"]; - fhir:CodeSystem.status [ fhir:value "active"]; - fhir:CodeSystem.experimental [ fhir:value "true"^^xsd:boolean]; - fhir:CodeSystem.date [ fhir:value "2020-11-12T19:37:28+00:00"^^xsd:dateTime]; - fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:CodeSystem.url [ fhir:value "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes"]; # + fhir:CodeSystem.version [ fhir:value "0.2.0"]; # + fhir:CodeSystem.name [ fhir:value "TbdCodes"]; # + fhir:CodeSystem.title [ fhir:value "ToBeDeterminedCodes ('TbdCodes')"]; # + fhir:CodeSystem.status [ fhir:value "active"]; # + fhir:CodeSystem.experimental [ fhir:value "true"^^xsd:boolean]; # + fhir:CodeSystem.date [ fhir:value "2020-11-12T19:37:28+00:00"^^xsd:dateTime]; # + fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:CodeSystem.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -37,8 +37,8 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:CodeSystem.description [ fhir:value "These codes are currently 'TBD-LOINC' codes. The CG WG is requesting formal LOINC codes."]; + ]; # + fhir:CodeSystem.description [ fhir:value "These codes are currently 'TBD-LOINC' codes. The CG WG is requesting formal LOINC codes."]; # fhir:CodeSystem.jurisdiction [ fhir:index 0; fhir:CodeableConcept.coding [ @@ -46,9 +46,9 @@ fhir:Coding.system [ fhir:value "http://unstats.un.org/unsd/methods/m49/m49.htm" ]; fhir:Coding.code [ fhir:value "001" ] ] - ]; - fhir:CodeSystem.content [ fhir:value "complete"]; - fhir:CodeSystem.count [ fhir:value "18"^^xsd:nonNegativeInteger]; + ]; # + fhir:CodeSystem.content [ fhir:value "complete"]; # + fhir:CodeSystem.count [ fhir:value "18"^^xsd:nonNegativeInteger]; # fhir:CodeSystem.concept [ fhir:index 0; fhir:CodeSystem.concept.code [ fhir:value "grouper" ]; @@ -134,7 +134,7 @@ fhir:CodeSystem.concept.code [ fhir:value "therapeutic-implication" ]; fhir:CodeSystem.concept.display [ fhir:value "Therapeutic Implication" ]; fhir:CodeSystem.concept.definition [ fhir:value "An observation linking a genomic finding with a knowledge base, providing potential evidence of an interaction with a specified medication or non-medicinal therapy." ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/CodeSystem-tbd-codes.ttl.html b/CodeSystem-tbd-codes.ttl.html index 99ef7c37..94e4f34f 100644 --- a/CodeSystem-tbd-codes.ttl.html +++ b/CodeSystem-tbd-codes.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -294,19 +294,19 @@ <h2 id="root">: ToBeDeterminedCodes ('TbdCodes') - TTL Representation</h a fhir:CodeSystem; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "tbd-codes"]; + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "tbd-codes"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style=\"white-space:nowrap\">grouper<a name=\"tbd-codes-grouper\"> </a></td><td>grouper</td><td>A means to bundle several observations such as one would find in a genetics test panel.</td></tr><tr><td style=\"white-space:nowrap\">mode-of-inheritance<a name=\"tbd-codes-mode-of-inheritance\"> </a></td><td>mode-of-inheritance</td><td>This is actually LOINC code 79742-3. And the IG will be updated</td></tr><tr><td style=\"white-space:nowrap\">effect-transporter-function<a name=\"tbd-codes-effect-transporter-function\"> </a></td><td>effect-transporter-function</td><td>Predicted phenotype for drug efficacy through transport mechanism. A single marker interpretation value known to increase or decrease the drug's performance.</td></tr><tr><td style=\"white-space:nowrap\">effect-medication-efficacy<a name=\"tbd-codes-effect-medication-efficacy\"> </a></td><td>Medication Efficacy</td><td/></tr><tr><td style=\"white-space:nowrap\">effect-medication-metabolism<a name=\"tbd-codes-effect-medication-metabolism\"> </a></td><td>Medication Metabolism</td><td/></tr><tr><td style=\"white-space:nowrap\">effect-medication-transporter<a name=\"tbd-codes-effect-medication-transporter\"> </a></td><td>Medication Transporter Function</td><td/></tr><tr><td style=\"white-space:nowrap\">effect-high-risk-allele<a name=\"tbd-codes-effect-high-risk-allele\"> </a></td><td>High Risk Allele</td><td/></tr><tr><td style=\"white-space:nowrap\">prognostic-implication<a name=\"tbd-codes-prognostic-implication\"> </a></td><td>Prognostic Implication component</td><td>Finding of whether a particular somatic genotype/haplotype/variation or combination-thereof predicts a particular outcome for the specified cancer - either on its own or in conjunction with one or more interventions.</td></tr><tr><td style=\"white-space:nowrap\">associated-cancer<a name=\"tbd-codes-associated-cancer\"> </a></td><td>associated-cancer</td><td/></tr><tr><td style=\"white-space:nowrap\">associated-therapy<a name=\"tbd-codes-associated-therapy\"> </a></td><td>Genomically linked therapy</td><td>The non-medication therapy (procedure) associated with this implication.</td></tr><tr><td style=\"white-space:nowrap\">region-coverage<a name=\"tbd-codes-region-coverage\"> </a></td><td>region-coverage</td><td>Given as a number between 0 and 100. Mean mapped read depth. Obtained by counting total number of mapped reads and divided by the number of bases in the region sequence.</td></tr><tr><td style=\"white-space:nowrap\">functional-annotation<a name=\"tbd-codes-functional-annotation\"> </a></td><td>functional-annotation</td><td>Annotated changes to sequence features caused by this variant. Terms are from the sequence ontology under SO:0001537.</td></tr><tr><td style=\"white-space:nowrap\">exact-start-end<a name=\"tbd-codes-exact-start-end\"> </a></td><td>Variant exact start and end</td><td>The genomic coordinates of the exact genomic range in which the variant resides.</td></tr><tr><td style=\"white-space:nowrap\">inner-start-end<a name=\"tbd-codes-inner-start-end\"> </a></td><td>Variant inner start and end</td><td>The genomic coordinates of the inner genomic range in which the variant might reside.</td></tr><tr><td style=\"white-space:nowrap\">outer-start-end<a name=\"tbd-codes-outer-start-end\"> </a></td><td>Variant outer start and end</td><td>The genomic coordinates of the outer genomic range in which the variant might reside.</td></tr><tr><td style=\"white-space:nowrap\">variant-inheritance<a name=\"tbd-codes-variant-inheritance\"> </a></td><td>Variant inheritance</td><td>A quality inhering in a variant by virtue of its origin. The terms are in the sequence ontology under SO:0001762.</td></tr><tr><td style=\"white-space:nowrap\">diagnostic-implication<a name=\"tbd-codes-diagnostic-implication\"> </a></td><td>Diagnostic Implication</td><td>An observation linking a genomic finding with a knowledge base, providing context that may aid in diagnosing a patient with a particular phenotype or condition.</td></tr><tr><td style=\"white-space:nowrap\">therapeutic-implication<a name=\"tbd-codes-therapeutic-implication\"> </a></td><td>Therapeutic Implication</td><td>An observation linking a genomic finding with a knowledge base, providing potential evidence of an interaction with a specified medication or non-medicinal therapy.</td></tr></table></div>" - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "TbdCodes"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ToBeDeterminedCodes ('TbdCodes')"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">fhir:CodeSystem.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2020-11-12T19:37:28+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "TbdCodes"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ToBeDeterminedCodes ('TbdCodes')"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">fhir:CodeSystem.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2020-11-12T19:37:28+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">fhir:CodeSystem.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -322,17 +322,17 @@ <h2 id="root">: ToBeDeterminedCodes ('TbdCodes') - TTL Representation</h <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "These codes are currently 'TBD-LOINC' codes. The CG WG is requesting formal LOINC codes."]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "These codes are currently 'TBD-LOINC' codes. The CG WG is requesting formal LOINC codes."]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.jurisdiction">fhir:CodeSystem.jurisdiction</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://unstats.un.org/unsd/methods/m49/m49.htm" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "001" ] ] - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "complete"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.count">fhir:CodeSystem.count</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "18"^^xsd:nonNegativeInteger]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "complete"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.count">fhir:CodeSystem.count</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "18"^^xsd:nonNegativeInteger]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept">fhir:CodeSystem.concept</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "grouper" ]; @@ -418,7 +418,7 @@ <h2 id="root">: ToBeDeterminedCodes ('TbdCodes') - TTL Representation</h <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "therapeutic-implication" ]; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.display">fhir:CodeSystem.concept.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Therapeutic Implication" ]; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.definition">fhir:CodeSystem.concept.definition</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "An observation linking a genomic finding with a knowledge base, providing potential evidence of an interaction with a specified medication or non-medicinal therapy." ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -456,7 +456,7 @@ <h2 id="root">: ToBeDeterminedCodes ('TbdCodes') - TTL Representation</h <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-tbd-codes.xlsx b/CodeSystem-tbd-codes.xlsx index ab8912f7..faf4a620 100644 Binary files a/CodeSystem-tbd-codes.xlsx and b/CodeSystem-tbd-codes.xlsx differ diff --git a/CodeSystem-tbd-codes.xml.html b/CodeSystem-tbd-codes.xml.html index bbd3d2e2..f1e55ec0 100644 --- a/CodeSystem-tbd-codes.xml.html +++ b/CodeSystem-tbd-codes.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -454,7 +454,7 @@ <h2 id="root">: ToBeDeterminedCodes ('TbdCodes') - XML Representation</h <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-v3-hgvs-testing.html b/CodeSystem-v3-hgvs-testing.html index c7d5ba21..c8178348 100644 --- a/CodeSystem-v3-hgvs-testing.html +++ b/CodeSystem-v3-hgvs-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -309,7 +309,7 @@ <h2 id="root">CodeSystem: Human Genome Variation Society nomenclature - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-v3-hgvs.change.history.html b/CodeSystem-v3-hgvs.change.history.html index 1852fd08..e1a01479 100644 --- a/CodeSystem-v3-hgvs.change.history.html +++ b/CodeSystem-v3-hgvs.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Hgvs - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-v3-hgvs.html b/CodeSystem-v3-hgvs.html index 00fea140..67cf02e8 100644 --- a/CodeSystem-v3-hgvs.html +++ b/CodeSystem-v3-hgvs.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -370,7 +370,7 @@ <h2 id="root">CodeSystem: Human Genome Variation Society nomenclature <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-v3-hgvs.json b/CodeSystem-v3-hgvs.json index 478d0f33..200568df 100644 --- a/CodeSystem-v3-hgvs.json +++ b/CodeSystem-v3-hgvs.json @@ -1,320 +1,310 @@ -{ - "resourceType": "CodeSystem", - "id": "v3-hgvs", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://varnomen.hgvs.org</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td></tr><tr><td style=\"white-space:nowrap\">c.10283T>G<a name=\"v3-hgvs-c.4610283T.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1090delA<a name=\"v3-hgvs-c.461090delA\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1100 G>T<a name=\"v3-hgvs-c.461100G.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1130G>A<a name=\"v3-hgvs-c.461130G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.11521C>G<a name=\"v3-hgvs-c.4611521C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1152_1170del<a name=\"v3-hgvs-c.461152_1170del\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1243A>C<a name=\"v3-hgvs-c.461243A.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1378C>T<a name=\"v3-hgvs-c.461378C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1528 G>C<a name=\"v3-hgvs-c.461528G.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1558C>T<a name=\"v3-hgvs-c.461558C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1559C>T<a name=\"v3-hgvs-c.461559C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.158G>T<a name=\"v3-hgvs-c.46158G.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1640A>G<a name=\"v3-hgvs-c.461640A.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1720C>T<a name=\"v3-hgvs-c.461720C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1823T>G<a name=\"v3-hgvs-c.461823T.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2056+1G>T<a name=\"v3-hgvs-c.462056.431G.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2159 A>T<a name=\"v3-hgvs-c.462159A.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.223delG<a name=\"v3-hgvs-c.46223delG\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2258C>G<a name=\"v3-hgvs-c.462258C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.226C>T<a name=\"v3-hgvs-c.46226C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2303C>T<a name=\"v3-hgvs-c.462303C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2332G>A<a name=\"v3-hgvs-c.462332G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2405G>T<a name=\"v3-hgvs-c.462405G.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2471T>C<a name=\"v3-hgvs-c.462471T.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2539_2541del<a name=\"v3-hgvs-c.462539_2541del\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.257 G>A<a name=\"v3-hgvs-c.46257G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.265T>A<a name=\"v3-hgvs-c.46265T.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2662G>A<a name=\"v3-hgvs-c.462662G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2674C>A<a name=\"v3-hgvs-c.462674C.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.26_28delAGC<a name=\"v3-hgvs-c.4626_28delAGC\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.296 C>T<a name=\"v3-hgvs-c.46296C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.314delA<a name=\"v3-hgvs-c.46314delA\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.320del<a name=\"v3-hgvs-c.46320del\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.3478G>A<a name=\"v3-hgvs-c.463478G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.349 C>T<a name=\"v3-hgvs-c.46349C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.350delC<a name=\"v3-hgvs-c.46350delC\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.4009 G>A<a name=\"v3-hgvs-c.464009G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.416T>G<a name=\"v3-hgvs-c.46416T.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.441_457del<a name=\"v3-hgvs-c.46441_457del\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.448 C>G<a name=\"v3-hgvs-c.46448C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.481C>G<a name=\"v3-hgvs-c.46481C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5 A>G<a name=\"v3-hgvs-c.465A.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5294G>A<a name=\"v3-hgvs-c.465294G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5375C>T<a name=\"v3-hgvs-c.465375C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5380C>T<a name=\"v3-hgvs-c.465380C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5549C>G<a name=\"v3-hgvs-c.465549C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5693 G>A<a name=\"v3-hgvs-c.465693G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.619 G>A<a name=\"v3-hgvs-c.46619G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.685+1G>C<a name=\"v3-hgvs-c.46685.431G.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.7003C>T<a name=\"v3-hgvs-c.467003C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.700C>A<a name=\"v3-hgvs-c.46700C.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.716C>G<a name=\"v3-hgvs-c.46716C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.760 C>A<a name=\"v3-hgvs-c.46760C.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.7955G>A<a name=\"v3-hgvs-c.467955G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.7975C>T<a name=\"v3-hgvs-c.467975C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.8056C>G<a name=\"v3-hgvs-c.468056C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.851G>C<a name=\"v3-hgvs-c.46851G.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.863_864insACCT<a name=\"v3-hgvs-c.46863_864insACCT\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.868G>A<a name=\"v3-hgvs-c.46868G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.931C>T<a name=\"v3-hgvs-c.46931C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.9552G>A<a name=\"v3-hgvs-c.469552G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.959C>T<a name=\"v3-hgvs-c.46959C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.[711G>T;712C>A]<a name=\"v3-hgvs-c.46.91711G.62T.59712C.62A.93\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Arg2659Trp)<a name=\"v3-hgvs-p.46.40Arg2659Trp.41\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Gln9del)<a name=\"v3-hgvs-p.46.40Gln9del.41\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Leu3428Arg)<a name=\"v3-hgvs-p.46.40Leu3428Arg.41\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Met3184Ile)<a name=\"v3-hgvs-p.46.40Met3184Ile.41\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Pro460Ser)<a name=\"v3-hgvs-p.46.40Pro460Ser.41\"> </a></td></tr></table></div>" - }, - "url": "http://varnomen.hgvs.org", - "identifier": [ - { - "system": "urn:ietf:rfc:3986", - "value": "urn:oid:2.16.840.1.113883.6.282" - } - ], - "version": "0.2.0", - "name": "Hgvs", - "title": "Human Genome Variation Society nomenclature", - "status": "active", - "experimental": false, - "date": "2019-03-20T00:00:00-04:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "HGVS nomenclatures are the guidelines for mutation nomenclature made by the Human Genome Variation Society.\n\nHGVS nomenclature can be used with the HL7 coded data type (code data type that accepts expression data, or a coded expression data type). This coded data type should be able to distinguish expressions in HGVS nomenclature from coded concepts. For example, in the HL7 messages specified according to the HL7 V2 Clinical Genomics Fully LOINC-Qualified Genetic Variation Model, HGVS nomenclature can be used to as the observation values for DNA sequence variations. For example, OBX|1|CWE|48004-6^DNA Sequence Variation^LN||c.1129C>T^^HGVS|\n\nVersioning information: The HGVS nomenclature for the description of sequence variants was last modified Feb 20, 2008. The HGVS nomenclature for the description of protein sequence variants was last modified May 12, 2007. The HGVS nomenclature for the description of DNA sequence variants was last modified June 15, 2007 The HGVS nomenclature for the description of RNA sequence variants was last modified May 12, 2007\n\nHGVS nomenclatures can be used freely by the public.", - "content": "complete", - "count": 68, - "concept": [ - { - "code": "c.10283T>G", - "display": "c.10283T>G" - }, - { - "code": "c.1090delA", - "display": "c.1090delA" - }, - { - "code": "c.1100 G>T", - "display": "c.1100 G>T" - }, - { - "code": "c.1130G>A", - "display": "c.1130G>A" - }, - { - "code": "c.11521C>G", - "display": "c.11521C>G" - }, - { - "code": "c.1152_1170del", - "display": "c.1152_1170del" - }, - { - "code": "c.1243A>C", - "display": "c.1243A>C" - }, - { - "code": "c.1378C>T", - "display": "c.1378C>T" - }, - { - "code": "c.1528 G>C", - "display": "c.1528 G>C" - }, - { - "code": "c.1558C>T", - "display": "c.1558C>T" - }, - { - "code": "c.1559C>T", - "display": "c.1559C>T" - }, - { - "code": "c.158G>T", - "display": "c.158G>T" - }, - { - "code": "c.1640A>G", - "display": "c.1640A>G" - }, - { - "code": "c.1720C>T", - "display": "c.1720C>T" - }, - { - "code": "c.1823T>G", - "display": "c.1823T>G" - }, - { - "code": "c.2056+1G>T", - "display": "c.2056+1G>T" - }, - { - "code": "c.2159 A>T", - "display": "c.2159 A>T" - }, - { - "code": "c.223delG", - "display": "c.223delG" - }, - { - "code": "c.2258C>G", - "display": "c.2258C>G" - }, - { - "code": "c.226C>T", - "display": "c.226C>T" - }, - { - "code": "c.2303C>T", - "display": "c.2303C>T" - }, - { - "code": "c.2332G>A", - "display": "c.2332G>A" - }, - { - "code": "c.2405G>T", - "display": "c.2405G>T" - }, - { - "code": "c.2471T>C", - "display": "c.2471T>C" - }, - { - "code": "c.2539_2541del", - "display": "c.2539_2541del" - }, - { - "code": "c.257 G>A", - "display": "c.257 G>A" - }, - { - "code": "c.265T>A", - "display": "c.265T>A" - }, - { - "code": "c.2662G>A", - "display": "c.2662G>A" - }, - { - "code": "c.2674C>A", - "display": "c.2674C>A" - }, - { - "code": "c.26_28delAGC", - "display": "c.26_28delAGC" - }, - { - "code": "c.296 C>T", - "display": "c.296 C>T" - }, - { - "code": "c.314delA", - "display": "c.314delA" - }, - { - "code": "c.320del", - "display": "c.320del" - }, - { - "code": "c.3478G>A", - "display": "c.3478G>A" - }, - { - "code": "c.349 C>T", - "display": "c.349 C>T" - }, - { - "code": "c.350delC", - "display": "c.350delC" - }, - { - "code": "c.4009 G>A", - "display": "c.4009 G>A" - }, - { - "code": "c.416T>G", - "display": "c.416T>G" - }, - { - "code": "c.441_457del", - "display": "c.441_457del" - }, - { - "code": "c.448 C>G", - "display": "c.448 C>G" - }, - { - "code": "c.481C>G", - "display": "c.481C>G" - }, - { - "code": "c.5 A>G", - "display": "c.5 A>G" - }, - { - "code": "c.5294G>A", - "display": "c.5294G>A" - }, - { - "code": "c.5375C>T", - "display": "c.5375C>T" - }, - { - "code": "c.5380C>T", - "display": "c.5380C>T" - }, - { - "code": "c.5549C>G", - "display": "c.5549C>G" - }, - { - "code": "c.5693 G>A", - "display": "c.5693 G>A" - }, - { - "code": "c.619 G>A", - "display": "c.619 G>A" - }, - { - "code": "c.685+1G>C", - "display": "c.685+1G>C" - }, - { - "code": "c.7003C>T", - "display": "c.7003C>T" - }, - { - "code": "c.700C>A", - "display": "c.700C>A" - }, - { - "code": "c.716C>G", - "display": "c.716C>G" - }, - { - "code": "c.760 C>A", - "display": "c.760 C>A" - }, - { - "code": "c.7955G>A", - "display": "c.7955G>A" - }, - { - "code": "c.7975C>T", - "display": "c.7975C>T" - }, - { - "code": "c.8056C>G", - "display": "c.8056C>G" - }, - { - "code": "c.851G>C", - "display": "c.851G>C" - }, - { - "code": "c.863_864insACCT", - "display": "c.863_864insACCT" - }, - { - "code": "c.868G>A", - "display": "c.868G>A" - }, - { - "code": "c.931C>T", - "display": "c.931C>T" - }, - { - "code": "c.9552G>A", - "display": "c.9552G>A" - }, - { - "code": "c.959C>T", - "display": "c.959C>T" - }, - { - "code": "c.[711G>T;712C>A]", - "display": "c.[711G>T;712C>A]" - }, - { - "code": "p.(Arg2659Trp)", - "display": "p.(Arg2659Trp)" - }, - { - "code": "p.(Gln9del)", - "display": "p.(Gln9del)" - }, - { - "code": "p.(Leu3428Arg)", - "display": "p.(Leu3428Arg)" - }, - { - "code": "p.(Met3184Ile)", - "display": "p.(Met3184Ile)" - }, - { - "code": "p.(Pro460Ser)", - "display": "p.(Pro460Ser)" - } - ] +{ + "resourceType" : "CodeSystem", + "id" : "v3-hgvs", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://varnomen.hgvs.org</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td></tr><tr><td style=\"white-space:nowrap\">c.10283T>G<a name=\"v3-hgvs-c.4610283T.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1090delA<a name=\"v3-hgvs-c.461090delA\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1100 G>T<a name=\"v3-hgvs-c.461100G.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1130G>A<a name=\"v3-hgvs-c.461130G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.11521C>G<a name=\"v3-hgvs-c.4611521C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1152_1170del<a name=\"v3-hgvs-c.461152_1170del\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1243A>C<a name=\"v3-hgvs-c.461243A.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1378C>T<a name=\"v3-hgvs-c.461378C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1528 G>C<a name=\"v3-hgvs-c.461528G.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1558C>T<a name=\"v3-hgvs-c.461558C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1559C>T<a name=\"v3-hgvs-c.461559C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.158G>T<a name=\"v3-hgvs-c.46158G.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1640A>G<a name=\"v3-hgvs-c.461640A.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1720C>T<a name=\"v3-hgvs-c.461720C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1823T>G<a name=\"v3-hgvs-c.461823T.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2056+1G>T<a name=\"v3-hgvs-c.462056.431G.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2159 A>T<a name=\"v3-hgvs-c.462159A.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.223delG<a name=\"v3-hgvs-c.46223delG\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2258C>G<a name=\"v3-hgvs-c.462258C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.226C>T<a name=\"v3-hgvs-c.46226C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2303C>T<a name=\"v3-hgvs-c.462303C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2332G>A<a name=\"v3-hgvs-c.462332G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2405G>T<a name=\"v3-hgvs-c.462405G.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2471T>C<a name=\"v3-hgvs-c.462471T.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2539_2541del<a name=\"v3-hgvs-c.462539_2541del\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.257 G>A<a name=\"v3-hgvs-c.46257G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.265T>A<a name=\"v3-hgvs-c.46265T.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2662G>A<a name=\"v3-hgvs-c.462662G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2674C>A<a name=\"v3-hgvs-c.462674C.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.26_28delAGC<a name=\"v3-hgvs-c.4626_28delAGC\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.296 C>T<a name=\"v3-hgvs-c.46296C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.314delA<a name=\"v3-hgvs-c.46314delA\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.320del<a name=\"v3-hgvs-c.46320del\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.3478G>A<a name=\"v3-hgvs-c.463478G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.349 C>T<a name=\"v3-hgvs-c.46349C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.350delC<a name=\"v3-hgvs-c.46350delC\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.4009 G>A<a name=\"v3-hgvs-c.464009G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.416T>G<a name=\"v3-hgvs-c.46416T.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.441_457del<a name=\"v3-hgvs-c.46441_457del\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.448 C>G<a name=\"v3-hgvs-c.46448C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.481C>G<a name=\"v3-hgvs-c.46481C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5 A>G<a name=\"v3-hgvs-c.465A.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5294G>A<a name=\"v3-hgvs-c.465294G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5375C>T<a name=\"v3-hgvs-c.465375C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5380C>T<a name=\"v3-hgvs-c.465380C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5549C>G<a name=\"v3-hgvs-c.465549C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5693 G>A<a name=\"v3-hgvs-c.465693G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.619 G>A<a name=\"v3-hgvs-c.46619G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.685+1G>C<a name=\"v3-hgvs-c.46685.431G.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.7003C>T<a name=\"v3-hgvs-c.467003C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.700C>A<a name=\"v3-hgvs-c.46700C.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.716C>G<a name=\"v3-hgvs-c.46716C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.760 C>A<a name=\"v3-hgvs-c.46760C.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.7955G>A<a name=\"v3-hgvs-c.467955G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.7975C>T<a name=\"v3-hgvs-c.467975C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.8056C>G<a name=\"v3-hgvs-c.468056C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.851G>C<a name=\"v3-hgvs-c.46851G.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.863_864insACCT<a name=\"v3-hgvs-c.46863_864insACCT\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.868G>A<a name=\"v3-hgvs-c.46868G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.931C>T<a name=\"v3-hgvs-c.46931C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.9552G>A<a name=\"v3-hgvs-c.469552G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.959C>T<a name=\"v3-hgvs-c.46959C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.[711G>T;712C>A]<a name=\"v3-hgvs-c.46.91711G.62T.59712C.62A.93\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Arg2659Trp)<a name=\"v3-hgvs-p.46.40Arg2659Trp.41\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Gln9del)<a name=\"v3-hgvs-p.46.40Gln9del.41\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Leu3428Arg)<a name=\"v3-hgvs-p.46.40Leu3428Arg.41\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Met3184Ile)<a name=\"v3-hgvs-p.46.40Met3184Ile.41\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Pro460Ser)<a name=\"v3-hgvs-p.46.40Pro460Ser.41\"> </a></td></tr></table></div>" + }, + "url" : "http://varnomen.hgvs.org", + "identifier" : [{ + "system" : "urn:ietf:rfc:3986", + "value" : "urn:oid:2.16.840.1.113883.6.282" + }], + "version" : "0.2.0", + "name" : "Hgvs", + "title" : "Human Genome Variation Society nomenclature", + "status" : "active", + "experimental" : false, + "date" : "2019-03-20T00:00:00-04:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "HGVS nomenclatures are the guidelines for mutation nomenclature made by the Human Genome Variation Society.\n\nHGVS nomenclature can be used with the HL7 coded data type (code data type that accepts expression data, or a coded expression data type). This coded data type should be able to distinguish expressions in HGVS nomenclature from coded concepts. For example, in the HL7 messages specified according to the HL7 V2 Clinical Genomics Fully LOINC-Qualified Genetic Variation Model, HGVS nomenclature can be used to as the observation values for DNA sequence variations. For example, OBX|1|CWE|48004-6^DNA Sequence Variation^LN||c.1129C>T^^HGVS|\n\nVersioning information: The HGVS nomenclature for the description of sequence variants was last modified Feb 20, 2008. The HGVS nomenclature for the description of protein sequence variants was last modified May 12, 2007. The HGVS nomenclature for the description of DNA sequence variants was last modified June 15, 2007 The HGVS nomenclature for the description of RNA sequence variants was last modified May 12, 2007\n\nHGVS nomenclatures can be used freely by the public.", + "content" : "complete", + "count" : 68, + "concept" : [{ + "code" : "c.10283T>G", + "display" : "c.10283T>G" + }, + { + "code" : "c.1090delA", + "display" : "c.1090delA" + }, + { + "code" : "c.1100 G>T", + "display" : "c.1100 G>T" + }, + { + "code" : "c.1130G>A", + "display" : "c.1130G>A" + }, + { + "code" : "c.11521C>G", + "display" : "c.11521C>G" + }, + { + "code" : "c.1152_1170del", + "display" : "c.1152_1170del" + }, + { + "code" : "c.1243A>C", + "display" : "c.1243A>C" + }, + { + "code" : "c.1378C>T", + "display" : "c.1378C>T" + }, + { + "code" : "c.1528 G>C", + "display" : "c.1528 G>C" + }, + { + "code" : "c.1558C>T", + "display" : "c.1558C>T" + }, + { + "code" : "c.1559C>T", + "display" : "c.1559C>T" + }, + { + "code" : "c.158G>T", + "display" : "c.158G>T" + }, + { + "code" : "c.1640A>G", + "display" : "c.1640A>G" + }, + { + "code" : "c.1720C>T", + "display" : "c.1720C>T" + }, + { + "code" : "c.1823T>G", + "display" : "c.1823T>G" + }, + { + "code" : "c.2056+1G>T", + "display" : "c.2056+1G>T" + }, + { + "code" : "c.2159 A>T", + "display" : "c.2159 A>T" + }, + { + "code" : "c.223delG", + "display" : "c.223delG" + }, + { + "code" : "c.2258C>G", + "display" : "c.2258C>G" + }, + { + "code" : "c.226C>T", + "display" : "c.226C>T" + }, + { + "code" : "c.2303C>T", + "display" : "c.2303C>T" + }, + { + "code" : "c.2332G>A", + "display" : "c.2332G>A" + }, + { + "code" : "c.2405G>T", + "display" : "c.2405G>T" + }, + { + "code" : "c.2471T>C", + "display" : "c.2471T>C" + }, + { + "code" : "c.2539_2541del", + "display" : "c.2539_2541del" + }, + { + "code" : "c.257 G>A", + "display" : "c.257 G>A" + }, + { + "code" : "c.265T>A", + "display" : "c.265T>A" + }, + { + "code" : "c.2662G>A", + "display" : "c.2662G>A" + }, + { + "code" : "c.2674C>A", + "display" : "c.2674C>A" + }, + { + "code" : "c.26_28delAGC", + "display" : "c.26_28delAGC" + }, + { + "code" : "c.296 C>T", + "display" : "c.296 C>T" + }, + { + "code" : "c.314delA", + "display" : "c.314delA" + }, + { + "code" : "c.320del", + "display" : "c.320del" + }, + { + "code" : "c.3478G>A", + "display" : "c.3478G>A" + }, + { + "code" : "c.349 C>T", + "display" : "c.349 C>T" + }, + { + "code" : "c.350delC", + "display" : "c.350delC" + }, + { + "code" : "c.4009 G>A", + "display" : "c.4009 G>A" + }, + { + "code" : "c.416T>G", + "display" : "c.416T>G" + }, + { + "code" : "c.441_457del", + "display" : "c.441_457del" + }, + { + "code" : "c.448 C>G", + "display" : "c.448 C>G" + }, + { + "code" : "c.481C>G", + "display" : "c.481C>G" + }, + { + "code" : "c.5 A>G", + "display" : "c.5 A>G" + }, + { + "code" : "c.5294G>A", + "display" : "c.5294G>A" + }, + { + "code" : "c.5375C>T", + "display" : "c.5375C>T" + }, + { + "code" : "c.5380C>T", + "display" : "c.5380C>T" + }, + { + "code" : "c.5549C>G", + "display" : "c.5549C>G" + }, + { + "code" : "c.5693 G>A", + "display" : "c.5693 G>A" + }, + { + "code" : "c.619 G>A", + "display" : "c.619 G>A" + }, + { + "code" : "c.685+1G>C", + "display" : "c.685+1G>C" + }, + { + "code" : "c.7003C>T", + "display" : "c.7003C>T" + }, + { + "code" : "c.700C>A", + "display" : "c.700C>A" + }, + { + "code" : "c.716C>G", + "display" : "c.716C>G" + }, + { + "code" : "c.760 C>A", + "display" : "c.760 C>A" + }, + { + "code" : "c.7955G>A", + "display" : "c.7955G>A" + }, + { + "code" : "c.7975C>T", + "display" : "c.7975C>T" + }, + { + "code" : "c.8056C>G", + "display" : "c.8056C>G" + }, + { + "code" : "c.851G>C", + "display" : "c.851G>C" + }, + { + "code" : "c.863_864insACCT", + "display" : "c.863_864insACCT" + }, + { + "code" : "c.868G>A", + "display" : "c.868G>A" + }, + { + "code" : "c.931C>T", + "display" : "c.931C>T" + }, + { + "code" : "c.9552G>A", + "display" : "c.9552G>A" + }, + { + "code" : "c.959C>T", + "display" : "c.959C>T" + }, + { + "code" : "c.[711G>T;712C>A]", + "display" : "c.[711G>T;712C>A]" + }, + { + "code" : "p.(Arg2659Trp)", + "display" : "p.(Arg2659Trp)" + }, + { + "code" : "p.(Gln9del)", + "display" : "p.(Gln9del)" + }, + { + "code" : "p.(Leu3428Arg)", + "display" : "p.(Leu3428Arg)" + }, + { + "code" : "p.(Met3184Ile)", + "display" : "p.(Met3184Ile)" + }, + { + "code" : "p.(Pro460Ser)", + "display" : "p.(Pro460Ser)" + }] } \ No newline at end of file diff --git a/CodeSystem-v3-hgvs.json.html b/CodeSystem-v3-hgvs.json.html index f542e9f9..23ffb746 100644 --- a/CodeSystem-v3-hgvs.json.html +++ b/CodeSystem-v3-hgvs.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -634,7 +634,7 @@ <h2 id="root">: Human Genome Variation Society nomenclature - JSON Representatio <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-v3-hgvs.ttl b/CodeSystem-v3-hgvs.ttl index 7b4e349c..91f334d1 100644 --- a/CodeSystem-v3-hgvs.ttl +++ b/CodeSystem-v3-hgvs.ttl @@ -7,24 +7,24 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/v3-hgvs> a fhir:CodeSystem; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "v3-hgvs"]; + fhir:Resource.id [ fhir:value "v3-hgvs"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://varnomen.hgvs.org</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td></tr><tr><td style=\"white-space:nowrap\">c.10283T>G<a name=\"v3-hgvs-c.4610283T.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1090delA<a name=\"v3-hgvs-c.461090delA\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1100 G>T<a name=\"v3-hgvs-c.461100G.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1130G>A<a name=\"v3-hgvs-c.461130G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.11521C>G<a name=\"v3-hgvs-c.4611521C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1152_1170del<a name=\"v3-hgvs-c.461152_1170del\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1243A>C<a name=\"v3-hgvs-c.461243A.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1378C>T<a name=\"v3-hgvs-c.461378C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1528 G>C<a name=\"v3-hgvs-c.461528G.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1558C>T<a name=\"v3-hgvs-c.461558C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1559C>T<a name=\"v3-hgvs-c.461559C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.158G>T<a name=\"v3-hgvs-c.46158G.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1640A>G<a name=\"v3-hgvs-c.461640A.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1720C>T<a name=\"v3-hgvs-c.461720C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1823T>G<a name=\"v3-hgvs-c.461823T.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2056+1G>T<a name=\"v3-hgvs-c.462056.431G.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2159 A>T<a name=\"v3-hgvs-c.462159A.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.223delG<a name=\"v3-hgvs-c.46223delG\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2258C>G<a name=\"v3-hgvs-c.462258C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.226C>T<a name=\"v3-hgvs-c.46226C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2303C>T<a name=\"v3-hgvs-c.462303C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2332G>A<a name=\"v3-hgvs-c.462332G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2405G>T<a name=\"v3-hgvs-c.462405G.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2471T>C<a name=\"v3-hgvs-c.462471T.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2539_2541del<a name=\"v3-hgvs-c.462539_2541del\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.257 G>A<a name=\"v3-hgvs-c.46257G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.265T>A<a name=\"v3-hgvs-c.46265T.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2662G>A<a name=\"v3-hgvs-c.462662G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2674C>A<a name=\"v3-hgvs-c.462674C.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.26_28delAGC<a name=\"v3-hgvs-c.4626_28delAGC\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.296 C>T<a name=\"v3-hgvs-c.46296C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.314delA<a name=\"v3-hgvs-c.46314delA\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.320del<a name=\"v3-hgvs-c.46320del\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.3478G>A<a name=\"v3-hgvs-c.463478G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.349 C>T<a name=\"v3-hgvs-c.46349C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.350delC<a name=\"v3-hgvs-c.46350delC\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.4009 G>A<a name=\"v3-hgvs-c.464009G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.416T>G<a name=\"v3-hgvs-c.46416T.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.441_457del<a name=\"v3-hgvs-c.46441_457del\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.448 C>G<a name=\"v3-hgvs-c.46448C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.481C>G<a name=\"v3-hgvs-c.46481C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5 A>G<a name=\"v3-hgvs-c.465A.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5294G>A<a name=\"v3-hgvs-c.465294G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5375C>T<a name=\"v3-hgvs-c.465375C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5380C>T<a name=\"v3-hgvs-c.465380C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5549C>G<a name=\"v3-hgvs-c.465549C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5693 G>A<a name=\"v3-hgvs-c.465693G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.619 G>A<a name=\"v3-hgvs-c.46619G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.685+1G>C<a name=\"v3-hgvs-c.46685.431G.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.7003C>T<a name=\"v3-hgvs-c.467003C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.700C>A<a name=\"v3-hgvs-c.46700C.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.716C>G<a name=\"v3-hgvs-c.46716C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.760 C>A<a name=\"v3-hgvs-c.46760C.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.7955G>A<a name=\"v3-hgvs-c.467955G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.7975C>T<a name=\"v3-hgvs-c.467975C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.8056C>G<a name=\"v3-hgvs-c.468056C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.851G>C<a name=\"v3-hgvs-c.46851G.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.863_864insACCT<a name=\"v3-hgvs-c.46863_864insACCT\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.868G>A<a name=\"v3-hgvs-c.46868G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.931C>T<a name=\"v3-hgvs-c.46931C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.9552G>A<a name=\"v3-hgvs-c.469552G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.959C>T<a name=\"v3-hgvs-c.46959C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.[711G>T;712C>A]<a name=\"v3-hgvs-c.46.91711G.62T.59712C.62A.93\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Arg2659Trp)<a name=\"v3-hgvs-p.46.40Arg2659Trp.41\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Gln9del)<a name=\"v3-hgvs-p.46.40Gln9del.41\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Leu3428Arg)<a name=\"v3-hgvs-p.46.40Leu3428Arg.41\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Met3184Ile)<a name=\"v3-hgvs-p.46.40Met3184Ile.41\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Pro460Ser)<a name=\"v3-hgvs-p.46.40Pro460Ser.41\"> </a></td></tr></table></div>" - ]; - fhir:CodeSystem.url [ fhir:value "http://varnomen.hgvs.org"]; + ]; # + fhir:CodeSystem.url [ fhir:value "http://varnomen.hgvs.org"]; # fhir:CodeSystem.identifier [ fhir:index 0; fhir:Identifier.system [ fhir:value "urn:ietf:rfc:3986" ]; fhir:Identifier.value [ fhir:value "urn:oid:2.16.840.1.113883.6.282" ] - ]; - fhir:CodeSystem.version [ fhir:value "0.2.0"]; - fhir:CodeSystem.name [ fhir:value "Hgvs"]; - fhir:CodeSystem.title [ fhir:value "Human Genome Variation Society nomenclature"]; - fhir:CodeSystem.status [ fhir:value "active"]; - fhir:CodeSystem.experimental [ fhir:value "false"^^xsd:boolean]; - fhir:CodeSystem.date [ fhir:value "2019-03-20T00:00:00-04:00"^^xsd:dateTime]; - fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:CodeSystem.version [ fhir:value "0.2.0"]; # + fhir:CodeSystem.name [ fhir:value "Hgvs"]; # + fhir:CodeSystem.title [ fhir:value "Human Genome Variation Society nomenclature"]; # + fhir:CodeSystem.status [ fhir:value "active"]; # + fhir:CodeSystem.experimental [ fhir:value "false"^^xsd:boolean]; # + fhir:CodeSystem.date [ fhir:value "2019-03-20T00:00:00-04:00"^^xsd:dateTime]; # + fhir:CodeSystem.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:CodeSystem.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -42,10 +42,10 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:CodeSystem.description [ fhir:value "HGVS nomenclatures are the guidelines for mutation nomenclature made by the Human Genome Variation Society.\n\nHGVS nomenclature can be used with the HL7 coded data type (code data type that accepts expression data, or a coded expression data type). This coded data type should be able to distinguish expressions in HGVS nomenclature from coded concepts. For example, in the HL7 messages specified according to the HL7 V2 Clinical Genomics Fully LOINC-Qualified Genetic Variation Model, HGVS nomenclature can be used to as the observation values for DNA sequence variations. For example, OBX|1|CWE|48004-6^DNA Sequence Variation^LN||c.1129C>T^^HGVS|\n\nVersioning information: The HGVS nomenclature for the description of sequence variants was last modified Feb 20, 2008. The HGVS nomenclature for the description of protein sequence variants was last modified May 12, 2007. The HGVS nomenclature for the description of DNA sequence variants was last modified June 15, 2007 The HGVS nomenclature for the description of RNA sequence variants was last modified May 12, 2007\n\nHGVS nomenclatures can be used freely by the public."]; - fhir:CodeSystem.content [ fhir:value "complete"]; - fhir:CodeSystem.count [ fhir:value "68"^^xsd:nonNegativeInteger]; + ]; # + fhir:CodeSystem.description [ fhir:value "HGVS nomenclatures are the guidelines for mutation nomenclature made by the Human Genome Variation Society.\n\nHGVS nomenclature can be used with the HL7 coded data type (code data type that accepts expression data, or a coded expression data type). This coded data type should be able to distinguish expressions in HGVS nomenclature from coded concepts. For example, in the HL7 messages specified according to the HL7 V2 Clinical Genomics Fully LOINC-Qualified Genetic Variation Model, HGVS nomenclature can be used to as the observation values for DNA sequence variations. For example, OBX|1|CWE|48004-6^DNA Sequence Variation^LN||c.1129C>T^^HGVS|\n\nVersioning information: The HGVS nomenclature for the description of sequence variants was last modified Feb 20, 2008. The HGVS nomenclature for the description of protein sequence variants was last modified May 12, 2007. The HGVS nomenclature for the description of DNA sequence variants was last modified June 15, 2007 The HGVS nomenclature for the description of RNA sequence variants was last modified May 12, 2007\n\nHGVS nomenclatures can be used freely by the public."]; # + fhir:CodeSystem.content [ fhir:value "complete"]; # + fhir:CodeSystem.count [ fhir:value "68"^^xsd:nonNegativeInteger]; # fhir:CodeSystem.concept [ fhir:index 0; fhir:CodeSystem.concept.code [ fhir:value "c.10283T>G" ]; @@ -318,7 +318,7 @@ fhir:index 67; fhir:CodeSystem.concept.code [ fhir:value "p.(Pro460Ser)" ]; fhir:CodeSystem.concept.display [ fhir:value "p.(Pro460Ser)" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/CodeSystem-v3-hgvs.ttl.html b/CodeSystem-v3-hgvs.ttl.html index 644f4337..80d2cc4c 100644 --- a/CodeSystem-v3-hgvs.ttl.html +++ b/CodeSystem-v3-hgvs.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -294,24 +294,24 @@ <h2 id="root">: Human Genome Variation Society nomenclature - TTL Representation a fhir:CodeSystem; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "v3-hgvs"]; + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "v3-hgvs"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://varnomen.hgvs.org</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td></tr><tr><td style=\"white-space:nowrap\">c.10283T&gt;G<a name=\"v3-hgvs-c.4610283T.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1090delA<a name=\"v3-hgvs-c.461090delA\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1100 G&gt;T<a name=\"v3-hgvs-c.461100G.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1130G&gt;A<a name=\"v3-hgvs-c.461130G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.11521C&gt;G<a name=\"v3-hgvs-c.4611521C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1152_1170del<a name=\"v3-hgvs-c.461152_1170del\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1243A&gt;C<a name=\"v3-hgvs-c.461243A.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1378C&gt;T<a name=\"v3-hgvs-c.461378C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1528 G&gt;C<a name=\"v3-hgvs-c.461528G.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1558C&gt;T<a name=\"v3-hgvs-c.461558C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1559C&gt;T<a name=\"v3-hgvs-c.461559C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.158G&gt;T<a name=\"v3-hgvs-c.46158G.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1640A&gt;G<a name=\"v3-hgvs-c.461640A.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1720C&gt;T<a name=\"v3-hgvs-c.461720C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.1823T&gt;G<a name=\"v3-hgvs-c.461823T.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2056+1G&gt;T<a name=\"v3-hgvs-c.462056.431G.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2159 A&gt;T<a name=\"v3-hgvs-c.462159A.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.223delG<a name=\"v3-hgvs-c.46223delG\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2258C&gt;G<a name=\"v3-hgvs-c.462258C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.226C&gt;T<a name=\"v3-hgvs-c.46226C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2303C&gt;T<a name=\"v3-hgvs-c.462303C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2332G&gt;A<a name=\"v3-hgvs-c.462332G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2405G&gt;T<a name=\"v3-hgvs-c.462405G.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2471T&gt;C<a name=\"v3-hgvs-c.462471T.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2539_2541del<a name=\"v3-hgvs-c.462539_2541del\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.257 G&gt;A<a name=\"v3-hgvs-c.46257G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.265T&gt;A<a name=\"v3-hgvs-c.46265T.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2662G&gt;A<a name=\"v3-hgvs-c.462662G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.2674C&gt;A<a name=\"v3-hgvs-c.462674C.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.26_28delAGC<a name=\"v3-hgvs-c.4626_28delAGC\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.296 C&gt;T<a name=\"v3-hgvs-c.46296C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.314delA<a name=\"v3-hgvs-c.46314delA\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.320del<a name=\"v3-hgvs-c.46320del\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.3478G&gt;A<a name=\"v3-hgvs-c.463478G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.349 C&gt;T<a name=\"v3-hgvs-c.46349C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.350delC<a name=\"v3-hgvs-c.46350delC\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.4009 G&gt;A<a name=\"v3-hgvs-c.464009G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.416T&gt;G<a name=\"v3-hgvs-c.46416T.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.441_457del<a name=\"v3-hgvs-c.46441_457del\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.448 C&gt;G<a name=\"v3-hgvs-c.46448C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.481C&gt;G<a name=\"v3-hgvs-c.46481C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5 A&gt;G<a name=\"v3-hgvs-c.465A.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5294G&gt;A<a name=\"v3-hgvs-c.465294G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5375C&gt;T<a name=\"v3-hgvs-c.465375C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5380C&gt;T<a name=\"v3-hgvs-c.465380C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5549C&gt;G<a name=\"v3-hgvs-c.465549C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.5693 G&gt;A<a name=\"v3-hgvs-c.465693G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.619 G&gt;A<a name=\"v3-hgvs-c.46619G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.685+1G&gt;C<a name=\"v3-hgvs-c.46685.431G.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.7003C&gt;T<a name=\"v3-hgvs-c.467003C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.700C&gt;A<a name=\"v3-hgvs-c.46700C.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.716C&gt;G<a name=\"v3-hgvs-c.46716C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.760 C&gt;A<a name=\"v3-hgvs-c.46760C.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.7955G&gt;A<a name=\"v3-hgvs-c.467955G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.7975C&gt;T<a name=\"v3-hgvs-c.467975C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.8056C&gt;G<a name=\"v3-hgvs-c.468056C.62G\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.851G&gt;C<a name=\"v3-hgvs-c.46851G.62C\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.863_864insACCT<a name=\"v3-hgvs-c.46863_864insACCT\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.868G&gt;A<a name=\"v3-hgvs-c.46868G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.931C&gt;T<a name=\"v3-hgvs-c.46931C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.9552G&gt;A<a name=\"v3-hgvs-c.469552G.62A\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.959C&gt;T<a name=\"v3-hgvs-c.46959C.62T\"> </a></td></tr><tr><td style=\"white-space:nowrap\">c.[711G&gt;T;712C&gt;A]<a name=\"v3-hgvs-c.46.91711G.62T.59712C.62A.93\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Arg2659Trp)<a name=\"v3-hgvs-p.46.40Arg2659Trp.41\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Gln9del)<a name=\"v3-hgvs-p.46.40Gln9del.41\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Leu3428Arg)<a name=\"v3-hgvs-p.46.40Leu3428Arg.41\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Met3184Ile)<a name=\"v3-hgvs-p.46.40Met3184Ile.41\"> </a></td></tr><tr><td style=\"white-space:nowrap\">p.(Pro460Ser)<a name=\"v3-hgvs-p.46.40Pro460Ser.41\"> </a></td></tr></table></div>" - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://varnomen.hgvs.org"]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.url">fhir:CodeSystem.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://varnomen.hgvs.org"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.identifier">fhir:CodeSystem.identifier</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Identifier#Identifier.system">fhir:Identifier.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "urn:ietf:rfc:3986" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Identifier#Identifier.value">fhir:Identifier.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "urn:oid:2.16.840.1.113883.6.282" ] - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Hgvs"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Human Genome Variation Society nomenclature"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">fhir:CodeSystem.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2019-03-20T00:00:00-04:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.version">fhir:CodeSystem.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.name">fhir:CodeSystem.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Hgvs"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.title">fhir:CodeSystem.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Human Genome Variation Society nomenclature"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.status">fhir:CodeSystem.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.experimental">fhir:CodeSystem.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.date">fhir:CodeSystem.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2019-03-20T00:00:00-04:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.publisher">fhir:CodeSystem.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.contact">fhir:CodeSystem.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -327,10 +327,10 @@ <h2 id="root">: Human Genome Variation Society nomenclature - TTL Representation <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "HGVS nomenclatures are the guidelines for mutation nomenclature made by the Human Genome Variation Society.\n\nHGVS nomenclature can be used with the HL7 coded data type (code data type that accepts expression data, or a coded expression data type). This coded data type should be able to distinguish expressions in HGVS nomenclature from coded concepts. For example, in the HL7 messages specified according to the HL7 V2 Clinical Genomics Fully LOINC-Qualified Genetic Variation Model, HGVS nomenclature can be used to as the observation values for DNA sequence variations. For example, OBX|1|CWE|48004-6^DNA Sequence Variation^LN||c.1129C>T^^HGVS|\n\nVersioning information: The HGVS nomenclature for the description of sequence variants was last modified Feb 20, 2008. The HGVS nomenclature for the description of protein sequence variants was last modified May 12, 2007. The HGVS nomenclature for the description of DNA sequence variants was last modified June 15, 2007 The HGVS nomenclature for the description of RNA sequence variants was last modified May 12, 2007\n\nHGVS nomenclatures can be used freely by the public."]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "complete"]; - <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.count">fhir:CodeSystem.count</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "68"^^xsd:nonNegativeInteger]; + ]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.description">fhir:CodeSystem.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "HGVS nomenclatures are the guidelines for mutation nomenclature made by the Human Genome Variation Society.\n\nHGVS nomenclature can be used with the HL7 coded data type (code data type that accepts expression data, or a coded expression data type). This coded data type should be able to distinguish expressions in HGVS nomenclature from coded concepts. For example, in the HL7 messages specified according to the HL7 V2 Clinical Genomics Fully LOINC-Qualified Genetic Variation Model, HGVS nomenclature can be used to as the observation values for DNA sequence variations. For example, OBX|1|CWE|48004-6^DNA Sequence Variation^LN||c.1129C>T^^HGVS|\n\nVersioning information: The HGVS nomenclature for the description of sequence variants was last modified Feb 20, 2008. The HGVS nomenclature for the description of protein sequence variants was last modified May 12, 2007. The HGVS nomenclature for the description of DNA sequence variants was last modified June 15, 2007 The HGVS nomenclature for the description of RNA sequence variants was last modified May 12, 2007\n\nHGVS nomenclatures can be used freely by the public."]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.content">fhir:CodeSystem.content</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "complete"]; # + <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.count">fhir:CodeSystem.count</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "68"^^xsd:nonNegativeInteger]; # <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept">fhir:CodeSystem.concept</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "c.10283T>G" ]; @@ -603,7 +603,7 @@ <h2 id="root">: Human Genome Variation Society nomenclature - TTL Representation <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 67; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.code">fhir:CodeSystem.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "p.(Pro460Ser)" ]; <a href="http://hl7.org/fhir/R4/codesystem.html#CodeSystem.concept.display">fhir:CodeSystem.concept.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "p.(Pro460Ser)" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -641,7 +641,7 @@ <h2 id="root">: Human Genome Variation Society nomenclature - TTL Representation <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/CodeSystem-v3-hgvs.xlsx b/CodeSystem-v3-hgvs.xlsx index 3eb00fd6..ad6bc4ed 100644 Binary files a/CodeSystem-v3-hgvs.xlsx and b/CodeSystem-v3-hgvs.xlsx differ diff --git a/CodeSystem-v3-hgvs.xml.html b/CodeSystem-v3-hgvs.xml.html index 834be143..eb2824eb 100644 --- a/CodeSystem-v3-hgvs.xml.html +++ b/CodeSystem-v3-hgvs.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -631,7 +631,7 @@ <h2 id="root">: Human Genome Variation Society nomenclature - XML Representation <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ConceptMap-example-study-data-dictionary-conceptmap-1-testing.html b/ConceptMap-example-study-data-dictionary-conceptmap-1-testing.html index 0e4f69ba..78cbd700 100644 --- a/ConceptMap-example-study-data-dictionary-conceptmap-1-testing.html +++ b/ConceptMap-example-study-data-dictionary-conceptmap-1-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">ConceptMap: Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">ConceptMap: <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ConceptMap-example-study-data-dictionary-conceptmap-1.change.history.html b/ConceptMap-example-study-data-dictionary-conceptmap-1.change.history.html index 1df69e3d..d36517c1 100644 --- a/ConceptMap-example-study-data-dictionary-conceptmap-1.change.history.html +++ b/ConceptMap-example-study-data-dictionary-conceptmap-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ConceptMap/example-study-data-dictionary-conceptmap-1 - Change H <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ConceptMap-example-study-data-dictionary-conceptmap-1.html b/ConceptMap-example-study-data-dictionary-conceptmap-1.html index 8a752315..15dda958 100644 --- a/ConceptMap-example-study-data-dictionary-conceptmap-1.html +++ b/ConceptMap-example-study-data-dictionary-conceptmap-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">Example ConceptMap: Concept Map showing representing harmonization Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -283,7 +283,7 @@ <h2 id="root">Example ConceptMap: Concept Map showing representing harmonization - <div xmlns="http://www.w3.org/1999/xhtml"><h2>null (http://example.org/my-dataset/fhir/conceptmap/data-to-public)</h2><p>Mapping from <a href="ValueSet-datatable-valueset-1.html">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1</a> to <a href="ValueSet-datatable-mappings-valueset-1.html">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1</a></p><p>ACTIVE. Published on 2022-11-28 09:07:57+0000 by NCPI FHIR Working Group (NCPI FHIR Working Group: <a href="https://github.com/nih-ncpi">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href="mailto:meenchul@d3b.center">meenchul@d3b.center</a>). </p><br/><p><b>Group 1</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <code>https://uts.nlm.nih.gov/uts/umls</code></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>subjectid (Subject's Unique Identifier)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C2348584 (Subject Unique Identifier)</td></tr><tr><td>gender</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C0079399 (Gender)</td></tr><tr><td>age_at_enrollment (Subject's Age at Enrollment in days)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C168843 (Age in Days at Enrollment)</td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider" title="wider">maps to wider concept</a></td><td>C1305855 (Body mass index)</td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C0872128 (case control)</td></tr></table><hr/><p><b>Group 2</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <a href="http://terminology.hl7.org/5.0.0/CodeSystem-v3-loinc.html">Logical Observation Identifiers, Names and Codes (LOINC)</a></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider" title="wider">maps to wider concept</a></td><td>LP35925-4 (Body mass index (BMI))</td></tr></table><hr/><p><b>Group 3</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <a href="CodeSystem-hpo.html">Human Phenotype Ontology</a></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>HP:0010772 (Anomalous pulmonary venous return)</td></tr></table><hr/><p><b>Group 4</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <a href="CodeSystem-mondo.html">Mondo Disease Ontology</a></p><table class="grid"><tr><td colspan="2"><b>Source Concept Details</b></td><td><b>Relationship</b></td><td colspan="2"><b>Target Concept Details</b></td></tr><tr><td colspan="2"><b>Codes</b> from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1">Datatable CodeSystem (lists all variables)</a></td><td/><td colspan="2"><b>Codes</b> from <a href="CodeSystem-mondo.html" title="http://purl.obolibrary.org/obo/mondo.owl">Mondo Disease Ontology</a></td></tr><tr><td style="border-right-width: 0px; border-bottom-style: none">status</td><td style="border-left-width: 0px; border-bottom-style: none">Subject's status (Case or Control)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td style="border-right-width: 0px">MONDO:0017705</td><td style="border-left-width: 0px">congenital pulmonary venous return anomaly</td></tr><tr><td style="border-right-width: 0px; border-top-style: none"/><td style="border-top-style: none; border-left-width: 0px"/><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td style="border-right-width: 0px">MONDO:0007130</td><td style="border-left-width: 0px">congenital total pulmonary venous return anomaly</td></tr></table></div> + <div xmlns="http://www.w3.org/1999/xhtml"><h2>null (http://example.org/my-dataset/fhir/conceptmap/data-to-public)</h2><p>Mapping from <a href="ValueSet-datatable-valueset-1.html">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1</a> to <a href="ValueSet-datatable-mappings-valueset-1.html">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1</a></p><p>ACTIVE. Published on 2022-12-09 17:30:30+0000 by NCPI FHIR Working Group (NCPI FHIR Working Group: <a href="https://github.com/nih-ncpi">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href="mailto:meenchul@d3b.center">meenchul@d3b.center</a>). </p><br/><p><b>Group 1</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <code>https://uts.nlm.nih.gov/uts/umls</code></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>subjectid (Subject's Unique Identifier)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C2348584 (Subject Unique Identifier)</td></tr><tr><td>gender</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C0079399 (Gender)</td></tr><tr><td>age_at_enrollment (Subject's Age at Enrollment in days)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C168843 (Age in Days at Enrollment)</td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider" title="wider">maps to wider concept</a></td><td>C1305855 (Body mass index)</td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C0872128 (case control)</td></tr></table><hr/><p><b>Group 2</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <a href="http://terminology.hl7.org/5.0.0/CodeSystem-v3-loinc.html">Logical Observation Identifiers, Names and Codes (LOINC)</a></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider" title="wider">maps to wider concept</a></td><td>LP35925-4 (Body mass index (BMI))</td></tr></table><hr/><p><b>Group 3</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <a href="CodeSystem-hpo.html">Human Phenotype Ontology</a></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>HP:0010772 (Anomalous pulmonary venous return)</td></tr></table><hr/><p><b>Group 4</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <a href="CodeSystem-mondo.html">Mondo Disease Ontology</a></p><table class="grid"><tr><td colspan="2"><b>Source Concept Details</b></td><td><b>Relationship</b></td><td colspan="2"><b>Target Concept Details</b></td></tr><tr><td colspan="2"><b>Codes</b> from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1">Datatable CodeSystem (lists all variables)</a></td><td/><td colspan="2"><b>Codes</b> from <a href="CodeSystem-mondo.html" title="http://purl.obolibrary.org/obo/mondo.owl">Mondo Disease Ontology</a></td></tr><tr><td style="border-right-width: 0px; border-bottom-style: none">status</td><td style="border-left-width: 0px; border-bottom-style: none">Subject's status (Case or Control)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td style="border-right-width: 0px">MONDO:0017705</td><td style="border-left-width: 0px">congenital pulmonary venous return anomaly</td></tr><tr><td style="border-right-width: 0px; border-top-style: none"/><td style="border-top-style: none; border-left-width: 0px"/><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td style="border-right-width: 0px">MONDO:0007130</td><td style="border-left-width: 0px">congenital total pulmonary venous return anomaly</td></tr></table></div> @@ -314,7 +314,7 @@ <h2 id="root">Example ConceptMap: Concept Map showing representing harmonization <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ConceptMap-example-study-data-dictionary-conceptmap-1.json b/ConceptMap-example-study-data-dictionary-conceptmap-1.json index cffa7db2..9e530d80 100644 --- a/ConceptMap-example-study-data-dictionary-conceptmap-1.json +++ b/ConceptMap-example-study-data-dictionary-conceptmap-1.json @@ -1,161 +1,127 @@ -{ - "resourceType": "ConceptMap", - "id": "example-study-data-dictionary-conceptmap-1", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-harmony" - ] - }, - "text": { - "status": "extensions", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><h2>null (http://example.org/my-dataset/fhir/conceptmap/data-to-public)</h2><p>Mapping from <a href=\"ValueSet-datatable-valueset-1.html\">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1</a> to <a href=\"ValueSet-datatable-mappings-valueset-1.html\">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1</a></p><p>ACTIVE. Published on 2022-11-28 09:07:57+0000 by NCPI FHIR Working Group (NCPI FHIR Working Group: <a href=\"https://github.com/nih-ncpi\">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href=\"mailto:meenchul@d3b.center\">meenchul@d3b.center</a>). </p><br/><p><b>Group 1</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <code>https://uts.nlm.nih.gov/uts/umls</code></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>subjectid (Subject's Unique Identifier)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C2348584 (Subject Unique Identifier)</td></tr><tr><td>gender</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C0079399 (Gender)</td></tr><tr><td>age_at_enrollment (Subject's Age at Enrollment in days)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C168843 (Age in Days at Enrollment)</td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>C1305855 (Body mass index)</td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C0872128 (case control)</td></tr></table><hr/><p><b>Group 2</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-loinc.html\">Logical Observation Identifiers, Names and Codes (LOINC)</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>LP35925-4 (Body mass index (BMI))</td></tr></table><hr/><p><b>Group 3</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"CodeSystem-hpo.html\">Human Phenotype Ontology</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>HP:0010772 (Anomalous pulmonary venous return)</td></tr></table><hr/><p><b>Group 4</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"CodeSystem-mondo.html\">Mondo Disease Ontology</a></p><table class=\"grid\"><tr><td colspan=\"2\"><b>Source Concept Details</b></td><td><b>Relationship</b></td><td colspan=\"2\"><b>Target Concept Details</b></td></tr><tr><td colspan=\"2\"><b>Codes</b> from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\" title=\"https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1\">Datatable CodeSystem (lists all variables)</a></td><td/><td colspan=\"2\"><b>Codes</b> from <a href=\"CodeSystem-mondo.html\" title=\"http://purl.obolibrary.org/obo/mondo.owl\">Mondo Disease Ontology</a></td></tr><tr><td style=\"border-right-width: 0px; border-bottom-style: none\">status</td><td style=\"border-left-width: 0px; border-bottom-style: none\">Subject's status (Case or Control)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td style=\"border-right-width: 0px\">MONDO:0017705</td><td style=\"border-left-width: 0px\">congenital pulmonary venous return anomaly</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none\"/><td style=\"border-top-style: none; border-left-width: 0px\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td style=\"border-right-width: 0px\">MONDO:0007130</td><td style=\"border-left-width: 0px\">congenital total pulmonary venous return anomaly</td></tr></table></div>" - }, - "url": "http://example.org/my-dataset/fhir/conceptmap/data-to-public", - "version": "0.2.0", - "status": "active", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "purpose": "Represent transformations to public codes applied during data ingestion", - "sourceUri": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1", - "targetUri": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1", - "group": [ - { - "source": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "target": "https://uts.nlm.nih.gov/uts/umls", - "element": [ - { - "code": "subjectid", - "display": "Subject's Unique Identifier", - "target": [ - { - "code": "C2348584", - "display": "Subject Unique Identifier", - "equivalence": "equivalent" - } - ] - }, - { - "code": "gender", - "display": "Gender", - "target": [ - { - "code": "C0079399", - "display": "Gender", - "equivalence": "equivalent" - } - ] - }, - { - "code": "age_at_enrollment", - "display": "Subject's Age at Enrollment in days", - "target": [ - { - "code": "C168843", - "display": "Age in Days at Enrollment", - "equivalence": "equivalent" - } - ] - }, - { - "code": "bmi", - "display": "Subject's BMI, Measured at Enrollment", - "target": [ - { - "code": "C1305855", - "display": "Body mass index", - "equivalence": "wider" - } - ] - }, - { - "code": "status", - "display": "Subject's status (Case or Control)", - "target": [ - { - "code": "C0872128", - "display": "case control", - "equivalence": "equivalent" - } - ] - } - ] - }, - { - "source": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "target": "http://loinc.org", - "element": [ - { - "code": "bmi", - "display": "Subject's BMI, Measured at Enrollment", - "target": [ - { - "code": "LP35925-4", - "display": "Body mass index (BMI)", - "equivalence": "wider" - } - ] - } - ] - }, - { - "source": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "target": "http://purl.obolibrary.org/obo/hp.owl", - "element": [ - { - "code": "status", - "display": "Subject's status (Case or Control)", - "target": [ - { - "code": "HP:0010772", - "display": "Anomalous pulmonary venous return", - "equivalence": "equivalent" - } - ] - } - ] - }, - { - "source": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "target": "http://purl.obolibrary.org/obo/mondo.owl", - "element": [ - { - "code": "status", - "display": "Subject's status (Case or Control)", - "target": [ - { - "code": "MONDO:0017705", - "display": "congenital pulmonary venous return anomaly", - "equivalence": "equivalent" - }, - { - "code": "MONDO:0007130", - "display": "congenital total pulmonary venous return anomaly", - "equivalence": "equivalent" - } - ] - } - ] - } - ] +{ + "resourceType" : "ConceptMap", + "id" : "example-study-data-dictionary-conceptmap-1", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-harmony"] + }, + "text" : { + "status" : "extensions", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><h2>null (http://example.org/my-dataset/fhir/conceptmap/data-to-public)</h2><p>Mapping from <a href=\"ValueSet-datatable-valueset-1.html\">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1</a> to <a href=\"ValueSet-datatable-mappings-valueset-1.html\">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1</a></p><p>ACTIVE. Published on 2022-12-09 17:30:30+0000 by NCPI FHIR Working Group (NCPI FHIR Working Group: <a href=\"https://github.com/nih-ncpi\">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href=\"mailto:meenchul@d3b.center\">meenchul@d3b.center</a>). </p><br/><p><b>Group 1</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <code>https://uts.nlm.nih.gov/uts/umls</code></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>subjectid (Subject's Unique Identifier)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C2348584 (Subject Unique Identifier)</td></tr><tr><td>gender</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C0079399 (Gender)</td></tr><tr><td>age_at_enrollment (Subject's Age at Enrollment in days)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C168843 (Age in Days at Enrollment)</td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>C1305855 (Body mass index)</td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C0872128 (case control)</td></tr></table><hr/><p><b>Group 2</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-loinc.html\">Logical Observation Identifiers, Names and Codes (LOINC)</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>LP35925-4 (Body mass index (BMI))</td></tr></table><hr/><p><b>Group 3</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"CodeSystem-hpo.html\">Human Phenotype Ontology</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>HP:0010772 (Anomalous pulmonary venous return)</td></tr></table><hr/><p><b>Group 4</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"CodeSystem-mondo.html\">Mondo Disease Ontology</a></p><table class=\"grid\"><tr><td colspan=\"2\"><b>Source Concept Details</b></td><td><b>Relationship</b></td><td colspan=\"2\"><b>Target Concept Details</b></td></tr><tr><td colspan=\"2\"><b>Codes</b> from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\" title=\"https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1\">Datatable CodeSystem (lists all variables)</a></td><td/><td colspan=\"2\"><b>Codes</b> from <a href=\"CodeSystem-mondo.html\" title=\"http://purl.obolibrary.org/obo/mondo.owl\">Mondo Disease Ontology</a></td></tr><tr><td style=\"border-right-width: 0px; border-bottom-style: none\">status</td><td style=\"border-left-width: 0px; border-bottom-style: none\">Subject's status (Case or Control)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td style=\"border-right-width: 0px\">MONDO:0017705</td><td style=\"border-left-width: 0px\">congenital pulmonary venous return anomaly</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none\"/><td style=\"border-top-style: none; border-left-width: 0px\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td style=\"border-right-width: 0px\">MONDO:0007130</td><td style=\"border-left-width: 0px\">congenital total pulmonary venous return anomaly</td></tr></table></div>" + }, + "url" : "http://example.org/my-dataset/fhir/conceptmap/data-to-public", + "version" : "0.2.0", + "status" : "active", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "purpose" : "Represent transformations to public codes applied during data ingestion", + "sourceUri" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1", + "targetUri" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1", + "group" : [{ + "source" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "target" : "https://uts.nlm.nih.gov/uts/umls", + "element" : [{ + "code" : "subjectid", + "display" : "Subject's Unique Identifier", + "target" : [{ + "code" : "C2348584", + "display" : "Subject Unique Identifier", + "equivalence" : "equivalent" + }] + }, + { + "code" : "gender", + "display" : "Gender", + "target" : [{ + "code" : "C0079399", + "display" : "Gender", + "equivalence" : "equivalent" + }] + }, + { + "code" : "age_at_enrollment", + "display" : "Subject's Age at Enrollment in days", + "target" : [{ + "code" : "C168843", + "display" : "Age in Days at Enrollment", + "equivalence" : "equivalent" + }] + }, + { + "code" : "bmi", + "display" : "Subject's BMI, Measured at Enrollment", + "target" : [{ + "code" : "C1305855", + "display" : "Body mass index", + "equivalence" : "wider" + }] + }, + { + "code" : "status", + "display" : "Subject's status (Case or Control)", + "target" : [{ + "code" : "C0872128", + "display" : "case control", + "equivalence" : "equivalent" + }] + }] + }, + { + "source" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "target" : "http://loinc.org", + "element" : [{ + "code" : "bmi", + "display" : "Subject's BMI, Measured at Enrollment", + "target" : [{ + "code" : "LP35925-4", + "display" : "Body mass index (BMI)", + "equivalence" : "wider" + }] + }] + }, + { + "source" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "target" : "http://purl.obolibrary.org/obo/hp.owl", + "element" : [{ + "code" : "status", + "display" : "Subject's status (Case or Control)", + "target" : [{ + "code" : "HP:0010772", + "display" : "Anomalous pulmonary venous return", + "equivalence" : "equivalent" + }] + }] + }, + { + "source" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "target" : "http://purl.obolibrary.org/obo/mondo.owl", + "element" : [{ + "code" : "status", + "display" : "Subject's status (Case or Control)", + "target" : [{ + "code" : "MONDO:0017705", + "display" : "congenital pulmonary venous return anomaly", + "equivalence" : "equivalent" + }, + { + "code" : "MONDO:0007130", + "display" : "congenital total pulmonary venous return anomaly", + "equivalence" : "equivalent" + }] + }] + }] } \ No newline at end of file diff --git a/ConceptMap-example-study-data-dictionary-conceptmap-1.json.html b/ConceptMap-example-study-data-dictionary-conceptmap-1.json.html index 3781d1d0..a38bc2f2 100644 --- a/ConceptMap-example-study-data-dictionary-conceptmap-1.json.html +++ b/ConceptMap-example-study-data-dictionary-conceptmap-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Concept Map showing representing harmonization mappings - JSON R Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -295,12 +295,12 @@ <h2 id="root">: Concept Map showing representing harmonization mappings - JSON R }, "<a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.text">text</a>" : { "<a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">status</a>" : "extensions", - "<a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.div">div</a>" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><h2>null (http://example.org/my-dataset/fhir/conceptmap/data-to-public)</h2><p>Mapping from <a href=\"ValueSet-datatable-valueset-1.html\">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1</a> to <a href=\"ValueSet-datatable-mappings-valueset-1.html\">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1</a></p><p>ACTIVE. Published on 2022-11-28 09:07:57+0000 by NCPI FHIR Working Group (NCPI FHIR Working Group: <a href=\"https://github.com/nih-ncpi\">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href=\"mailto:meenchul@d3b.center\">meenchul@d3b.center</a>). </p><br/><p><b>Group 1</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <code>https://uts.nlm.nih.gov/uts/umls</code></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>subjectid (Subject's Unique Identifier)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C2348584 (Subject Unique Identifier)</td></tr><tr><td>gender</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C0079399 (Gender)</td></tr><tr><td>age_at_enrollment (Subject's Age at Enrollment in days)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C168843 (Age in Days at Enrollment)</td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>C1305855 (Body mass index)</td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C0872128 (case control)</td></tr></table><hr/><p><b>Group 2</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-loinc.html\">Logical Observation Identifiers, Names and Codes (LOINC)</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>LP35925-4 (Body mass index (BMI))</td></tr></table><hr/><p><b>Group 3</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"CodeSystem-hpo.html\">Human Phenotype Ontology</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>HP:0010772 (Anomalous pulmonary venous return)</td></tr></table><hr/><p><b>Group 4</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"CodeSystem-mondo.html\">Mondo Disease Ontology</a></p><table class=\"grid\"><tr><td colspan=\"2\"><b>Source Concept Details</b></td><td><b>Relationship</b></td><td colspan=\"2\"><b>Target Concept Details</b></td></tr><tr><td colspan=\"2\"><b>Codes</b> from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\" title=\"https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1\">Datatable CodeSystem (lists all variables)</a></td><td/><td colspan=\"2\"><b>Codes</b> from <a href=\"CodeSystem-mondo.html\" title=\"http://purl.obolibrary.org/obo/mondo.owl\">Mondo Disease Ontology</a></td></tr><tr><td style=\"border-right-width: 0px; border-bottom-style: none\">status</td><td style=\"border-left-width: 0px; border-bottom-style: none\">Subject's status (Case or Control)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td style=\"border-right-width: 0px\">MONDO:0017705</td><td style=\"border-left-width: 0px\">congenital pulmonary venous return anomaly</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none\"/><td style=\"border-top-style: none; border-left-width: 0px\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td style=\"border-right-width: 0px\">MONDO:0007130</td><td style=\"border-left-width: 0px\">congenital total pulmonary venous return anomaly</td></tr></table></div>"<a name="end-xhtml"></a> + "<a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.div">div</a>" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><h2>null (http://example.org/my-dataset/fhir/conceptmap/data-to-public)</h2><p>Mapping from <a href=\"ValueSet-datatable-valueset-1.html\">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1</a> to <a href=\"ValueSet-datatable-mappings-valueset-1.html\">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1</a></p><p>ACTIVE. Published on 2022-12-09 17:30:30+0000 by NCPI FHIR Working Group (NCPI FHIR Working Group: <a href=\"https://github.com/nih-ncpi\">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href=\"mailto:meenchul@d3b.center\">meenchul@d3b.center</a>). </p><br/><p><b>Group 1</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <code>https://uts.nlm.nih.gov/uts/umls</code></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>subjectid (Subject's Unique Identifier)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C2348584 (Subject Unique Identifier)</td></tr><tr><td>gender</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C0079399 (Gender)</td></tr><tr><td>age_at_enrollment (Subject's Age at Enrollment in days)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C168843 (Age in Days at Enrollment)</td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>C1305855 (Body mass index)</td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C0872128 (case control)</td></tr></table><hr/><p><b>Group 2</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-loinc.html\">Logical Observation Identifiers, Names and Codes (LOINC)</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>LP35925-4 (Body mass index (BMI))</td></tr></table><hr/><p><b>Group 3</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"CodeSystem-hpo.html\">Human Phenotype Ontology</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>HP:0010772 (Anomalous pulmonary venous return)</td></tr></table><hr/><p><b>Group 4</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"CodeSystem-mondo.html\">Mondo Disease Ontology</a></p><table class=\"grid\"><tr><td colspan=\"2\"><b>Source Concept Details</b></td><td><b>Relationship</b></td><td colspan=\"2\"><b>Target Concept Details</b></td></tr><tr><td colspan=\"2\"><b>Codes</b> from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\" title=\"https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1\">Datatable CodeSystem (lists all variables)</a></td><td/><td colspan=\"2\"><b>Codes</b> from <a href=\"CodeSystem-mondo.html\" title=\"http://purl.obolibrary.org/obo/mondo.owl\">Mondo Disease Ontology</a></td></tr><tr><td style=\"border-right-width: 0px; border-bottom-style: none\">status</td><td style=\"border-left-width: 0px; border-bottom-style: none\">Subject's status (Case or Control)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td style=\"border-right-width: 0px\">MONDO:0017705</td><td style=\"border-left-width: 0px\">congenital pulmonary venous return anomaly</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none\"/><td style=\"border-top-style: none; border-left-width: 0px\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td style=\"border-right-width: 0px\">MONDO:0007130</td><td style=\"border-left-width: 0px\">congenital total pulmonary venous return anomaly</td></tr></table></div>"<a name="end-xhtml"></a> }, "<a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.url">url</a>" : "http://example.org/my-dataset/fhir/conceptmap/data-to-public", "<a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.version">version</a>" : "0.2.0", "<a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.status">status</a>" : "active", - "<a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.contact">contact</a>" : [ { @@ -475,7 +475,7 @@ <h2 id="root">: Concept Map showing representing harmonization mappings - JSON R <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ConceptMap-example-study-data-dictionary-conceptmap-1.ttl b/ConceptMap-example-study-data-dictionary-conceptmap-1.ttl index fb63669c..3e7e1f67 100644 --- a/ConceptMap-example-study-data-dictionary-conceptmap-1.ttl +++ b/ConceptMap-example-study-data-dictionary-conceptmap-1.ttl @@ -7,23 +7,23 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ConceptMap/example-study-data-dictionary-conceptmap-1> a fhir:ConceptMap; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "example-study-data-dictionary-conceptmap-1"]; + fhir:Resource.id [ fhir:value "example-study-data-dictionary-conceptmap-1"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-harmony"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-harmony> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "extensions" ]; - fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><h2>null (http://example.org/my-dataset/fhir/conceptmap/data-to-public)</h2><p>Mapping from <a href=\"ValueSet-datatable-valueset-1.html\">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1</a> to <a href=\"ValueSet-datatable-mappings-valueset-1.html\">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1</a></p><p>ACTIVE. Published on 2022-11-28 09:07:57+0000 by NCPI FHIR Working Group (NCPI FHIR Working Group: <a href=\"https://github.com/nih-ncpi\">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href=\"mailto:meenchul@d3b.center\">meenchul@d3b.center</a>). </p><br/><p><b>Group 1</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <code>https://uts.nlm.nih.gov/uts/umls</code></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>subjectid (Subject's Unique Identifier)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C2348584 (Subject Unique Identifier)</td></tr><tr><td>gender</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C0079399 (Gender)</td></tr><tr><td>age_at_enrollment (Subject's Age at Enrollment in days)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C168843 (Age in Days at Enrollment)</td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>C1305855 (Body mass index)</td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C0872128 (case control)</td></tr></table><hr/><p><b>Group 2</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-loinc.html\">Logical Observation Identifiers, Names and Codes (LOINC)</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>LP35925-4 (Body mass index (BMI))</td></tr></table><hr/><p><b>Group 3</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"CodeSystem-hpo.html\">Human Phenotype Ontology</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>HP:0010772 (Anomalous pulmonary venous return)</td></tr></table><hr/><p><b>Group 4</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"CodeSystem-mondo.html\">Mondo Disease Ontology</a></p><table class=\"grid\"><tr><td colspan=\"2\"><b>Source Concept Details</b></td><td><b>Relationship</b></td><td colspan=\"2\"><b>Target Concept Details</b></td></tr><tr><td colspan=\"2\"><b>Codes</b> from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\" title=\"https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1\">Datatable CodeSystem (lists all variables)</a></td><td/><td colspan=\"2\"><b>Codes</b> from <a href=\"CodeSystem-mondo.html\" title=\"http://purl.obolibrary.org/obo/mondo.owl\">Mondo Disease Ontology</a></td></tr><tr><td style=\"border-right-width: 0px; border-bottom-style: none\">status</td><td style=\"border-left-width: 0px; border-bottom-style: none\">Subject's status (Case or Control)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td style=\"border-right-width: 0px\">MONDO:0017705</td><td style=\"border-left-width: 0px\">congenital pulmonary venous return anomaly</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none\"/><td style=\"border-top-style: none; border-left-width: 0px\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td style=\"border-right-width: 0px\">MONDO:0007130</td><td style=\"border-left-width: 0px\">congenital total pulmonary venous return anomaly</td></tr></table></div>" - ]; - fhir:ConceptMap.url [ fhir:value "http://example.org/my-dataset/fhir/conceptmap/data-to-public"]; - fhir:ConceptMap.version [ fhir:value "0.2.0"]; - fhir:ConceptMap.status [ fhir:value "active"]; - fhir:ConceptMap.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:ConceptMap.publisher [ fhir:value "NCPI FHIR Working Group"]; + fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><h2>null (http://example.org/my-dataset/fhir/conceptmap/data-to-public)</h2><p>Mapping from <a href=\"ValueSet-datatable-valueset-1.html\">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1</a> to <a href=\"ValueSet-datatable-mappings-valueset-1.html\">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1</a></p><p>ACTIVE. Published on 2022-12-09 17:30:30+0000 by NCPI FHIR Working Group (NCPI FHIR Working Group: <a href=\"https://github.com/nih-ncpi\">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href=\"mailto:meenchul@d3b.center\">meenchul@d3b.center</a>). </p><br/><p><b>Group 1</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <code>https://uts.nlm.nih.gov/uts/umls</code></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>subjectid (Subject's Unique Identifier)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C2348584 (Subject Unique Identifier)</td></tr><tr><td>gender</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C0079399 (Gender)</td></tr><tr><td>age_at_enrollment (Subject's Age at Enrollment in days)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C168843 (Age in Days at Enrollment)</td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>C1305855 (Body mass index)</td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C0872128 (case control)</td></tr></table><hr/><p><b>Group 2</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-loinc.html\">Logical Observation Identifiers, Names and Codes (LOINC)</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>LP35925-4 (Body mass index (BMI))</td></tr></table><hr/><p><b>Group 3</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"CodeSystem-hpo.html\">Human Phenotype Ontology</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>HP:0010772 (Anomalous pulmonary venous return)</td></tr></table><hr/><p><b>Group 4</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"CodeSystem-mondo.html\">Mondo Disease Ontology</a></p><table class=\"grid\"><tr><td colspan=\"2\"><b>Source Concept Details</b></td><td><b>Relationship</b></td><td colspan=\"2\"><b>Target Concept Details</b></td></tr><tr><td colspan=\"2\"><b>Codes</b> from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\" title=\"https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1\">Datatable CodeSystem (lists all variables)</a></td><td/><td colspan=\"2\"><b>Codes</b> from <a href=\"CodeSystem-mondo.html\" title=\"http://purl.obolibrary.org/obo/mondo.owl\">Mondo Disease Ontology</a></td></tr><tr><td style=\"border-right-width: 0px; border-bottom-style: none\">status</td><td style=\"border-left-width: 0px; border-bottom-style: none\">Subject's status (Case or Control)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td style=\"border-right-width: 0px\">MONDO:0017705</td><td style=\"border-left-width: 0px\">congenital pulmonary venous return anomaly</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none\"/><td style=\"border-top-style: none; border-left-width: 0px\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td style=\"border-right-width: 0px\">MONDO:0007130</td><td style=\"border-left-width: 0px\">congenital total pulmonary venous return anomaly</td></tr></table></div>" + ]; # + fhir:ConceptMap.url [ fhir:value "http://example.org/my-dataset/fhir/conceptmap/data-to-public"]; # + fhir:ConceptMap.version [ fhir:value "0.2.0"]; # + fhir:ConceptMap.status [ fhir:value "active"]; # + fhir:ConceptMap.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:ConceptMap.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:ConceptMap.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -41,10 +41,10 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:ConceptMap.purpose [ fhir:value "Represent transformations to public codes applied during data ingestion"]; - fhir:ConceptMap.sourceUri [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1"]; - fhir:ConceptMap.targetUri [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1"]; + ]; # + fhir:ConceptMap.purpose [ fhir:value "Represent transformations to public codes applied during data ingestion"]; # + fhir:ConceptMap.sourceUri [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1"]; # + fhir:ConceptMap.targetUri [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1"]; # fhir:ConceptMap.group [ fhir:index 0; fhir:ConceptMap.group.source [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1" ]; @@ -150,7 +150,7 @@ fhir:ConceptMap.group.element.target.equivalence [ fhir:value "equivalent" ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ConceptMap-example-study-data-dictionary-conceptmap-1.ttl.html b/ConceptMap-example-study-data-dictionary-conceptmap-1.ttl.html index 5f354a67..c977863a 100644 --- a/ConceptMap-example-study-data-dictionary-conceptmap-1.ttl.html +++ b/ConceptMap-example-study-data-dictionary-conceptmap-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Concept Map showing representing harmonization mappings - TTL Re Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,22 +294,22 @@ <h2 id="root">: Concept Map showing representing harmonization mappings - TTL Re a fhir:ConceptMap; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "example-study-data-dictionary-conceptmap-1"]; + <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "example-study-data-dictionary-conceptmap-1"]; # <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-harmony"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-harmony> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "extensions" ]; - fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><h2>null (http://example.org/my-dataset/fhir/conceptmap/data-to-public)</h2><p>Mapping from <a href=\"ValueSet-datatable-valueset-1.html\">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1</a> to <a href=\"ValueSet-datatable-mappings-valueset-1.html\">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1</a></p><p>ACTIVE. Published on 2022-11-28 09:07:57+0000 by NCPI FHIR Working Group (NCPI FHIR Working Group: <a href=\"https://github.com/nih-ncpi\">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href=\"mailto:meenchul@d3b.center\">meenchul@d3b.center</a>). </p><br/><p><b>Group 1</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <code>https://uts.nlm.nih.gov/uts/umls</code></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>subjectid (Subject's Unique Identifier)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C2348584 (Subject Unique Identifier)</td></tr><tr><td>gender</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C0079399 (Gender)</td></tr><tr><td>age_at_enrollment (Subject's Age at Enrollment in days)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C168843 (Age in Days at Enrollment)</td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>C1305855 (Body mass index)</td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C0872128 (case control)</td></tr></table><hr/><p><b>Group 2</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-loinc.html\">Logical Observation Identifiers, Names and Codes (LOINC)</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>LP35925-4 (Body mass index (BMI))</td></tr></table><hr/><p><b>Group 3</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"CodeSystem-hpo.html\">Human Phenotype Ontology</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>HP:0010772 (Anomalous pulmonary venous return)</td></tr></table><hr/><p><b>Group 4</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"CodeSystem-mondo.html\">Mondo Disease Ontology</a></p><table class=\"grid\"><tr><td colspan=\"2\"><b>Source Concept Details</b></td><td><b>Relationship</b></td><td colspan=\"2\"><b>Target Concept Details</b></td></tr><tr><td colspan=\"2\"><b>Codes</b> from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\" title=\"https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1\">Datatable CodeSystem (lists all variables)</a></td><td/><td colspan=\"2\"><b>Codes</b> from <a href=\"CodeSystem-mondo.html\" title=\"http://purl.obolibrary.org/obo/mondo.owl\">Mondo Disease Ontology</a></td></tr><tr><td style=\"border-right-width: 0px; border-bottom-style: none\">status</td><td style=\"border-left-width: 0px; border-bottom-style: none\">Subject's status (Case or Control)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td style=\"border-right-width: 0px\">MONDO:0017705</td><td style=\"border-left-width: 0px\">congenital pulmonary venous return anomaly</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none\"/><td style=\"border-top-style: none; border-left-width: 0px\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td style=\"border-right-width: 0px\">MONDO:0007130</td><td style=\"border-left-width: 0px\">congenital total pulmonary venous return anomaly</td></tr></table></div>" - ]; - <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.url">fhir:ConceptMap.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://example.org/my-dataset/fhir/conceptmap/data-to-public"]; - <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.version">fhir:ConceptMap.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.status">fhir:ConceptMap.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; - <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.date">fhir:ConceptMap.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.publisher">fhir:ConceptMap.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><h2>null (http://example.org/my-dataset/fhir/conceptmap/data-to-public)</h2><p>Mapping from <a href=\"ValueSet-datatable-valueset-1.html\">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1</a> to <a href=\"ValueSet-datatable-mappings-valueset-1.html\">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1</a></p><p>ACTIVE. Published on 2022-12-09 17:30:30+0000 by NCPI FHIR Working Group (NCPI FHIR Working Group: <a href=\"https://github.com/nih-ncpi\">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href=\"mailto:meenchul@d3b.center\">meenchul@d3b.center</a>). </p><br/><p><b>Group 1</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <code>https://uts.nlm.nih.gov/uts/umls</code></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>subjectid (Subject's Unique Identifier)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C2348584 (Subject Unique Identifier)</td></tr><tr><td>gender</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C0079399 (Gender)</td></tr><tr><td>age_at_enrollment (Subject's Age at Enrollment in days)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C168843 (Age in Days at Enrollment)</td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>C1305855 (Body mass index)</td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>C0872128 (case control)</td></tr></table><hr/><p><b>Group 2</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-loinc.html\">Logical Observation Identifiers, Names and Codes (LOINC)</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>LP35925-4 (Body mass index (BMI))</td></tr></table><hr/><p><b>Group 3</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"CodeSystem-hpo.html\">Human Phenotype Ontology</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>HP:0010772 (Anomalous pulmonary venous return)</td></tr></table><hr/><p><b>Group 4</b>Mapping from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a> to <a href=\"CodeSystem-mondo.html\">Mondo Disease Ontology</a></p><table class=\"grid\"><tr><td colspan=\"2\"><b>Source Concept Details</b></td><td><b>Relationship</b></td><td colspan=\"2\"><b>Target Concept Details</b></td></tr><tr><td colspan=\"2\"><b>Codes</b> from <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\" title=\"https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1\">Datatable CodeSystem (lists all variables)</a></td><td/><td colspan=\"2\"><b>Codes</b> from <a href=\"CodeSystem-mondo.html\" title=\"http://purl.obolibrary.org/obo/mondo.owl\">Mondo Disease Ontology</a></td></tr><tr><td style=\"border-right-width: 0px; border-bottom-style: none\">status</td><td style=\"border-left-width: 0px; border-bottom-style: none\">Subject's status (Case or Control)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td style=\"border-right-width: 0px\">MONDO:0017705</td><td style=\"border-left-width: 0px\">congenital pulmonary venous return anomaly</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none\"/><td style=\"border-top-style: none; border-left-width: 0px\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td style=\"border-right-width: 0px\">MONDO:0007130</td><td style=\"border-left-width: 0px\">congenital total pulmonary venous return anomaly</td></tr></table></div>" + ]; # + <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.url">fhir:ConceptMap.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://example.org/my-dataset/fhir/conceptmap/data-to-public"]; # + <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.version">fhir:ConceptMap.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.status">fhir:ConceptMap.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; # + <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.date">fhir:ConceptMap.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.publisher">fhir:ConceptMap.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.contact">fhir:ConceptMap.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -325,10 +325,10 @@ <h2 id="root">: Concept Map showing representing harmonization mappings - TTL Re <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.purpose">fhir:ConceptMap.purpose</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Represent transformations to public codes applied during data ingestion"]; - <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.source[x]">fhir:ConceptMap.sourceUri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1"]; - <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.target[x]">fhir:ConceptMap.targetUri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1"]; + ]; # + <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.purpose">fhir:ConceptMap.purpose</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Represent transformations to public codes applied during data ingestion"]; # + <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.source[x]">fhir:ConceptMap.sourceUri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1"]; # + <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.target[x]">fhir:ConceptMap.targetUri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1"]; # <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.group">fhir:ConceptMap.group</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.group.source">fhir:ConceptMap.group.source</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1" ]; @@ -417,7 +417,7 @@ <h2 id="root">: Concept Map showing representing harmonization mappings - TTL Re <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.group.element.target.code">fhir:ConceptMap.group.element.target.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "MONDO:0007130" ]; <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.group.element.target.display">fhir:ConceptMap.group.element.target.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "congenital total pulmonary venous return anomaly" ]; <a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.group.element.target.equivalence">fhir:ConceptMap.group.element.target.equivalence</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "equivalent" ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -455,7 +455,7 @@ <h2 id="root">: Concept Map showing representing harmonization mappings - TTL Re <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ConceptMap-example-study-data-dictionary-conceptmap-1.xml b/ConceptMap-example-study-data-dictionary-conceptmap-1.xml index e13f7076..7473ce8c 100644 --- a/ConceptMap-example-study-data-dictionary-conceptmap-1.xml +++ b/ConceptMap-example-study-data-dictionary-conceptmap-1.xml @@ -6,12 +6,12 @@ <profile value="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-harmony"/> </meta> <text> - <status value="extensions"/><div xmlns="http://www.w3.org/1999/xhtml"><h2>null (http://example.org/my-dataset/fhir/conceptmap/data-to-public)</h2><p>Mapping from <a href="ValueSet-datatable-valueset-1.html">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1</a> to <a href="ValueSet-datatable-mappings-valueset-1.html">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1</a></p><p>ACTIVE. Published on 2022-11-28 09:07:57+0000 by NCPI FHIR Working Group (NCPI FHIR Working Group: <a href="https://github.com/nih-ncpi">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href="mailto:meenchul@d3b.center">meenchul@d3b.center</a>). </p><br/><p><b>Group 1</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <code>https://uts.nlm.nih.gov/uts/umls</code></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>subjectid (Subject's Unique Identifier)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C2348584 (Subject Unique Identifier)</td></tr><tr><td>gender</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C0079399 (Gender)</td></tr><tr><td>age_at_enrollment (Subject's Age at Enrollment in days)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C168843 (Age in Days at Enrollment)</td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider" title="wider">maps to wider concept</a></td><td>C1305855 (Body mass index)</td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C0872128 (case control)</td></tr></table><hr/><p><b>Group 2</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <a href="http://terminology.hl7.org/5.0.0/CodeSystem-v3-loinc.html">Logical Observation Identifiers, Names and Codes (LOINC)</a></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider" title="wider">maps to wider concept</a></td><td>LP35925-4 (Body mass index (BMI))</td></tr></table><hr/><p><b>Group 3</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <a href="CodeSystem-hpo.html">Human Phenotype Ontology</a></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>HP:0010772 (Anomalous pulmonary venous return)</td></tr></table><hr/><p><b>Group 4</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <a href="CodeSystem-mondo.html">Mondo Disease Ontology</a></p><table class="grid"><tr><td colspan="2"><b>Source Concept Details</b></td><td><b>Relationship</b></td><td colspan="2"><b>Target Concept Details</b></td></tr><tr><td colspan="2"><b>Codes</b> from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1">Datatable CodeSystem (lists all variables)</a></td><td/><td colspan="2"><b>Codes</b> from <a href="CodeSystem-mondo.html" title="http://purl.obolibrary.org/obo/mondo.owl">Mondo Disease Ontology</a></td></tr><tr><td style="border-right-width: 0px; border-bottom-style: none">status</td><td style="border-left-width: 0px; border-bottom-style: none">Subject's status (Case or Control)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td style="border-right-width: 0px">MONDO:0017705</td><td style="border-left-width: 0px">congenital pulmonary venous return anomaly</td></tr><tr><td style="border-right-width: 0px; border-top-style: none"/><td style="border-top-style: none; border-left-width: 0px"/><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td style="border-right-width: 0px">MONDO:0007130</td><td style="border-left-width: 0px">congenital total pulmonary venous return anomaly</td></tr></table></div> + <status value="extensions"/><div xmlns="http://www.w3.org/1999/xhtml"><h2>null (http://example.org/my-dataset/fhir/conceptmap/data-to-public)</h2><p>Mapping from <a href="ValueSet-datatable-valueset-1.html">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1</a> to <a href="ValueSet-datatable-mappings-valueset-1.html">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1</a></p><p>ACTIVE. Published on 2022-12-09 17:30:30+0000 by NCPI FHIR Working Group (NCPI FHIR Working Group: <a href="https://github.com/nih-ncpi">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href="mailto:meenchul@d3b.center">meenchul@d3b.center</a>). </p><br/><p><b>Group 1</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <code>https://uts.nlm.nih.gov/uts/umls</code></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>subjectid (Subject's Unique Identifier)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C2348584 (Subject Unique Identifier)</td></tr><tr><td>gender</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C0079399 (Gender)</td></tr><tr><td>age_at_enrollment (Subject's Age at Enrollment in days)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C168843 (Age in Days at Enrollment)</td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider" title="wider">maps to wider concept</a></td><td>C1305855 (Body mass index)</td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C0872128 (case control)</td></tr></table><hr/><p><b>Group 2</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <a href="http://terminology.hl7.org/5.0.0/CodeSystem-v3-loinc.html">Logical Observation Identifiers, Names and Codes (LOINC)</a></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider" title="wider">maps to wider concept</a></td><td>LP35925-4 (Body mass index (BMI))</td></tr></table><hr/><p><b>Group 3</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <a href="CodeSystem-hpo.html">Human Phenotype Ontology</a></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>HP:0010772 (Anomalous pulmonary venous return)</td></tr></table><hr/><p><b>Group 4</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <a href="CodeSystem-mondo.html">Mondo Disease Ontology</a></p><table class="grid"><tr><td colspan="2"><b>Source Concept Details</b></td><td><b>Relationship</b></td><td colspan="2"><b>Target Concept Details</b></td></tr><tr><td colspan="2"><b>Codes</b> from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1">Datatable CodeSystem (lists all variables)</a></td><td/><td colspan="2"><b>Codes</b> from <a href="CodeSystem-mondo.html" title="http://purl.obolibrary.org/obo/mondo.owl">Mondo Disease Ontology</a></td></tr><tr><td style="border-right-width: 0px; border-bottom-style: none">status</td><td style="border-left-width: 0px; border-bottom-style: none">Subject's status (Case or Control)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td style="border-right-width: 0px">MONDO:0017705</td><td style="border-left-width: 0px">congenital pulmonary venous return anomaly</td></tr><tr><td style="border-right-width: 0px; border-top-style: none"/><td style="border-top-style: none; border-left-width: 0px"/><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td style="border-right-width: 0px">MONDO:0007130</td><td style="border-left-width: 0px">congenital total pulmonary venous return anomaly</td></tr></table></div> </text> <url value="http://example.org/my-dataset/fhir/conceptmap/data-to-public"/> <version value="0.2.0"/> <status value="active"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/ConceptMap-example-study-data-dictionary-conceptmap-1.xml.html b/ConceptMap-example-study-data-dictionary-conceptmap-1.xml.html index c410d220..4e36d5ad 100644 --- a/ConceptMap-example-study-data-dictionary-conceptmap-1.xml.html +++ b/ConceptMap-example-study-data-dictionary-conceptmap-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Concept Map showing representing harmonization mappings - XML Re Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,12 +294,12 @@ <h2 id="root">: Concept Map showing representing harmonization mappings - XML Re </meta> <<a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.text">text</a>> <<a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="extensions"/> - <div xmlns="http://www.w3.org/1999/xhtml"><h2>null (http://example.org/my-dataset/fhir/conceptmap/data-to-public)</h2><p>Mapping from <a href="ValueSet-datatable-valueset-1.html">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1</a> to <a href="ValueSet-datatable-mappings-valueset-1.html">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1</a></p><p>ACTIVE. Published on 2022-11-28 09:07:57+0000 by NCPI FHIR Working Group (NCPI FHIR Working Group: <a href="https://github.com/nih-ncpi">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href="mailto:meenchul@d3b.center">meenchul@d3b.center</a>). </p><br/><p><b>Group 1</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <code>https://uts.nlm.nih.gov/uts/umls</code></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>subjectid (Subject's Unique Identifier)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C2348584 (Subject Unique Identifier)</td></tr><tr><td>gender</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C0079399 (Gender)</td></tr><tr><td>age_at_enrollment (Subject's Age at Enrollment in days)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C168843 (Age in Days at Enrollment)</td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider" title="wider">maps to wider concept</a></td><td>C1305855 (Body mass index)</td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C0872128 (case control)</td></tr></table><hr/><p><b>Group 2</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <a href="http://terminology.hl7.org/5.0.0/CodeSystem-v3-loinc.html">Logical Observation Identifiers, Names and Codes (LOINC)</a></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider" title="wider">maps to wider concept</a></td><td>LP35925-4 (Body mass index (BMI))</td></tr></table><hr/><p><b>Group 3</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <a href="CodeSystem-hpo.html">Human Phenotype Ontology</a></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>HP:0010772 (Anomalous pulmonary venous return)</td></tr></table><hr/><p><b>Group 4</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <a href="CodeSystem-mondo.html">Mondo Disease Ontology</a></p><table class="grid"><tr><td colspan="2"><b>Source Concept Details</b></td><td><b>Relationship</b></td><td colspan="2"><b>Target Concept Details</b></td></tr><tr><td colspan="2"><b>Codes</b> from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1">Datatable CodeSystem (lists all variables)</a></td><td/><td colspan="2"><b>Codes</b> from <a href="CodeSystem-mondo.html" title="http://purl.obolibrary.org/obo/mondo.owl">Mondo Disease Ontology</a></td></tr><tr><td style="border-right-width: 0px; border-bottom-style: none">status</td><td style="border-left-width: 0px; border-bottom-style: none">Subject's status (Case or Control)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td style="border-right-width: 0px">MONDO:0017705</td><td style="border-left-width: 0px">congenital pulmonary venous return anomaly</td></tr><tr><td style="border-right-width: 0px; border-top-style: none"/><td style="border-top-style: none; border-left-width: 0px"/><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td style="border-right-width: 0px">MONDO:0007130</td><td style="border-left-width: 0px">congenital total pulmonary venous return anomaly</td></tr></table></div><a name="end-xhtml"></a> + <div xmlns="http://www.w3.org/1999/xhtml"><h2>null (http://example.org/my-dataset/fhir/conceptmap/data-to-public)</h2><p>Mapping from <a href="ValueSet-datatable-valueset-1.html">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1</a> to <a href="ValueSet-datatable-mappings-valueset-1.html">https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1</a></p><p>ACTIVE. Published on 2022-12-09 17:30:30+0000 by NCPI FHIR Working Group (NCPI FHIR Working Group: <a href="https://github.com/nih-ncpi">https://github.com/nih-ncpi</a>, Meen Chul Kim: <a href="mailto:meenchul@d3b.center">meenchul@d3b.center</a>). </p><br/><p><b>Group 1</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <code>https://uts.nlm.nih.gov/uts/umls</code></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>subjectid (Subject's Unique Identifier)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C2348584 (Subject Unique Identifier)</td></tr><tr><td>gender</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C0079399 (Gender)</td></tr><tr><td>age_at_enrollment (Subject's Age at Enrollment in days)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C168843 (Age in Days at Enrollment)</td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider" title="wider">maps to wider concept</a></td><td>C1305855 (Body mass index)</td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>C0872128 (case control)</td></tr></table><hr/><p><b>Group 2</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <a href="http://terminology.hl7.org/5.0.0/CodeSystem-v3-loinc.html">Logical Observation Identifiers, Names and Codes (LOINC)</a></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>bmi (Subject's BMI, Measured at Enrollment)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider" title="wider">maps to wider concept</a></td><td>LP35925-4 (Body mass index (BMI))</td></tr></table><hr/><p><b>Group 3</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <a href="CodeSystem-hpo.html">Human Phenotype Ontology</a></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>status (Subject's status (Case or Control))</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>HP:0010772 (Anomalous pulmonary venous return)</td></tr></table><hr/><p><b>Group 4</b>Mapping from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables)</a> to <a href="CodeSystem-mondo.html">Mondo Disease Ontology</a></p><table class="grid"><tr><td colspan="2"><b>Source Concept Details</b></td><td><b>Relationship</b></td><td colspan="2"><b>Target Concept Details</b></td></tr><tr><td colspan="2"><b>Codes</b> from <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1">Datatable CodeSystem (lists all variables)</a></td><td/><td colspan="2"><b>Codes</b> from <a href="CodeSystem-mondo.html" title="http://purl.obolibrary.org/obo/mondo.owl">Mondo Disease Ontology</a></td></tr><tr><td style="border-right-width: 0px; border-bottom-style: none">status</td><td style="border-left-width: 0px; border-bottom-style: none">Subject's status (Case or Control)</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td style="border-right-width: 0px">MONDO:0017705</td><td style="border-left-width: 0px">congenital pulmonary venous return anomaly</td></tr><tr><td style="border-right-width: 0px; border-top-style: none"/><td style="border-top-style: none; border-left-width: 0px"/><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td style="border-right-width: 0px">MONDO:0007130</td><td style="border-left-width: 0px">congenital total pulmonary venous return anomaly</td></tr></table></div><a name="end-xhtml"></a> </text> <<a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.url">url</a> <a href="http://hl7.org/fhir/R4/datatypes.html#uri">value</a>="http://example.org/my-dataset/fhir/conceptmap/data-to-public"/> <<a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.version">version</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="0.2.0"/> <<a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="active"/> - <<a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/conceptmap.html#ConceptMap.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -449,7 +449,7 @@ <h2 id="root">: Concept Map showing representing harmonization mappings - XML Re <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Condition-disease-example-1.change.history.html b/Condition-disease-example-1.change.history.html index c55fbd94..11b61fa1 100644 --- a/Condition-disease-example-1.change.history.html +++ b/Condition-disease-example-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Condition/disease-example-1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Condition-disease-example-1.html b/Condition-disease-example-1.html index ad55d23f..0cd67e01 100644 --- a/Condition-disease-example-1.html +++ b/Condition-disease-example-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Condition: disease-example-1</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Condition-disease-example-1.json b/Condition-disease-example-1.json index b34ce62d..6e8afaa3 100644 --- a/Condition-disease-example-1.json +++ b/Condition-disease-example-1.json @@ -1,89 +1,73 @@ -{ - "resourceType": "Condition", - "id": "disease-example-1", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/disease" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Condition</b><a name=\"disease-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Condition "disease-example-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-disease.html\">NCPI Disease</a></p></div><p><b>clinicalStatus</b>: Active <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-condition-clinical.html\">Condition Clinical Status Codes</a>#active)</span></p><p><b>verificationStatus</b>: Affected <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-condition-ver-status.html\">ConditionVerificationStatus</a>#confirmed "Confirmed")</span></p><p><b>category</b>: Encounter Diagnosis <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-condition-category.html\">Condition Category Codes</a>#encounter-diagnosis)</span></p><p><b>code</b>: Neuroblastoma <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncit.html\">NCI Thesaurus</a>#NCIT:Neuroblastoma)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>recordedDate</b>: </p></div>" - }, - "clinicalStatus": { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/condition-clinical", - "code": "active", - "display": "Active" - } - ], - "text": "Active" - }, - "verificationStatus": { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/condition-ver-status", - "code": "confirmed", - "display": "Confirmed" - } - ], - "text": "Affected" - }, - "category": [ - { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/condition-category", - "code": "encounter-diagnosis", - "display": "Encounter Diagnosis" - } - ] - } - ], - "code": { - "coding": [ - { - "system": "http://purl.obolibrary.org/obo/ncit.owl", - "code": "NCIT:Neuroblastoma", - "display": "Neuroblastoma" - } - ], - "text": "Neuroblastoma" - }, - "subject": { - "reference": "Patient/patient-example-1" - }, - "_recordedDate": { - "extension": [ - { - "extension": [ - { - "url": "target", - "valueReference": { - "reference": "Patient/patient-example-1" - } - }, - { - "url": "targetPath", - "valueString": "birthDate" - }, - { - "url": "relationship", - "valueCode": "after" - }, - { - "url": "offset", - "valueDuration": { - "value": 25, - "unit": "d", - "system": "http://unitsofmeasure.org", - "code": "days" - } - } - ], - "url": "http://hl7.org/fhir/StructureDefinition/cqf-relativeDateTime" - } - ] - } +{ + "resourceType" : "Condition", + "id" : "disease-example-1", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/disease"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Condition</b><a name=\"disease-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Condition "disease-example-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-disease.html\">NCPI Disease</a></p></div><p><b>clinicalStatus</b>: Active <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-condition-clinical.html\">Condition Clinical Status Codes</a>#active)</span></p><p><b>verificationStatus</b>: Affected <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-condition-ver-status.html\">ConditionVerificationStatus</a>#confirmed "Confirmed")</span></p><p><b>category</b>: Encounter Diagnosis <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-condition-category.html\">Condition Category Codes</a>#encounter-diagnosis)</span></p><p><b>code</b>: Neuroblastoma <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncit.html\">NCI Thesaurus</a>#NCIT:Neuroblastoma)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>recordedDate</b>: </p></div>" + }, + "clinicalStatus" : { + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/condition-clinical", + "code" : "active", + "display" : "Active" + }], + "text" : "Active" + }, + "verificationStatus" : { + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/condition-ver-status", + "code" : "confirmed", + "display" : "Confirmed" + }], + "text" : "Affected" + }, + "category" : [{ + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/condition-category", + "code" : "encounter-diagnosis", + "display" : "Encounter Diagnosis" + }] + }], + "code" : { + "coding" : [{ + "system" : "http://purl.obolibrary.org/obo/ncit.owl", + "code" : "NCIT:Neuroblastoma", + "display" : "Neuroblastoma" + }], + "text" : "Neuroblastoma" + }, + "subject" : { + "reference" : "Patient/patient-example-1" + }, + "_recordedDate" : { + "extension" : [{ + "extension" : [{ + "url" : "target", + "valueReference" : { + "reference" : "Patient/patient-example-1" + } + }, + { + "url" : "targetPath", + "valueString" : "birthDate" + }, + { + "url" : "relationship", + "valueCode" : "after" + }, + { + "url" : "offset", + "valueDuration" : { + "value" : 25, + "unit" : "d", + "system" : "http://unitsofmeasure.org", + "code" : "days" + } + }], + "url" : "http://hl7.org/fhir/StructureDefinition/cqf-relativeDateTime" + }] + } } \ No newline at end of file diff --git a/Condition-disease-example-1.json.html b/Condition-disease-example-1.json.html index 75e01c54..e5d5d29b 100644 --- a/Condition-disease-example-1.json.html +++ b/Condition-disease-example-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -401,7 +401,7 @@ <h2 id="root">: disease-example-1 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Condition-disease-example-1.ttl b/Condition-disease-example-1.ttl index 8a32182c..db04e58a 100644 --- a/Condition-disease-example-1.ttl +++ b/Condition-disease-example-1.ttl @@ -7,18 +7,18 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Condition/disease-example-1> a fhir:Condition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "disease-example-1"]; + fhir:Resource.id [ fhir:value "disease-example-1"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/disease"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/disease> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Condition</b><a name=\"disease-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Condition "disease-example-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-disease.html\">NCPI Disease</a></p></div><p><b>clinicalStatus</b>: Active <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-condition-clinical.html\">Condition Clinical Status Codes</a>#active)</span></p><p><b>verificationStatus</b>: Affected <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-condition-ver-status.html\">ConditionVerificationStatus</a>#confirmed "Confirmed")</span></p><p><b>category</b>: Encounter Diagnosis <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-condition-category.html\">Condition Category Codes</a>#encounter-diagnosis)</span></p><p><b>code</b>: Neuroblastoma <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncit.html\">NCI Thesaurus</a>#NCIT:Neuroblastoma)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>recordedDate</b>: </p></div>" - ]; + ]; # fhir:Condition.clinicalStatus [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -27,7 +27,7 @@ fhir:Coding.display [ fhir:value "Active" ] ]; fhir:CodeableConcept.text [ fhir:value "Active" ] - ]; + ]; # fhir:Condition.verificationStatus [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -36,7 +36,7 @@ fhir:Coding.display [ fhir:value "Confirmed" ] ]; fhir:CodeableConcept.text [ fhir:value "Affected" ] - ]; + ]; # fhir:Condition.category [ fhir:index 0; fhir:CodeableConcept.coding [ @@ -45,7 +45,7 @@ fhir:Coding.code [ fhir:value "encounter-diagnosis" ]; fhir:Coding.display [ fhir:value "Encounter Diagnosis" ] ] - ]; + ]; # fhir:Condition.code [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -54,11 +54,11 @@ fhir:Coding.display [ fhir:value "Neuroblastoma" ] ]; fhir:CodeableConcept.text [ fhir:value "Neuroblastoma" ] - ]; + ]; # fhir:Condition.subject [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-1>; fhir:Reference.reference [ fhir:value "Patient/patient-example-1" ] - ]; + ]; # fhir:Condition.recordedDate [ fhir:Element.extension [ fhir:index 0; @@ -89,7 +89,7 @@ ]; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/cqf-relativeDateTime" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Condition-disease-example-1.ttl.html b/Condition-disease-example-1.ttl.html index f1c09758..ba98a478 100644 --- a/Condition-disease-example-1.ttl.html +++ b/Condition-disease-example-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,17 +292,17 @@ <h2 id="root">: disease-example-1 - TTL Representation</h2> a fhir:Condition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/condition.html#Condition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "disease-example-1"]; + <a href="http://hl7.org/fhir/R4/condition.html#Condition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "disease-example-1"]; # <a href="http://hl7.org/fhir/R4/condition.html#Condition.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/disease"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/disease> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/condition.html#Condition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Condition</b><a name=\"disease-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Condition &quot;disease-example-1&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-disease.html\">NCPI Disease</a></p></div><p><b>clinicalStatus</b>: Active <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-condition-clinical.html\">Condition Clinical Status Codes</a>#active)</span></p><p><b>verificationStatus</b>: Affected <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-condition-ver-status.html\">ConditionVerificationStatus</a>#confirmed &quot;Confirmed&quot;)</span></p><p><b>category</b>: Encounter Diagnosis <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-condition-category.html\">Condition Category Codes</a>#encounter-diagnosis)</span></p><p><b>code</b>: Neuroblastoma <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncit.html\">NCI Thesaurus</a>#NCIT:Neuroblastoma)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> &quot; SMITH&quot;</p><p><b>recordedDate</b>: </p></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/condition.html#Condition.clinicalStatus">fhir:Condition.clinicalStatus</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -310,7 +310,7 @@ <h2 id="root">: disease-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Active" ] ]; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.text">fhir:CodeableConcept.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Active" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/condition.html#Condition.verificationStatus">fhir:Condition.verificationStatus</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -318,7 +318,7 @@ <h2 id="root">: disease-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "confirmed" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Confirmed" ] ]; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.text">fhir:CodeableConcept.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Affected" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/condition.html#Condition.category">fhir:Condition.category</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ @@ -326,7 +326,7 @@ <h2 id="root">: disease-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://terminology.hl7.org/CodeSystem/condition-category" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "encounter-diagnosis" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Encounter Diagnosis" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/condition.html#Condition.code">fhir:Condition.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -334,10 +334,10 @@ <h2 id="root">: disease-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "NCIT:Neuroblastoma" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Neuroblastoma" ] ]; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.text">fhir:CodeableConcept.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Neuroblastoma" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/condition.html#Condition.subject">fhir:Condition.subject</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/patient-example-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/condition.html#Condition.recordedDate">fhir:Condition.recordedDate</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime#dateTime.extension">fhir:Element.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -360,7 +360,7 @@ <h2 id="root">: disease-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Duration#Duration.system">fhir:Quantity.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://unitsofmeasure.org" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Duration#Duration.code">fhir:Quantity.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "days" ] ] ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/cqf-relativeDateTime" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -398,7 +398,7 @@ <h2 id="root">: disease-example-1 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Condition-disease-example-1.xml.html b/Condition-disease-example-1.xml.html index 7440b141..54446001 100644 --- a/Condition-disease-example-1.xml.html +++ b/Condition-disease-example-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -385,7 +385,7 @@ <h2 id="root">: disease-example-1 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Condition-phenotype-example-1.change.history.html b/Condition-phenotype-example-1.change.history.html index 6edf9f45..b4e7337b 100644 --- a/Condition-phenotype-example-1.change.history.html +++ b/Condition-phenotype-example-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Condition/phenotype-example-1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Condition-phenotype-example-1.html b/Condition-phenotype-example-1.html index afc747f1..0a2e53ac 100644 --- a/Condition-phenotype-example-1.html +++ b/Condition-phenotype-example-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Condition: phenotype-example-1</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Condition-phenotype-example-1.json b/Condition-phenotype-example-1.json index b2902719..592a40ee 100644 --- a/Condition-phenotype-example-1.json +++ b/Condition-phenotype-example-1.json @@ -1,67 +1,57 @@ -{ - "resourceType": "Condition", - "id": "phenotype-example-1", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/phenotype" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Condition</b><a name=\"phenotype-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Condition "phenotype-example-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-phenotype.html\">NCPI Phenotype</a></p></div><p><b>verificationStatus</b>: Confirmed <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-condition-ver-status.html\">ConditionVerificationStatus</a>#confirmed)</span></p><p><b>code</b>: Present: Vesicoureteral reflux <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-hpo.html\">Human Phenotype Ontology</a>#HP:0000076 "Vesicoureteral reflux")</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>recordedDate</b>: </p></div>" - }, - "verificationStatus": { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/condition-ver-status", - "code": "confirmed", - "display": "Confirmed" - } - ] - }, - "code": { - "coding": [ - { - "system": "http://purl.obolibrary.org/obo/hp.owl", - "code": "HP:0000076", - "display": "Vesicoureteral reflux" - } - ], - "text": "Present: Vesicoureteral reflux" - }, - "subject": { - "reference": "Patient/patient-example-1" - }, - "_recordedDate": { - "extension": [ - { - "extension": [ - { - "url": "target", - "valueReference": { - "reference": "Patient/patient-example-1" - } - }, - { - "url": "targetPath", - "valueString": "birthDate" - }, - { - "url": "relationship", - "valueCode": "after" - }, - { - "url": "offset", - "valueDuration": { - "value": 2, - "unit": "w", - "system": "http://unitsofmeasure.org", - "code": "weeks" - } - } - ], - "url": "http://hl7.org/fhir/StructureDefinition/cqf-relativeDateTime" - } - ] - } +{ + "resourceType" : "Condition", + "id" : "phenotype-example-1", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/phenotype"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Condition</b><a name=\"phenotype-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Condition "phenotype-example-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-phenotype.html\">NCPI Phenotype</a></p></div><p><b>verificationStatus</b>: Confirmed <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-condition-ver-status.html\">ConditionVerificationStatus</a>#confirmed)</span></p><p><b>code</b>: Present: Vesicoureteral reflux <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-hpo.html\">Human Phenotype Ontology</a>#HP:0000076 "Vesicoureteral reflux")</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>recordedDate</b>: </p></div>" + }, + "verificationStatus" : { + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/condition-ver-status", + "code" : "confirmed", + "display" : "Confirmed" + }] + }, + "code" : { + "coding" : [{ + "system" : "http://purl.obolibrary.org/obo/hp.owl", + "code" : "HP:0000076", + "display" : "Vesicoureteral reflux" + }], + "text" : "Present: Vesicoureteral reflux" + }, + "subject" : { + "reference" : "Patient/patient-example-1" + }, + "_recordedDate" : { + "extension" : [{ + "extension" : [{ + "url" : "target", + "valueReference" : { + "reference" : "Patient/patient-example-1" + } + }, + { + "url" : "targetPath", + "valueString" : "birthDate" + }, + { + "url" : "relationship", + "valueCode" : "after" + }, + { + "url" : "offset", + "valueDuration" : { + "value" : 2, + "unit" : "w", + "system" : "http://unitsofmeasure.org", + "code" : "weeks" + } + }], + "url" : "http://hl7.org/fhir/StructureDefinition/cqf-relativeDateTime" + }] + } } \ No newline at end of file diff --git a/Condition-phenotype-example-1.json.html b/Condition-phenotype-example-1.json.html index 74d45bc5..f861a862 100644 --- a/Condition-phenotype-example-1.json.html +++ b/Condition-phenotype-example-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -379,7 +379,7 @@ <h2 id="root">: phenotype-example-1 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Condition-phenotype-example-1.ttl b/Condition-phenotype-example-1.ttl index 9378bc06..2a13770f 100644 --- a/Condition-phenotype-example-1.ttl +++ b/Condition-phenotype-example-1.ttl @@ -7,18 +7,18 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Condition/phenotype-example-1> a fhir:Condition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "phenotype-example-1"]; + fhir:Resource.id [ fhir:value "phenotype-example-1"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/phenotype"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/phenotype> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Condition</b><a name=\"phenotype-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Condition "phenotype-example-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-phenotype.html\">NCPI Phenotype</a></p></div><p><b>verificationStatus</b>: Confirmed <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-condition-ver-status.html\">ConditionVerificationStatus</a>#confirmed)</span></p><p><b>code</b>: Present: Vesicoureteral reflux <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-hpo.html\">Human Phenotype Ontology</a>#HP:0000076 "Vesicoureteral reflux")</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>recordedDate</b>: </p></div>" - ]; + ]; # fhir:Condition.verificationStatus [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -26,7 +26,7 @@ fhir:Coding.code [ fhir:value "confirmed" ]; fhir:Coding.display [ fhir:value "Confirmed" ] ] - ]; + ]; # fhir:Condition.code [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -35,11 +35,11 @@ fhir:Coding.display [ fhir:value "Vesicoureteral reflux" ] ]; fhir:CodeableConcept.text [ fhir:value "Present: Vesicoureteral reflux" ] - ]; + ]; # fhir:Condition.subject [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-1>; fhir:Reference.reference [ fhir:value "Patient/patient-example-1" ] - ]; + ]; # fhir:Condition.recordedDate [ fhir:Element.extension [ fhir:index 0; @@ -70,7 +70,7 @@ ]; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/cqf-relativeDateTime" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Condition-phenotype-example-1.ttl.html b/Condition-phenotype-example-1.ttl.html index a7e7f067..5ce9ad5a 100644 --- a/Condition-phenotype-example-1.ttl.html +++ b/Condition-phenotype-example-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,24 +292,24 @@ <h2 id="root">: phenotype-example-1 - TTL Representation</h2> a fhir:Condition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/condition.html#Condition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "phenotype-example-1"]; + <a href="http://hl7.org/fhir/R4/condition.html#Condition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "phenotype-example-1"]; # <a href="http://hl7.org/fhir/R4/condition.html#Condition.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/phenotype"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/phenotype> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/condition.html#Condition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Condition</b><a name=\"phenotype-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Condition &quot;phenotype-example-1&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-phenotype.html\">NCPI Phenotype</a></p></div><p><b>verificationStatus</b>: Confirmed <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-condition-ver-status.html\">ConditionVerificationStatus</a>#confirmed)</span></p><p><b>code</b>: Present: Vesicoureteral reflux <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-hpo.html\">Human Phenotype Ontology</a>#HP:0000076 &quot;Vesicoureteral reflux&quot;)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> &quot; SMITH&quot;</p><p><b>recordedDate</b>: </p></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/condition.html#Condition.verificationStatus">fhir:Condition.verificationStatus</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://terminology.hl7.org/CodeSystem/condition-ver-status" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "confirmed" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Confirmed" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/condition.html#Condition.code">fhir:Condition.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -317,10 +317,10 @@ <h2 id="root">: phenotype-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "HP:0000076" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Vesicoureteral reflux" ] ]; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.text">fhir:CodeableConcept.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Present: Vesicoureteral reflux" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/condition.html#Condition.subject">fhir:Condition.subject</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/patient-example-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/condition.html#Condition.recordedDate">fhir:Condition.recordedDate</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime#dateTime.extension">fhir:Element.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -343,7 +343,7 @@ <h2 id="root">: phenotype-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Duration#Duration.system">fhir:Quantity.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://unitsofmeasure.org" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Duration#Duration.code">fhir:Quantity.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "weeks" ] ] ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/cqf-relativeDateTime" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -381,7 +381,7 @@ <h2 id="root">: phenotype-example-1 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Condition-phenotype-example-1.xml.html b/Condition-phenotype-example-1.xml.html index eb5df680..4cf6e032 100644 --- a/Condition-phenotype-example-1.xml.html +++ b/Condition-phenotype-example-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -367,7 +367,7 @@ <h2 id="root">: phenotype-example-1 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/DiagnosticReport-diagnostic-report-1.change.history.html b/DiagnosticReport-diagnostic-report-1.change.history.html index 22124168..1eb4096e 100644 --- a/DiagnosticReport-diagnostic-report-1.change.history.html +++ b/DiagnosticReport-diagnostic-report-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: DiagnosticReport/diagnostic-report-1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/DiagnosticReport-diagnostic-report-1.html b/DiagnosticReport-diagnostic-report-1.html index e3e66e6a..0df0aa31 100644 --- a/DiagnosticReport-diagnostic-report-1.html +++ b/DiagnosticReport-diagnostic-report-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example DiagnosticReport: diagnostic-report-1</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/DiagnosticReport-diagnostic-report-1.json b/DiagnosticReport-diagnostic-report-1.json index 78182104..0bd725c9 100644 --- a/DiagnosticReport-diagnostic-report-1.json +++ b/DiagnosticReport-diagnostic-report-1.json @@ -1,37 +1,31 @@ -{ - "resourceType": "DiagnosticReport", - "id": "diagnostic-report-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><h2><span title=\"Codes: {http://loinc.org 81247-9}\">Master HL7 genetic variant reporting panel</span> </h2><table class=\"grid\"><tr><td>Subject</td><td><b>Mariah Abigail Smith(OFFICIAL)</b> female, DoB: 2019-06-15</td></tr></table><p><b>Report Details</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Value</b></td></tr><tr><td><a href=\"Observation-variant-example-1.html\"><span title=\"Codes: {http://loinc.org 69548-6}\">Genetic variant assessment</span></a></td><td><span title=\"Codes: {http://loinc.org LA9633-4}\">Present</span></td></tr><tr><td><a href=\"Observation-diagnostic-implication-1.html\"><span title=\"Codes: {http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes diagnostic-implication}\">Diagnostic Implication</span></a></td><td/></tr></table></div>" - }, - "extension": [ - { - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info", - "valueReference": { - "reference": "Task/task-example-1" - } - } - ], - "status": "final", - "code": { - "coding": [ - { - "system": "http://loinc.org", - "code": "81247-9", - "display": "Master HL7 genetic variant reporting panel" - } - ] - }, - "subject": { - "reference": "Patient/patient-example-1" - }, - "result": [ - { - "reference": "Observation/variant-example-1" - }, - { - "reference": "Observation/diagnostic-implication-1" - } - ] +{ + "resourceType" : "DiagnosticReport", + "id" : "diagnostic-report-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><h2><span title=\"Codes: {http://loinc.org 81247-9}\">Master HL7 genetic variant reporting panel</span> </h2><table class=\"grid\"><tr><td>Subject</td><td><b>Mariah Abigail Smith(OFFICIAL)</b> female, DoB: 2019-06-15</td></tr></table><p><b>Report Details</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Value</b></td></tr><tr><td><a href=\"Observation-variant-example-1.html\"><span title=\"Codes: {http://loinc.org 69548-6}\">Genetic variant assessment</span></a></td><td><span title=\"Codes: {http://loinc.org LA9633-4}\">Present</span></td></tr><tr><td><a href=\"Observation-diagnostic-implication-1.html\"><span title=\"Codes: {http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes diagnostic-implication}\">Diagnostic Implication</span></a></td><td/></tr></table></div>" + }, + "extension" : [{ + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info", + "valueReference" : { + "reference" : "Task/task-example-1" + } + }], + "status" : "final", + "code" : { + "coding" : [{ + "system" : "http://loinc.org", + "code" : "81247-9", + "display" : "Master HL7 genetic variant reporting panel" + }] + }, + "subject" : { + "reference" : "Patient/patient-example-1" + }, + "result" : [{ + "reference" : "Observation/variant-example-1" + }, + { + "reference" : "Observation/diagnostic-implication-1" + }] } \ No newline at end of file diff --git a/DiagnosticReport-diagnostic-report-1.json.html b/DiagnosticReport-diagnostic-report-1.json.html index e3cc8633..e15bbe86 100644 --- a/DiagnosticReport-diagnostic-report-1.json.html +++ b/DiagnosticReport-diagnostic-report-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -349,7 +349,7 @@ <h2 id="root">: diagnostic-report-1 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/DiagnosticReport-diagnostic-report-1.ttl b/DiagnosticReport-diagnostic-report-1.ttl index 63222f0e..616b2d25 100644 --- a/DiagnosticReport-diagnostic-report-1.ttl +++ b/DiagnosticReport-diagnostic-report-1.ttl @@ -8,11 +8,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/DiagnosticReport/diagnostic-report-1> a fhir:DiagnosticReport; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "diagnostic-report-1"]; + fhir:Resource.id [ fhir:value "diagnostic-report-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><h2><span title=\"Codes: {http://loinc.org 81247-9}\">Master HL7 genetic variant reporting panel</span> </h2><table class=\"grid\"><tr><td>Subject</td><td><b>Mariah Abigail Smith(OFFICIAL)</b> female, DoB: 2019-06-15</td></tr></table><p><b>Report Details</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Value</b></td></tr><tr><td><a href=\"Observation-variant-example-1.html\"><span title=\"Codes: {http://loinc.org 69548-6}\">Genetic variant assessment</span></a></td><td><span title=\"Codes: {http://loinc.org LA9633-4}\">Present</span></td></tr><tr><td><a href=\"Observation-diagnostic-implication-1.html\"><span title=\"Codes: {http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes diagnostic-implication}\">Diagnostic Implication</span></a></td><td/></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Extension.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info" ]; @@ -20,8 +20,8 @@ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Task/task-example-1>; fhir:Reference.reference [ fhir:value "Task/task-example-1" ] ] - ]; - fhir:DiagnosticReport.status [ fhir:value "final"]; + ]; # + fhir:DiagnosticReport.status [ fhir:value "final"]; # fhir:DiagnosticReport.code [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -30,11 +30,11 @@ fhir:Coding.code [ fhir:value "81247-9" ]; fhir:Coding.display [ fhir:value "Master HL7 genetic variant reporting panel" ] ] - ]; + ]; # fhir:DiagnosticReport.subject [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-1>; fhir:Reference.reference [ fhir:value "Patient/patient-example-1" ] - ]; + ]; # fhir:DiagnosticReport.result [ fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Observation/variant-example-1>; @@ -43,7 +43,7 @@ fhir:index 1; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Observation/diagnostic-implication-1>; fhir:Reference.reference [ fhir:value "Observation/diagnostic-implication-1" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/DiagnosticReport-diagnostic-report-1.ttl.html b/DiagnosticReport-diagnostic-report-1.ttl.html index 02a90be0..c207ea16 100644 --- a/DiagnosticReport-diagnostic-report-1.ttl.html +++ b/DiagnosticReport-diagnostic-report-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -293,18 +293,18 @@ <h2 id="root">: diagnostic-report-1 - TTL Representation</h2> a fhir:DiagnosticReport; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/diagnosticreport.html#DiagnosticReport.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "diagnostic-report-1"]; + <a href="http://hl7.org/fhir/R4/diagnosticreport.html#DiagnosticReport.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "diagnostic-report-1"]; # <a href="http://hl7.org/fhir/R4/diagnosticreport.html#DiagnosticReport.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><h2><span title=\"Codes: {http://loinc.org 81247-9}\">Master HL7 genetic variant reporting panel</span> </h2><table class=\"grid\"><tr><td>Subject</td><td><b>Mariah Abigail Smith(OFFICIAL)</b> female, DoB: 2019-06-15</td></tr></table><p><b>Report Details</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Value</b></td></tr><tr><td><a href=\"Observation-variant-example-1.html\"><span title=\"Codes: {http://loinc.org 69548-6}\">Genetic variant assessment</span></a></td><td><span title=\"Codes: {http://loinc.org LA9633-4}\">Present</span></td></tr><tr><td><a href=\"Observation-diagnostic-implication-1.html\"><span title=\"Codes: {http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes diagnostic-implication}\">Diagnostic Implication</span></a></td><td/></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/diagnosticreport.html#DiagnosticReport.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueReference</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Task/task-example-1" ] ] - ]; - <a href="http://hl7.org/fhir/R4/diagnosticreport.html#DiagnosticReport.status">fhir:DiagnosticReport.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; + ]; # + <a href="http://hl7.org/fhir/R4/diagnosticreport.html#DiagnosticReport.status">fhir:DiagnosticReport.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; # <a href="http://hl7.org/fhir/R4/diagnosticreport.html#DiagnosticReport.code">fhir:DiagnosticReport.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -312,17 +312,17 @@ <h2 id="root">: diagnostic-report-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://loinc.org" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "81247-9" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Master HL7 genetic variant reporting panel" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/diagnosticreport.html#DiagnosticReport.subject">fhir:DiagnosticReport.subject</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/patient-example-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/diagnosticreport.html#DiagnosticReport.result">fhir:DiagnosticReport.result</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Observation/variant-example-1" ] ], [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Observation/diagnostic-implication-1" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -360,7 +360,7 @@ <h2 id="root">: diagnostic-report-1 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/DiagnosticReport-diagnostic-report-1.xml.html b/DiagnosticReport-diagnostic-report-1.xml.html index 91befb45..6b5e9d77 100644 --- a/DiagnosticReport-diagnostic-report-1.xml.html +++ b/DiagnosticReport-diagnostic-report-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -343,7 +343,7 @@ <h2 id="root">: diagnostic-report-1 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/DocumentReference-drs-document-reference-example-1.change.history.html b/DocumentReference-drs-document-reference-example-1.change.history.html index 6aa4d0d5..17a7c16c 100644 --- a/DocumentReference-drs-document-reference-example-1.change.history.html +++ b/DocumentReference-drs-document-reference-example-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: DocumentReference/drs-document-reference-example-1 - Change Hist <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/DocumentReference-drs-document-reference-example-1.html b/DocumentReference-drs-document-reference-example-1.html index f31124aa..fe52c2a2 100644 --- a/DocumentReference-drs-document-reference-example-1.html +++ b/DocumentReference-drs-document-reference-example-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example DocumentReference: drs-document-reference-example-1</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/DocumentReference-drs-document-reference-example-1.json b/DocumentReference-drs-document-reference-example-1.json index 3a56c529..7caa4adc 100644 --- a/DocumentReference-drs-document-reference-example-1.json +++ b/DocumentReference-drs-document-reference-example-1.json @@ -1,21 +1,17 @@ -{ - "resourceType": "DocumentReference", - "id": "drs-document-reference-example-1", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-document-reference" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: DocumentReference</b><a name=\"drs-document-reference-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource DocumentReference "drs-document-reference-example-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-ncpi-drs-document-reference.html\">DRS Document Reference</a></p></div><p><b>status</b>: current</p><blockquote><p><b>content</b></p><h3>Attachments</h3><table class=\"grid\"><tr><td>-</td><td><b>Url</b></td></tr><tr><td>*</td><td><code>drs://example.com/ga4gh/drs/v1/objects/0f8c27b9-3300-4249-bb28-f49ffb80e277</code></td></tr></table></blockquote></div>" - }, - "status": "current", - "content": [ - { - "attachment": { - "url": "drs://example.com/ga4gh/drs/v1/objects/0f8c27b9-3300-4249-bb28-f49ffb80e277" - } - } - ] +{ + "resourceType" : "DocumentReference", + "id" : "drs-document-reference-example-1", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-document-reference"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: DocumentReference</b><a name=\"drs-document-reference-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource DocumentReference "drs-document-reference-example-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-ncpi-drs-document-reference.html\">DRS Document Reference</a></p></div><p><b>status</b>: current</p><blockquote><p><b>content</b></p><h3>Attachments</h3><table class=\"grid\"><tr><td>-</td><td><b>Url</b></td></tr><tr><td>*</td><td><code>drs://example.com/ga4gh/drs/v1/objects/0f8c27b9-3300-4249-bb28-f49ffb80e277</code></td></tr></table></blockquote></div>" + }, + "status" : "current", + "content" : [{ + "attachment" : { + "url" : "drs://example.com/ga4gh/drs/v1/objects/0f8c27b9-3300-4249-bb28-f49ffb80e277" + } + }] } \ No newline at end of file diff --git a/DocumentReference-drs-document-reference-example-1.json.html b/DocumentReference-drs-document-reference-example-1.json.html index 907ea025..fd58d983 100644 --- a/DocumentReference-drs-document-reference-example-1.json.html +++ b/DocumentReference-drs-document-reference-example-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -333,7 +333,7 @@ <h2 id="root">: drs-document-reference-example-1 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/DocumentReference-drs-document-reference-example-1.ttl b/DocumentReference-drs-document-reference-example-1.ttl index 7835f92d..06d12f52 100644 --- a/DocumentReference-drs-document-reference-example-1.ttl +++ b/DocumentReference-drs-document-reference-example-1.ttl @@ -7,25 +7,25 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/DocumentReference/drs-document-reference-example-1> a fhir:DocumentReference; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "drs-document-reference-example-1"]; + fhir:Resource.id [ fhir:value "drs-document-reference-example-1"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-document-reference"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-document-reference> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: DocumentReference</b><a name=\"drs-document-reference-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource DocumentReference "drs-document-reference-example-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-ncpi-drs-document-reference.html\">DRS Document Reference</a></p></div><p><b>status</b>: current</p><blockquote><p><b>content</b></p><h3>Attachments</h3><table class=\"grid\"><tr><td>-</td><td><b>Url</b></td></tr><tr><td>*</td><td><code>drs://example.com/ga4gh/drs/v1/objects/0f8c27b9-3300-4249-bb28-f49ffb80e277</code></td></tr></table></blockquote></div>" - ]; - fhir:DocumentReference.status [ fhir:value "current"]; + ]; # + fhir:DocumentReference.status [ fhir:value "current"]; # fhir:DocumentReference.content [ fhir:index 0; fhir:DocumentReference.content.attachment [ fhir:Attachment.url [ fhir:value "drs://example.com/ga4gh/drs/v1/objects/0f8c27b9-3300-4249-bb28-f49ffb80e277" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/DocumentReference-drs-document-reference-example-1.ttl.html b/DocumentReference-drs-document-reference-example-1.ttl.html index 257e9575..5582831c 100644 --- a/DocumentReference-drs-document-reference-example-1.ttl.html +++ b/DocumentReference-drs-document-reference-example-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,23 +292,23 @@ <h2 id="root">: drs-document-reference-example-1 - TTL Representation</h2> a fhir:DocumentReference; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "drs-document-reference-example-1"]; + <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "drs-document-reference-example-1"]; # <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-document-reference"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-document-reference> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: DocumentReference</b><a name=\"drs-document-reference-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource DocumentReference &quot;drs-document-reference-example-1&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-ncpi-drs-document-reference.html\">DRS Document Reference</a></p></div><p><b>status</b>: current</p><blockquote><p><b>content</b></p><h3>Attachments</h3><table class=\"grid\"><tr><td>-</td><td><b>Url</b></td></tr><tr><td>*</td><td><code>drs://example.com/ga4gh/drs/v1/objects/0f8c27b9-3300-4249-bb28-f49ffb80e277</code></td></tr></table></blockquote></div>" - ]; - <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.status">fhir:DocumentReference.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "current"]; + ]; # + <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.status">fhir:DocumentReference.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "current"]; # <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.content">fhir:DocumentReference.content</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.content.attachment">fhir:DocumentReference.content.attachment</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Attachment#Attachment.url">fhir:Attachment.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#url">fhir:value</a> "drs://example.com/ga4gh/drs/v1/objects/0f8c27b9-3300-4249-bb28-f49ffb80e277" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -346,7 +346,7 @@ <h2 id="root">: drs-document-reference-example-1 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/DocumentReference-drs-document-reference-example-1.xml.html b/DocumentReference-drs-document-reference-example-1.xml.html index a2351550..81dee3fd 100644 --- a/DocumentReference-drs-document-reference-example-1.xml.html +++ b/DocumentReference-drs-document-reference-example-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -331,7 +331,7 @@ <h2 id="root">: drs-document-reference-example-1 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/DocumentReference-research-document-reference-example-1.change.history.html b/DocumentReference-research-document-reference-example-1.change.history.html index 59ac2b18..5825dd70 100644 --- a/DocumentReference-research-document-reference-example-1.change.history.html +++ b/DocumentReference-research-document-reference-example-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: DocumentReference/research-document-reference-example-1 - Change <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/DocumentReference-research-document-reference-example-1.html b/DocumentReference-research-document-reference-example-1.html index 54391f6f..a0f8e16b 100644 --- a/DocumentReference-research-document-reference-example-1.html +++ b/DocumentReference-research-document-reference-example-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example DocumentReference: research-document-reference-example-1</ <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/DocumentReference-research-document-reference-example-1.json b/DocumentReference-research-document-reference-example-1.json index 81a95559..a6aece65 100644 --- a/DocumentReference-research-document-reference-example-1.json +++ b/DocumentReference-research-document-reference-example-1.json @@ -1,34 +1,28 @@ -{ - "resourceType": "DocumentReference", - "id": "research-document-reference-example-1", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-document-reference" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: DocumentReference</b><a name=\"research-document-reference-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource DocumentReference "research-document-reference-example-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-ncpi-research-document-reference.html\">Research Document Reference</a></p></div><p><b>status</b>: current</p><p><b>subject</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> " SMITH"</p><p><b>custodian</b>: <a href=\"Organization-organization-example-1.html\">Organization/organization-example-1</a> "Amazing Children's Hospital"</p><blockquote><p><b>content</b></p><h3>Attachments</h3><table class=\"grid\"><tr><td>-</td><td><b>Url</b></td></tr><tr><td>*</td><td><code>drs://example.com/ga4gh/drs/v1/objects/0f8c27b9-3300-4249-bb28-f49ffb80e277</code></td></tr></table></blockquote><h3>Contexts</h3><table class=\"grid\"><tr><td>-</td><td><b>Related</b></td></tr><tr><td>*</td><td><a href=\"Task-task-example-2.html\">Task/task-example-2</a></td></tr></table></div>" - }, - "status": "current", - "subject": { - "reference": "Patient/patient-example-3" - }, - "custodian": { - "reference": "Organization/organization-example-1" - }, - "content": [ - { - "attachment": { - "url": "drs://example.com/ga4gh/drs/v1/objects/0f8c27b9-3300-4249-bb28-f49ffb80e277" - } - } - ], - "context": { - "related": [ - { - "reference": "Task/task-example-2" - } - ] - } +{ + "resourceType" : "DocumentReference", + "id" : "research-document-reference-example-1", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-document-reference"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: DocumentReference</b><a name=\"research-document-reference-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource DocumentReference "research-document-reference-example-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-ncpi-research-document-reference.html\">Research Document Reference</a></p></div><p><b>status</b>: current</p><p><b>subject</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> " SMITH"</p><p><b>custodian</b>: <a href=\"Organization-organization-example-1.html\">Organization/organization-example-1</a> "Amazing Children's Hospital"</p><blockquote><p><b>content</b></p><h3>Attachments</h3><table class=\"grid\"><tr><td>-</td><td><b>Url</b></td></tr><tr><td>*</td><td><code>drs://example.com/ga4gh/drs/v1/objects/0f8c27b9-3300-4249-bb28-f49ffb80e277</code></td></tr></table></blockquote><h3>Contexts</h3><table class=\"grid\"><tr><td>-</td><td><b>Related</b></td></tr><tr><td>*</td><td><a href=\"Task-task-example-2.html\">Task/task-example-2</a></td></tr></table></div>" + }, + "status" : "current", + "subject" : { + "reference" : "Patient/patient-example-3" + }, + "custodian" : { + "reference" : "Organization/organization-example-1" + }, + "content" : [{ + "attachment" : { + "url" : "drs://example.com/ga4gh/drs/v1/objects/0f8c27b9-3300-4249-bb28-f49ffb80e277" + } + }], + "context" : { + "related" : [{ + "reference" : "Task/task-example-2" + }] + } } \ No newline at end of file diff --git a/DocumentReference-research-document-reference-example-1.json.html b/DocumentReference-research-document-reference-example-1.json.html index 4c1d105a..2fe37f3c 100644 --- a/DocumentReference-research-document-reference-example-1.json.html +++ b/DocumentReference-research-document-reference-example-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -346,7 +346,7 @@ <h2 id="root">: research-document-reference-example-1 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/DocumentReference-research-document-reference-example-1.ttl b/DocumentReference-research-document-reference-example-1.ttl index 7eafc4d6..abceb43d 100644 --- a/DocumentReference-research-document-reference-example-1.ttl +++ b/DocumentReference-research-document-reference-example-1.ttl @@ -7,40 +7,40 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/DocumentReference/research-document-reference-example-1> a fhir:DocumentReference; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "research-document-reference-example-1"]; + fhir:Resource.id [ fhir:value "research-document-reference-example-1"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-document-reference"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-document-reference> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: DocumentReference</b><a name=\"research-document-reference-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource DocumentReference "research-document-reference-example-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-ncpi-research-document-reference.html\">Research Document Reference</a></p></div><p><b>status</b>: current</p><p><b>subject</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> " SMITH"</p><p><b>custodian</b>: <a href=\"Organization-organization-example-1.html\">Organization/organization-example-1</a> "Amazing Children's Hospital"</p><blockquote><p><b>content</b></p><h3>Attachments</h3><table class=\"grid\"><tr><td>-</td><td><b>Url</b></td></tr><tr><td>*</td><td><code>drs://example.com/ga4gh/drs/v1/objects/0f8c27b9-3300-4249-bb28-f49ffb80e277</code></td></tr></table></blockquote><h3>Contexts</h3><table class=\"grid\"><tr><td>-</td><td><b>Related</b></td></tr><tr><td>*</td><td><a href=\"Task-task-example-2.html\">Task/task-example-2</a></td></tr></table></div>" - ]; - fhir:DocumentReference.status [ fhir:value "current"]; + ]; # + fhir:DocumentReference.status [ fhir:value "current"]; # fhir:DocumentReference.subject [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-3>; fhir:Reference.reference [ fhir:value "Patient/patient-example-3" ] - ]; + ]; # fhir:DocumentReference.custodian [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Organization/organization-example-1>; fhir:Reference.reference [ fhir:value "Organization/organization-example-1" ] - ]; + ]; # fhir:DocumentReference.content [ fhir:index 0; fhir:DocumentReference.content.attachment [ fhir:Attachment.url [ fhir:value "drs://example.com/ga4gh/drs/v1/objects/0f8c27b9-3300-4249-bb28-f49ffb80e277" ] ] - ]; + ]; # fhir:DocumentReference.context [ fhir:DocumentReference.context.related [ fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Task/task-example-2>; fhir:Reference.reference [ fhir:value "Task/task-example-2" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/DocumentReference-research-document-reference-example-1.ttl.html b/DocumentReference-research-document-reference-example-1.ttl.html index 689802fc..a37470ec 100644 --- a/DocumentReference-research-document-reference-example-1.ttl.html +++ b/DocumentReference-research-document-reference-example-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,34 +292,34 @@ <h2 id="root">: research-document-reference-example-1 - TTL Representation</h2> a fhir:DocumentReference; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "research-document-reference-example-1"]; + <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "research-document-reference-example-1"]; # <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-document-reference"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-document-reference> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: DocumentReference</b><a name=\"research-document-reference-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource DocumentReference &quot;research-document-reference-example-1&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-ncpi-research-document-reference.html\">Research Document Reference</a></p></div><p><b>status</b>: current</p><p><b>subject</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> &quot; SMITH&quot;</p><p><b>custodian</b>: <a href=\"Organization-organization-example-1.html\">Organization/organization-example-1</a> &quot;Amazing Children's Hospital&quot;</p><blockquote><p><b>content</b></p><h3>Attachments</h3><table class=\"grid\"><tr><td>-</td><td><b>Url</b></td></tr><tr><td>*</td><td><code>drs://example.com/ga4gh/drs/v1/objects/0f8c27b9-3300-4249-bb28-f49ffb80e277</code></td></tr></table></blockquote><h3>Contexts</h3><table class=\"grid\"><tr><td>-</td><td><b>Related</b></td></tr><tr><td>*</td><td><a href=\"Task-task-example-2.html\">Task/task-example-2</a></td></tr></table></div>" - ]; - <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.status">fhir:DocumentReference.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "current"]; + ]; # + <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.status">fhir:DocumentReference.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "current"]; # <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.subject">fhir:DocumentReference.subject</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/patient-example-3" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.custodian">fhir:DocumentReference.custodian</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Organization/organization-example-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.content">fhir:DocumentReference.content</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.content.attachment">fhir:DocumentReference.content.attachment</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Attachment#Attachment.url">fhir:Attachment.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#url">fhir:value</a> "drs://example.com/ga4gh/drs/v1/objects/0f8c27b9-3300-4249-bb28-f49ffb80e277" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.context">fhir:DocumentReference.context</a> [ <a href="http://hl7.org/fhir/R4/documentreference.html#DocumentReference.context.related">fhir:DocumentReference.context.related</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Task/task-example-2" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -357,7 +357,7 @@ <h2 id="root">: research-document-reference-example-1 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/DocumentReference-research-document-reference-example-1.xml.html b/DocumentReference-research-document-reference-example-1.xml.html index 78c0db81..e4dfcfd9 100644 --- a/DocumentReference-research-document-reference-example-1.xml.html +++ b/DocumentReference-research-document-reference-example-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -342,7 +342,7 @@ <h2 id="root">: research-document-reference-example-1 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Encounter-example-encounter-study-01-patient-01.change.history.html b/Encounter-example-encounter-study-01-patient-01.change.history.html index 0d606761..3812de4e 100644 --- a/Encounter-example-encounter-study-01-patient-01.change.history.html +++ b/Encounter-example-encounter-study-01-patient-01.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Encounter/example-encounter-study-01-patient-01 - Change History <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Encounter-example-encounter-study-01-patient-01.html b/Encounter-example-encounter-study-01-patient-01.html index 2f940a9a..6c6b1870 100644 --- a/Encounter-example-encounter-study-01-patient-01.html +++ b/Encounter-example-encounter-study-01-patient-01.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Encounter: Example Encounter Study 01 Patient 01</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Encounter-example-encounter-study-01-patient-01.json b/Encounter-example-encounter-study-01-patient-01.json index f8f3c67a..03d59c87 100644 --- a/Encounter-example-encounter-study-01-patient-01.json +++ b/Encounter-example-encounter-study-01-patient-01.json @@ -1,17 +1,17 @@ -{ - "resourceType": "Encounter", - "id": "example-encounter-study-01-patient-01", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Encounter</b><a name=\"example-encounter-study-01-patient-01\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Encounter "example-encounter-study-01-patient-01" </p></div><p><b>status</b>: finished</p><p><b>class</b>: Survey Completed by Subject or someone representing them (Details: http://example.org/my-dataset/fhir/codesystem/research-encounter-class code survey = 'survey', stated as 'Survey Completed by Subject or someone representing them')</p><p><b>subject</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p></div>" - }, - "status": "finished", - "class": { - "system": "http://example.org/my-dataset/fhir/codesystem/research-encounter-class", - "code": "survey", - "display": "Survey Completed by Subject or someone representing them" - }, - "subject": { - "reference": "Patient/ncpi-research-study-01-patient-01" - } +{ + "resourceType" : "Encounter", + "id" : "example-encounter-study-01-patient-01", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Encounter</b><a name=\"example-encounter-study-01-patient-01\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Encounter "example-encounter-study-01-patient-01" </p></div><p><b>status</b>: finished</p><p><b>class</b>: Survey Completed by Subject or someone representing them (Details: http://example.org/my-dataset/fhir/codesystem/research-encounter-class code survey = 'survey', stated as 'Survey Completed by Subject or someone representing them')</p><p><b>subject</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p></div>" + }, + "status" : "finished", + "class" : { + "system" : "http://example.org/my-dataset/fhir/codesystem/research-encounter-class", + "code" : "survey", + "display" : "Survey Completed by Subject or someone representing them" + }, + "subject" : { + "reference" : "Patient/ncpi-research-study-01-patient-01" + } } \ No newline at end of file diff --git a/Encounter-example-encounter-study-01-patient-01.json.html b/Encounter-example-encounter-study-01-patient-01.json.html index 444b5775..96b93f13 100644 --- a/Encounter-example-encounter-study-01-patient-01.json.html +++ b/Encounter-example-encounter-study-01-patient-01.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -329,7 +329,7 @@ <h2 id="root">: Example Encounter Study 01 Patient 01 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Encounter-example-encounter-study-01-patient-01.ttl b/Encounter-example-encounter-study-01-patient-01.ttl index f4c3c743..175c06c2 100644 --- a/Encounter-example-encounter-study-01-patient-01.ttl +++ b/Encounter-example-encounter-study-01-patient-01.ttl @@ -7,21 +7,21 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Encounter/example-encounter-study-01-patient-01> a fhir:Encounter; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "example-encounter-study-01-patient-01"]; + fhir:Resource.id [ fhir:value "example-encounter-study-01-patient-01"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Encounter</b><a name=\"example-encounter-study-01-patient-01\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Encounter "example-encounter-study-01-patient-01" </p></div><p><b>status</b>: finished</p><p><b>class</b>: Survey Completed by Subject or someone representing them (Details: http://example.org/my-dataset/fhir/codesystem/research-encounter-class code survey = 'survey', stated as 'Survey Completed by Subject or someone representing them')</p><p><b>subject</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p></div>" - ]; - fhir:Encounter.status [ fhir:value "finished"]; + ]; # + fhir:Encounter.status [ fhir:value "finished"]; # fhir:Encounter.class [ fhir:Coding.system [ fhir:value "http://example.org/my-dataset/fhir/codesystem/research-encounter-class" ]; fhir:Coding.code [ fhir:value "survey" ]; fhir:Coding.display [ fhir:value "Survey Completed by Subject or someone representing them" ] - ]; + ]; # fhir:Encounter.subject [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/ncpi-research-study-01-patient-01>; fhir:Reference.reference [ fhir:value "Patient/ncpi-research-study-01-patient-01" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Encounter-example-encounter-study-01-patient-01.ttl.html b/Encounter-example-encounter-study-01-patient-01.ttl.html index 7afeb827..3dc98252 100644 --- a/Encounter-example-encounter-study-01-patient-01.ttl.html +++ b/Encounter-example-encounter-study-01-patient-01.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,20 +292,20 @@ <h2 id="root">: Example Encounter Study 01 Patient 01 - TTL Representation</h2> a fhir:Encounter; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/encounter.html#Encounter.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "example-encounter-study-01-patient-01"]; + <a href="http://hl7.org/fhir/R4/encounter.html#Encounter.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "example-encounter-study-01-patient-01"]; # <a href="http://hl7.org/fhir/R4/encounter.html#Encounter.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Encounter</b><a name=\"example-encounter-study-01-patient-01\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Encounter &quot;example-encounter-study-01-patient-01&quot; </p></div><p><b>status</b>: finished</p><p><b>class</b>: Survey Completed by Subject or someone representing them (Details: http://example.org/my-dataset/fhir/codesystem/research-encounter-class code survey = 'survey', stated as 'Survey Completed by Subject or someone representing them')</p><p><b>subject</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p></div>" - ]; - <a href="http://hl7.org/fhir/R4/encounter.html#Encounter.status">fhir:Encounter.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "finished"]; + ]; # + <a href="http://hl7.org/fhir/R4/encounter.html#Encounter.status">fhir:Encounter.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "finished"]; # <a href="http://hl7.org/fhir/R4/encounter.html#Encounter.class">fhir:Encounter.class</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://example.org/my-dataset/fhir/codesystem/research-encounter-class" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "survey" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Survey Completed by Subject or someone representing them" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/encounter.html#Encounter.subject">fhir:Encounter.subject</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/ncpi-research-study-01-patient-01" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -343,7 +343,7 @@ <h2 id="root">: Example Encounter Study 01 Patient 01 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Encounter-example-encounter-study-01-patient-01.xml.html b/Encounter-example-encounter-study-01-patient-01.xml.html index 2ccc8c47..be8a6801 100644 --- a/Encounter-example-encounter-study-01-patient-01.xml.html +++ b/Encounter-example-encounter-study-01-patient-01.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -331,7 +331,7 @@ <h2 id="root">: Example Encounter Study 01 Patient 01 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/FHIR_Basics.html b/FHIR_Basics.html index a188d642..f7aca3fb 100644 --- a/FHIR_Basics.html +++ b/FHIR_Basics.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -303,7 +303,7 @@ <h4 id="conceptmap">ConceptMap</h4> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Group-example-summary-group-1.change.history.html b/Group-example-summary-group-1.change.history.html index 218a1ca9..fa061ccf 100644 --- a/Group-example-summary-group-1.change.history.html +++ b/Group-example-summary-group-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Group/example-summary-group-1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Group-example-summary-group-1.html b/Group-example-summary-group-1.html index d341e309..2b869d76 100644 --- a/Group-example-summary-group-1.html +++ b/Group-example-summary-group-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Group: Example Group used for Summary Results</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Group-example-summary-group-1.json b/Group-example-summary-group-1.json index 6f92d83e..ef9e9187 100644 --- a/Group-example-summary-group-1.json +++ b/Group-example-summary-group-1.json @@ -1,16 +1,14 @@ -{ - "resourceType": "Group", - "id": "example-summary-group-1", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Group</b><a name=\"example-summary-group-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Group "example-summary-group-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a></p></div><p><b>type</b>: person</p><p><b>actual</b>: true</p><p><b>quantity</b>: 400</p></div>" - }, - "type": "person", - "actual": true, - "quantity": 400 +{ + "resourceType" : "Group", + "id" : "example-summary-group-1", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Group</b><a name=\"example-summary-group-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Group "example-summary-group-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a></p></div><p><b>type</b>: person</p><p><b>actual</b>: true</p><p><b>quantity</b>: 400</p></div>" + }, + "type" : "person", + "actual" : true, + "quantity" : 400 } \ No newline at end of file diff --git a/Group-example-summary-group-1.json.html b/Group-example-summary-group-1.json.html index 7ec54f91..088ef8fb 100644 --- a/Group-example-summary-group-1.json.html +++ b/Group-example-summary-group-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -328,7 +328,7 @@ <h2 id="root">: Example Group used for Summary Results - JSON Representation</h2 <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Group-example-summary-group-1.ttl b/Group-example-summary-group-1.ttl index 065cb45d..7fa343c2 100644 --- a/Group-example-summary-group-1.ttl +++ b/Group-example-summary-group-1.ttl @@ -7,21 +7,21 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Group/example-summary-group-1> a fhir:Group; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "example-summary-group-1"]; + fhir:Resource.id [ fhir:value "example-summary-group-1"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Group</b><a name=\"example-summary-group-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Group "example-summary-group-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a></p></div><p><b>type</b>: person</p><p><b>actual</b>: true</p><p><b>quantity</b>: 400</p></div>" - ]; - fhir:Group.type [ fhir:value "person"]; - fhir:Group.actual [ fhir:value "true"^^xsd:boolean]; - fhir:Group.quantity [ fhir:value "400"^^xsd:nonNegativeInteger] . + ]; # + fhir:Group.type [ fhir:value "person"]; # + fhir:Group.actual [ fhir:value "true"^^xsd:boolean]; # + fhir:Group.quantity [ fhir:value "400"^^xsd:nonNegativeInteger] . # # - ontology header ------------------------------------------------------------ diff --git a/Group-example-summary-group-1.ttl.html b/Group-example-summary-group-1.ttl.html index ac653d08..b88e1cc2 100644 --- a/Group-example-summary-group-1.ttl.html +++ b/Group-example-summary-group-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,20 +292,20 @@ <h2 id="root">: Example Group used for Summary Results - TTL Representation</h2> a fhir:Group; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/group.html#Group.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "example-summary-group-1"]; + <a href="http://hl7.org/fhir/R4/group.html#Group.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "example-summary-group-1"]; # <a href="http://hl7.org/fhir/R4/group.html#Group.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/group.html#Group.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Group</b><a name=\"example-summary-group-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Group &quot;example-summary-group-1&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a></p></div><p><b>type</b>: person</p><p><b>actual</b>: true</p><p><b>quantity</b>: 400</p></div>" - ]; - <a href="http://hl7.org/fhir/R4/group.html#Group.type">fhir:Group.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "person"]; - <a href="http://hl7.org/fhir/R4/group.html#Group.actual">fhir:Group.actual</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/group.html#Group.quantity">fhir:Group.quantity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "400"^^xsd:nonNegativeInteger]. + ]; # + <a href="http://hl7.org/fhir/R4/group.html#Group.type">fhir:Group.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "person"]; # + <a href="http://hl7.org/fhir/R4/group.html#Group.actual">fhir:Group.actual</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/group.html#Group.quantity">fhir:Group.quantity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "400"^^xsd:nonNegativeInteger]. # # - ontology header ------------------------------------------------------------ @@ -343,7 +343,7 @@ <h2 id="root">: Example Group used for Summary Results - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Group-example-summary-group-1.xml.html b/Group-example-summary-group-1.xml.html index c2681c17..d988685a 100644 --- a/Group-example-summary-group-1.xml.html +++ b/Group-example-summary-group-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -327,7 +327,7 @@ <h2 id="root">: Example Group used for Summary Results - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Group-ncpi-research-study-01-group-01-main.change.history.html b/Group-ncpi-research-study-01-group-01-main.change.history.html index 9409e243..f1043ae9 100644 --- a/Group-ncpi-research-study-01-group-01-main.change.history.html +++ b/Group-ncpi-research-study-01-group-01-main.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Study 01's participants - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Group-ncpi-research-study-01-group-01-main.html b/Group-ncpi-research-study-01-group-01-main.html index 6f5b5fa7..115a9678 100644 --- a/Group-ncpi-research-study-01-group-01-main.html +++ b/Group-ncpi-research-study-01-group-01-main.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Group: ncpi-research-study-01-group-01-main</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Group-ncpi-research-study-01-group-01-main.json b/Group-ncpi-research-study-01-group-01-main.json index d42657eb..08194aea 100644 --- a/Group-ncpi-research-study-01-group-01-main.json +++ b/Group-ncpi-research-study-01-group-01-main.json @@ -1,29 +1,25 @@ -{ - "resourceType": "Group", - "id": "ncpi-research-study-01-group-01-main", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Group</b><a name=\"ncpi-research-study-01-group-01-main\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Group "ncpi-research-study-01-group-01-main" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a></p></div><p><b>type</b>: person</p><p><b>actual</b>: true</p><p><b>name</b>: Study 01's participants</p><p><b>quantity</b>: 2</p><blockquote><p><b>member</b></p><p><b>entity</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p></blockquote><blockquote><p><b>member</b></p><p><b>entity</b>: <a href=\"Patient-ncpi-research-study-01-patient-02.html\">Patient/ncpi-research-study-01-patient-02</a></p></blockquote></div>" - }, - "type": "person", - "actual": true, - "name": "Study 01's participants", - "quantity": 2, - "member": [ - { - "entity": { - "reference": "Patient/ncpi-research-study-01-patient-01" - } - }, - { - "entity": { - "reference": "Patient/ncpi-research-study-01-patient-02" - } - } - ] +{ + "resourceType" : "Group", + "id" : "ncpi-research-study-01-group-01-main", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Group</b><a name=\"ncpi-research-study-01-group-01-main\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Group "ncpi-research-study-01-group-01-main" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a></p></div><p><b>type</b>: person</p><p><b>actual</b>: true</p><p><b>name</b>: Study 01's participants</p><p><b>quantity</b>: 2</p><blockquote><p><b>member</b></p><p><b>entity</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p></blockquote><blockquote><p><b>member</b></p><p><b>entity</b>: <a href=\"Patient-ncpi-research-study-01-patient-02.html\">Patient/ncpi-research-study-01-patient-02</a></p></blockquote></div>" + }, + "type" : "person", + "actual" : true, + "name" : "Study 01's participants", + "quantity" : 2, + "member" : [{ + "entity" : { + "reference" : "Patient/ncpi-research-study-01-patient-01" + } + }, + { + "entity" : { + "reference" : "Patient/ncpi-research-study-01-patient-02" + } + }] } \ No newline at end of file diff --git a/Group-ncpi-research-study-01-group-01-main.json.html b/Group-ncpi-research-study-01-group-01-main.json.html index 1eec4321..4426ea1d 100644 --- a/Group-ncpi-research-study-01-group-01-main.json.html +++ b/Group-ncpi-research-study-01-group-01-main.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -341,7 +341,7 @@ <h2 id="root">: ncpi-research-study-01-group-01-main - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Group-ncpi-research-study-01-group-01-main.ttl b/Group-ncpi-research-study-01-group-01-main.ttl index a78fe133..dec02e32 100644 --- a/Group-ncpi-research-study-01-group-01-main.ttl +++ b/Group-ncpi-research-study-01-group-01-main.ttl @@ -7,22 +7,22 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Group/ncpi-research-study-01-group-01-main> a fhir:Group; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "ncpi-research-study-01-group-01-main"]; + fhir:Resource.id [ fhir:value "ncpi-research-study-01-group-01-main"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Group</b><a name=\"ncpi-research-study-01-group-01-main\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Group "ncpi-research-study-01-group-01-main" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a></p></div><p><b>type</b>: person</p><p><b>actual</b>: true</p><p><b>name</b>: Study 01's participants</p><p><b>quantity</b>: 2</p><blockquote><p><b>member</b></p><p><b>entity</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p></blockquote><blockquote><p><b>member</b></p><p><b>entity</b>: <a href=\"Patient-ncpi-research-study-01-patient-02.html\">Patient/ncpi-research-study-01-patient-02</a></p></blockquote></div>" - ]; - fhir:Group.type [ fhir:value "person"]; - fhir:Group.actual [ fhir:value "true"^^xsd:boolean]; - fhir:Group.name [ fhir:value "Study 01's participants"]; - fhir:Group.quantity [ fhir:value "2"^^xsd:nonNegativeInteger]; + ]; # + fhir:Group.type [ fhir:value "person"]; # + fhir:Group.actual [ fhir:value "true"^^xsd:boolean]; # + fhir:Group.name [ fhir:value "Study 01's participants"]; # + fhir:Group.quantity [ fhir:value "2"^^xsd:nonNegativeInteger]; # fhir:Group.member [ fhir:index 0; fhir:Group.member.entity [ @@ -35,7 +35,7 @@ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/ncpi-research-study-01-patient-02>; fhir:Reference.reference [ fhir:value "Patient/ncpi-research-study-01-patient-02" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Group-ncpi-research-study-01-group-01-main.ttl.html b/Group-ncpi-research-study-01-group-01-main.ttl.html index 0cd843d0..cd4380c7 100644 --- a/Group-ncpi-research-study-01-group-01-main.ttl.html +++ b/Group-ncpi-research-study-01-group-01-main.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,21 +292,21 @@ <h2 id="root">: ncpi-research-study-01-group-01-main - TTL Representation</h2> a fhir:Group; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/group.html#Group.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "ncpi-research-study-01-group-01-main"]; + <a href="http://hl7.org/fhir/R4/group.html#Group.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "ncpi-research-study-01-group-01-main"]; # <a href="http://hl7.org/fhir/R4/group.html#Group.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/group.html#Group.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Group</b><a name=\"ncpi-research-study-01-group-01-main\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Group &quot;ncpi-research-study-01-group-01-main&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a></p></div><p><b>type</b>: person</p><p><b>actual</b>: true</p><p><b>name</b>: Study 01's participants</p><p><b>quantity</b>: 2</p><blockquote><p><b>member</b></p><p><b>entity</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p></blockquote><blockquote><p><b>member</b></p><p><b>entity</b>: <a href=\"Patient-ncpi-research-study-01-patient-02.html\">Patient/ncpi-research-study-01-patient-02</a></p></blockquote></div>" - ]; - <a href="http://hl7.org/fhir/R4/group.html#Group.type">fhir:Group.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "person"]; - <a href="http://hl7.org/fhir/R4/group.html#Group.actual">fhir:Group.actual</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/group.html#Group.name">fhir:Group.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Study 01's participants"]; - <a href="http://hl7.org/fhir/R4/group.html#Group.quantity">fhir:Group.quantity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "2"^^xsd:nonNegativeInteger]; + ]; # + <a href="http://hl7.org/fhir/R4/group.html#Group.type">fhir:Group.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "person"]; # + <a href="http://hl7.org/fhir/R4/group.html#Group.actual">fhir:Group.actual</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/group.html#Group.name">fhir:Group.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Study 01's participants"]; # + <a href="http://hl7.org/fhir/R4/group.html#Group.quantity">fhir:Group.quantity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "2"^^xsd:nonNegativeInteger]; # <a href="http://hl7.org/fhir/R4/group.html#Group.member">fhir:Group.member</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/group.html#Group.member.entity">fhir:Group.member.entity</a> [ @@ -315,7 +315,7 @@ <h2 id="root">: ncpi-research-study-01-group-01-main - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/group.html#Group.member.entity">fhir:Group.member.entity</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/ncpi-research-study-01-patient-02" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -353,7 +353,7 @@ <h2 id="root">: ncpi-research-study-01-group-01-main - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Group-ncpi-research-study-01-group-01-main.xml.html b/Group-ncpi-research-study-01-group-01-main.xml.html index 702f2cfb..8144ef4b 100644 --- a/Group-ncpi-research-study-01-group-01-main.xml.html +++ b/Group-ncpi-research-study-01-group-01-main.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -338,7 +338,7 @@ <h2 id="root">: ncpi-research-study-01-group-01-main - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ImplementationGuide-NCPI-FHIR-Implementation-Guide.json b/ImplementationGuide-NCPI-FHIR-Implementation-Guide.json index 5201876b..ede63b50 100644 --- a/ImplementationGuide-NCPI-FHIR-Implementation-Guide.json +++ b/ImplementationGuide-NCPI-FHIR-Implementation-Guide.json @@ -1,2254 +1,1912 @@ -{ - "resourceType": "ImplementationGuide", - "id": "NCPI-FHIR-Implementation-Guide", - "text": { - "status": "extensions", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><h2>NCPIFHIRImplementationGuide</h2><p>The official URL for this implementation guide is: </p><pre>https://nih-ncpi.github.io/ncpi-fhir-ig/ImplementationGuide/NCPI-FHIR-Implementation-Guide</pre><div><p>FHIR Implementation Guide for the NIH Cloud Platform Interoperability Effort (NCPI).</p>\n</div></div>" - }, - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ImplementationGuide/NCPI-FHIR-Implementation-Guide", - "version": "0.2.0", - "name": "NCPIFHIRImplementationGuide", - "title": "NCPI FHIR Implementation Guide", - "status": "draft", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "FHIR Implementation Guide for the NIH Cloud Platform Interoperability Effort (NCPI).", - "packageId": "NCPI-FHIR-Implementation-Guide", - "license": "CC0-1.0", - "fhirVersion": [ - "4.0.1" - ], - "dependsOn": [ - { - "id": "hl7tx", - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/implementationguide-dependency-comment", - "valueMarkdown": "Automatically added as a dependency - all IGs depend on HL7 Terminology" - } - ], - "uri": "http://terminology.hl7.org/ImplementationGuide/hl7.terminology", - "packageId": "hl7.terminology.r4", - "version": "5.0.0" - }, - { - "id": "hl7_fhir_us_core", - "uri": "http://hl7.org/fhir/us/core/ImplementationGuide/hl7.fhir.us.core", - "packageId": "hl7.fhir.us.core", - "version": "3.1.1" - } - ], - "definition": { - "extension": [ - { - "extension": [ - { - "url": "code", - "valueString": "copyrightyear" - }, - { - "url": "value", - "valueString": "2021+" - } - ], - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-parameter" - }, - { - "extension": [ - { - "url": "code", - "valueString": "releaselabel" - }, - { - "url": "value", - "valueString": "ci-build" - } - ], - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-parameter" - }, - { - "extension": [ - { - "url": "code", - "valueString": "autoload-resources" - }, - { - "url": "value", - "valueString": "true" - } - ], - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-parameter" - 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}, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "StructureDefinition:resource" - } - ], - "reference": { - "reference": "StructureDefinition/ncpi-drs-document-reference" - }, - "name": "DRS Document Reference", - "description": "A FHIR Document Reference with an embedded DRS URI. See https://github.com/ga4gh/data-repository-service-schemas.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "StructureDefinition:resource" - } - ], - "reference": { - "reference": "StructureDefinition/disease" - }, - "name": "NCPI Disease", - "description": "Representation for a disease under study for a given research dataset.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "StructureDefinition:resource" - } - ], - "reference": { - "reference": "StructureDefinition/family-relationship" - }, - "name": "NCPI Family Relationship", - "description": "Representation of a family relationship.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "StructureDefinition:resource" - } - ], - "reference": { - "reference": "StructureDefinition/ncpi-research-study" - }, - "name": "NCPI Research Study", - "description": "The NCPI Research Study is based upon the core FHIR ResearchStudy resource and shall act as the umbrella under which all study resources can ultimately be found. For the purposes of interoperability, some restrictions have been made to enforce a common mechanism for describing enrollment and provide a simple means for summarizing subject count and consent group membership.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "StructureDefinition:resource" - } - ], - "reference": { - "reference": "StructureDefinition/phenotype" - }, - "name": "NCPI Phenotype", - "description": "Representation of phenotypic observations (present or absent)", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "StructureDefinition:resource" - } - ], - "reference": { - "reference": "StructureDefinition/raw-data-observation" - }, - "name": "Raw Data Observation", - "description": "Representation for a row of data from one of the dataset's tables.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "StructureDefinition:resource" - } - ], - "reference": { - "reference": "StructureDefinition/ncpi-research-document-reference" - }, - "name": "Research Document Reference", - "description": "A FHIR Document Reference created by an analysis task. Context.related = Task ", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "StructureDefinition:resource" - } - ], - "reference": { - "reference": "StructureDefinition/ncpi-specimen-task" - }, - "name": "Research Task", - "description": "A FHIR analysis task that takes at least one specimen as input and produces at least one document.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "StructureDefinition:resource" - } - ], - "reference": { - "reference": "StructureDefinition/study-data-dictionary-harmony" - }, - "name": "NCPI Data Dictionary Harmony", - "description": "Based on the FHIR resource type, ConceptMap, the StudyDataDictionaryHarmony resource provides insight into the transformations made during the ETL from source data into FHIR allowing clients to use the $translate function to discover all of the public codes that were mapped from one of the study's actual vocabulary.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "StructureDefinition:resource" - } - ], - "reference": { - "reference": "StructureDefinition/study-data-dictionary-table" - }, - "name": "NCPI Study Data Dictionary Data Table", - "description": "Aggregates Variable Details associated with a single dataset table that are represented in FHIR as as list of references to StudyDataDictionaryVariables in the *observationResultRequirement* property.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "StructureDefinition:resource" - } - ], - "reference": { - "reference": "StructureDefinition/study-data-dictionary-variable" - }, - "name": "NCPI Study Data Dictionary Data Variable", - "description": "FHIR profile used to describe single variable from the dataset. This resource should be as complete as possible including details such as *description*, *data-type*, *permitted enumerations*, *quantity units*, etc.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "StructureDefinition:resource" - } - ], - "reference": { - "reference": "StructureDefinition/study-group" - }, - "name": "NCPI Study Group", - "description": "Grouping subject participation within a research study is helpful to provide definitive lists of participants that fit a specific criteria such as *All Participants* or *Participants From a Particular Consent Group*, etc. ", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "StructureDefinition:resource" - } - ], - "reference": { - "reference": "StructureDefinition/study-summary" - }, - "name": "Study Summary", - "description": "An observation containing summary information about a study in it's entirety or one of it's subpopulations.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "StructureDefinition:resource" - } - ], - "reference": { - "reference": "StructureDefinition/study-variable-summary" - }, - "name": "Study Variable Summary", - "description": "An observation containing summary data associated with research data from FHIR.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "StructureDefinition:extension" - } - ], - "reference": { - "reference": "StructureDefinition/supporting-info" - }, - "name": "Supporting Information", - "description": "Additional information relevant to interpreting/understanding the report.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ValueSet" - } - ], - "reference": { - "reference": "ValueSet/condition-inheritance-vs" - }, - "name": "Condition Inheritance Pattern", - "description": "Value Set for specific ttransmission patterns of a condition in a pedigree", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ValueSet" - } - ], - "reference": { - "reference": "ValueSet/disease-codes" - }, - "name": "Disease Codes", - "description": "This value set includes all codes from this FHIR server's representation of OMIM, Mondo and NICt CodeSystems.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ValueSet" - } - ], - "reference": { - "reference": "ValueSet/example-study-data-dictionary-case-control-vs-1" - }, - "name": "Case/Control Vars for 'status' categoricals", - "description": "Example ValueSet listing all possible 'values' from the Case/Control variable.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ValueSet" - } - ], - "reference": { - "reference": "ValueSet/datatable-mappings-valueset-1" - }, - "name": "Harmonized ValueSet for data table", - "description": "Public codes mapped from example dataset\n\nThe codes used below were chosen purely for example's sake and are in no way an endorsement or suggestion for terms that should be used in a real data-dictionary.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ValueSet" - } - ], - "reference": { - "reference": "ValueSet/datatable-valueset-1" - }, - "name": "Table ValueSet", - "description": "Example Data Table with 4 variables", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ValueSet" - } - ], - "reference": { - "reference": "ValueSet/loinc-answers" - }, - "name": "LOINC Answers", - "description": "LOINC ANSWERS used by NCPI resources", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ValueSet" - } - ], - "reference": { - "reference": "ValueSet/ncpi-vs" - }, - "name": "NCPI FHIR Codes", - "description": "Codes that would apply to NCPI projects", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ValueSet" - } - ], - "reference": { - "reference": "ValueSet/phenotype-codes" - }, - "name": "Phenotype Codes", - "description": "This value set includes all codes from Human Phenotype Ontology.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ValueSet" - } - ], - "reference": { - "reference": "ValueSet/tbd-codes" - }, - "name": "tbd-codes", - "description": "This value set includes all TBD Codes", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "CodeSystem" - } - ], - "reference": { - "reference": "CodeSystem/ConditionInheritanceMode" - }, - "name": "Condition Inheritance Pattern", - "description": "A set of terms that describe the transmission pattern of a condition in a pedigree.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "CodeSystem" - } - ], - "reference": { - "reference": "CodeSystem/example-study-data-dictionary-dataset-codesystem-1" - }, - "name": "Dataset CodeSystem (lists all tables)", - "description": "Example CodeSystem for a data-dictionary dataset with only 1 table.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "CodeSystem" - } - ], - "reference": { - "reference": "CodeSystem/example-study-data-dictionary-datatable-codesystem-1" - }, - "name": "Datatable CodeSystem (lists all variables)", - "description": "Example CodeSystem for a data-dictionary table with 4 variables represented as codes.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "CodeSystem" - } - ], - "reference": { - "reference": "CodeSystem/hpo" - }, - "name": "Human Phenotype Ontology", - "description": "The Human Phenotype Ontology (HPO) provides a standardized vocabulary of phenotypic abnormalities encountered in human disease. Please see license of HPO at http://www.human-phenotype-ontology.org", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "CodeSystem" - } - ], - "reference": { - "reference": "CodeSystem/v3-hgvs" - }, - "name": "Human Genome Variation Society nomenclature", - "description": "HGVS nomenclatures are the guidelines for mutation nomenclature made by the Human Genome Variation Society.\n\nHGVS nomenclature can be used with the HL7 coded data type (code data type that accepts expression data, or a coded expression data type). This coded data type should be able to distinguish expressions in HGVS nomenclature from coded concepts. For example, in the HL7 messages specified according to the HL7 V2 Clinical Genomics Fully LOINC-Qualified Genetic Variation Model, HGVS nomenclature can be used to as the observation values for DNA sequence variations. For example, OBX|1|CWE|48004-6^DNA Sequence Variation^LN||c.1129C>T^^HGVS|\n\nVersioning information: The HGVS nomenclature for the description of sequence variants was last modified Feb 20, 2008. The HGVS nomenclature for the description of protein sequence variants was last modified May 12, 2007. The HGVS nomenclature for the description of DNA sequence variants was last modified June 15, 2007 The HGVS nomenclature for the description of RNA sequence variants was last modified May 12, 2007\n\nHGVS nomenclatures can be used freely by the public.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "CodeSystem" - } - ], - "reference": { - "reference": "CodeSystem/loinc-answers" - }, - "name": "LOINC Answers", - "description": "LOINC ANSWERS used by NCPI resources", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "CodeSystem" - } - ], - "reference": { - "reference": "CodeSystem/mondo" - }, - "name": "Mondo Disease Ontology", - "description": "The Mondo Disease Ontology (Mondo) aims to harmonize disease definitions across the world. The name Mondo comes from the latin word 'mundus' and means 'for the world.'", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "CodeSystem" - } - ], - "reference": { - "reference": "CodeSystem/ncit" - }, - "name": "NCI Thesaurus", - "description": "NCI Thesaurus (NCIt) provides reference terminology for many NCI and other systems. It covers vocabulary for clinical care, translational and basic research, and public information and administrative activities.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "CodeSystem" - } - ], - "reference": { - "reference": "CodeSystem/ncpi" - }, - "name": "NCPI FHIR Codes", - "description": "Codes that would apply to NCPI projects", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "CodeSystem" - } - ], - "reference": { - "reference": "CodeSystem/ncpi-data-types" - }, - "name": "Data Types for NCPI Research", - "description": "Data Types for NCPI Research", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "CodeSystem" - } - ], - "reference": { - "reference": "CodeSystem/omim" - }, - "name": "Online Mendelian Inheritance in Man", - "description": "An online database that describes the function and phenotypes associated with human genes", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "CodeSystem" - } - ], - "reference": { - "reference": "CodeSystem/tbd-codes" - }, - "name": "ToBeDeterminedCodes ('TbdCodes')", - "description": "These codes are currently 'TBD-LOINC' codes. The CG WG is requesting formal LOINC codes.", - "exampleBoolean": false - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Observation" - } - ], - "reference": { - "reference": "Observation/anvil-summary-cmg" - }, - "name": "Summary detail for Center for Mendelian Genomics", - "description": "Summary detail for Center for Mendelian Genomics", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Observation" - } - ], - "reference": { - "reference": "Observation/anvil-summary-phs000711" - }, - "name": "Baylor Hopkins Center for Mendelian Genomics (BH CMG)", - "description": "Baylor Hopkins Center for Mendelian Genomics (BH CMG)", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Observation" - } - ], - "reference": { - "reference": "Observation/diagnostic-implication-1" - }, - "name": "diagnostic-implication-1", - "description": "Example representation of a known variant found during genetic testing", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "DiagnosticReport" - } - ], - "reference": { - "reference": "DiagnosticReport/diagnostic-report-1" - }, - "name": "diagnostic-report-1", - "description": "Example of a DiagnosticReport which aggregates genetic findings for a given test or run", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Condition" - } - ], - "reference": { - "reference": "Condition/disease-example-1" - }, - "name": "disease-example-1", - "description": "Example of the representation of Disease.", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/disease" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "DocumentReference" - } - ], - "reference": { - "reference": "DocumentReference/drs-document-reference-example-1" - }, - "name": "drs-document-reference-example-1", - "description": "Example of the representation of DRS Document Reference.", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-document-reference" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Encounter" - } - ], - "reference": { - "reference": "Encounter/example-encounter-study-01-patient-01" - }, - "name": "Example Encounter Study 01 Patient 01", - "description": "Example encounter for use with raw data to help tie different rows associated with the same event together.", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Observation" - } - ], - "reference": { - "reference": "Observation/example-observation-data-row-1" - }, - "name": "Example of Raw Data", - "description": "Example Observation representing a single row of raw data from an single data table.", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Questionnaire" - } - ], - "reference": { - "reference": "Questionnaire/example-questionnaire-demographics-1" - }, - "name": "Example of a Questionnaire to Represent Raw Data", - "description": "An example Questionnaire that is used to describe the individual rows of data that are to be stored as QuestionnaireResponses", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "QuestionnaireResponse" - } - ], - "reference": { - "reference": "QuestionnaireResponse/example-questionnaire-demographics-response-1" - }, - "name": "Example of a QuestionnaireResponse to Represent Raw Data", - "description": "A Single row of data represented in FHIR as a QuestionnaireResponse", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ConceptMap" - } - ], - "reference": { - "reference": "ConceptMap/example-study-data-dictionary-conceptmap-1" - }, - "name": "Concept Map showing representing harmonization mappings", - "description": "Data Harmonization for example dataset", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-harmony" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ActivityDefinition" - } - ], - "reference": { - "reference": "ActivityDefinition/example-study-data-dictionary-table-1" - }, - "name": "Data-Dictionary Table", - "description": "Example Study Data Dictionary Data Table definition", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-table" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ObservationDefinition" - } - ], - "reference": { - "reference": "ObservationDefinition/example-study-data-dictionary-variable-1-1" - }, - "name": "Example Study Data Dictionary Variable subjectid", - "description": "Participant's Unique Identifier (example of simple variable)", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ObservationDefinition" - } - ], - "reference": { - "reference": "ObservationDefinition/example-study-data-dictionary-variable-1-2" - }, - "name": "Example Study Data Dictionary Variable gender", - "description": "Subject's gender", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ObservationDefinition" - } - ], - "reference": { - "reference": "ObservationDefinition/example-study-data-dictionary-variable-1-3" - }, - "name": "Example Study Data Dictionary Variable age_at_enrollment", - "description": "Subject's Age at Enrollment (Example with a range of 30-40 years of age)", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ObservationDefinition" - } - ], - "reference": { - "reference": "ObservationDefinition/example-study-data-dictionary-variable-1-4" - }, - "name": "Example Study Data Dictionary Variable bmi", - "description": "Subject's BMI at Enrollment", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ObservationDefinition" - } - ], - "reference": { - "reference": "ObservationDefinition/example-study-data-dictionary-variable-1-5" - }, - "name": "Data Dictionary Variable status", - "description": "Subject's Case/Control Status", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Observation" - } - ], - "reference": { - "reference": "Observation/example-study-summary-gender" - }, - "name": "Example Variable Summary with categories (gender)", - "description": "Simple example of a VariableSummary using components to capture counts of different categories (male, female and missing)", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-variable-summary" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Group" - } - ], - "reference": { - "reference": "Group/example-summary-group-1" - }, - "name": "Example Group used for Summary Results", - "description": "Just an example group for demonstrational purposes", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Observation" - } - ], - "reference": { - "reference": "Observation/family-relationship-example-1" - }, - "name": "family-relationship-example-1", - "description": "Example of the representation of Family Relationship.", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Observation" - } - ], - "reference": { - "reference": "Observation/family-relationship-example-2" - }, - "name": "family-relationship-example-2", - "description": "Example of the representation of Family Relationship.", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Observation" - } - ], - "reference": { - "reference": "Observation/family-relationship-example-3" - }, - "name": "family-relationship-example-3", - "description": "Example of the representation of Family Relationship.", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Observation" - } - ], - "reference": { - "reference": "Observation/family-relationship-example-4" - }, - "name": "family-relationship-example-4", - "description": "Example of the representation of Family Relationship.", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ResearchStudy" - } - ], - "reference": { - "reference": "ResearchStudy/ncpi-research-study-01" - }, - "name": "ncpi-research-study-01", - "description": "An example research study", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Group" - } - ], - "reference": { - "reference": "Group/ncpi-research-study-01-group-01-main" - }, - "name": "ncpi-research-study-01-group-01-main", - "description": "Study 01's complete enrollment", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Patient" - } - ], - "reference": { - "reference": "Patient/ncpi-research-study-01-patient-01" - }, - "name": "ncpi-research-study-01-patient-01", - "description": "Example of a patient from study 01", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Patient" - } - ], - "reference": { - "reference": "Patient/ncpi-research-study-01-patient-02" - }, - "name": "ncpi-research-study-01-patient-02", - "description": "Example of a patient from study 02", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Specimen" - } - ], - "reference": { - "reference": "Specimen/ncpi-research-study-01-specimen-01" - }, - "name": "NCPI Research Study 01 Specimen 01", - "description": "An example Specimen used to indicate which sample a row of raw data is associated with.", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Organization" - } - ], - "reference": { - "reference": "Organization/organization-example-1" - }, - "name": "organization-example-1", - "description": "Example of the representation of Organization.", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Patient" - } - ], - "reference": { - "reference": "Patient/patient-example-1" - }, - "name": "patient-example-1", - "description": "Example of the representation of Patient.", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Patient" - } - ], - "reference": { - "reference": "Patient/patient-example-2" - }, - "name": "patient-example-2", - "description": "Example of the representation of Patient.", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Patient" - } - ], - "reference": { - "reference": "Patient/patient-example-3" - }, - "name": "patient-example-3", - "description": "Example of the representation of Patient.", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Condition" - } - ], - "reference": { - "reference": "Condition/phenotype-example-1" - }, - "name": "phenotype-example-1", - "description": "Example of the representation of observed Phenotype.", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/phenotype" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Practitioner" - } - ], - "reference": { - "reference": "Practitioner/practitioner-example-1" - }, - "name": "practitioner-example-1", - "description": "Example of the representation of Practitioner.", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "PractitionerRole" - } - ], - "reference": { - "reference": "PractitionerRole/practitioner-role-example-1" - }, - "name": "practitioner-role-example-1", - "description": "Example of the representation of Practitioner Role.", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "DocumentReference" - } - ], - "reference": { - "reference": "DocumentReference/research-document-reference-example-1" - }, - "name": "research-document-reference-example-1", - "description": "Example of the representation of Research Document Reference.", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-document-reference" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ResearchStudy" - } - ], - "reference": { - "reference": "ResearchStudy/research-study-cmg" - }, - "name": "research-study-cmg", - "description": "Center for Mendelian Genomics", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ResearchStudy" - } - ], - "reference": { - "reference": "ResearchStudy/research-study-example-1" - }, - "name": "research-study-example-1", - "description": "Example of the representation of Research Study.", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ResearchStudy" - } - ], - "reference": { - "reference": "ResearchStudy/research-study-phs000711" - }, - "name": "research-study-phs000711", - "description": "Baylor Hopkins Center for Mendelian Genomics (BH CMG)", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ResearchSubject" - } - ], - "reference": { - "reference": "ResearchSubject/research-subject-example-1" - }, - "name": "research-subject-example-1", - "description": "Example of the representation of Research Subject.", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ResearchSubject" - } - ], - "reference": { - "reference": "ResearchSubject/research-subject-example-2" - }, - "name": "research-subject-example-2", - "description": "Example of the representation of Research Subject.", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ResearchSubject" - } - ], - "reference": { - "reference": "ResearchSubject/research-subject-example-3" - }, - "name": "research-subject-example-3", - "description": "Example of the representation of Research Subject.", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ResearchSubject" - } - ], - "reference": { - "reference": "ResearchSubject/research-subject-study-01-patient-01" - }, - "name": "research-subject-study-01-patient-01", - "description": "Example representation of a research subject", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "ResearchSubject" - } - ], - "reference": { - "reference": "ResearchSubject/research-subject-study-01-patient-02" - }, - "name": "research-subject-study-01-patient-02", - "description": "Example representation of a research subject", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Specimen" - } - ], - "reference": { - "reference": "Specimen/specimen-example-1" - }, - "name": "specimen-example-1", - "description": "Example of the representation of Specimen.", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Task" - } - ], - "reference": { - "reference": "Task/task-example-1" - }, - "name": "task-example-1", - "description": "Example of the representation of Task.", - "exampleBoolean": true - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Task" - } - ], - "reference": { - "reference": "Task/task-example-2" - }, - "name": "task-example-2", - "description": "Example of the representation of Task that points to a ResearchDocumentReference.", - "exampleCanonical": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-specimen-task" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", - "valueString": "Observation" - } - ], - "reference": { - "reference": "Observation/variant-example-1" - }, - "name": "variant-example-1", - "description": "Example of a fhir representation of a variant", - "exampleBoolean": true - } - ], - "page": { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "toc.html" - } - ], - "nameUrl": "toc.html", - "title": "Table of Contents", - "generation": "html", - "page": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "index.html" - } - ], - "nameUrl": "index.html", - "title": "Home", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "authors.html" - } - ], - "nameUrl": "authors.html", - "title": "Authors", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "background.html" - } - ], - "nameUrl": "background.html", - "title": "Background", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "childhood_cancer.html" - } - ], - "nameUrl": "childhood_cancer.html", - "title": "Childhood Cancer", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "contact.html" - } - ], - "nameUrl": "contact.html", - "title": "Contact", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "downloads.html" - } - ], - "nameUrl": "downloads.html", - "title": "Downloads", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "ehr.html" - } - ], - "nameUrl": "ehr.html", - "title": "Ehr", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "example_raw_data.html" - } - ], - "nameUrl": "example_raw_data.html", - "title": "Example Raw Data", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "example_study_metadata.html" - } - ], - "nameUrl": "example_study_metadata.html", - "title": "Example Study Metadata", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "family.html" - } - ], - "nameUrl": "family.html", - "title": "Family", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "FHIR_Basics.html" - } - ], - "nameUrl": "FHIR_Basics.html", - "title": "FHIR Basics", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "files.html" - } - ], - "nameUrl": "files.html", - "title": "Files", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "finding_a_research_study.html" - } - ], - "nameUrl": "finding_a_research_study.html", - "title": "Finding a Research Study", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "harmonization.html" - } - ], - "nameUrl": "harmonization.html", - "title": "Harmonization", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "ig_versioning.html" - } - ], - "nameUrl": "ig_versioning.html", - "title": "Ig Versioning", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "modular_ig.html" - } - ], - "nameUrl": "modular_ig.html", - "title": "Modular Ig", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "ncpi.html" - } - ], - "nameUrl": "ncpi.html", - "title": "Ncpi", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "participant.html" - } - ], - "nameUrl": "participant.html", - "title": "Participant", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "performing_a_genomic_analysis.html" - } - ], - "nameUrl": "performing_a_genomic_analysis.html", - "title": "Performing a Genomic Analysis", - "generation": "markdown" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", - "valueUrl": "rare_disease.html" - } - ], - "nameUrl": "rare_disease.html", - "title": "Rare Disease", - "generation": "markdown" - }, - { - "extension": [ - { - "url": 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Context.related = Task ", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "StructureDefinition:resource" + }], + "reference" : { + "reference" : "StructureDefinition/ncpi-specimen-task" + }, + "name" : "Research Task", + "description" : "A FHIR analysis task that takes at least one specimen as input and produces at least one document.", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "StructureDefinition:resource" + }], + "reference" : { + "reference" : "StructureDefinition/study-data-dictionary-harmony" + }, + "name" : "NCPI Data Dictionary Harmony", + "description" : "Based on the FHIR resource type, ConceptMap, the StudyDataDictionaryHarmony resource provides insight into the transformations made during the ETL from source data into FHIR allowing clients to use the $translate function to discover all of the public codes that were mapped from one of the study's actual vocabulary.", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "StructureDefinition:resource" + }], + "reference" : { + "reference" : "StructureDefinition/study-data-dictionary-table" + }, + "name" : "NCPI Study Data Dictionary Data Table", + "description" : "Aggregates Variable Details associated with a single dataset table that are represented in FHIR as as list of references to StudyDataDictionaryVariables in the *observationResultRequirement* property.", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "StructureDefinition:resource" + }], + "reference" : { + "reference" : "StructureDefinition/study-data-dictionary-variable" + }, + "name" : "NCPI Study Data Dictionary Data Variable", + "description" : "FHIR profile used to describe single variable from the dataset. This resource should be as complete as possible including details such as *description*, *data-type*, *permitted enumerations*, *quantity units*, etc.", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "StructureDefinition:resource" + }], + "reference" : { + "reference" : "StructureDefinition/study-group" + }, + "name" : "NCPI Study Group", + "description" : "Grouping subject participation within a research study is helpful to provide definitive lists of participants that fit a specific criteria such as *All Participants* or *Participants From a Particular Consent Group*, etc. ", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "StructureDefinition:resource" + }], + "reference" : { + "reference" : "StructureDefinition/study-summary" + }, + "name" : "Study Summary", + "description" : "An observation containing summary information about a study in it's entirety or one of it's subpopulations.", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "StructureDefinition:resource" + }], + "reference" : { + "reference" : "StructureDefinition/study-variable-summary" + }, + "name" : "Study Variable Summary", + "description" : "An observation containing summary data associated with research data from FHIR.", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "StructureDefinition:extension" + }], + "reference" : { + "reference" : "StructureDefinition/supporting-info" + }, + "name" : "Supporting Information", + "description" : "Additional information relevant to interpreting/understanding the report.", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ValueSet" + }], + "reference" : { + "reference" : "ValueSet/condition-inheritance-vs" + }, + "name" : "Condition Inheritance Pattern", + "description" : "Value Set for specific ttransmission patterns of a condition in a pedigree", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ValueSet" + }], + "reference" : { + "reference" : "ValueSet/disease-codes" + }, + "name" : "Disease Codes", + "description" : "This value set includes all codes from this FHIR server's representation of OMIM, Mondo and NICt CodeSystems.", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ValueSet" + }], + "reference" : { + "reference" : "ValueSet/example-study-data-dictionary-case-control-vs-1" + }, + "name" : "Case/Control Vars for 'status' categoricals", + "description" : "Example ValueSet listing all possible 'values' from the Case/Control variable.", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ValueSet" + }], + "reference" : { + "reference" : "ValueSet/datatable-mappings-valueset-1" + }, + "name" : "Harmonized ValueSet for data table", + "description" : "Public codes mapped from example dataset\n\nThe codes used below were chosen purely for example's sake and are in no way an endorsement or suggestion for terms that should be used in a real data-dictionary.", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ValueSet" + }], + "reference" : { + "reference" : "ValueSet/datatable-valueset-1" + }, + "name" : "Table ValueSet", + "description" : "Example Data Table with 4 variables", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ValueSet" + }], + "reference" : { + "reference" : "ValueSet/loinc-answers" + }, + "name" : "LOINC Answers", + "description" : "LOINC ANSWERS used by NCPI resources", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ValueSet" + }], + "reference" : { + "reference" : "ValueSet/ncpi-vs" + }, + "name" : "NCPI FHIR Codes", + "description" : "Codes that would apply to NCPI projects", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ValueSet" + }], + "reference" : { + "reference" : "ValueSet/phenotype-codes" + }, + "name" : "Phenotype Codes", + "description" : "This value set includes all codes from Human Phenotype Ontology.", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ValueSet" + }], + "reference" : { + "reference" : "ValueSet/tbd-codes" + }, + "name" : "tbd-codes", + "description" : "This value set includes all TBD Codes", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "CodeSystem" + }], + "reference" : { + "reference" : "CodeSystem/ConditionInheritanceMode" + }, + "name" : "Condition Inheritance Pattern", + "description" : "A set of terms that describe the transmission pattern of a condition in a pedigree.", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "CodeSystem" + }], + "reference" : { + "reference" : "CodeSystem/example-study-data-dictionary-dataset-codesystem-1" + }, + "name" : "Dataset CodeSystem (lists all tables)", + "description" : "Example CodeSystem for a data-dictionary dataset with only 1 table.", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "CodeSystem" + }], + "reference" : { + "reference" : "CodeSystem/example-study-data-dictionary-datatable-codesystem-1" + }, + "name" : "Datatable CodeSystem (lists all variables)", + "description" : "Example CodeSystem for a data-dictionary table with 4 variables represented as codes.", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "CodeSystem" + }], + "reference" : { + "reference" : "CodeSystem/hpo" + }, + "name" : "Human Phenotype Ontology", + "description" : "The Human Phenotype Ontology (HPO) provides a standardized vocabulary of phenotypic abnormalities encountered in human disease. Please see license of HPO at http://www.human-phenotype-ontology.org", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "CodeSystem" + }], + "reference" : { + "reference" : "CodeSystem/v3-hgvs" + }, + "name" : "Human Genome Variation Society nomenclature", + "description" : "HGVS nomenclatures are the guidelines for mutation nomenclature made by the Human Genome Variation Society.\n\nHGVS nomenclature can be used with the HL7 coded data type (code data type that accepts expression data, or a coded expression data type). This coded data type should be able to distinguish expressions in HGVS nomenclature from coded concepts. For example, in the HL7 messages specified according to the HL7 V2 Clinical Genomics Fully LOINC-Qualified Genetic Variation Model, HGVS nomenclature can be used to as the observation values for DNA sequence variations. For example, OBX|1|CWE|48004-6^DNA Sequence Variation^LN||c.1129C>T^^HGVS|\n\nVersioning information: The HGVS nomenclature for the description of sequence variants was last modified Feb 20, 2008. The HGVS nomenclature for the description of protein sequence variants was last modified May 12, 2007. The HGVS nomenclature for the description of DNA sequence variants was last modified June 15, 2007 The HGVS nomenclature for the description of RNA sequence variants was last modified May 12, 2007\n\nHGVS nomenclatures can be used freely by the public.", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "CodeSystem" + }], + "reference" : { + "reference" : "CodeSystem/loinc-answers" + }, + "name" : "LOINC Answers", + "description" : "LOINC ANSWERS used by NCPI resources", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "CodeSystem" + }], + "reference" : { + "reference" : "CodeSystem/mondo" + }, + "name" : "Mondo Disease Ontology", + "description" : "The Mondo Disease Ontology (Mondo) aims to harmonize disease definitions across the world. The name Mondo comes from the latin word 'mundus' and means 'for the world.'", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "CodeSystem" + }], + "reference" : { + "reference" : "CodeSystem/ncit" + }, + "name" : "NCI Thesaurus", + "description" : "NCI Thesaurus (NCIt) provides reference terminology for many NCI and other systems. It covers vocabulary for clinical care, translational and basic research, and public information and administrative activities.", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "CodeSystem" + }], + "reference" : { + "reference" : "CodeSystem/ncpi" + }, + "name" : "NCPI FHIR Codes", + "description" : "Codes that would apply to NCPI projects", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "CodeSystem" + }], + "reference" : { + "reference" : "CodeSystem/ncpi-data-types" + }, + "name" : "Data Types for NCPI Research", + "description" : "Data Types for NCPI Research", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "CodeSystem" + }], + "reference" : { + "reference" : "CodeSystem/omim" + }, + "name" : "Online Mendelian Inheritance in Man", + "description" : "An online database that describes the function and phenotypes associated with human genes", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "CodeSystem" + }], + "reference" : { + "reference" : "CodeSystem/tbd-codes" + }, + "name" : "ToBeDeterminedCodes ('TbdCodes')", + "description" : "These codes are currently 'TBD-LOINC' codes. The CG WG is requesting formal LOINC codes.", + "exampleBoolean" : false + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Observation" + }], + "reference" : { + "reference" : "Observation/anvil-summary-cmg" + }, + "name" : "Summary detail for Center for Mendelian Genomics", + "description" : "Summary detail for Center for Mendelian Genomics", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Observation" + }], + "reference" : { + "reference" : "Observation/anvil-summary-phs000711" + }, + "name" : "Baylor Hopkins Center for Mendelian Genomics (BH CMG)", + "description" : "Baylor Hopkins Center for Mendelian Genomics (BH CMG)", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Observation" + }], + "reference" : { + "reference" : "Observation/diagnostic-implication-1" + }, + "name" : "diagnostic-implication-1", + "description" : "Example representation of a known variant found during genetic testing", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "DiagnosticReport" + }], + "reference" : { + "reference" : "DiagnosticReport/diagnostic-report-1" + }, + "name" : "diagnostic-report-1", + "description" : "Example of a DiagnosticReport which aggregates genetic findings for a given test or run", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Condition" + }], + "reference" : { + "reference" : "Condition/disease-example-1" + }, + "name" : "disease-example-1", + "description" : "Example of the representation of Disease.", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/disease" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "DocumentReference" + }], + "reference" : { + "reference" : "DocumentReference/drs-document-reference-example-1" + }, + "name" : "drs-document-reference-example-1", + "description" : "Example of the representation of DRS Document Reference.", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-document-reference" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Encounter" + }], + "reference" : { + "reference" : "Encounter/example-encounter-study-01-patient-01" + }, + "name" : "Example Encounter Study 01 Patient 01", + "description" : "Example encounter for use with raw data to help tie different rows associated with the same event together.", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Observation" + }], + "reference" : { + "reference" : "Observation/example-observation-data-row-1" + }, + "name" : "Example of Raw Data", + "description" : "Example Observation representing a single row of raw data from an single data table.", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Questionnaire" + }], + "reference" : { + "reference" : "Questionnaire/example-questionnaire-demographics-1" + }, + "name" : "Example of a Questionnaire to Represent Raw Data", + "description" : "An example Questionnaire that is used to describe the individual rows of data that are to be stored as QuestionnaireResponses", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "QuestionnaireResponse" + }], + "reference" : { + "reference" : "QuestionnaireResponse/example-questionnaire-demographics-response-1" + }, + "name" : "Example of a QuestionnaireResponse to Represent Raw Data", + "description" : "A Single row of data represented in FHIR as a QuestionnaireResponse", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ConceptMap" + }], + "reference" : { + "reference" : "ConceptMap/example-study-data-dictionary-conceptmap-1" + }, + "name" : "Concept Map showing representing harmonization mappings", + "description" : "Data Harmonization for example dataset", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-harmony" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ActivityDefinition" + }], + "reference" : { + "reference" : "ActivityDefinition/example-study-data-dictionary-table-1" + }, + "name" : "Data-Dictionary Table", + "description" : "Example Study Data Dictionary Data Table definition", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-table" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ObservationDefinition" + }], + "reference" : { + "reference" : "ObservationDefinition/example-study-data-dictionary-variable-1-1" + }, + "name" : "Example Study Data Dictionary Variable subjectid", + "description" : "Participant's Unique Identifier (example of simple variable)", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ObservationDefinition" + }], + "reference" : { + "reference" : "ObservationDefinition/example-study-data-dictionary-variable-1-2" + }, + "name" : "Example Study Data Dictionary Variable gender", + "description" : "Subject's gender", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ObservationDefinition" + }], + "reference" : { + "reference" : "ObservationDefinition/example-study-data-dictionary-variable-1-3" + }, + "name" : "Example Study Data Dictionary Variable age_at_enrollment", + "description" : "Subject's Age at Enrollment (Example with a range of 30-40 years of age)", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ObservationDefinition" + }], + "reference" : { + "reference" : "ObservationDefinition/example-study-data-dictionary-variable-1-4" + }, + "name" : "Example Study Data Dictionary Variable bmi", + "description" : "Subject's BMI at Enrollment", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ObservationDefinition" + }], + "reference" : { + "reference" : "ObservationDefinition/example-study-data-dictionary-variable-1-5" + }, + "name" : "Data Dictionary Variable status", + "description" : "Subject's Case/Control Status", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Observation" + }], + "reference" : { + "reference" : "Observation/example-study-summary-gender" + }, + "name" : "Example Variable Summary with categories (gender)", + "description" : "Simple example of a VariableSummary using components to capture counts of different categories (male, female and missing)", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-variable-summary" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Group" + }], + "reference" : { + "reference" : "Group/example-summary-group-1" + }, + "name" : "Example Group used for Summary Results", + "description" : "Just an example group for demonstrational purposes", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Observation" + }], + "reference" : { + "reference" : "Observation/family-relationship-example-1" + }, + "name" : "family-relationship-example-1", + "description" : "Example of the representation of Family Relationship.", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Observation" + }], + "reference" : { + "reference" : "Observation/family-relationship-example-2" + }, + "name" : "family-relationship-example-2", + "description" : "Example of the representation of Family Relationship.", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Observation" + }], + "reference" : { + "reference" : "Observation/family-relationship-example-3" + }, + "name" : "family-relationship-example-3", + "description" : "Example of the representation of Family Relationship.", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Observation" + }], + "reference" : { + "reference" : "Observation/family-relationship-example-4" + }, + "name" : "family-relationship-example-4", + "description" : "Example of the representation of Family Relationship.", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ResearchStudy" + }], + "reference" : { + "reference" : "ResearchStudy/ncpi-research-study-01" + }, + "name" : "ncpi-research-study-01", + "description" : "An example research study", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Group" + }], + "reference" : { + "reference" : "Group/ncpi-research-study-01-group-01-main" + }, + "name" : "ncpi-research-study-01-group-01-main", + "description" : "Study 01's complete enrollment", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Patient" + }], + "reference" : { + "reference" : "Patient/ncpi-research-study-01-patient-01" + }, + "name" : "ncpi-research-study-01-patient-01", + "description" : "Example of a patient from study 01", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Patient" + }], + "reference" : { + "reference" : "Patient/ncpi-research-study-01-patient-02" + }, + "name" : "ncpi-research-study-01-patient-02", + "description" : "Example of a patient from study 02", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Specimen" + }], + "reference" : { + "reference" : "Specimen/ncpi-research-study-01-specimen-01" + }, + "name" : "NCPI Research Study 01 Specimen 01", + "description" : "An example Specimen used to indicate which sample a row of raw data is associated with.", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Organization" + }], + "reference" : { + "reference" : "Organization/organization-example-1" + }, + "name" : "organization-example-1", + "description" : "Example of the representation of Organization.", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Patient" + }], + "reference" : { + "reference" : "Patient/patient-example-1" + }, + "name" : "patient-example-1", + "description" : "Example of the representation of Patient.", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Patient" + }], + "reference" : { + "reference" : "Patient/patient-example-2" + }, + "name" : "patient-example-2", + "description" : "Example of the representation of Patient.", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Patient" + }], + "reference" : { + "reference" : "Patient/patient-example-3" + }, + "name" : "patient-example-3", + "description" : "Example of the representation of Patient.", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Condition" + }], + "reference" : { + "reference" : "Condition/phenotype-example-1" + }, + "name" : "phenotype-example-1", + "description" : "Example of the representation of observed Phenotype.", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/phenotype" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Practitioner" + }], + "reference" : { + "reference" : "Practitioner/practitioner-example-1" + }, + "name" : "practitioner-example-1", + "description" : "Example of the representation of Practitioner.", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "PractitionerRole" + }], + "reference" : { + "reference" : "PractitionerRole/practitioner-role-example-1" + }, + "name" : "practitioner-role-example-1", + "description" : "Example of the representation of Practitioner Role.", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "DocumentReference" + }], + "reference" : { + "reference" : "DocumentReference/research-document-reference-example-1" + }, + "name" : "research-document-reference-example-1", + "description" : "Example of the representation of Research Document Reference.", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-document-reference" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ResearchStudy" + }], + "reference" : { + "reference" : "ResearchStudy/research-study-cmg" + }, + "name" : "research-study-cmg", + "description" : "Center for Mendelian Genomics", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ResearchStudy" + }], + "reference" : { + "reference" : "ResearchStudy/research-study-example-1" + }, + "name" : "research-study-example-1", + "description" : "Example of the representation of Research Study.", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ResearchStudy" + }], + "reference" : { + "reference" : "ResearchStudy/research-study-phs000711" + }, + "name" : "research-study-phs000711", + "description" : "Baylor Hopkins Center for Mendelian Genomics (BH CMG)", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ResearchSubject" + }], + "reference" : { + "reference" : "ResearchSubject/research-subject-example-1" + }, + "name" : "research-subject-example-1", + "description" : "Example of the representation of Research Subject.", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ResearchSubject" + }], + "reference" : { + "reference" : "ResearchSubject/research-subject-example-2" + }, + "name" : "research-subject-example-2", + "description" : "Example of the representation of Research Subject.", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ResearchSubject" + }], + "reference" : { + "reference" : "ResearchSubject/research-subject-example-3" + }, + "name" : "research-subject-example-3", + "description" : "Example of the representation of Research Subject.", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ResearchSubject" + }], + "reference" : { + "reference" : "ResearchSubject/research-subject-study-01-patient-01" + }, + "name" : "research-subject-study-01-patient-01", + "description" : "Example representation of a research subject", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "ResearchSubject" + }], + "reference" : { + "reference" : "ResearchSubject/research-subject-study-01-patient-02" + }, + "name" : "research-subject-study-01-patient-02", + "description" : "Example representation of a research subject", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Specimen" + }], + "reference" : { + "reference" : "Specimen/specimen-example-1" + }, + "name" : "specimen-example-1", + "description" : "Example of the representation of Specimen.", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Task" + }], + "reference" : { + "reference" : "Task/task-example-1" + }, + "name" : "task-example-1", + "description" : "Example of the representation of Task.", + "exampleBoolean" : true + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Task" + }], + "reference" : { + "reference" : "Task/task-example-2" + }, + "name" : "task-example-2", + "description" : "Example of the representation of Task that points to a ResearchDocumentReference.", + "exampleCanonical" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-specimen-task" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/resource-information", + "valueString" : "Observation" + }], + "reference" : { + "reference" : "Observation/variant-example-1" + }, + "name" : "variant-example-1", + "description" : "Example of a fhir representation of a variant", + "exampleBoolean" : true + }], + "page" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "toc.html" + }], + "nameUrl" : "toc.html", + "title" : "Table of Contents", + "generation" : "html", + "page" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "index.html" + }], + "nameUrl" : "index.html", + "title" : "Home", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "authors.html" + }], + "nameUrl" : "authors.html", + "title" : "Authors", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "background.html" + }], + "nameUrl" : "background.html", + "title" : "Background", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "childhood_cancer.html" + }], + "nameUrl" : "childhood_cancer.html", + "title" : "Childhood Cancer", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "contact.html" + }], + "nameUrl" : "contact.html", + "title" : "Contact", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "downloads.html" + }], + "nameUrl" : "downloads.html", + "title" : "Downloads", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "ehr.html" + }], + "nameUrl" : "ehr.html", + "title" : "Ehr", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "example_raw_data.html" + }], + "nameUrl" : "example_raw_data.html", + "title" : "Example Raw Data", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "example_study_metadata.html" + }], + "nameUrl" : "example_study_metadata.html", + "title" : "Example Study Metadata", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "family.html" + }], + "nameUrl" : "family.html", + "title" : "Family", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "FHIR_Basics.html" + }], + "nameUrl" : "FHIR_Basics.html", + "title" : "FHIR Basics", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "files.html" + }], + "nameUrl" : "files.html", + "title" : "Files", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "finding_a_research_study.html" + }], + "nameUrl" : "finding_a_research_study.html", + "title" : "Finding a Research Study", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "harmonization.html" + }], + "nameUrl" : "harmonization.html", + "title" : "Harmonization", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "ig_versioning.html" + }], + "nameUrl" : "ig_versioning.html", + "title" : "Ig Versioning", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "modular_ig.html" + }], + "nameUrl" : "modular_ig.html", + "title" : "Modular Ig", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "ncpi.html" + }], + "nameUrl" : "ncpi.html", + "title" : "Ncpi", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "participant.html" + }], + "nameUrl" : "participant.html", + "title" : "Participant", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "performing_a_genomic_analysis.html" + }], + "nameUrl" : "performing_a_genomic_analysis.html", + "title" : "Performing a Genomic Analysis", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "rare_disease.html" + }], + "nameUrl" : "rare_disease.html", + "title" : "Rare Disease", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "research_study.html" + }], + "nameUrl" : "research_study.html", + "title" : "Research Study", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "StructureDefinition-study-data-dictionary-variable-note.html" + }], + "nameUrl" : "StructureDefinition-study-data-dictionary-variable-note.html", + "title" : "Structure Definition Study Data Dictionary Variable Note", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "study_metadata.html" + }], + "nameUrl" : "study_metadata.html", + "title" : "Study Metadata", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "tabular.html" + }], + "nameUrl" : "tabular.html", + "title" : "Tabular", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "use_case_tabular_data.html" + }], + "nameUrl" : "use_case_tabular_data.html", + "title" : "Use Case Tabular Data", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "use_cases.html" + }], + "nameUrl" : "use_cases.html", + "title" : "Use Cases", + "generation" : "markdown" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name", + "valueUrl" : "using_source_data.html" + }], + "nameUrl" : "using_source_data.html", + "title" : "Using Source Data", + "generation" : "markdown" + }] + }, + "parameter" : [{ + "code" : "path-resource", + "value" : "input/capabilities" + }, + { + "code" : "path-resource", + "value" : "input/examples" + }, + { + "code" : "path-resource", + "value" : "input/extensions" + }, + { + "code" : "path-resource", + "value" : "input/models" + }, + { + "code" : "path-resource", + "value" : "input/operations" + }, + { + "code" : "path-resource", + "value" : "input/profiles" + }, + { + "code" : "path-resource", + "value" : "input/resources" + }, + { + "code" : "path-resource", + "value" : "input/vocabulary" + }, + { + "code" : "path-resource", + "value" : "input/maps" + }, + { + "code" : "path-resource", + "value" : "input/testing" + }, + { + "code" : "path-resource", + "value" : "input/history" + }, + { + "code" : "path-resource", + "value" : "fsh-generated/resources" + }, + { + "code" : "path-pages", + "value" : "template/config" + }, + { + "code" : "path-pages", + "value" : "input/images" + }, + { + "code" : "path-tx-cache", + "value" : "input-cache/txcache" + }] + } } \ No newline at end of file diff --git a/ImplementationGuide-NCPI-FHIR-Implementation-Guide.ttl b/ImplementationGuide-NCPI-FHIR-Implementation-Guide.ttl index 31012e8d..f5dc2eab 100644 --- a/ImplementationGuide-NCPI-FHIR-Implementation-Guide.ttl +++ b/ImplementationGuide-NCPI-FHIR-Implementation-Guide.ttl @@ -7,18 +7,18 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ImplementationGuide/NCPI-FHIR-Implementation-Guide> a fhir:ImplementationGuide; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "NCPI-FHIR-Implementation-Guide"]; + fhir:Resource.id [ fhir:value "NCPI-FHIR-Implementation-Guide"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><h2>NCPIFHIRImplementationGuide</h2><p>The official URL for this implementation guide is: </p><pre>https://nih-ncpi.github.io/ncpi-fhir-ig/ImplementationGuide/NCPI-FHIR-Implementation-Guide</pre><div><p>FHIR Implementation Guide for the NIH Cloud Platform Interoperability Effort (NCPI).</p>\n</div></div>" - ]; - fhir:ImplementationGuide.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ImplementationGuide/NCPI-FHIR-Implementation-Guide"]; - fhir:ImplementationGuide.version [ fhir:value "0.2.0"]; - fhir:ImplementationGuide.name [ fhir:value "NCPIFHIRImplementationGuide"]; - fhir:ImplementationGuide.title [ fhir:value "NCPI FHIR Implementation Guide"]; - fhir:ImplementationGuide.status [ fhir:value "draft"]; - fhir:ImplementationGuide.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:ImplementationGuide.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:ImplementationGuide.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ImplementationGuide/NCPI-FHIR-Implementation-Guide"]; # + fhir:ImplementationGuide.version [ fhir:value "0.2.0"]; # + fhir:ImplementationGuide.name [ fhir:value "NCPIFHIRImplementationGuide"]; # + fhir:ImplementationGuide.title [ fhir:value "NCPI FHIR Implementation Guide"]; # + fhir:ImplementationGuide.status [ fhir:value "draft"]; # + fhir:ImplementationGuide.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:ImplementationGuide.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:ImplementationGuide.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -36,14 +36,14 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:ImplementationGuide.description [ fhir:value "FHIR Implementation Guide for the NIH Cloud Platform Interoperability Effort (NCPI)."]; - fhir:ImplementationGuide.packageId [ fhir:value "NCPI-FHIR-Implementation-Guide"]; - fhir:ImplementationGuide.license [ fhir:value "CC0-1.0"]; + ]; # + fhir:ImplementationGuide.description [ fhir:value "FHIR Implementation Guide for the NIH Cloud Platform Interoperability Effort (NCPI)."]; # + fhir:ImplementationGuide.packageId [ fhir:value "NCPI-FHIR-Implementation-Guide"]; # + fhir:ImplementationGuide.license [ fhir:value "CC0-1.0"]; # fhir:ImplementationGuide.fhirVersion [ fhir:value "4.0.1"; fhir:index 0 - ]; + ]; # fhir:ImplementationGuide.dependsOn [ fhir:index 0; fhir:Element.id [ fhir:value "hl7tx" ]; @@ -67,7 +67,7 @@ ]; fhir:ImplementationGuide.dependsOn.packageId [ fhir:value "hl7.fhir.us.core" ]; fhir:ImplementationGuide.dependsOn.version [ fhir:value "3.1.1" ] - ]; + ]; # fhir:ImplementationGuide.definition [ fhir:Element.extension [ fhir:index 0; @@ -2151,10 +2151,10 @@ fhir:Element.extension [ fhir:index 0; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/tools/StructureDefinition/ig-page-name" ]; - fhir:Extension.valueUrl [ fhir:value "use_case_raw_data.html" ] + fhir:Extension.valueUrl [ fhir:value "use_case_tabular_data.html" ] ]; - fhir:ImplementationGuide.definition.page.nameUrl [ fhir:value "use_case_raw_data.html" ]; - fhir:ImplementationGuide.definition.page.title [ fhir:value "Use Case Raw Data" ]; + fhir:ImplementationGuide.definition.page.nameUrl [ fhir:value "use_case_tabular_data.html" ]; + fhir:ImplementationGuide.definition.page.title [ fhir:value "Use Case Tabular Data" ]; fhir:ImplementationGuide.definition.page.generation [ fhir:value "markdown" ] ], [ fhir:index 25; @@ -2239,7 +2239,7 @@ fhir:ImplementationGuide.definition.parameter.code [ fhir:value "path-tx-cache" ]; fhir:ImplementationGuide.definition.parameter.value [ fhir:value "input-cache/txcache" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ImplementationGuide-NCPI-FHIR-Implementation-Guide.xml b/ImplementationGuide-NCPI-FHIR-Implementation-Guide.xml index ddf22150..acb63474 100644 --- a/ImplementationGuide-NCPI-FHIR-Implementation-Guide.xml +++ b/ImplementationGuide-NCPI-FHIR-Implementation-Guide.xml @@ -11,7 +11,7 @@ <name value="NCPIFHIRImplementationGuide"/> <title value="NCPI FHIR Implementation Guide"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> @@ -1566,10 +1566,10 @@ </page> <page> <extension url="http://hl7.org/fhir/tools/StructureDefinition/ig-page-name"> - <valueUrl value="use_case_raw_data.html"/> + <valueUrl value="use_case_tabular_data.html"/> </extension> - <nameUrl value="use_case_raw_data.html"/> - <title value="Use Case Raw Data"/> + <nameUrl value="use_case_tabular_data.html"/> + <title value="Use Case Tabular Data"/> <generation value="markdown"/> </page> <page> diff --git a/Observation-anvil-summary-cmg.change.history.html b/Observation-anvil-summary-cmg.change.history.html index 006bc653..67a32469 100644 --- a/Observation-anvil-summary-cmg.change.history.html +++ b/Observation-anvil-summary-cmg.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Observation/anvil-summary-cmg - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-anvil-summary-cmg.html b/Observation-anvil-summary-cmg.html index 5ac5f71c..fba255bd 100644 --- a/Observation-anvil-summary-cmg.html +++ b/Observation-anvil-summary-cmg.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Observation: Summary detail for Center for Mendelian Genom <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-anvil-summary-cmg.json b/Observation-anvil-summary-cmg.json index fa1ec7f1..6b67c2e8 100644 --- a/Observation-anvil-summary-cmg.json +++ b/Observation-anvil-summary-cmg.json @@ -1,75 +1,61 @@ -{ - "resourceType": "Observation", - "id": "anvil-summary-cmg", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"anvil-summary-cmg\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "anvil-summary-cmg" </p></div><p><b>status</b>: final</p><p><b>code</b>: Variable Summary <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Summary)</span></p><p><b>focus</b>: <a href=\"ResearchStudy-research-study-cmg.html\">ResearchStudy/research-study-cmg</a></p><blockquote><p><b>component</b></p><p><b>code</b>: Number of Cohorts <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#CohortCount)</span></p><p><b>value</b>: 41</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Number of Samples <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#SampleCount)</span></p><p><b>value</b>: 807</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Number of Participants <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Participant)</span></p><p><b>value</b>: 807</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Size on Disk <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#StorageSize)</span></p><p><b>value</b>: 4.87 TR<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code TR = 'TR')</span></p></blockquote></div>" - }, - "status": "final", - "code": { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", - "code": "Summary", - "display": "Variable Summary" - } - ] - }, - "focus": [ - { - "reference": "ResearchStudy/research-study-cmg" - } - ], - "component": [ - { - "code": { - "coding": [ - { - "code": "CohortCount", - "display": "Number of Cohorts" - } - ] - }, - "valueInteger": 41 - }, - { - "code": { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", - "code": "SampleCount", - "display": "Number of Samples" - } - ] - }, - "valueInteger": 807 - }, - { - "code": { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", - "code": "Participant", - "display": "Number of Participants" - } - ] - }, - "valueInteger": 807 - }, - { - "code": { - "coding": [ - { - "code": "StorageSize", - "display": "Size on Disk" - } - ] - }, - "valueQuantity": { - "value": 4.87, - "system": "http://unitsofmeasure.org", - "code": "TR" - } - } - ] +{ + "resourceType" : "Observation", + "id" : "anvil-summary-cmg", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"anvil-summary-cmg\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "anvil-summary-cmg" </p></div><p><b>status</b>: final</p><p><b>code</b>: Variable Summary <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Summary)</span></p><p><b>focus</b>: <a href=\"ResearchStudy-research-study-cmg.html\">ResearchStudy/research-study-cmg</a></p><blockquote><p><b>component</b></p><p><b>code</b>: Number of Cohorts <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#CohortCount)</span></p><p><b>value</b>: 41</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Number of Samples <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#SampleCount)</span></p><p><b>value</b>: 807</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Number of Participants <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Participant)</span></p><p><b>value</b>: 807</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Size on Disk <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#StorageSize)</span></p><p><b>value</b>: 4.87 TR<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code TR = 'TR')</span></p></blockquote></div>" + }, + "status" : "final", + "code" : { + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", + "code" : "Summary", + "display" : "Variable Summary" + }] + }, + "focus" : [{ + "reference" : "ResearchStudy/research-study-cmg" + }], + "component" : [{ + "code" : { + "coding" : [{ + "code" : "CohortCount", + "display" : "Number of Cohorts" + }] + }, + "valueInteger" : 41 + }, + { + "code" : { + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", + "code" : "SampleCount", + "display" : "Number of Samples" + }] + }, + "valueInteger" : 807 + }, + { + "code" : { + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", + "code" : "Participant", + "display" : "Number of Participants" + }] + }, + "valueInteger" : 807 + }, + { + "code" : { + "coding" : [{ + "code" : "StorageSize", + "display" : "Size on Disk" + }] + }, + "valueQuantity" : { + "value" : 4.87, + "system" : "http://unitsofmeasure.org", + "code" : "TR" + } + }] } \ No newline at end of file diff --git a/Observation-anvil-summary-cmg.json.html b/Observation-anvil-summary-cmg.json.html index 69fa09bb..6e6e0a7a 100644 --- a/Observation-anvil-summary-cmg.json.html +++ b/Observation-anvil-summary-cmg.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -387,7 +387,7 @@ <h2 id="root">: Summary detail for Center for Mendelian Genomics - JSON Represen <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-anvil-summary-cmg.ttl b/Observation-anvil-summary-cmg.ttl index 87011f1a..03a520c1 100644 --- a/Observation-anvil-summary-cmg.ttl +++ b/Observation-anvil-summary-cmg.ttl @@ -7,12 +7,12 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Observation/anvil-summary-cmg> a fhir:Observation; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "anvil-summary-cmg"]; + fhir:Resource.id [ fhir:value "anvil-summary-cmg"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"anvil-summary-cmg\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "anvil-summary-cmg" </p></div><p><b>status</b>: final</p><p><b>code</b>: Variable Summary <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Summary)</span></p><p><b>focus</b>: <a href=\"ResearchStudy-research-study-cmg.html\">ResearchStudy/research-study-cmg</a></p><blockquote><p><b>component</b></p><p><b>code</b>: Number of Cohorts <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#CohortCount)</span></p><p><b>value</b>: 41</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Number of Samples <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#SampleCount)</span></p><p><b>value</b>: 807</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Number of Participants <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Participant)</span></p><p><b>value</b>: 807</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Size on Disk <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#StorageSize)</span></p><p><b>value</b>: 4.87 TR<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code TR = 'TR')</span></p></blockquote></div>" - ]; - fhir:Observation.status [ fhir:value "final"]; + ]; # + fhir:Observation.status [ fhir:value "final"]; # fhir:Observation.code [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -20,12 +20,12 @@ fhir:Coding.code [ fhir:value "Summary" ]; fhir:Coding.display [ fhir:value "Variable Summary" ] ] - ]; + ]; # fhir:Observation.focus [ fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/ResearchStudy/research-study-cmg>; fhir:Reference.reference [ fhir:value "ResearchStudy/research-study-cmg" ] - ]; + ]; # fhir:Observation.component [ fhir:index 0; fhir:Observation.component.code [ @@ -72,7 +72,7 @@ fhir:Quantity.system [ fhir:value "http://unitsofmeasure.org" ]; fhir:Quantity.code [ fhir:value "TR" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Observation-anvil-summary-cmg.ttl.html b/Observation-anvil-summary-cmg.ttl.html index acc8e395..c31175c9 100644 --- a/Observation-anvil-summary-cmg.ttl.html +++ b/Observation-anvil-summary-cmg.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,23 +292,23 @@ <h2 id="root">: Summary detail for Center for Mendelian Genomics - TTL Represent a fhir:Observation; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "anvil-summary-cmg"]; + <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "anvil-summary-cmg"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"anvil-summary-cmg\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation &quot;anvil-summary-cmg&quot; </p></div><p><b>status</b>: final</p><p><b>code</b>: Variable Summary <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Summary)</span></p><p><b>focus</b>: <a href=\"ResearchStudy-research-study-cmg.html\">ResearchStudy/research-study-cmg</a></p><blockquote><p><b>component</b></p><p><b>code</b>: Number of Cohorts <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#CohortCount)</span></p><p><b>value</b>: 41</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Number of Samples <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#SampleCount)</span></p><p><b>value</b>: 807</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Number of Participants <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Participant)</span></p><p><b>value</b>: 807</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Size on Disk <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#StorageSize)</span></p><p><b>value</b>: 4.87 TR<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code TR = 'TR')</span></p></blockquote></div>" - ]; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; + ]; # + <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.code">fhir:Observation.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "Summary" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Variable Summary" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.focus">fhir:Observation.focus</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ResearchStudy/research-study-cmg" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.component">fhir:Observation.component</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/observation.html#Observation.component.code">fhir:Observation.component.code</a> [ @@ -346,7 +346,7 @@ <h2 id="root">: Summary detail for Center for Mendelian Genomics - TTL Represent <a href="http://hl7.org/fhir/R4/datatypes.html#Quantity#Quantity.value">fhir:Quantity.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#decimal">fhir:value</a> "4.87"^^xsd:decimal ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Quantity#Quantity.system">fhir:Quantity.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://unitsofmeasure.org" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Quantity#Quantity.code">fhir:Quantity.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "TR" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -384,7 +384,7 @@ <h2 id="root">: Summary detail for Center for Mendelian Genomics - TTL Represent <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-anvil-summary-cmg.xml.html b/Observation-anvil-summary-cmg.xml.html index 1a97425b..085522c8 100644 --- a/Observation-anvil-summary-cmg.xml.html +++ b/Observation-anvil-summary-cmg.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -376,7 +376,7 @@ <h2 id="root">: Summary detail for Center for Mendelian Genomics - XML Represent <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-anvil-summary-phs000711.change.history.html b/Observation-anvil-summary-phs000711.change.history.html index d20e39a7..385ae7e9 100644 --- a/Observation-anvil-summary-phs000711.change.history.html +++ b/Observation-anvil-summary-phs000711.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Observation/anvil-summary-phs000711 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-anvil-summary-phs000711.html b/Observation-anvil-summary-phs000711.html index 76790caa..6eea247f 100644 --- a/Observation-anvil-summary-phs000711.html +++ b/Observation-anvil-summary-phs000711.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Observation: Baylor Hopkins Center for Mendelian Genomics <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-anvil-summary-phs000711.json b/Observation-anvil-summary-phs000711.json index d4843498..37f3a10b 100644 --- a/Observation-anvil-summary-phs000711.json +++ b/Observation-anvil-summary-phs000711.json @@ -1,128 +1,104 @@ -{ - "resourceType": "Observation", - "id": "anvil-summary-phs000711", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"anvil-summary-phs000711\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "anvil-summary-phs000711" </p></div><p><b>status</b>: final</p><p><b>code</b>: Variable Summary <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Summary)</span></p><p><b>focus</b>: <a href=\"ResearchStudy-research-study-phs000711.html\">ResearchStudy/research-study-phs000711</a></p><blockquote><p><b>component</b></p><p><b>code</b>: Number of Samples <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#SampleCount)</span></p><p><b>value</b>: 807</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Number of Participants <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Participant)</span></p><p><b>value</b>: 807</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Consent Codes <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#ConsentCodes)</span></p><p><b>value</b>: HMB-IRB-NPU</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Terra Workspace Name <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#TerraWorkspace)</span></p><p><b>value</b>: AnVIL_CMG_BaylorHopkins_HMB-NPU_WES</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Primary Disease <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#PrimaryDisease)</span></p><p><b>value</b>: Mendelian</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Access Type <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#AccessType)</span></p><p><b>value</b>: Controlled Access</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: StudyDesign <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#StudyDesign)</span></p><p><b>value</b>: Mendelian</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: DataType <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#DataType)</span></p><p><b>value</b>: Exome</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Size on Disk <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#StorageSize)</span></p><p><b>value</b>: 4.87 TR<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code TR = 'TR')</span></p></blockquote></div>" - }, - "status": "final", - "code": { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", - "code": "Summary", - "display": "Variable Summary" - } - ] - }, - "focus": [ - { - "reference": "ResearchStudy/research-study-phs000711" - } - ], - "component": [ - { - "code": { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", - "code": "SampleCount", - "display": "Number of Samples" - } - ] - }, - "valueInteger": 807 - }, - { - "code": { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", - "code": "Participant", - "display": "Number of Participants" - } - ] - }, - "valueInteger": 807 - }, - { - "code": { - "coding": [ - { - "code": "ConsentCodes", - "display": "Consent Codes" - } - ] - }, - "valueString": "HMB-IRB-NPU" - }, - { - "code": { - "coding": [ - { - "code": "TerraWorkspace", - "display": "Terra Workspace Name" - } - ] - }, - "valueString": "AnVIL_CMG_BaylorHopkins_HMB-NPU_WES" - }, - { - "code": { - "coding": [ - { - "code": "PrimaryDisease", - "display": "Primary Disease" - } - ] - }, - "valueString": "Mendelian" - }, - { - "code": { - "coding": [ - { - "code": "AccessType", - "display": "Access Type" - } - ] - }, - "valueString": "Controlled Access" - }, - { - "code": { - "coding": [ - { - "code": "StudyDesign" - } - ] - }, - "valueString": "Mendelian" - }, - { - "code": { - "coding": [ - { - "code": "DataType" - } - ] - }, - "valueString": "Exome" - }, - { - "code": { - "coding": [ - { - "code": "StorageSize", - "display": "Size on Disk" - } - ] - }, - "valueQuantity": { - "value": 4.87, - "system": "http://unitsofmeasure.org", - "code": "TR" - } - } - ] +{ + "resourceType" : "Observation", + "id" : "anvil-summary-phs000711", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"anvil-summary-phs000711\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "anvil-summary-phs000711" </p></div><p><b>status</b>: final</p><p><b>code</b>: Variable Summary <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Summary)</span></p><p><b>focus</b>: <a href=\"ResearchStudy-research-study-phs000711.html\">ResearchStudy/research-study-phs000711</a></p><blockquote><p><b>component</b></p><p><b>code</b>: Number of Samples <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#SampleCount)</span></p><p><b>value</b>: 807</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Number of Participants <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Participant)</span></p><p><b>value</b>: 807</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Consent Codes <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#ConsentCodes)</span></p><p><b>value</b>: HMB-IRB-NPU</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Terra Workspace Name <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#TerraWorkspace)</span></p><p><b>value</b>: AnVIL_CMG_BaylorHopkins_HMB-NPU_WES</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Primary Disease <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#PrimaryDisease)</span></p><p><b>value</b>: Mendelian</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Access Type <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#AccessType)</span></p><p><b>value</b>: Controlled Access</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: StudyDesign <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#StudyDesign)</span></p><p><b>value</b>: Mendelian</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: DataType <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#DataType)</span></p><p><b>value</b>: Exome</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Size on Disk <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#StorageSize)</span></p><p><b>value</b>: 4.87 TR<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code TR = 'TR')</span></p></blockquote></div>" + }, + "status" : "final", + "code" : { + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", + "code" : "Summary", + "display" : "Variable Summary" + }] + }, + "focus" : [{ + "reference" : "ResearchStudy/research-study-phs000711" + }], + "component" : [{ + "code" : { + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", + "code" : "SampleCount", + "display" : "Number of Samples" + }] + }, + "valueInteger" : 807 + }, + { + "code" : { + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", + "code" : "Participant", + "display" : "Number of Participants" + }] + }, + "valueInteger" : 807 + }, + { + "code" : { + "coding" : [{ + "code" : "ConsentCodes", + "display" : "Consent Codes" + }] + }, + "valueString" : "HMB-IRB-NPU" + }, + { + "code" : { + "coding" : [{ + "code" : "TerraWorkspace", + "display" : "Terra Workspace Name" + }] + }, + "valueString" : "AnVIL_CMG_BaylorHopkins_HMB-NPU_WES" + }, + { + "code" : { + "coding" : [{ + "code" : "PrimaryDisease", + "display" : "Primary Disease" + }] + }, + "valueString" : "Mendelian" + }, + { + "code" : { + "coding" : [{ + "code" : "AccessType", + "display" : "Access Type" + }] + }, + "valueString" : "Controlled Access" + }, + { + "code" : { + "coding" : [{ + "code" : "StudyDesign" + }] + }, + "valueString" : "Mendelian" + }, + { + "code" : { + "coding" : [{ + "code" : "DataType" + }] + }, + "valueString" : "Exome" + }, + { + "code" : { + "coding" : [{ + "code" : "StorageSize", + "display" : "Size on Disk" + }] + }, + "valueQuantity" : { + "value" : 4.87, + "system" : "http://unitsofmeasure.org", + "code" : "TR" + } + }] } \ No newline at end of file diff --git a/Observation-anvil-summary-phs000711.json.html b/Observation-anvil-summary-phs000711.json.html index 368ac52d..97b63eec 100644 --- a/Observation-anvil-summary-phs000711.json.html +++ b/Observation-anvil-summary-phs000711.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -440,7 +440,7 @@ <h2 id="root">: Baylor Hopkins Center for Mendelian Genomics (BH CMG) - JSON Rep <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-anvil-summary-phs000711.ttl b/Observation-anvil-summary-phs000711.ttl index f5fbf354..0249d28f 100644 --- a/Observation-anvil-summary-phs000711.ttl +++ b/Observation-anvil-summary-phs000711.ttl @@ -7,12 +7,12 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Observation/anvil-summary-phs000711> a fhir:Observation; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "anvil-summary-phs000711"]; + fhir:Resource.id [ fhir:value "anvil-summary-phs000711"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"anvil-summary-phs000711\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "anvil-summary-phs000711" </p></div><p><b>status</b>: final</p><p><b>code</b>: Variable Summary <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Summary)</span></p><p><b>focus</b>: <a href=\"ResearchStudy-research-study-phs000711.html\">ResearchStudy/research-study-phs000711</a></p><blockquote><p><b>component</b></p><p><b>code</b>: Number of Samples <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#SampleCount)</span></p><p><b>value</b>: 807</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Number of Participants <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Participant)</span></p><p><b>value</b>: 807</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Consent Codes <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#ConsentCodes)</span></p><p><b>value</b>: HMB-IRB-NPU</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Terra Workspace Name <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#TerraWorkspace)</span></p><p><b>value</b>: AnVIL_CMG_BaylorHopkins_HMB-NPU_WES</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Primary Disease <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#PrimaryDisease)</span></p><p><b>value</b>: Mendelian</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Access Type <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#AccessType)</span></p><p><b>value</b>: Controlled Access</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: StudyDesign <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#StudyDesign)</span></p><p><b>value</b>: Mendelian</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: DataType <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#DataType)</span></p><p><b>value</b>: Exome</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Size on Disk <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#StorageSize)</span></p><p><b>value</b>: 4.87 TR<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code TR = 'TR')</span></p></blockquote></div>" - ]; - fhir:Observation.status [ fhir:value "final"]; + ]; # + fhir:Observation.status [ fhir:value "final"]; # fhir:Observation.code [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -20,12 +20,12 @@ fhir:Coding.code [ fhir:value "Summary" ]; fhir:Coding.display [ fhir:value "Variable Summary" ] ] - ]; + ]; # fhir:Observation.focus [ fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/ResearchStudy/research-study-phs000711>; fhir:Reference.reference [ fhir:value "ResearchStudy/research-study-phs000711" ] - ]; + ]; # fhir:Observation.component [ fhir:index 0; fhir:Observation.component.code [ @@ -120,7 +120,7 @@ fhir:Quantity.system [ fhir:value "http://unitsofmeasure.org" ]; fhir:Quantity.code [ fhir:value "TR" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Observation-anvil-summary-phs000711.ttl.html b/Observation-anvil-summary-phs000711.ttl.html index 71f7421b..276aa6e0 100644 --- a/Observation-anvil-summary-phs000711.ttl.html +++ b/Observation-anvil-summary-phs000711.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,23 +292,23 @@ <h2 id="root">: Baylor Hopkins Center for Mendelian Genomics (BH CMG) - TTL Repr a fhir:Observation; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "anvil-summary-phs000711"]; + <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "anvil-summary-phs000711"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"anvil-summary-phs000711\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation &quot;anvil-summary-phs000711&quot; </p></div><p><b>status</b>: final</p><p><b>code</b>: Variable Summary <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Summary)</span></p><p><b>focus</b>: <a href=\"ResearchStudy-research-study-phs000711.html\">ResearchStudy/research-study-phs000711</a></p><blockquote><p><b>component</b></p><p><b>code</b>: Number of Samples <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#SampleCount)</span></p><p><b>value</b>: 807</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Number of Participants <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Participant)</span></p><p><b>value</b>: 807</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Consent Codes <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#ConsentCodes)</span></p><p><b>value</b>: HMB-IRB-NPU</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Terra Workspace Name <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#TerraWorkspace)</span></p><p><b>value</b>: AnVIL_CMG_BaylorHopkins_HMB-NPU_WES</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Primary Disease <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#PrimaryDisease)</span></p><p><b>value</b>: Mendelian</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Access Type <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#AccessType)</span></p><p><b>value</b>: Controlled Access</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: StudyDesign <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#StudyDesign)</span></p><p><b>value</b>: Mendelian</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: DataType <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#DataType)</span></p><p><b>value</b>: Exome</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Size on Disk <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#StorageSize)</span></p><p><b>value</b>: 4.87 TR<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code TR = 'TR')</span></p></blockquote></div>" - ]; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; + ]; # + <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.code">fhir:Observation.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "Summary" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Variable Summary" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.focus">fhir:Observation.focus</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ResearchStudy/research-study-phs000711" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.component">fhir:Observation.component</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/observation.html#Observation.component.code">fhir:Observation.component.code</a> [ @@ -384,7 +384,7 @@ <h2 id="root">: Baylor Hopkins Center for Mendelian Genomics (BH CMG) - TTL Repr <a href="http://hl7.org/fhir/R4/datatypes.html#Quantity#Quantity.value">fhir:Quantity.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#decimal">fhir:value</a> "4.87"^^xsd:decimal ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Quantity#Quantity.system">fhir:Quantity.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://unitsofmeasure.org" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Quantity#Quantity.code">fhir:Quantity.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "TR" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -422,7 +422,7 @@ <h2 id="root">: Baylor Hopkins Center for Mendelian Genomics (BH CMG) - TTL Repr <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-anvil-summary-phs000711.xml.html b/Observation-anvil-summary-phs000711.xml.html index a3d43fe8..f4408236 100644 --- a/Observation-anvil-summary-phs000711.xml.html +++ b/Observation-anvil-summary-phs000711.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -419,7 +419,7 @@ <h2 id="root">: Baylor Hopkins Center for Mendelian Genomics (BH CMG) - XML Repr <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-diagnostic-implication-1.change.history.html b/Observation-diagnostic-implication-1.change.history.html index 4b0b117c..d4661f8e 100644 --- a/Observation-diagnostic-implication-1.change.history.html +++ b/Observation-diagnostic-implication-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Observation/diagnostic-implication-1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-diagnostic-implication-1.html b/Observation-diagnostic-implication-1.html index 3aedcb4e..25514256 100644 --- a/Observation-diagnostic-implication-1.html +++ b/Observation-diagnostic-implication-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Observation: diagnostic-implication-1</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-diagnostic-implication-1.json b/Observation-diagnostic-implication-1.json index 6ad4413c..79d380b6 100644 --- a/Observation-diagnostic-implication-1.json +++ b/Observation-diagnostic-implication-1.json @@ -1,75 +1,57 @@ -{ - "resourceType": "Observation", - "id": "diagnostic-implication-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"diagnostic-implication-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "diagnostic-implication-1" </p></div><p><b>status</b>: final</p><p><b>category</b>: Laboratory <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-observation-category.html\">Observation Category Codes</a>#laboratory)</span></p><p><b>code</b>: Diagnostic Implication <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-tbd-codes.html\">ToBeDeterminedCodes ('TbdCodes')</a>#diagnostic-implication)</span></p><p><b>derivedFrom</b>: <a href=\"Observation-variant-example-1.html\">Observation/variant-example-1</a></p><blockquote><p><b>component</b></p><p><b>code</b>: mode-of-inheritance <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-tbd-codes.html\">ToBeDeterminedCodes ('TbdCodes')</a>#mode-of-inheritance)</span></p><p><b>value</b>: Autosomal recessive inheritance <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (condition-inheritance-vs#HP:0000007)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Genetic variation clinical significance [Imp] <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#53037-8)</span></p><p><b>value</b>: Unknown Significance <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA6682-4)</span></p></blockquote></div>" - }, - "status": "final", - "category": [ - { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/observation-category", - "code": "laboratory" - } - ] - } - ], - "code": { - "coding": [ - { - "system": "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes", - "code": "diagnostic-implication", - "display": "Diagnostic Implication" - } - ] - }, - "derivedFrom": [ - { - "reference": "Observation/variant-example-1" - } - ], - "component": [ - { - "code": { - "coding": [ - { - "system": "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes", - "code": "mode-of-inheritance", - "display": "mode-of-inheritance" - } - ] - }, - "valueCodeableConcept": { - "coding": [ - { - "system": "http://fhir.ncpi-project-forge.io/ValueSet/condition-inheritance-vs", - "code": "HP:0000007", - "display": "Autosomal recessive inheritance" - } - ] - } - }, - { - "code": { - "coding": [ - { - "system": "http://loinc.org", - "code": "53037-8", - "display": "Genetic variation clinical significance [Imp]" - } - ] - }, - "valueCodeableConcept": { - "coding": [ - { - "system": "http://loinc.org", - "code": "LA6682-4", - "display": "Unknown Significance" - } - ] - } - } - ] +{ + "resourceType" : "Observation", + "id" : "diagnostic-implication-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"diagnostic-implication-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "diagnostic-implication-1" </p></div><p><b>status</b>: final</p><p><b>category</b>: Laboratory <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-observation-category.html\">Observation Category Codes</a>#laboratory)</span></p><p><b>code</b>: Diagnostic Implication <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-tbd-codes.html\">ToBeDeterminedCodes ('TbdCodes')</a>#diagnostic-implication)</span></p><p><b>derivedFrom</b>: <a href=\"Observation-variant-example-1.html\">Observation/variant-example-1</a></p><blockquote><p><b>component</b></p><p><b>code</b>: mode-of-inheritance <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-tbd-codes.html\">ToBeDeterminedCodes ('TbdCodes')</a>#mode-of-inheritance)</span></p><p><b>value</b>: Autosomal recessive inheritance <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (condition-inheritance-vs#HP:0000007)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Genetic variation clinical significance [Imp] <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#53037-8)</span></p><p><b>value</b>: Unknown Significance <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA6682-4)</span></p></blockquote></div>" + }, + "status" : "final", + "category" : [{ + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/observation-category", + "code" : "laboratory" + }] + }], + "code" : { + "coding" : [{ + "system" : "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes", + "code" : "diagnostic-implication", + "display" : "Diagnostic Implication" + }] + }, + "derivedFrom" : [{ + "reference" : "Observation/variant-example-1" + }], + "component" : [{ + "code" : { + "coding" : [{ + "system" : "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes", + "code" : "mode-of-inheritance", + "display" : "mode-of-inheritance" + }] + }, + "valueCodeableConcept" : { + "coding" : [{ + "system" : "http://fhir.ncpi-project-forge.io/ValueSet/condition-inheritance-vs", + "code" : "HP:0000007", + "display" : "Autosomal recessive inheritance" + }] + } + }, + { + "code" : { + "coding" : [{ + "system" : "http://loinc.org", + "code" : "53037-8", + "display" : "Genetic variation clinical significance [Imp]" + }] + }, + "valueCodeableConcept" : { + "coding" : [{ + "system" : "http://loinc.org", + "code" : "LA6682-4", + "display" : "Unknown Significance" + }] + } + }] } \ No newline at end of file diff --git a/Observation-diagnostic-implication-1.json.html b/Observation-diagnostic-implication-1.json.html index e998aba7..dfda65d5 100644 --- a/Observation-diagnostic-implication-1.json.html +++ b/Observation-diagnostic-implication-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -387,7 +387,7 @@ <h2 id="root">: diagnostic-implication-1 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-diagnostic-implication-1.ttl b/Observation-diagnostic-implication-1.ttl index d7c33549..a81aba92 100644 --- a/Observation-diagnostic-implication-1.ttl +++ b/Observation-diagnostic-implication-1.ttl @@ -8,12 +8,12 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Observation/diagnostic-implication-1> a fhir:Observation; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "diagnostic-implication-1"]; + fhir:Resource.id [ fhir:value "diagnostic-implication-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"diagnostic-implication-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "diagnostic-implication-1" </p></div><p><b>status</b>: final</p><p><b>category</b>: Laboratory <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-observation-category.html\">Observation Category Codes</a>#laboratory)</span></p><p><b>code</b>: Diagnostic Implication <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-tbd-codes.html\">ToBeDeterminedCodes ('TbdCodes')</a>#diagnostic-implication)</span></p><p><b>derivedFrom</b>: <a href=\"Observation-variant-example-1.html\">Observation/variant-example-1</a></p><blockquote><p><b>component</b></p><p><b>code</b>: mode-of-inheritance <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-tbd-codes.html\">ToBeDeterminedCodes ('TbdCodes')</a>#mode-of-inheritance)</span></p><p><b>value</b>: Autosomal recessive inheritance <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (condition-inheritance-vs#HP:0000007)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Genetic variation clinical significance [Imp] <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#53037-8)</span></p><p><b>value</b>: Unknown Significance <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA6682-4)</span></p></blockquote></div>" - ]; - fhir:Observation.status [ fhir:value "final"]; + ]; # + fhir:Observation.status [ fhir:value "final"]; # fhir:Observation.category [ fhir:index 0; fhir:CodeableConcept.coding [ @@ -21,7 +21,7 @@ fhir:Coding.system [ fhir:value "http://terminology.hl7.org/CodeSystem/observation-category" ]; fhir:Coding.code [ fhir:value "laboratory" ] ] - ]; + ]; # fhir:Observation.code [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -29,12 +29,12 @@ fhir:Coding.code [ fhir:value "diagnostic-implication" ]; fhir:Coding.display [ fhir:value "Diagnostic Implication" ] ] - ]; + ]; # fhir:Observation.derivedFrom [ fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Observation/variant-example-1>; fhir:Reference.reference [ fhir:value "Observation/variant-example-1" ] - ]; + ]; # fhir:Observation.component [ fhir:index 0; fhir:Observation.component.code [ @@ -73,7 +73,7 @@ fhir:Coding.display [ fhir:value "Unknown Significance" ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Observation-diagnostic-implication-1.ttl.html b/Observation-diagnostic-implication-1.ttl.html index b83c5fba..4ed5f60a 100644 --- a/Observation-diagnostic-implication-1.ttl.html +++ b/Observation-diagnostic-implication-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -293,30 +293,30 @@ <h2 id="root">: diagnostic-implication-1 - TTL Representation</h2> a fhir:Observation; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "diagnostic-implication-1"]; + <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "diagnostic-implication-1"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"diagnostic-implication-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation &quot;diagnostic-implication-1&quot; </p></div><p><b>status</b>: final</p><p><b>category</b>: Laboratory <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-observation-category.html\">Observation Category Codes</a>#laboratory)</span></p><p><b>code</b>: Diagnostic Implication <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-tbd-codes.html\">ToBeDeterminedCodes ('TbdCodes')</a>#diagnostic-implication)</span></p><p><b>derivedFrom</b>: <a href=\"Observation-variant-example-1.html\">Observation/variant-example-1</a></p><blockquote><p><b>component</b></p><p><b>code</b>: mode-of-inheritance <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-tbd-codes.html\">ToBeDeterminedCodes ('TbdCodes')</a>#mode-of-inheritance)</span></p><p><b>value</b>: Autosomal recessive inheritance <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (condition-inheritance-vs#HP:0000007)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Genetic variation clinical significance [Imp] <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#53037-8)</span></p><p><b>value</b>: Unknown Significance <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA6682-4)</span></p></blockquote></div>" - ]; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; + ]; # + <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.category">fhir:Observation.category</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://terminology.hl7.org/CodeSystem/observation-category" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "laboratory" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.code">fhir:Observation.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "diagnostic-implication" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Diagnostic Implication" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.derivedFrom">fhir:Observation.derivedFrom</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Observation/variant-example-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.component">fhir:Observation.component</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/observation.html#Observation.component.code">fhir:Observation.component.code</a> [ @@ -347,7 +347,7 @@ <h2 id="root">: diagnostic-implication-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://loinc.org" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "LA6682-4" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Unknown Significance" ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -385,7 +385,7 @@ <h2 id="root">: diagnostic-implication-1 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-diagnostic-implication-1.xml.html b/Observation-diagnostic-implication-1.xml.html index b2495c40..9c4d36f4 100644 --- a/Observation-diagnostic-implication-1.xml.html +++ b/Observation-diagnostic-implication-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -373,7 +373,7 @@ <h2 id="root">: diagnostic-implication-1 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-example-observation-data-row-1.change.history.html b/Observation-example-observation-data-row-1.change.history.html index 0e1407d7..cbdb5d9a 100644 --- a/Observation-example-observation-data-row-1.change.history.html +++ b/Observation-example-observation-data-row-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Observation/example-observation-data-row-1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-example-observation-data-row-1.html b/Observation-example-observation-data-row-1.html index ce8b23f5..1bf613b5 100644 --- a/Observation-example-observation-data-row-1.html +++ b/Observation-example-observation-data-row-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -333,7 +333,7 @@ <h3>Notes:</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-example-observation-data-row-1.json b/Observation-example-observation-data-row-1.json index 7fd1ea26..6fbb9b98 100644 --- a/Observation-example-observation-data-row-1.json +++ b/Observation-example-observation-data-row-1.json @@ -1,90 +1,74 @@ -{ - "resourceType": "Observation", - "id": "example-observation-data-row-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"example-observation-data-row-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "example-observation-data-row-1" </p></div><p><b>status</b>: final</p><p><b>code</b>: demographics <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-dataset-codesystem-1.html\">Dataset CodeSystem (lists all tables)</a>#demographics)</span></p><p><b>subject</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p><p><b>specimen</b>: <a href=\"Specimen-ncpi-research-study-01-specimen-01.html\">Specimen/ncpi-research-study-01-specimen-01</a></p><blockquote><p><b>component</b></p><p><b>code</b>: Subject's Unique Identifier <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#subjectid)</span></p><p><b>value</b>: SUB0001</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Gender <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#gender)</span></p><p><b>value</b>: female <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://hl7.org/fhir/R4/codesystem-administrative-gender.html\">AdministrativeGender</a>#female)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Subject's BMI, Measured at Enrollment <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#bmi)</span></p><p><b>value</b>: 34.1 kg/m2<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code kg/m2 = 'kg/m2')</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Subject's status (Case or Control) <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#status)</span></p><p><b>value</b>: Case <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C99269)</span></p></blockquote></div>" - }, - "status": "final", - "code": { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1", - "code": "demographics" - } - ] - }, - "subject": { - "reference": "Patient/ncpi-research-study-01-patient-01" - }, - "specimen": { - "reference": "Specimen/ncpi-research-study-01-specimen-01" - }, - "component": [ - { - "code": { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "code": "subjectid" - } - ] - }, - "valueString": "SUB0001" - }, - { - "code": { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "code": "gender" - } - ] - }, - "valueCodeableConcept": { - "coding": [ - { - "system": "http://hl7.org/fhir/administrative-gender", - "code": "female", - "display": "female" - } - ] - } - }, - { - "code": { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "code": "bmi" - } - ] - }, - "valueQuantity": { - "value": 34.1, - "unit": "kg/m2", - "system": "http://unitsofmeasure.org", - "code": "kg/m2" - } - }, - { - "code": { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "code": "status" - } - ] - }, - "valueCodeableConcept": { - "coding": [ - { - "system": "https://uts.nlm.nih.gov/uts/umls", - "code": "C99269", - "display": "Case" - } - ] - } - } - ] +{ + "resourceType" : "Observation", + "id" : "example-observation-data-row-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"example-observation-data-row-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "example-observation-data-row-1" </p></div><p><b>status</b>: final</p><p><b>code</b>: demographics <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-dataset-codesystem-1.html\">Dataset CodeSystem (lists all tables)</a>#demographics)</span></p><p><b>subject</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p><p><b>specimen</b>: <a href=\"Specimen-ncpi-research-study-01-specimen-01.html\">Specimen/ncpi-research-study-01-specimen-01</a></p><blockquote><p><b>component</b></p><p><b>code</b>: Subject's Unique Identifier <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#subjectid)</span></p><p><b>value</b>: SUB0001</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Gender <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#gender)</span></p><p><b>value</b>: female <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://hl7.org/fhir/R4/codesystem-administrative-gender.html\">AdministrativeGender</a>#female)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Subject's BMI, Measured at Enrollment <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#bmi)</span></p><p><b>value</b>: 34.1 kg/m2<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code kg/m2 = 'kg/m2')</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Subject's status (Case or Control) <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#status)</span></p><p><b>value</b>: Case <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C99269)</span></p></blockquote></div>" + }, + "status" : "final", + "code" : { + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1", + "code" : "demographics" + }] + }, + "subject" : { + "reference" : "Patient/ncpi-research-study-01-patient-01" + }, + "specimen" : { + "reference" : "Specimen/ncpi-research-study-01-specimen-01" + }, + "component" : [{ + "code" : { + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "code" : "subjectid" + }] + }, + "valueString" : "SUB0001" + }, + { + "code" : { + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "code" : "gender" + }] + }, + "valueCodeableConcept" : { + "coding" : [{ + "system" : "http://hl7.org/fhir/administrative-gender", + "code" : "female", + "display" : "female" + }] + } + }, + { + "code" : { + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "code" : "bmi" + }] + }, + "valueQuantity" : { + "value" : 34.1, + "unit" : "kg/m2", + "system" : "http://unitsofmeasure.org", + "code" : "kg/m2" + } + }, + { + "code" : { + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "code" : "status" + }] + }, + "valueCodeableConcept" : { + "coding" : [{ + "system" : "https://uts.nlm.nih.gov/uts/umls", + "code" : "C99269", + "display" : "Case" + }] + } + }] } \ No newline at end of file diff --git a/Observation-example-observation-data-row-1.json.html b/Observation-example-observation-data-row-1.json.html index 458f1362..0d1eec54 100644 --- a/Observation-example-observation-data-row-1.json.html +++ b/Observation-example-observation-data-row-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -402,7 +402,7 @@ <h2 id="root">: Example of Raw Data - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-example-observation-data-row-1.ttl b/Observation-example-observation-data-row-1.ttl index edbbfd35..20cf8e11 100644 --- a/Observation-example-observation-data-row-1.ttl +++ b/Observation-example-observation-data-row-1.ttl @@ -7,27 +7,27 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Observation/example-observation-data-row-1> a fhir:Observation; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "example-observation-data-row-1"]; + fhir:Resource.id [ fhir:value "example-observation-data-row-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"example-observation-data-row-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "example-observation-data-row-1" </p></div><p><b>status</b>: final</p><p><b>code</b>: demographics <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-dataset-codesystem-1.html\">Dataset CodeSystem (lists all tables)</a>#demographics)</span></p><p><b>subject</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p><p><b>specimen</b>: <a href=\"Specimen-ncpi-research-study-01-specimen-01.html\">Specimen/ncpi-research-study-01-specimen-01</a></p><blockquote><p><b>component</b></p><p><b>code</b>: Subject's Unique Identifier <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#subjectid)</span></p><p><b>value</b>: SUB0001</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Gender <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#gender)</span></p><p><b>value</b>: female <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://hl7.org/fhir/R4/codesystem-administrative-gender.html\">AdministrativeGender</a>#female)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Subject's BMI, Measured at Enrollment <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#bmi)</span></p><p><b>value</b>: 34.1 kg/m2<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code kg/m2 = 'kg/m2')</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Subject's status (Case or Control) <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#status)</span></p><p><b>value</b>: Case <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C99269)</span></p></blockquote></div>" - ]; - fhir:Observation.status [ fhir:value "final"]; + ]; # + fhir:Observation.status [ fhir:value "final"]; # fhir:Observation.code [ fhir:CodeableConcept.coding [ fhir:index 0; fhir:Coding.system [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1" ]; fhir:Coding.code [ fhir:value "demographics" ] ] - ]; + ]; # fhir:Observation.subject [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/ncpi-research-study-01-patient-01>; fhir:Reference.reference [ fhir:value "Patient/ncpi-research-study-01-patient-01" ] - ]; + ]; # fhir:Observation.specimen [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Specimen/ncpi-research-study-01-specimen-01>; fhir:Reference.reference [ fhir:value "Specimen/ncpi-research-study-01-specimen-01" ] - ]; + ]; # fhir:Observation.component [ fhir:index 0; fhir:Observation.component.code [ @@ -87,7 +87,7 @@ fhir:Coding.display [ fhir:value "Case" ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Observation-example-observation-data-row-1.ttl.html b/Observation-example-observation-data-row-1.ttl.html index 1b33d1a8..db76803d 100644 --- a/Observation-example-observation-data-row-1.ttl.html +++ b/Observation-example-observation-data-row-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,24 +292,24 @@ <h2 id="root">: Example of Raw Data - TTL Representation</h2> a fhir:Observation; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "example-observation-data-row-1"]; + <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "example-observation-data-row-1"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"example-observation-data-row-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation &quot;example-observation-data-row-1&quot; </p></div><p><b>status</b>: final</p><p><b>code</b>: demographics <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-dataset-codesystem-1.html\">Dataset CodeSystem (lists all tables)</a>#demographics)</span></p><p><b>subject</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p><p><b>specimen</b>: <a href=\"Specimen-ncpi-research-study-01-specimen-01.html\">Specimen/ncpi-research-study-01-specimen-01</a></p><blockquote><p><b>component</b></p><p><b>code</b>: Subject's Unique Identifier <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#subjectid)</span></p><p><b>value</b>: SUB0001</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Gender <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#gender)</span></p><p><b>value</b>: female <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://hl7.org/fhir/R4/codesystem-administrative-gender.html\">AdministrativeGender</a>#female)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Subject's BMI, Measured at Enrollment <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#bmi)</span></p><p><b>value</b>: 34.1 kg/m2<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code kg/m2 = 'kg/m2')</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Subject's status (Case or Control) <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#status)</span></p><p><b>value</b>: Case <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C99269)</span></p></blockquote></div>" - ]; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; + ]; # + <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.code">fhir:Observation.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "demographics" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.subject">fhir:Observation.subject</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/ncpi-research-study-01-patient-01" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.specimen">fhir:Observation.specimen</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Specimen/ncpi-research-study-01-specimen-01" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.component">fhir:Observation.component</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/observation.html#Observation.component.code">fhir:Observation.component.code</a> [ @@ -356,7 +356,7 @@ <h2 id="root">: Example of Raw Data - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://uts.nlm.nih.gov/uts/umls" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "C99269" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Case" ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -394,7 +394,7 @@ <h2 id="root">: Example of Raw Data - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-example-observation-data-row-1.xml.html b/Observation-example-observation-data-row-1.xml.html index 16f74d8f..24bfaeaa 100644 --- a/Observation-example-observation-data-row-1.xml.html +++ b/Observation-example-observation-data-row-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -391,7 +391,7 @@ <h2 id="root">: Example of Raw Data - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-example-study-summary-gender.change.history.html b/Observation-example-study-summary-gender.change.history.html index 9dda68e5..69155c59 100644 --- a/Observation-example-study-summary-gender.change.history.html +++ b/Observation-example-study-summary-gender.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Observation/example-study-summary-gender - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-example-study-summary-gender.html b/Observation-example-study-summary-gender.html index 7f6d52e1..2b0992d7 100644 --- a/Observation-example-study-summary-gender.html +++ b/Observation-example-study-summary-gender.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -337,7 +337,7 @@ <h3>Notes:</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-example-study-summary-gender.json b/Observation-example-study-summary-gender.json index a7a49a53..dc0332b9 100644 --- a/Observation-example-study-summary-gender.json +++ b/Observation-example-study-summary-gender.json @@ -1,80 +1,64 @@ -{ - "resourceType": "Observation", - "id": "example-study-summary-gender", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-variable-summary" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"example-study-summary-gender\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "example-study-summary-gender" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-variable-summary.html\">Study Variable Summary</a></p></div><p><b>status</b>: final</p><p><b>code</b>: Summary Report <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C0242482)</span></p><p><b>subject</b>: <a href=\"Group-example-summary-group-1.html\">Group/example-summary-group-1</a></p><p><b>focus</b>: <a href=\"ResearchStudy-ncpi-research-study-01.html\">ResearchStudy/ncpi-research-study-01</a></p><p><b>value</b>: Gender <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C0079399; <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#gender)</span></p><blockquote><p><b>component</b></p><p><b>code</b>: Female <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://hl7.org/fhir/R4/codesystem-administrative-gender.html\">AdministrativeGender</a>#female)</span></p><p><b>value</b>: 205</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Male <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://hl7.org/fhir/R4/codesystem-administrative-gender.html\">AdministrativeGender</a>#male)</span></p><p><b>value</b>: 183</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Missing <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C1705492)</span></p><p><b>value</b>: 12</p></blockquote></div>" - }, - "status": "final", - "code": { - "coding": [ - { - "system": "https://uts.nlm.nih.gov/uts/umls", - "code": "C0242482", - "display": "Summary Report" - } - ] - }, - "subject": { - "reference": "Group/example-summary-group-1" - }, - "focus": [ - { - "reference": "ResearchStudy/ncpi-research-study-01" - } - ], - "valueCodeableConcept": { - "coding": [ - { - "system": "https://uts.nlm.nih.gov/uts/umls", - "code": "C0079399", - "display": "Gender" - }, - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "code": "gender" - } - ] - }, - "component": [ - { - "code": { - "coding": [ - { - "system": "http://hl7.org/fhir/administrative-gender", - "code": "female" - } - ] - }, - "valueInteger": 205 - }, - { - "code": { - "coding": [ - { - "system": "http://hl7.org/fhir/administrative-gender", - "code": "male" - } - ] - }, - "valueInteger": 183 - }, - { - "code": { - "coding": [ - { - "system": "https://uts.nlm.nih.gov/uts/umls", - "code": "C1705492", - "display": "Missing" - } - ] - }, - "valueInteger": 12 - } - ] +{ + "resourceType" : "Observation", + "id" : "example-study-summary-gender", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-variable-summary"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"example-study-summary-gender\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "example-study-summary-gender" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-variable-summary.html\">Study Variable Summary</a></p></div><p><b>status</b>: final</p><p><b>code</b>: Summary Report <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C0242482)</span></p><p><b>subject</b>: <a href=\"Group-example-summary-group-1.html\">Group/example-summary-group-1</a></p><p><b>focus</b>: <a href=\"ResearchStudy-ncpi-research-study-01.html\">ResearchStudy/ncpi-research-study-01</a></p><p><b>value</b>: Gender <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C0079399; <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#gender)</span></p><blockquote><p><b>component</b></p><p><b>code</b>: Female <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://hl7.org/fhir/R4/codesystem-administrative-gender.html\">AdministrativeGender</a>#female)</span></p><p><b>value</b>: 205</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Male <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://hl7.org/fhir/R4/codesystem-administrative-gender.html\">AdministrativeGender</a>#male)</span></p><p><b>value</b>: 183</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Missing <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C1705492)</span></p><p><b>value</b>: 12</p></blockquote></div>" + }, + "status" : "final", + "code" : { + "coding" : [{ + "system" : "https://uts.nlm.nih.gov/uts/umls", + "code" : "C0242482", + "display" : "Summary Report" + }] + }, + "subject" : { + "reference" : "Group/example-summary-group-1" + }, + "focus" : [{ + "reference" : "ResearchStudy/ncpi-research-study-01" + }], + "valueCodeableConcept" : { + "coding" : [{ + "system" : "https://uts.nlm.nih.gov/uts/umls", + "code" : "C0079399", + "display" : "Gender" + }, + { + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "code" : "gender" + }] + }, + "component" : [{ + "code" : { + "coding" : [{ + "system" : "http://hl7.org/fhir/administrative-gender", + "code" : "female" + }] + }, + "valueInteger" : 205 + }, + { + "code" : { + "coding" : [{ + "system" : "http://hl7.org/fhir/administrative-gender", + "code" : "male" + }] + }, + "valueInteger" : 183 + }, + { + "code" : { + "coding" : [{ + "system" : "https://uts.nlm.nih.gov/uts/umls", + "code" : "C1705492", + "display" : "Missing" + }] + }, + "valueInteger" : 12 + }] } \ No newline at end of file diff --git a/Observation-example-study-summary-gender.json.html b/Observation-example-study-summary-gender.json.html index 50388b58..98307766 100644 --- a/Observation-example-study-summary-gender.json.html +++ b/Observation-example-study-summary-gender.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -392,7 +392,7 @@ <h2 id="root">: Example Variable Summary with categories (gender) - JSON Represe <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-example-study-summary-gender.ttl b/Observation-example-study-summary-gender.ttl index bc232f0e..dd32181d 100644 --- a/Observation-example-study-summary-gender.ttl +++ b/Observation-example-study-summary-gender.ttl @@ -7,19 +7,19 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Observation/example-study-summary-gender> a fhir:Observation; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "example-study-summary-gender"]; + fhir:Resource.id [ fhir:value "example-study-summary-gender"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-variable-summary"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-variable-summary> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"example-study-summary-gender\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "example-study-summary-gender" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-variable-summary.html\">Study Variable Summary</a></p></div><p><b>status</b>: final</p><p><b>code</b>: Summary Report <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C0242482)</span></p><p><b>subject</b>: <a href=\"Group-example-summary-group-1.html\">Group/example-summary-group-1</a></p><p><b>focus</b>: <a href=\"ResearchStudy-ncpi-research-study-01.html\">ResearchStudy/ncpi-research-study-01</a></p><p><b>value</b>: Gender <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C0079399; <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#gender)</span></p><blockquote><p><b>component</b></p><p><b>code</b>: Female <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://hl7.org/fhir/R4/codesystem-administrative-gender.html\">AdministrativeGender</a>#female)</span></p><p><b>value</b>: 205</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Male <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://hl7.org/fhir/R4/codesystem-administrative-gender.html\">AdministrativeGender</a>#male)</span></p><p><b>value</b>: 183</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Missing <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C1705492)</span></p><p><b>value</b>: 12</p></blockquote></div>" - ]; - fhir:Observation.status [ fhir:value "final"]; + ]; # + fhir:Observation.status [ fhir:value "final"]; # fhir:Observation.code [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -27,16 +27,16 @@ fhir:Coding.code [ fhir:value "C0242482" ]; fhir:Coding.display [ fhir:value "Summary Report" ] ] - ]; + ]; # fhir:Observation.subject [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Group/example-summary-group-1>; fhir:Reference.reference [ fhir:value "Group/example-summary-group-1" ] - ]; + ]; # fhir:Observation.focus [ fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/ResearchStudy/ncpi-research-study-01>; fhir:Reference.reference [ fhir:value "ResearchStudy/ncpi-research-study-01" ] - ]; + ]; # fhir:Observation.valueCodeableConcept [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -48,7 +48,7 @@ fhir:Coding.system [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1" ]; fhir:Coding.code [ fhir:value "gender" ] ] - ]; + ]; # fhir:Observation.component [ fhir:index 0; fhir:Observation.component.code [ @@ -80,7 +80,7 @@ ] ]; fhir:Observation.component.valueInteger [ fhir:value "12"^^xsd:integer ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Observation-example-study-summary-gender.ttl.html b/Observation-example-study-summary-gender.ttl.html index 2d3f0e91..292fe06e 100644 --- a/Observation-example-study-summary-gender.ttl.html +++ b/Observation-example-study-summary-gender.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,32 +292,32 @@ <h2 id="root">: Example Variable Summary with categories (gender) - TTL Represen a fhir:Observation; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "example-study-summary-gender"]; + <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "example-study-summary-gender"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-variable-summary"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-variable-summary> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"example-study-summary-gender\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation &quot;example-study-summary-gender&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-variable-summary.html\">Study Variable Summary</a></p></div><p><b>status</b>: final</p><p><b>code</b>: Summary Report <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C0242482)</span></p><p><b>subject</b>: <a href=\"Group-example-summary-group-1.html\">Group/example-summary-group-1</a></p><p><b>focus</b>: <a href=\"ResearchStudy-ncpi-research-study-01.html\">ResearchStudy/ncpi-research-study-01</a></p><p><b>value</b>: Gender <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C0079399; <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#gender)</span></p><blockquote><p><b>component</b></p><p><b>code</b>: Female <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://hl7.org/fhir/R4/codesystem-administrative-gender.html\">AdministrativeGender</a>#female)</span></p><p><b>value</b>: 205</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Male <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://hl7.org/fhir/R4/codesystem-administrative-gender.html\">AdministrativeGender</a>#male)</span></p><p><b>value</b>: 183</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Missing <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (umls#C1705492)</span></p><p><b>value</b>: 12</p></blockquote></div>" - ]; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; + ]; # + <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.code">fhir:Observation.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://uts.nlm.nih.gov/uts/umls" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "C0242482" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Summary Report" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.subject">fhir:Observation.subject</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Group/example-summary-group-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.focus">fhir:Observation.focus</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ResearchStudy/ncpi-research-study-01" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.value[x]">fhir:Observation.valueCodeableConcept</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -327,7 +327,7 @@ <h2 id="root">: Example Variable Summary with categories (gender) - TTL Represen <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "gender" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.component">fhir:Observation.component</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/observation.html#Observation.component.code">fhir:Observation.component.code</a> [ @@ -353,7 +353,7 @@ <h2 id="root">: Example Variable Summary with categories (gender) - TTL Represen <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "C1705492" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Missing" ] ] ]; <a href="http://hl7.org/fhir/R4/observation.html#Observation.component.value[x]">fhir:Observation.component.valueInteger</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#integer">fhir:value</a> "12"^^xsd:integer ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -391,7 +391,7 @@ <h2 id="root">: Example Variable Summary with categories (gender) - TTL Represen <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-example-study-summary-gender.xml.html b/Observation-example-study-summary-gender.xml.html index f3344f4b..c43be9f3 100644 --- a/Observation-example-study-summary-gender.xml.html +++ b/Observation-example-study-summary-gender.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -378,7 +378,7 @@ <h2 id="root">: Example Variable Summary with categories (gender) - XML Represen <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-1.change.history.html b/Observation-family-relationship-example-1.change.history.html index 0b4aeb77..237ac9cf 100644 --- a/Observation-family-relationship-example-1.change.history.html +++ b/Observation-family-relationship-example-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Observation/family-relationship-example-1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-1.html b/Observation-family-relationship-example-1.html index 3b5a13b0..1e2f99bc 100644 --- a/Observation-family-relationship-example-1.html +++ b/Observation-family-relationship-example-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Observation: family-relationship-example-1</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-1.json b/Observation-family-relationship-example-1.json index 44574a2c..32b6f93f 100644 --- a/Observation-family-relationship-example-1.json +++ b/Observation-family-relationship-example-1.json @@ -1,41 +1,33 @@ -{ - "resourceType": "Observation", - "id": "family-relationship-example-1", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"family-relationship-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "family-relationship-example-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-family-relationship.html\">NCPI Family Relationship</a></p></div><p><b>status</b>: final</p><p><b>code</b>: family member <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FAMMEMB)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>focus</b>: <a href=\"Patient-patient-example-2.html\">Patient/patient-example-2</a> " SMITH"</p><p><b>value</b>: Child <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#CHILD "child")</span></p></div>" - }, - "status": "final", - "code": { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/v3-RoleCode", - "code": "FAMMEMB", - "display": "family member" - } - ] - }, - "subject": { - "reference": "Patient/patient-example-1" - }, - "focus": [ - { - "reference": "Patient/patient-example-2" - } - ], - "valueCodeableConcept": { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/v3-RoleCode", - "code": "CHILD", - "display": "child" - } - ], - "text": "Child" - } +{ + "resourceType" : "Observation", + "id" : "family-relationship-example-1", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"family-relationship-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "family-relationship-example-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-family-relationship.html\">NCPI Family Relationship</a></p></div><p><b>status</b>: final</p><p><b>code</b>: family member <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FAMMEMB)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>focus</b>: <a href=\"Patient-patient-example-2.html\">Patient/patient-example-2</a> " SMITH"</p><p><b>value</b>: Child <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#CHILD "child")</span></p></div>" + }, + "status" : "final", + "code" : { + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/v3-RoleCode", + "code" : "FAMMEMB", + "display" : "family member" + }] + }, + "subject" : { + "reference" : "Patient/patient-example-1" + }, + "focus" : [{ + "reference" : "Patient/patient-example-2" + }], + "valueCodeableConcept" : { + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/v3-RoleCode", + "code" : "CHILD", + "display" : "child" + }], + "text" : "Child" + } } \ No newline at end of file diff --git a/Observation-family-relationship-example-1.json.html b/Observation-family-relationship-example-1.json.html index 4342c944..ace71a90 100644 --- a/Observation-family-relationship-example-1.json.html +++ b/Observation-family-relationship-example-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -353,7 +353,7 @@ <h2 id="root">: family-relationship-example-1 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-1.ttl b/Observation-family-relationship-example-1.ttl index 4ba1909e..6f9d3ba5 100644 --- a/Observation-family-relationship-example-1.ttl +++ b/Observation-family-relationship-example-1.ttl @@ -7,19 +7,19 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Observation/family-relationship-example-1> a fhir:Observation; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "family-relationship-example-1"]; + fhir:Resource.id [ fhir:value "family-relationship-example-1"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"family-relationship-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "family-relationship-example-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-family-relationship.html\">NCPI Family Relationship</a></p></div><p><b>status</b>: final</p><p><b>code</b>: family member <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FAMMEMB)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>focus</b>: <a href=\"Patient-patient-example-2.html\">Patient/patient-example-2</a> " SMITH"</p><p><b>value</b>: Child <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#CHILD "child")</span></p></div>" - ]; - fhir:Observation.status [ fhir:value "final"]; + ]; # + fhir:Observation.status [ fhir:value "final"]; # fhir:Observation.code [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -27,16 +27,16 @@ fhir:Coding.code [ fhir:value "FAMMEMB" ]; fhir:Coding.display [ fhir:value "family member" ] ] - ]; + ]; # fhir:Observation.subject [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-1>; fhir:Reference.reference [ fhir:value "Patient/patient-example-1" ] - ]; + ]; # fhir:Observation.focus [ fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-2>; fhir:Reference.reference [ fhir:value "Patient/patient-example-2" ] - ]; + ]; # fhir:Observation.valueCodeableConcept [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -45,7 +45,7 @@ fhir:Coding.display [ fhir:value "child" ] ]; fhir:CodeableConcept.text [ fhir:value "Child" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Observation-family-relationship-example-1.ttl.html b/Observation-family-relationship-example-1.ttl.html index 9b5973a3..16bf9473 100644 --- a/Observation-family-relationship-example-1.ttl.html +++ b/Observation-family-relationship-example-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,32 +292,32 @@ <h2 id="root">: family-relationship-example-1 - TTL Representation</h2> a fhir:Observation; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "family-relationship-example-1"]; + <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "family-relationship-example-1"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"family-relationship-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation &quot;family-relationship-example-1&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-family-relationship.html\">NCPI Family Relationship</a></p></div><p><b>status</b>: final</p><p><b>code</b>: family member <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FAMMEMB)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> &quot; SMITH&quot;</p><p><b>focus</b>: <a href=\"Patient-patient-example-2.html\">Patient/patient-example-2</a> &quot; SMITH&quot;</p><p><b>value</b>: Child <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#CHILD &quot;child&quot;)</span></p></div>" - ]; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; + ]; # + <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.code">fhir:Observation.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://terminology.hl7.org/CodeSystem/v3-RoleCode" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "FAMMEMB" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "family member" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.subject">fhir:Observation.subject</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/patient-example-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.focus">fhir:Observation.focus</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/patient-example-2" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.value[x]">fhir:Observation.valueCodeableConcept</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -325,7 +325,7 @@ <h2 id="root">: family-relationship-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "CHILD" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "child" ] ]; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.text">fhir:CodeableConcept.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Child" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -363,7 +363,7 @@ <h2 id="root">: family-relationship-example-1 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-1.xml.html b/Observation-family-relationship-example-1.xml.html index 41f7873b..57fc57a5 100644 --- a/Observation-family-relationship-example-1.xml.html +++ b/Observation-family-relationship-example-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -346,7 +346,7 @@ <h2 id="root">: family-relationship-example-1 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-2.change.history.html b/Observation-family-relationship-example-2.change.history.html index cb559a64..7973598c 100644 --- a/Observation-family-relationship-example-2.change.history.html +++ b/Observation-family-relationship-example-2.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Observation/family-relationship-example-2 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-2.html b/Observation-family-relationship-example-2.html index 8ad6a58a..b1473008 100644 --- a/Observation-family-relationship-example-2.html +++ b/Observation-family-relationship-example-2.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Observation: family-relationship-example-2</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-2.json b/Observation-family-relationship-example-2.json index dc42afff..923e1991 100644 --- a/Observation-family-relationship-example-2.json +++ b/Observation-family-relationship-example-2.json @@ -1,41 +1,33 @@ -{ - "resourceType": "Observation", - "id": "family-relationship-example-2", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"family-relationship-example-2\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "family-relationship-example-2" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-family-relationship.html\">NCPI Family Relationship</a></p></div><p><b>status</b>: final</p><p><b>code</b>: family member <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FAMMEMB)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>focus</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> " SMITH"</p><p><b>value</b>: Child <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#CHILD "child")</span></p></div>" - }, - "status": "final", - "code": { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/v3-RoleCode", - "code": "FAMMEMB", - "display": "family member" - } - ] - }, - "subject": { - "reference": "Patient/patient-example-1" - }, - "focus": [ - { - "reference": "Patient/patient-example-3" - } - ], - "valueCodeableConcept": { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/v3-RoleCode", - "code": "CHILD", - "display": "child" - } - ], - "text": "Child" - } +{ + "resourceType" : "Observation", + "id" : "family-relationship-example-2", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"family-relationship-example-2\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "family-relationship-example-2" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-family-relationship.html\">NCPI Family Relationship</a></p></div><p><b>status</b>: final</p><p><b>code</b>: family member <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FAMMEMB)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>focus</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> " SMITH"</p><p><b>value</b>: Child <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#CHILD "child")</span></p></div>" + }, + "status" : "final", + "code" : { + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/v3-RoleCode", + "code" : "FAMMEMB", + "display" : "family member" + }] + }, + "subject" : { + "reference" : "Patient/patient-example-1" + }, + "focus" : [{ + "reference" : "Patient/patient-example-3" + }], + "valueCodeableConcept" : { + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/v3-RoleCode", + "code" : "CHILD", + "display" : "child" + }], + "text" : "Child" + } } \ No newline at end of file diff --git a/Observation-family-relationship-example-2.json.html b/Observation-family-relationship-example-2.json.html index 4ea256da..58c0df5a 100644 --- a/Observation-family-relationship-example-2.json.html +++ b/Observation-family-relationship-example-2.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -353,7 +353,7 @@ <h2 id="root">: family-relationship-example-2 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-2.ttl b/Observation-family-relationship-example-2.ttl index 3e9b7682..146fbc28 100644 --- a/Observation-family-relationship-example-2.ttl +++ b/Observation-family-relationship-example-2.ttl @@ -7,19 +7,19 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Observation/family-relationship-example-2> a fhir:Observation; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "family-relationship-example-2"]; + fhir:Resource.id [ fhir:value "family-relationship-example-2"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"family-relationship-example-2\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "family-relationship-example-2" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-family-relationship.html\">NCPI Family Relationship</a></p></div><p><b>status</b>: final</p><p><b>code</b>: family member <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FAMMEMB)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>focus</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> " SMITH"</p><p><b>value</b>: Child <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#CHILD "child")</span></p></div>" - ]; - fhir:Observation.status [ fhir:value "final"]; + ]; # + fhir:Observation.status [ fhir:value "final"]; # fhir:Observation.code [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -27,16 +27,16 @@ fhir:Coding.code [ fhir:value "FAMMEMB" ]; fhir:Coding.display [ fhir:value "family member" ] ] - ]; + ]; # fhir:Observation.subject [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-1>; fhir:Reference.reference [ fhir:value "Patient/patient-example-1" ] - ]; + ]; # fhir:Observation.focus [ fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-3>; fhir:Reference.reference [ fhir:value "Patient/patient-example-3" ] - ]; + ]; # fhir:Observation.valueCodeableConcept [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -45,7 +45,7 @@ fhir:Coding.display [ fhir:value "child" ] ]; fhir:CodeableConcept.text [ fhir:value "Child" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Observation-family-relationship-example-2.ttl.html b/Observation-family-relationship-example-2.ttl.html index 648b2b12..a3d36b38 100644 --- a/Observation-family-relationship-example-2.ttl.html +++ b/Observation-family-relationship-example-2.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,32 +292,32 @@ <h2 id="root">: family-relationship-example-2 - TTL Representation</h2> a fhir:Observation; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "family-relationship-example-2"]; + <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "family-relationship-example-2"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"family-relationship-example-2\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation &quot;family-relationship-example-2&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-family-relationship.html\">NCPI Family Relationship</a></p></div><p><b>status</b>: final</p><p><b>code</b>: family member <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FAMMEMB)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> &quot; SMITH&quot;</p><p><b>focus</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> &quot; SMITH&quot;</p><p><b>value</b>: Child <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#CHILD &quot;child&quot;)</span></p></div>" - ]; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; + ]; # + <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.code">fhir:Observation.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://terminology.hl7.org/CodeSystem/v3-RoleCode" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "FAMMEMB" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "family member" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.subject">fhir:Observation.subject</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/patient-example-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.focus">fhir:Observation.focus</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/patient-example-3" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.value[x]">fhir:Observation.valueCodeableConcept</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -325,7 +325,7 @@ <h2 id="root">: family-relationship-example-2 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "CHILD" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "child" ] ]; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.text">fhir:CodeableConcept.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Child" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -363,7 +363,7 @@ <h2 id="root">: family-relationship-example-2 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-2.xml.html b/Observation-family-relationship-example-2.xml.html index 8f2e26c6..feadfe06 100644 --- a/Observation-family-relationship-example-2.xml.html +++ b/Observation-family-relationship-example-2.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -346,7 +346,7 @@ <h2 id="root">: family-relationship-example-2 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-3.change.history.html b/Observation-family-relationship-example-3.change.history.html index aa46827c..31a7c7f9 100644 --- a/Observation-family-relationship-example-3.change.history.html +++ b/Observation-family-relationship-example-3.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Observation/family-relationship-example-3 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-3.html b/Observation-family-relationship-example-3.html index 3899b115..16c15aa4 100644 --- a/Observation-family-relationship-example-3.html +++ b/Observation-family-relationship-example-3.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Observation: family-relationship-example-3</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-3.json b/Observation-family-relationship-example-3.json index 97edde32..48df9e94 100644 --- a/Observation-family-relationship-example-3.json +++ b/Observation-family-relationship-example-3.json @@ -1,46 +1,38 @@ -{ - "resourceType": "Observation", - "id": "family-relationship-example-3", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"family-relationship-example-3\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "family-relationship-example-3" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-family-relationship.html\">NCPI Family Relationship</a></p></div><p><b>status</b>: final</p><p><b>code</b>: family member <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FAMMEMB)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-2.html\">Patient/patient-example-2</a> " SMITH"</p><p><b>focus</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>value</b>: Mother <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#PRN "parent"; <a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#MTH "mother")</span></p></div>" - }, - "status": "final", - "code": { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/v3-RoleCode", - "code": "FAMMEMB", - "display": "family member" - } - ] - }, - "subject": { - "reference": "Patient/patient-example-2" - }, - "focus": [ - { - "reference": "Patient/patient-example-1" - } - ], - "valueCodeableConcept": { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/v3-RoleCode", - "code": "PRN", - "display": "parent" - }, - { - "system": "http://terminology.hl7.org/CodeSystem/v3-RoleCode", - "code": "MTH", - "display": "mother" - } - ], - "text": "Mother" - } +{ + "resourceType" : "Observation", + "id" : "family-relationship-example-3", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"family-relationship-example-3\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "family-relationship-example-3" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-family-relationship.html\">NCPI Family Relationship</a></p></div><p><b>status</b>: final</p><p><b>code</b>: family member <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FAMMEMB)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-2.html\">Patient/patient-example-2</a> " SMITH"</p><p><b>focus</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>value</b>: Mother <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#PRN "parent"; <a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#MTH "mother")</span></p></div>" + }, + "status" : "final", + "code" : { + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/v3-RoleCode", + "code" : "FAMMEMB", + "display" : "family member" + }] + }, + "subject" : { + "reference" : "Patient/patient-example-2" + }, + "focus" : [{ + "reference" : "Patient/patient-example-1" + }], + "valueCodeableConcept" : { + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/v3-RoleCode", + "code" : "PRN", + "display" : "parent" + }, + { + "system" : "http://terminology.hl7.org/CodeSystem/v3-RoleCode", + "code" : "MTH", + "display" : "mother" + }], + "text" : "Mother" + } } \ No newline at end of file diff --git a/Observation-family-relationship-example-3.json.html b/Observation-family-relationship-example-3.json.html index 86947a79..3dc0f811 100644 --- a/Observation-family-relationship-example-3.json.html +++ b/Observation-family-relationship-example-3.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -358,7 +358,7 @@ <h2 id="root">: family-relationship-example-3 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-3.ttl b/Observation-family-relationship-example-3.ttl index c3799d3d..ee9f4681 100644 --- a/Observation-family-relationship-example-3.ttl +++ b/Observation-family-relationship-example-3.ttl @@ -7,19 +7,19 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Observation/family-relationship-example-3> a fhir:Observation; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "family-relationship-example-3"]; + fhir:Resource.id [ fhir:value "family-relationship-example-3"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"family-relationship-example-3\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "family-relationship-example-3" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-family-relationship.html\">NCPI Family Relationship</a></p></div><p><b>status</b>: final</p><p><b>code</b>: family member <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FAMMEMB)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-2.html\">Patient/patient-example-2</a> " SMITH"</p><p><b>focus</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>value</b>: Mother <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#PRN "parent"; <a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#MTH "mother")</span></p></div>" - ]; - fhir:Observation.status [ fhir:value "final"]; + ]; # + fhir:Observation.status [ fhir:value "final"]; # fhir:Observation.code [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -27,16 +27,16 @@ fhir:Coding.code [ fhir:value "FAMMEMB" ]; fhir:Coding.display [ fhir:value "family member" ] ] - ]; + ]; # fhir:Observation.subject [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-2>; fhir:Reference.reference [ fhir:value "Patient/patient-example-2" ] - ]; + ]; # fhir:Observation.focus [ fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-1>; fhir:Reference.reference [ fhir:value "Patient/patient-example-1" ] - ]; + ]; # fhir:Observation.valueCodeableConcept [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -50,7 +50,7 @@ fhir:Coding.display [ fhir:value "mother" ] ]; fhir:CodeableConcept.text [ fhir:value "Mother" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Observation-family-relationship-example-3.ttl.html b/Observation-family-relationship-example-3.ttl.html index d03dc5b8..2ff7f725 100644 --- a/Observation-family-relationship-example-3.ttl.html +++ b/Observation-family-relationship-example-3.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,32 +292,32 @@ <h2 id="root">: family-relationship-example-3 - TTL Representation</h2> a fhir:Observation; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "family-relationship-example-3"]; + <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "family-relationship-example-3"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"family-relationship-example-3\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation &quot;family-relationship-example-3&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-family-relationship.html\">NCPI Family Relationship</a></p></div><p><b>status</b>: final</p><p><b>code</b>: family member <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FAMMEMB)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-2.html\">Patient/patient-example-2</a> &quot; SMITH&quot;</p><p><b>focus</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> &quot; SMITH&quot;</p><p><b>value</b>: Mother <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#PRN &quot;parent&quot;; <a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#MTH &quot;mother&quot;)</span></p></div>" - ]; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; + ]; # + <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.code">fhir:Observation.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://terminology.hl7.org/CodeSystem/v3-RoleCode" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "FAMMEMB" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "family member" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.subject">fhir:Observation.subject</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/patient-example-2" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.focus">fhir:Observation.focus</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/patient-example-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.value[x]">fhir:Observation.valueCodeableConcept</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -329,7 +329,7 @@ <h2 id="root">: family-relationship-example-3 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "MTH" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "mother" ] ]; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.text">fhir:CodeableConcept.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Mother" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -367,7 +367,7 @@ <h2 id="root">: family-relationship-example-3 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-3.xml.html b/Observation-family-relationship-example-3.xml.html index 88dccf43..0d416c4c 100644 --- a/Observation-family-relationship-example-3.xml.html +++ b/Observation-family-relationship-example-3.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -351,7 +351,7 @@ <h2 id="root">: family-relationship-example-3 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-4.change.history.html b/Observation-family-relationship-example-4.change.history.html index ba886ebe..f5837617 100644 --- a/Observation-family-relationship-example-4.change.history.html +++ b/Observation-family-relationship-example-4.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Observation/family-relationship-example-4 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-4.html b/Observation-family-relationship-example-4.html index a53959da..77cfc6f5 100644 --- a/Observation-family-relationship-example-4.html +++ b/Observation-family-relationship-example-4.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Observation: family-relationship-example-4</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-4.json b/Observation-family-relationship-example-4.json index 060b1979..93976725 100644 --- a/Observation-family-relationship-example-4.json +++ b/Observation-family-relationship-example-4.json @@ -1,46 +1,38 @@ -{ - "resourceType": "Observation", - "id": "family-relationship-example-4", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"family-relationship-example-4\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "family-relationship-example-4" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-family-relationship.html\">NCPI Family Relationship</a></p></div><p><b>status</b>: final</p><p><b>code</b>: family member <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FAMMEMB)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> " SMITH"</p><p><b>focus</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>value</b>: Father <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#PRN "parent"; <a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FTH "father")</span></p></div>" - }, - "status": "final", - "code": { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/v3-RoleCode", - "code": "FAMMEMB", - "display": "family member" - } - ] - }, - "subject": { - "reference": "Patient/patient-example-3" - }, - "focus": [ - { - "reference": "Patient/patient-example-1" - } - ], - "valueCodeableConcept": { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/v3-RoleCode", - "code": "PRN", - "display": "parent" - }, - { - "system": "http://terminology.hl7.org/CodeSystem/v3-RoleCode", - "code": "FTH", - "display": "father" - } - ], - "text": "Father" - } +{ + "resourceType" : "Observation", + "id" : "family-relationship-example-4", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"family-relationship-example-4\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "family-relationship-example-4" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-family-relationship.html\">NCPI Family Relationship</a></p></div><p><b>status</b>: final</p><p><b>code</b>: family member <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FAMMEMB)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> " SMITH"</p><p><b>focus</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>value</b>: Father <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#PRN "parent"; <a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FTH "father")</span></p></div>" + }, + "status" : "final", + "code" : { + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/v3-RoleCode", + "code" : "FAMMEMB", + "display" : "family member" + }] + }, + "subject" : { + "reference" : "Patient/patient-example-3" + }, + "focus" : [{ + "reference" : "Patient/patient-example-1" + }], + "valueCodeableConcept" : { + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/v3-RoleCode", + "code" : "PRN", + "display" : "parent" + }, + { + "system" : "http://terminology.hl7.org/CodeSystem/v3-RoleCode", + "code" : "FTH", + "display" : "father" + }], + "text" : "Father" + } } \ No newline at end of file diff --git a/Observation-family-relationship-example-4.json.html b/Observation-family-relationship-example-4.json.html index 5b03614e..bb144820 100644 --- a/Observation-family-relationship-example-4.json.html +++ b/Observation-family-relationship-example-4.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -358,7 +358,7 @@ <h2 id="root">: family-relationship-example-4 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-4.ttl b/Observation-family-relationship-example-4.ttl index 9a403e9c..b63ee493 100644 --- a/Observation-family-relationship-example-4.ttl +++ b/Observation-family-relationship-example-4.ttl @@ -7,19 +7,19 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Observation/family-relationship-example-4> a fhir:Observation; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "family-relationship-example-4"]; + fhir:Resource.id [ fhir:value "family-relationship-example-4"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"family-relationship-example-4\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "family-relationship-example-4" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-family-relationship.html\">NCPI Family Relationship</a></p></div><p><b>status</b>: final</p><p><b>code</b>: family member <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FAMMEMB)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> " SMITH"</p><p><b>focus</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>value</b>: Father <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#PRN "parent"; <a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FTH "father")</span></p></div>" - ]; - fhir:Observation.status [ fhir:value "final"]; + ]; # + fhir:Observation.status [ fhir:value "final"]; # fhir:Observation.code [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -27,16 +27,16 @@ fhir:Coding.code [ fhir:value "FAMMEMB" ]; fhir:Coding.display [ fhir:value "family member" ] ] - ]; + ]; # fhir:Observation.subject [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-3>; fhir:Reference.reference [ fhir:value "Patient/patient-example-3" ] - ]; + ]; # fhir:Observation.focus [ fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-1>; fhir:Reference.reference [ fhir:value "Patient/patient-example-1" ] - ]; + ]; # fhir:Observation.valueCodeableConcept [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -50,7 +50,7 @@ fhir:Coding.display [ fhir:value "father" ] ]; fhir:CodeableConcept.text [ fhir:value "Father" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Observation-family-relationship-example-4.ttl.html b/Observation-family-relationship-example-4.ttl.html index fdae888e..e336d549 100644 --- a/Observation-family-relationship-example-4.ttl.html +++ b/Observation-family-relationship-example-4.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,32 +292,32 @@ <h2 id="root">: family-relationship-example-4 - TTL Representation</h2> a fhir:Observation; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "family-relationship-example-4"]; + <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "family-relationship-example-4"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"family-relationship-example-4\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation &quot;family-relationship-example-4&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-family-relationship.html\">NCPI Family Relationship</a></p></div><p><b>status</b>: final</p><p><b>code</b>: family member <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FAMMEMB)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> &quot; SMITH&quot;</p><p><b>focus</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> &quot; SMITH&quot;</p><p><b>value</b>: Father <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#PRN &quot;parent&quot;; <a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-RoleCode.html\">RoleCode</a>#FTH &quot;father&quot;)</span></p></div>" - ]; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; + ]; # + <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.code">fhir:Observation.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://terminology.hl7.org/CodeSystem/v3-RoleCode" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "FAMMEMB" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "family member" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.subject">fhir:Observation.subject</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/patient-example-3" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.focus">fhir:Observation.focus</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/patient-example-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.value[x]">fhir:Observation.valueCodeableConcept</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -329,7 +329,7 @@ <h2 id="root">: family-relationship-example-4 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "FTH" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "father" ] ]; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.text">fhir:CodeableConcept.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Father" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -367,7 +367,7 @@ <h2 id="root">: family-relationship-example-4 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-family-relationship-example-4.xml.html b/Observation-family-relationship-example-4.xml.html index 42414664..0602e538 100644 --- a/Observation-family-relationship-example-4.xml.html +++ b/Observation-family-relationship-example-4.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -351,7 +351,7 @@ <h2 id="root">: family-relationship-example-4 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-variant-example-1.change.history.html b/Observation-variant-example-1.change.history.html index 829d39a2..7bc7b6a7 100644 --- a/Observation-variant-example-1.change.history.html +++ b/Observation-variant-example-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Observation/variant-example-1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-variant-example-1.html b/Observation-variant-example-1.html index 819c5b36..768bdbbe 100644 --- a/Observation-variant-example-1.html +++ b/Observation-variant-example-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Observation: variant-example-1</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-variant-example-1.json b/Observation-variant-example-1.json index e738add2..dc573230 100644 --- a/Observation-variant-example-1.json +++ b/Observation-variant-example-1.json @@ -1,215 +1,173 @@ -{ - "resourceType": "Observation", - "id": "variant-example-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"variant-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "variant-example-1" </p></div><p><b>status</b>: final</p><p><b>category</b>: Laboratory <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-observation-category.html\">Observation Category Codes</a>#laboratory)</span></p><p><b>code</b>: Genetic variant assessment <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#69548-6)</span></p><p><b>value</b>: Present <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA9633-4)</span></p><p><b>method</b>: Sequencing <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA26398-0)</span></p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-1.html\">Specimen/specimen-example-1: Specimen</a></p><blockquote><p><b>component</b></p><p><b>code</b>: Gene studied ID <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#48018-6)</span></p><p><b>value</b>: HGNC:6518 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (gene#LBR)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Cytogenetic (chromosome) location <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#48001-2)</span></p><p><b>value</b>: Chr1 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (loinc-answers#LA21254-0)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Variant exact start and end <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-tbd-codes.html\">ToBeDeterminedCodes ('TbdCodes')</a>#exact-start-end)</span></p><p><b>value</b>: 225592153-?</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Genomic ref allele [ID] <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#69547-8)</span></p><p><b>value</b>: T</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Genomic alt allele [ID] <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#69551-0)</span></p><p><b>value</b>: C</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Allelic state <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#53034-5)</span></p><p><b>value</b>: Heterozygous <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA6706-1)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Human reference sequence assembly version <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#62374-4)</span></p><p><b>value</b>: GRCh37 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA14029-5)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Transcript reference sequence [ID] <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#51958-7)</span></p><p><b>value</b>: NM_002296.3 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-refSeq.html\">Gene Reference Sequence Collection</a>#NM_002296.3)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: DNA change (c.HGVS) <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#48004-6)</span></p><p><b>value</b>: c.1640A>G <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-hgvs.html\">Human Genome Variation Society nomenclature</a>#c.1640A>G)</span></p></blockquote></div>" - }, - "status": "final", - "category": [ - { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/observation-category", - "code": "laboratory" - } - ] - } - ], - "code": { - "coding": [ - { - "system": "http://loinc.org", - "code": "69548-6", - "display": "Genetic variant assessment" - } - ] - }, - "valueCodeableConcept": { - "coding": [ - { - "system": "http://loinc.org", - "code": "LA9633-4", - "display": "Present" - } - ] - }, - "method": { - "coding": [ - { - "system": "http://loinc.org", - "code": "LA26398-0", - "display": "Sequencing" - } - ] - }, - "specimen": { - "reference": "Specimen/specimen-example-1", - "display": "Specimen" - }, - "component": [ - { - "code": { - "coding": [ - { - "system": "http://loinc.org", - "code": "48018-6", - "display": "Gene studied ID" - } - ] - }, - "valueCodeableConcept": { - "coding": [ - { - "system": "https://www.ncbi.nlm.nih.gov/gene", - "code": "LBR", - "display": "HGNC:6518" - } - ] - } - }, - { - "code": { - "coding": [ - { - "system": "http://loinc.org", - "code": "48001-2", - "display": "Cytogenetic (chromosome) location" - } - ] - }, - "valueCodeableConcept": { - "coding": [ - { - "system": "http://fhir.ncpi-project-forge.io/ValueSet/loinc-answers", - "code": "LA21254-0", - "display": "Chr1" - } - ], - "text": "Chr1" - } - }, - { - "code": { - "coding": [ - { - "system": "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes", - "code": "exact-start-end", - "display": "Variant exact start and end" - } - ] - }, - "valueRange": { - "low": { - "value": 225592153 - } - } - }, - { - "code": { - "coding": [ - { - "system": "http://loinc.org", - "code": "69547-8", - "display": "Genomic ref allele [ID]" - } - ] - }, - "valueString": "T" - }, - { - "code": { - "coding": [ - { - "system": "http://loinc.org", - "code": "69551-0", - "display": "Genomic alt allele [ID]" - } - ] - }, - "valueString": "C" - }, - { - "code": { - "coding": [ - { - "system": "http://loinc.org", - "code": "53034-5", - "display": "Allelic state" - } - ] - }, - "valueCodeableConcept": { - "coding": [ - { - "system": "http://loinc.org", - "code": "LA6706-1", - "display": "Heterozygous" - } - ], - "text": "Heterozygous" - } - }, - { - "code": { - "coding": [ - { - "system": "http://loinc.org", - "code": "62374-4", - "display": "Human reference sequence assembly version" - } - ] - }, - "valueCodeableConcept": { - "coding": [ - { - "system": "http://loinc.org", - "code": "LA14029-5", - "display": "GRCh37" - } - ], - "text": "GRCh37" - } - }, - { - "code": { - "coding": [ - { - "system": "http://loinc.org", - "code": "51958-7", - "display": "Transcript reference sequence [ID]" - } - ] - }, - "valueCodeableConcept": { - "coding": [ - { - "system": "http://www.ncbi.nlm.nih.gov/refseq", - "code": "NM_002296.3", - "display": "NM_002296.3" - } - ] - } - }, - { - "code": { - "coding": [ - { - "system": "http://loinc.org", - "code": "48004-6", - "display": "DNA change (c.HGVS)" - } - ] - }, - "valueCodeableConcept": { - "coding": [ - { - "system": "http://varnomen.hgvs.org", - "code": "c.1640A>G", - "display": "c.1640A>G" - } - ] - } - } - ] +{ + "resourceType" : "Observation", + "id" : "variant-example-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"variant-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "variant-example-1" </p></div><p><b>status</b>: final</p><p><b>category</b>: Laboratory <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-observation-category.html\">Observation Category Codes</a>#laboratory)</span></p><p><b>code</b>: Genetic variant assessment <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#69548-6)</span></p><p><b>value</b>: Present <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA9633-4)</span></p><p><b>method</b>: Sequencing <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA26398-0)</span></p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-1.html\">Specimen/specimen-example-1: Specimen</a></p><blockquote><p><b>component</b></p><p><b>code</b>: Gene studied ID <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#48018-6)</span></p><p><b>value</b>: HGNC:6518 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (gene#LBR)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Cytogenetic (chromosome) location <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#48001-2)</span></p><p><b>value</b>: Chr1 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (loinc-answers#LA21254-0)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Variant exact start and end <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-tbd-codes.html\">ToBeDeterminedCodes ('TbdCodes')</a>#exact-start-end)</span></p><p><b>value</b>: 225592153-?</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Genomic ref allele [ID] <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#69547-8)</span></p><p><b>value</b>: T</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Genomic alt allele [ID] <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#69551-0)</span></p><p><b>value</b>: C</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Allelic state <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#53034-5)</span></p><p><b>value</b>: Heterozygous <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA6706-1)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Human reference sequence assembly version <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#62374-4)</span></p><p><b>value</b>: GRCh37 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA14029-5)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Transcript reference sequence [ID] <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#51958-7)</span></p><p><b>value</b>: NM_002296.3 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-refSeq.html\">Gene Reference Sequence Collection</a>#NM_002296.3)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: DNA change (c.HGVS) <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#48004-6)</span></p><p><b>value</b>: c.1640A>G <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-hgvs.html\">Human Genome Variation Society nomenclature</a>#c.1640A>G)</span></p></blockquote></div>" + }, + "status" : "final", + "category" : [{ + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/observation-category", + "code" : "laboratory" + }] + }], + "code" : { + "coding" : [{ + "system" : "http://loinc.org", + "code" : "69548-6", + "display" : "Genetic variant assessment" + }] + }, + "valueCodeableConcept" : { + "coding" : [{ + "system" : "http://loinc.org", + "code" : "LA9633-4", + "display" : "Present" + }] + }, + "method" : { + "coding" : [{ + "system" : "http://loinc.org", + "code" : "LA26398-0", + "display" : "Sequencing" + }] + }, + "specimen" : { + "reference" : "Specimen/specimen-example-1", + "display" : "Specimen" + }, + "component" : [{ + "code" : { + "coding" : [{ + "system" : "http://loinc.org", + "code" : "48018-6", + "display" : "Gene studied ID" + }] + }, + "valueCodeableConcept" : { + "coding" : [{ + "system" : "https://www.ncbi.nlm.nih.gov/gene", + "code" : "LBR", + "display" : "HGNC:6518" + }] + } + }, + { + "code" : { + "coding" : [{ + "system" : "http://loinc.org", + "code" : "48001-2", + "display" : "Cytogenetic (chromosome) location" + }] + }, + "valueCodeableConcept" : { + "coding" : [{ + "system" : "http://fhir.ncpi-project-forge.io/ValueSet/loinc-answers", + "code" : "LA21254-0", + "display" : "Chr1" + }], + "text" : "Chr1" + } + }, + { + "code" : { + "coding" : [{ + "system" : "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes", + "code" : "exact-start-end", + "display" : "Variant exact start and end" + }] + }, + "valueRange" : { + "low" : { + "value" : 225592153 + } + } + }, + { + "code" : { + "coding" : [{ + "system" : "http://loinc.org", + "code" : "69547-8", + "display" : "Genomic ref allele [ID]" + }] + }, + "valueString" : "T" + }, + { + "code" : { + "coding" : [{ + "system" : "http://loinc.org", + "code" : "69551-0", + "display" : "Genomic alt allele [ID]" + }] + }, + "valueString" : "C" + }, + { + "code" : { + "coding" : [{ + "system" : "http://loinc.org", + "code" : "53034-5", + "display" : "Allelic state" + }] + }, + "valueCodeableConcept" : { + "coding" : [{ + "system" : "http://loinc.org", + "code" : "LA6706-1", + "display" : "Heterozygous" + }], + "text" : "Heterozygous" + } + }, + { + "code" : { + "coding" : [{ + "system" : "http://loinc.org", + "code" : "62374-4", + "display" : "Human reference sequence assembly version" + }] + }, + "valueCodeableConcept" : { + "coding" : [{ + "system" : "http://loinc.org", + "code" : "LA14029-5", + "display" : "GRCh37" + }], + "text" : "GRCh37" + } + }, + { + "code" : { + "coding" : [{ + "system" : "http://loinc.org", + "code" : "51958-7", + "display" : "Transcript reference sequence [ID]" + }] + }, + "valueCodeableConcept" : { + "coding" : [{ + "system" : "http://www.ncbi.nlm.nih.gov/refseq", + "code" : "NM_002296.3", + "display" : "NM_002296.3" + }] + } + }, + { + "code" : { + "coding" : [{ + "system" : "http://loinc.org", + "code" : "48004-6", + "display" : "DNA change (c.HGVS)" + }] + }, + "valueCodeableConcept" : { + "coding" : [{ + "system" : "http://varnomen.hgvs.org", + "code" : "c.1640A>G", + "display" : "c.1640A>G" + }] + } + }] } \ No newline at end of file diff --git a/Observation-variant-example-1.json.html b/Observation-variant-example-1.json.html index b7c99209..1e15c723 100644 --- a/Observation-variant-example-1.json.html +++ b/Observation-variant-example-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -527,7 +527,7 @@ <h2 id="root">: variant-example-1 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-variant-example-1.ttl b/Observation-variant-example-1.ttl index bcf168af..537a83e3 100644 --- a/Observation-variant-example-1.ttl +++ b/Observation-variant-example-1.ttl @@ -8,12 +8,12 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Observation/variant-example-1> a fhir:Observation; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "variant-example-1"]; + fhir:Resource.id [ fhir:value "variant-example-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"variant-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "variant-example-1" </p></div><p><b>status</b>: final</p><p><b>category</b>: Laboratory <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-observation-category.html\">Observation Category Codes</a>#laboratory)</span></p><p><b>code</b>: Genetic variant assessment <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#69548-6)</span></p><p><b>value</b>: Present <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA9633-4)</span></p><p><b>method</b>: Sequencing <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA26398-0)</span></p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-1.html\">Specimen/specimen-example-1: Specimen</a></p><blockquote><p><b>component</b></p><p><b>code</b>: Gene studied ID <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#48018-6)</span></p><p><b>value</b>: HGNC:6518 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (gene#LBR)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Cytogenetic (chromosome) location <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#48001-2)</span></p><p><b>value</b>: Chr1 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (loinc-answers#LA21254-0)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Variant exact start and end <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-tbd-codes.html\">ToBeDeterminedCodes ('TbdCodes')</a>#exact-start-end)</span></p><p><b>value</b>: 225592153-?</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Genomic ref allele [ID] <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#69547-8)</span></p><p><b>value</b>: T</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Genomic alt allele [ID] <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#69551-0)</span></p><p><b>value</b>: C</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Allelic state <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#53034-5)</span></p><p><b>value</b>: Heterozygous <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA6706-1)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Human reference sequence assembly version <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#62374-4)</span></p><p><b>value</b>: GRCh37 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA14029-5)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Transcript reference sequence [ID] <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#51958-7)</span></p><p><b>value</b>: NM_002296.3 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-refSeq.html\">Gene Reference Sequence Collection</a>#NM_002296.3)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: DNA change (c.HGVS) <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#48004-6)</span></p><p><b>value</b>: c.1640A>G <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-hgvs.html\">Human Genome Variation Society nomenclature</a>#c.1640A>G)</span></p></blockquote></div>" - ]; - fhir:Observation.status [ fhir:value "final"]; + ]; # + fhir:Observation.status [ fhir:value "final"]; # fhir:Observation.category [ fhir:index 0; fhir:CodeableConcept.coding [ @@ -21,7 +21,7 @@ fhir:Coding.system [ fhir:value "http://terminology.hl7.org/CodeSystem/observation-category" ]; fhir:Coding.code [ fhir:value "laboratory" ] ] - ]; + ]; # fhir:Observation.code [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -30,7 +30,7 @@ fhir:Coding.code [ fhir:value "69548-6" ]; fhir:Coding.display [ fhir:value "Genetic variant assessment" ] ] - ]; + ]; # fhir:Observation.valueCodeableConcept [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -39,7 +39,7 @@ fhir:Coding.code [ fhir:value "LA9633-4" ]; fhir:Coding.display [ fhir:value "Present" ] ] - ]; + ]; # fhir:Observation.method [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -48,12 +48,12 @@ fhir:Coding.code [ fhir:value "LA26398-0" ]; fhir:Coding.display [ fhir:value "Sequencing" ] ] - ]; + ]; # fhir:Observation.specimen [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Specimen/specimen-example-1>; fhir:Reference.reference [ fhir:value "Specimen/specimen-example-1" ]; fhir:Reference.display [ fhir:value "Specimen" ] - ]; + ]; # fhir:Observation.component [ fhir:index 0; fhir:Observation.component.code [ @@ -212,7 +212,7 @@ fhir:Coding.display [ fhir:value "c.1640A>G" ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Observation-variant-example-1.ttl.html b/Observation-variant-example-1.ttl.html index 977a1bda..6967eaf7 100644 --- a/Observation-variant-example-1.ttl.html +++ b/Observation-variant-example-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -293,19 +293,19 @@ <h2 id="root">: variant-example-1 - TTL Representation</h2> a fhir:Observation; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "variant-example-1"]; + <a href="http://hl7.org/fhir/R4/observation.html#Observation.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "variant-example-1"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"variant-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation &quot;variant-example-1&quot; </p></div><p><b>status</b>: final</p><p><b>category</b>: Laboratory <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-observation-category.html\">Observation Category Codes</a>#laboratory)</span></p><p><b>code</b>: Genetic variant assessment <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#69548-6)</span></p><p><b>value</b>: Present <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA9633-4)</span></p><p><b>method</b>: Sequencing <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA26398-0)</span></p><p><b>specimen</b>: <a href=\"Specimen-specimen-example-1.html\">Specimen/specimen-example-1: Specimen</a></p><blockquote><p><b>component</b></p><p><b>code</b>: Gene studied ID <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#48018-6)</span></p><p><b>value</b>: HGNC:6518 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (gene#LBR)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Cytogenetic (chromosome) location <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#48001-2)</span></p><p><b>value</b>: Chr1 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (loinc-answers#LA21254-0)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Variant exact start and end <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-tbd-codes.html\">ToBeDeterminedCodes ('TbdCodes')</a>#exact-start-end)</span></p><p><b>value</b>: 225592153-?</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Genomic ref allele [ID] <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#69547-8)</span></p><p><b>value</b>: T</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Genomic alt allele [ID] <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#69551-0)</span></p><p><b>value</b>: C</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Allelic state <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#53034-5)</span></p><p><b>value</b>: Heterozygous <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA6706-1)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Human reference sequence assembly version <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#62374-4)</span></p><p><b>value</b>: GRCh37 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA14029-5)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Transcript reference sequence [ID] <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#51958-7)</span></p><p><b>value</b>: NM_002296.3 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-refSeq.html\">Gene Reference Sequence Collection</a>#NM_002296.3)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: DNA change (c.HGVS) <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#48004-6)</span></p><p><b>value</b>: c.1640A&gt;G <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v3-hgvs.html\">Human Genome Variation Society nomenclature</a>#c.1640A&gt;G)</span></p></blockquote></div>" - ]; - <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; + ]; # + <a href="http://hl7.org/fhir/R4/observation.html#Observation.status">fhir:Observation.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "final"]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.category">fhir:Observation.category</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://terminology.hl7.org/CodeSystem/observation-category" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "laboratory" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.code">fhir:Observation.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -313,7 +313,7 @@ <h2 id="root">: variant-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://loinc.org" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "69548-6" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Genetic variant assessment" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.value[x]">fhir:Observation.valueCodeableConcept</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -321,7 +321,7 @@ <h2 id="root">: variant-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://loinc.org" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "LA9633-4" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Present" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.method">fhir:Observation.method</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -329,11 +329,11 @@ <h2 id="root">: variant-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://loinc.org" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "LA26398-0" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Sequencing" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.specimen">fhir:Observation.specimen</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Specimen/specimen-example-1" ]; <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.display">fhir:Reference.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Specimen" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observation.html#Observation.component">fhir:Observation.component</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/observation.html#Observation.component.code">fhir:Observation.component.code</a> [ @@ -460,7 +460,7 @@ <h2 id="root">: variant-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://varnomen.hgvs.org" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "c.1640A>G" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "c.1640A>G" ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -498,7 +498,7 @@ <h2 id="root">: variant-example-1 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Observation-variant-example-1.xml.html b/Observation-variant-example-1.xml.html index 0bb48b47..d6c58f0d 100644 --- a/Observation-variant-example-1.xml.html +++ b/Observation-variant-example-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -488,7 +488,7 @@ <h2 id="root">: variant-example-1 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-1.change.history.html b/ObservationDefinition-example-study-data-dictionary-variable-1-1.change.history.html index fb1f243c..1ba333ad 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-1.change.history.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ObservationDefinition/example-study-data-dictionary-variable-1-1 <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-1.html b/ObservationDefinition-example-study-data-dictionary-variable-1-1.html index 5a3534ba..7b37848f 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-1.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -324,7 +324,7 @@ <h2 id="root">Example ObservationDefinition: Example Study Data Dictionary Varia <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-1.json b/ObservationDefinition-example-study-data-dictionary-variable-1-1.json index 3b49f190..3d291f6d 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-1.json +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-1.json @@ -1,24 +1,18 @@ -{ - "resourceType": "ObservationDefinition", - "id": "example-study-data-dictionary-variable-1-1", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition "example-study-data-dictionary-variable-1-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Subject's Unique Identifier <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#subjectid)</span></p><p><b>permittedDataType</b>: string</p></div>" - }, - "code": { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "code": "subjectid" - } - ] - }, - "permittedDataType": [ - "string" - ] +{ + "resourceType" : "ObservationDefinition", + "id" : "example-study-data-dictionary-variable-1-1", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition "example-study-data-dictionary-variable-1-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Subject's Unique Identifier <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#subjectid)</span></p><p><b>permittedDataType</b>: string</p></div>" + }, + "code" : { + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "code" : "subjectid" + }] + }, + "permittedDataType" : ["string"] } \ No newline at end of file diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-1.json.html b/ObservationDefinition-example-study-data-dictionary-variable-1-1.json.html index 234fd492..0a916c1e 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-1.json.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -336,7 +336,7 @@ <h2 id="root">: Example Study Data Dictionary Variable subjectid - JSON Represen <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-1.ttl b/ObservationDefinition-example-study-data-dictionary-variable-1-1.ttl index d071431c..79e11aeb 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-1.ttl +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-1.ttl @@ -7,29 +7,29 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ObservationDefinition/example-study-data-dictionary-variable-1-1> a fhir:ObservationDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "example-study-data-dictionary-variable-1-1"]; + fhir:Resource.id [ fhir:value "example-study-data-dictionary-variable-1-1"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition "example-study-data-dictionary-variable-1-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Subject's Unique Identifier <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#subjectid)</span></p><p><b>permittedDataType</b>: string</p></div>" - ]; + ]; # fhir:ObservationDefinition.code [ fhir:CodeableConcept.coding [ fhir:index 0; fhir:Coding.system [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1" ]; fhir:Coding.code [ fhir:value "subjectid" ] ] - ]; + ]; # fhir:ObservationDefinition.permittedDataType [ fhir:value "string"; fhir:index 0 - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-1.ttl.html b/ObservationDefinition-example-study-data-dictionary-variable-1-1.ttl.html index 1cae82c4..a3012b5a 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-1.ttl.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,27 +292,27 @@ <h2 id="root">: Example Study Data Dictionary Variable subjectid - TTL Represent a fhir:ObservationDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "example-study-data-dictionary-variable-1-1"]; + <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "example-study-data-dictionary-variable-1-1"]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition &quot;example-study-data-dictionary-variable-1-1&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Subject's Unique Identifier <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#subjectid)</span></p><p><b>permittedDataType</b>: string</p></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.code">fhir:ObservationDefinition.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "subjectid" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.permittedDataType">fhir:ObservationDefinition.permittedDataType</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "string"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0 - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -350,7 +350,7 @@ <h2 id="root">: Example Study Data Dictionary Variable subjectid - TTL Represent <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-1.xml.html b/ObservationDefinition-example-study-data-dictionary-variable-1-1.xml.html index cd187c47..b83cfe4c 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-1.xml.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -332,7 +332,7 @@ <h2 id="root">: Example Study Data Dictionary Variable subjectid - XML Represent <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-2.change.history.html b/ObservationDefinition-example-study-data-dictionary-variable-1-2.change.history.html index b4ef5136..aed50987 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-2.change.history.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-2.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ObservationDefinition/example-study-data-dictionary-variable-1-2 <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-2.html b/ObservationDefinition-example-study-data-dictionary-variable-1-2.html index 6b0c09d1..c748e6b1 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-2.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-2.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -324,7 +324,7 @@ <h2 id="root">Example ObservationDefinition: Example Study Data Dictionary Varia <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-2.json b/ObservationDefinition-example-study-data-dictionary-variable-1-2.json index 29bf979f..a3f8fb07 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-2.json +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-2.json @@ -1,27 +1,21 @@ -{ - "resourceType": "ObservationDefinition", - "id": "example-study-data-dictionary-variable-1-2", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-2\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition "example-study-data-dictionary-variable-1-2" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Gender <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#gender)</span></p><p><b>permittedDataType</b>: CodeableConcept</p><p><b>validCodedValueSet</b>: <a href=\"http://hl7.org/fhir/ValueSet/administrative-gender\">http://hl7.org/fhir/ValueSet/administrative-gender</a> "AdministrativeGender"</p></div>" - }, - "code": { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "code": "gender" - } - ] - }, - "permittedDataType": [ - "CodeableConcept" - ], - "validCodedValueSet": { - "reference": "http://hl7.org/fhir/ValueSet/administrative-gender" - } +{ + "resourceType" : "ObservationDefinition", + "id" : "example-study-data-dictionary-variable-1-2", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-2\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition "example-study-data-dictionary-variable-1-2" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Gender <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#gender)</span></p><p><b>permittedDataType</b>: CodeableConcept</p><p><b>validCodedValueSet</b>: <a href=\"http://hl7.org/fhir/ValueSet/administrative-gender\">http://hl7.org/fhir/ValueSet/administrative-gender</a> "AdministrativeGender"</p></div>" + }, + "code" : { + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "code" : "gender" + }] + }, + "permittedDataType" : ["CodeableConcept"], + "validCodedValueSet" : { + "reference" : "http://hl7.org/fhir/ValueSet/administrative-gender" + } } \ No newline at end of file diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-2.json.html b/ObservationDefinition-example-study-data-dictionary-variable-1-2.json.html index 9ae6fc79..11eb1f6d 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-2.json.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-2.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -339,7 +339,7 @@ <h2 id="root">: Example Study Data Dictionary Variable gender - JSON Representat <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-2.ttl b/ObservationDefinition-example-study-data-dictionary-variable-1-2.ttl index 58494349..fa97c27a 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-2.ttl +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-2.ttl @@ -7,33 +7,33 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ObservationDefinition/example-study-data-dictionary-variable-1-2> a fhir:ObservationDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "example-study-data-dictionary-variable-1-2"]; + fhir:Resource.id [ fhir:value "example-study-data-dictionary-variable-1-2"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-2\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition "example-study-data-dictionary-variable-1-2" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Gender <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#gender)</span></p><p><b>permittedDataType</b>: CodeableConcept</p><p><b>validCodedValueSet</b>: <a href=\"http://hl7.org/fhir/ValueSet/administrative-gender\">http://hl7.org/fhir/ValueSet/administrative-gender</a> "AdministrativeGender"</p></div>" - ]; + ]; # fhir:ObservationDefinition.code [ fhir:CodeableConcept.coding [ fhir:index 0; fhir:Coding.system [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1" ]; fhir:Coding.code [ fhir:value "gender" ] ] - ]; + ]; # fhir:ObservationDefinition.permittedDataType [ fhir:value "CodeableConcept"; fhir:index 0 - ]; + ]; # fhir:ObservationDefinition.validCodedValueSet [ fhir:link <http://hl7.org/fhir/ValueSet/administrative-gender>; fhir:Reference.reference [ fhir:value "http://hl7.org/fhir/ValueSet/administrative-gender" ] - ] . + ] . # <http://hl7.org/fhir/ValueSet/administrative-gender> a fhir:ValueSet . diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-2.ttl.html b/ObservationDefinition-example-study-data-dictionary-variable-1-2.ttl.html index 024e4820..47a99eca 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-2.ttl.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-2.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,31 +292,31 @@ <h2 id="root">: Example Study Data Dictionary Variable gender - TTL Representati a fhir:ObservationDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "example-study-data-dictionary-variable-1-2"]; + <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "example-study-data-dictionary-variable-1-2"]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-2\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition &quot;example-study-data-dictionary-variable-1-2&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Gender <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#gender)</span></p><p><b>permittedDataType</b>: CodeableConcept</p><p><b>validCodedValueSet</b>: <a href=\"http://hl7.org/fhir/ValueSet/administrative-gender\">http://hl7.org/fhir/ValueSet/administrative-gender</a> &quot;AdministrativeGender&quot;</p></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.code">fhir:ObservationDefinition.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "gender" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.permittedDataType">fhir:ObservationDefinition.permittedDataType</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "CodeableConcept"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0 - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.validCodedValueSet">fhir:ObservationDefinition.validCodedValueSet</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/ValueSet/administrative-gender>; <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "http://hl7.org/fhir/ValueSet/administrative-gender" ] - ]. + ]. # <http://hl7.org/fhir/ValueSet/administrative-gender> a fhir:ValueSet. @@ -356,7 +356,7 @@ <h2 id="root">: Example Study Data Dictionary Variable gender - TTL Representati <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-2.xml.html b/ObservationDefinition-example-study-data-dictionary-variable-1-2.xml.html index 9c102b52..f7ef6ac5 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-2.xml.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-2.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -335,7 +335,7 @@ <h2 id="root">: Example Study Data Dictionary Variable gender - XML Representati <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-3.change.history.html b/ObservationDefinition-example-study-data-dictionary-variable-1-3.change.history.html index e02fd98b..d5671114 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-3.change.history.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-3.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ObservationDefinition/example-study-data-dictionary-variable-1-3 <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-3.html b/ObservationDefinition-example-study-data-dictionary-variable-1-3.html index 098d16fb..901f74c9 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-3.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-3.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -324,7 +324,7 @@ <h2 id="root">Example ObservationDefinition: Example Study Data Dictionary Varia <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-3.json b/ObservationDefinition-example-study-data-dictionary-variable-1-3.json index 4e973776..0f03c8ee 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-3.json +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-3.json @@ -1,38 +1,30 @@ -{ - "resourceType": "ObservationDefinition", - "id": "example-study-data-dictionary-variable-1-3", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-3\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition "example-study-data-dictionary-variable-1-3" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Subject's Age at Enrollment in days <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#age_at_enrollment)</span></p><p><b>permittedDataType</b>: integer</p><h3>QualifiedIntervals</h3><table class=\"grid\"><tr><td>-</td><td><b>Age</b></td></tr><tr><td>*</td><td>10957-14610 days</td></tr></table></div>" - }, - "code": { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "code": "age_at_enrollment" - } - ] - }, - "permittedDataType": [ - "integer" - ], - "qualifiedInterval": [ - { - "age": { - "low": { - "value": 10957, - "unit": "days" - }, - "high": { - "value": 14610, - "unit": "days" - } - } - } - ] +{ + "resourceType" : "ObservationDefinition", + "id" : "example-study-data-dictionary-variable-1-3", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-3\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition "example-study-data-dictionary-variable-1-3" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Subject's Age at Enrollment in days <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#age_at_enrollment)</span></p><p><b>permittedDataType</b>: integer</p><h3>QualifiedIntervals</h3><table class=\"grid\"><tr><td>-</td><td><b>Age</b></td></tr><tr><td>*</td><td>10957-14610 days</td></tr></table></div>" + }, + "code" : { + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "code" : "age_at_enrollment" + }] + }, + "permittedDataType" : ["integer"], + "qualifiedInterval" : [{ + "age" : { + "low" : { + "value" : 10957, + "unit" : "days" + }, + "high" : { + "value" : 14610, + "unit" : "days" + } + } + }] } \ No newline at end of file diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-3.json.html b/ObservationDefinition-example-study-data-dictionary-variable-1-3.json.html index db3048c0..d89a1ce6 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-3.json.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-3.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -350,7 +350,7 @@ <h2 id="root">: Example Study Data Dictionary Variable age_at_enrollment - JSON <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-3.ttl b/ObservationDefinition-example-study-data-dictionary-variable-1-3.ttl index 253d7f75..5d20e3c0 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-3.ttl +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-3.ttl @@ -7,29 +7,29 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ObservationDefinition/example-study-data-dictionary-variable-1-3> a fhir:ObservationDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "example-study-data-dictionary-variable-1-3"]; + fhir:Resource.id [ fhir:value "example-study-data-dictionary-variable-1-3"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-3\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition "example-study-data-dictionary-variable-1-3" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Subject's Age at Enrollment in days <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#age_at_enrollment)</span></p><p><b>permittedDataType</b>: integer</p><h3>QualifiedIntervals</h3><table class=\"grid\"><tr><td>-</td><td><b>Age</b></td></tr><tr><td>*</td><td>10957-14610 days</td></tr></table></div>" - ]; + ]; # fhir:ObservationDefinition.code [ fhir:CodeableConcept.coding [ fhir:index 0; fhir:Coding.system [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1" ]; fhir:Coding.code [ fhir:value "age_at_enrollment" ] ] - ]; + ]; # fhir:ObservationDefinition.permittedDataType [ fhir:value "integer"; fhir:index 0 - ]; + ]; # fhir:ObservationDefinition.qualifiedInterval [ fhir:index 0; fhir:ObservationDefinition.qualifiedInterval.age [ @@ -42,7 +42,7 @@ fhir:Quantity.unit [ fhir:value "days" ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-3.ttl.html b/ObservationDefinition-example-study-data-dictionary-variable-1-3.ttl.html index c6fb73bb..8e36cc7e 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-3.ttl.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-3.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,27 +292,27 @@ <h2 id="root">: Example Study Data Dictionary Variable age_at_enrollment - TTL R a fhir:ObservationDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "example-study-data-dictionary-variable-1-3"]; + <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "example-study-data-dictionary-variable-1-3"]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-3\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition &quot;example-study-data-dictionary-variable-1-3&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Subject's Age at Enrollment in days <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#age_at_enrollment)</span></p><p><b>permittedDataType</b>: integer</p><h3>QualifiedIntervals</h3><table class=\"grid\"><tr><td>-</td><td><b>Age</b></td></tr><tr><td>*</td><td>10957-14610 days</td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.code">fhir:ObservationDefinition.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "age_at_enrollment" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.permittedDataType">fhir:ObservationDefinition.permittedDataType</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "integer"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0 - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.qualifiedInterval">fhir:ObservationDefinition.qualifiedInterval</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.qualifiedInterval.age">fhir:ObservationDefinition.qualifiedInterval.age</a> [ @@ -322,7 +322,7 @@ <h2 id="root">: Example Study Data Dictionary Variable age_at_enrollment - TTL R <a href="http://hl7.org/fhir/R4/datatypes.html#Range#Range.high">fhir:Range.high</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#SimpleQuantity#Quantity.value">fhir:Quantity.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#decimal">fhir:value</a> "14610"^^xsd:decimal ]; <a href="http://hl7.org/fhir/R4/datatypes.html#SimpleQuantity#Quantity.unit">fhir:Quantity.unit</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "days" ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -360,7 +360,7 @@ <h2 id="root">: Example Study Data Dictionary Variable age_at_enrollment - TTL R <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-3.xml.html b/ObservationDefinition-example-study-data-dictionary-variable-1-3.xml.html index dc1f5870..a9a31c1e 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-3.xml.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-3.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -344,7 +344,7 @@ <h2 id="root">: Example Study Data Dictionary Variable age_at_enrollment - XML R <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-4.change.history.html b/ObservationDefinition-example-study-data-dictionary-variable-1-4.change.history.html index cb94c2f0..8ad2fce8 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-4.change.history.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-4.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ObservationDefinition/example-study-data-dictionary-variable-1-4 <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-4.html b/ObservationDefinition-example-study-data-dictionary-variable-1-4.html index 9ac2bf32..4d788bba 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-4.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-4.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -324,7 +324,7 @@ <h2 id="root">Example ObservationDefinition: Example Study Data Dictionary Varia <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-4.json b/ObservationDefinition-example-study-data-dictionary-variable-1-4.json index beec4938..6a0b01b3 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-4.json +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-4.json @@ -1,34 +1,26 @@ -{ - "resourceType": "ObservationDefinition", - "id": "example-study-data-dictionary-variable-1-4", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-4\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition "example-study-data-dictionary-variable-1-4" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Subject's BMI, Measured at Enrollment <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#bmi)</span></p><p><b>permittedDataType</b>: Quantity</p><h3>QuantitativeDetails</h3><table class=\"grid\"><tr><td>-</td><td><b>Unit</b></td></tr><tr><td>*</td><td>kg/m2 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://ucum.org\">UCUM</a>#kg/m2)</span></td></tr></table></div>" - }, - "code": { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "code": "bmi" - } - ] - }, - "permittedDataType": [ - "Quantity" - ], - "quantitativeDetails": { - "unit": { - "coding": [ - { - "system": "http://unitsofmeasure.org", - "code": "kg/m2" - } - ] - } - } +{ + "resourceType" : "ObservationDefinition", + "id" : "example-study-data-dictionary-variable-1-4", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-4\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition "example-study-data-dictionary-variable-1-4" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Subject's BMI, Measured at Enrollment <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#bmi)</span></p><p><b>permittedDataType</b>: Quantity</p><h3>QuantitativeDetails</h3><table class=\"grid\"><tr><td>-</td><td><b>Unit</b></td></tr><tr><td>*</td><td>kg/m2 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://ucum.org\">UCUM</a>#kg/m2)</span></td></tr></table></div>" + }, + "code" : { + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "code" : "bmi" + }] + }, + "permittedDataType" : ["Quantity"], + "quantitativeDetails" : { + "unit" : { + "coding" : [{ + "system" : "http://unitsofmeasure.org", + "code" : "kg/m2" + }] + } + } } \ No newline at end of file diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-4.json.html b/ObservationDefinition-example-study-data-dictionary-variable-1-4.json.html index 9603b296..a01c017f 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-4.json.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-4.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -346,7 +346,7 @@ <h2 id="root">: Example Study Data Dictionary Variable bmi - JSON Representation <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-4.ttl b/ObservationDefinition-example-study-data-dictionary-variable-1-4.ttl index 5ab038f2..27e8836f 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-4.ttl +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-4.ttl @@ -7,29 +7,29 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ObservationDefinition/example-study-data-dictionary-variable-1-4> a fhir:ObservationDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "example-study-data-dictionary-variable-1-4"]; + fhir:Resource.id [ fhir:value "example-study-data-dictionary-variable-1-4"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-4\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition "example-study-data-dictionary-variable-1-4" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Subject's BMI, Measured at Enrollment <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#bmi)</span></p><p><b>permittedDataType</b>: Quantity</p><h3>QuantitativeDetails</h3><table class=\"grid\"><tr><td>-</td><td><b>Unit</b></td></tr><tr><td>*</td><td>kg/m2 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://ucum.org\">UCUM</a>#kg/m2)</span></td></tr></table></div>" - ]; + ]; # fhir:ObservationDefinition.code [ fhir:CodeableConcept.coding [ fhir:index 0; fhir:Coding.system [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1" ]; fhir:Coding.code [ fhir:value "bmi" ] ] - ]; + ]; # fhir:ObservationDefinition.permittedDataType [ fhir:value "Quantity"; fhir:index 0 - ]; + ]; # fhir:ObservationDefinition.quantitativeDetails [ fhir:ObservationDefinition.quantitativeDetails.unit [ fhir:CodeableConcept.coding [ @@ -38,7 +38,7 @@ fhir:Coding.code [ fhir:value "kg/m2" ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-4.ttl.html b/ObservationDefinition-example-study-data-dictionary-variable-1-4.ttl.html index 55e7cc76..b8d369a4 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-4.ttl.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-4.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,34 +292,34 @@ <h2 id="root">: Example Study Data Dictionary Variable bmi - TTL Representation< a fhir:ObservationDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "example-study-data-dictionary-variable-1-4"]; + <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "example-study-data-dictionary-variable-1-4"]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-4\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition &quot;example-study-data-dictionary-variable-1-4&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Subject's BMI, Measured at Enrollment <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#bmi)</span></p><p><b>permittedDataType</b>: Quantity</p><h3>QuantitativeDetails</h3><table class=\"grid\"><tr><td>-</td><td><b>Unit</b></td></tr><tr><td>*</td><td>kg/m2 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://ucum.org\">UCUM</a>#kg/m2)</span></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.code">fhir:ObservationDefinition.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "bmi" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.permittedDataType">fhir:ObservationDefinition.permittedDataType</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "Quantity"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0 - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.quantitativeDetails">fhir:ObservationDefinition.quantitativeDetails</a> [ <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.quantitativeDetails.unit">fhir:ObservationDefinition.quantitativeDetails.unit</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://unitsofmeasure.org" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "kg/m2" ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -357,7 +357,7 @@ <h2 id="root">: Example Study Data Dictionary Variable bmi - TTL Representation< <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-4.xml.html b/ObservationDefinition-example-study-data-dictionary-variable-1-4.xml.html index 707db0c3..51db5a26 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-4.xml.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-4.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -340,7 +340,7 @@ <h2 id="root">: Example Study Data Dictionary Variable bmi - XML Representation< <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-5.change.history.html b/ObservationDefinition-example-study-data-dictionary-variable-1-5.change.history.html index 77201170..555173e4 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-5.change.history.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-5.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ObservationDefinition/example-study-data-dictionary-variable-1-5 <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-5.html b/ObservationDefinition-example-study-data-dictionary-variable-1-5.html index ea4152a7..635494f1 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-5.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-5.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -324,7 +324,7 @@ <h2 id="root">Example ObservationDefinition: Data Dictionary Variable status</h2 <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-5.json b/ObservationDefinition-example-study-data-dictionary-variable-1-5.json index 8bce38dc..a8e80577 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-5.json +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-5.json @@ -1,27 +1,21 @@ -{ - "resourceType": "ObservationDefinition", - "id": "example-study-data-dictionary-variable-1-5", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-5\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition "example-study-data-dictionary-variable-1-5" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Subject's status (Case or Control) <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#status)</span></p><p><b>permittedDataType</b>: CodeableConcept</p><p><b>validCodedValueSet</b>: <a href=\"ValueSet-example-study-data-dictionary-case-control-vs-1.html\">ValueSet/example-study-data-dictionary-case-control-vs-1</a> "ExampleStudyDataDictionaryCaseControlVS1"</p></div>" - }, - "code": { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "code": "status" - } - ] - }, - "permittedDataType": [ - "CodeableConcept" - ], - "validCodedValueSet": { - "reference": "ValueSet/example-study-data-dictionary-case-control-vs-1" - } +{ + "resourceType" : "ObservationDefinition", + "id" : "example-study-data-dictionary-variable-1-5", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-5\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition "example-study-data-dictionary-variable-1-5" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Subject's status (Case or Control) <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#status)</span></p><p><b>permittedDataType</b>: CodeableConcept</p><p><b>validCodedValueSet</b>: <a href=\"ValueSet-example-study-data-dictionary-case-control-vs-1.html\">ValueSet/example-study-data-dictionary-case-control-vs-1</a> "ExampleStudyDataDictionaryCaseControlVS1"</p></div>" + }, + "code" : { + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "code" : "status" + }] + }, + "permittedDataType" : ["CodeableConcept"], + "validCodedValueSet" : { + "reference" : "ValueSet/example-study-data-dictionary-case-control-vs-1" + } } \ No newline at end of file diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-5.json.html b/ObservationDefinition-example-study-data-dictionary-variable-1-5.json.html index 60dfa2cc..2de235c7 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-5.json.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-5.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -339,7 +339,7 @@ <h2 id="root">: Data Dictionary Variable status - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-5.ttl b/ObservationDefinition-example-study-data-dictionary-variable-1-5.ttl index 6ec2b2e3..73306c89 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-5.ttl +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-5.ttl @@ -7,33 +7,33 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ObservationDefinition/example-study-data-dictionary-variable-1-5> a fhir:ObservationDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "example-study-data-dictionary-variable-1-5"]; + fhir:Resource.id [ fhir:value "example-study-data-dictionary-variable-1-5"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-5\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition "example-study-data-dictionary-variable-1-5" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Subject's status (Case or Control) <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#status)</span></p><p><b>permittedDataType</b>: CodeableConcept</p><p><b>validCodedValueSet</b>: <a href=\"ValueSet-example-study-data-dictionary-case-control-vs-1.html\">ValueSet/example-study-data-dictionary-case-control-vs-1</a> "ExampleStudyDataDictionaryCaseControlVS1"</p></div>" - ]; + ]; # fhir:ObservationDefinition.code [ fhir:CodeableConcept.coding [ fhir:index 0; fhir:Coding.system [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1" ]; fhir:Coding.code [ fhir:value "status" ] ] - ]; + ]; # fhir:ObservationDefinition.permittedDataType [ fhir:value "CodeableConcept"; fhir:index 0 - ]; + ]; # fhir:ObservationDefinition.validCodedValueSet [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1>; fhir:Reference.reference [ fhir:value "ValueSet/example-study-data-dictionary-case-control-vs-1" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-5.ttl.html b/ObservationDefinition-example-study-data-dictionary-variable-1-5.ttl.html index a10853df..28231103 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-5.ttl.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-5.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,30 +292,30 @@ <h2 id="root">: Data Dictionary Variable status - TTL Representation</h2> a fhir:ObservationDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "example-study-data-dictionary-variable-1-5"]; + <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "example-study-data-dictionary-variable-1-5"]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ObservationDefinition</b><a name=\"example-study-data-dictionary-variable-1-5\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ObservationDefinition &quot;example-study-data-dictionary-variable-1-5&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-study-data-dictionary-variable.html\">NCPI Study Data Dictionary Data Variable</a></p></div><p><b>code</b>: Subject's status (Case or Control) <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables)</a>#status)</span></p><p><b>permittedDataType</b>: CodeableConcept</p><p><b>validCodedValueSet</b>: <a href=\"ValueSet-example-study-data-dictionary-case-control-vs-1.html\">ValueSet/example-study-data-dictionary-case-control-vs-1</a> &quot;ExampleStudyDataDictionaryCaseControlVS1&quot;</p></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.code">fhir:ObservationDefinition.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "status" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.permittedDataType">fhir:ObservationDefinition.permittedDataType</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "CodeableConcept"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0 - ]; + ]; # <a href="http://hl7.org/fhir/R4/observationdefinition.html#ObservationDefinition.validCodedValueSet">fhir:ObservationDefinition.validCodedValueSet</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ValueSet/example-study-data-dictionary-case-control-vs-1" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -353,7 +353,7 @@ <h2 id="root">: Data Dictionary Variable status - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ObservationDefinition-example-study-data-dictionary-variable-1-5.xml.html b/ObservationDefinition-example-study-data-dictionary-variable-1-5.xml.html index 861533cb..6709ab2f 100644 --- a/ObservationDefinition-example-study-data-dictionary-variable-1-5.xml.html +++ b/ObservationDefinition-example-study-data-dictionary-variable-1-5.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -336,7 +336,7 @@ <h2 id="root">: Data Dictionary Variable status - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Organization-organization-example-1.change.history.html b/Organization-organization-example-1.change.history.html index 68b53a14..8b74137f 100644 --- a/Organization-organization-example-1.change.history.html +++ b/Organization-organization-example-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Amazing Children's Hospital - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Organization-organization-example-1.html b/Organization-organization-example-1.html index 46a98b4e..bfd6a9a2 100644 --- a/Organization-organization-example-1.html +++ b/Organization-organization-example-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Organization: organization-example-1</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Organization-organization-example-1.json b/Organization-organization-example-1.json index 61c7506a..543d2833 100644 --- a/Organization-organization-example-1.json +++ b/Organization-organization-example-1.json @@ -1,43 +1,33 @@ -{ - "resourceType": "Organization", - "id": "organization-example-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Organization</b><a name=\"organization-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Organization "organization-example-1" </p></div><p><b>active</b>: true</p><p><b>type</b>: Hospital <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-organization-type.html\">Organization type</a>#prov "Healthcare Provider")</span></p><p><b>name</b>: Amazing Children's Hospital</p><p><b>telecom</b>: ph: (555) 555-5555(WORK)</p><p><b>address</b>: 3401 Civic Center Blvd., Philadelphia, PA 19104(WORK)</p></div>" - }, - "active": true, - "type": [ - { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/organization-type", - "code": "prov", - "display": "Healthcare Provider" - } - ], - "text": "Hospital" - } - ], - "name": "Amazing Children's Hospital", - "telecom": [ - { - "system": "phone", - "value": "(555) 555-5555", - "use": "work", - "rank": 1 - } - ], - "address": [ - { - "use": "work", - "type": "both", - "text": "3401 Civic Center Blvd., Philadelphia, PA 19104", - "line": [ - "3401 Civic Center Blvd." - ], - "city": "Philadelphia", - "state": "PA", - "postalCode": "19104" - } - ] +{ + "resourceType" : "Organization", + "id" : "organization-example-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Organization</b><a name=\"organization-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Organization "organization-example-1" </p></div><p><b>active</b>: true</p><p><b>type</b>: Hospital <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-organization-type.html\">Organization type</a>#prov "Healthcare Provider")</span></p><p><b>name</b>: Amazing Children's Hospital</p><p><b>telecom</b>: ph: (555) 555-5555(WORK)</p><p><b>address</b>: 3401 Civic Center Blvd., Philadelphia, PA 19104(WORK)</p></div>" + }, + "active" : true, + "type" : [{ + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/organization-type", + "code" : "prov", + "display" : "Healthcare Provider" + }], + "text" : "Hospital" + }], + "name" : "Amazing Children's Hospital", + "telecom" : [{ + "system" : "phone", + "value" : "(555) 555-5555", + "use" : "work", + "rank" : 1 + }], + "address" : [{ + "use" : "work", + "type" : "both", + "text" : "3401 Civic Center Blvd., Philadelphia, PA 19104", + "line" : ["3401 Civic Center Blvd."], + "city" : "Philadelphia", + "state" : "PA", + "postalCode" : "19104" + }] } \ No newline at end of file diff --git a/Organization-organization-example-1.json.html b/Organization-organization-example-1.json.html index c1cf76c1..3cd8d428 100644 --- a/Organization-organization-example-1.json.html +++ b/Organization-organization-example-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -355,7 +355,7 @@ <h2 id="root">: organization-example-1 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Organization-organization-example-1.ttl b/Organization-organization-example-1.ttl index c2de7c0e..302c0dd7 100644 --- a/Organization-organization-example-1.ttl +++ b/Organization-organization-example-1.ttl @@ -7,12 +7,12 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Organization/organization-example-1> a fhir:Organization; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "organization-example-1"]; + fhir:Resource.id [ fhir:value "organization-example-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Organization</b><a name=\"organization-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Organization "organization-example-1" </p></div><p><b>active</b>: true</p><p><b>type</b>: Hospital <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-organization-type.html\">Organization type</a>#prov "Healthcare Provider")</span></p><p><b>name</b>: Amazing Children's Hospital</p><p><b>telecom</b>: ph: (555) 555-5555(WORK)</p><p><b>address</b>: 3401 Civic Center Blvd., Philadelphia, PA 19104(WORK)</p></div>" - ]; - fhir:Organization.active [ fhir:value "true"^^xsd:boolean]; + ]; # + fhir:Organization.active [ fhir:value "true"^^xsd:boolean]; # fhir:Organization.type [ fhir:index 0; fhir:CodeableConcept.coding [ @@ -22,15 +22,15 @@ fhir:Coding.display [ fhir:value "Healthcare Provider" ] ]; fhir:CodeableConcept.text [ fhir:value "Hospital" ] - ]; - fhir:Organization.name [ fhir:value "Amazing Children's Hospital"]; + ]; # + fhir:Organization.name [ fhir:value "Amazing Children's Hospital"]; # fhir:Organization.telecom [ fhir:index 0; fhir:ContactPoint.system [ fhir:value "phone" ]; fhir:ContactPoint.value [ fhir:value "(555) 555-5555" ]; fhir:ContactPoint.use [ fhir:value "work" ]; fhir:ContactPoint.rank [ fhir:value "1"^^xsd:positiveInteger ] - ]; + ]; # fhir:Organization.address [ fhir:index 0; fhir:Address.use [ fhir:value "work" ]; @@ -43,7 +43,7 @@ fhir:Address.city [ fhir:value "Philadelphia" ]; fhir:Address.state [ fhir:value "PA" ]; fhir:Address.postalCode [ fhir:value "19104" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Organization-organization-example-1.ttl.html b/Organization-organization-example-1.ttl.html index 95f6040b..e33ded1b 100644 --- a/Organization-organization-example-1.ttl.html +++ b/Organization-organization-example-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,12 +292,12 @@ <h2 id="root">: organization-example-1 - TTL Representation</h2> a fhir:Organization; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/organization.html#Organization.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "organization-example-1"]; + <a href="http://hl7.org/fhir/R4/organization.html#Organization.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "organization-example-1"]; # <a href="http://hl7.org/fhir/R4/organization.html#Organization.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Organization</b><a name=\"organization-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Organization &quot;organization-example-1&quot; </p></div><p><b>active</b>: true</p><p><b>type</b>: Hospital <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-organization-type.html\">Organization type</a>#prov &quot;Healthcare Provider&quot;)</span></p><p><b>name</b>: Amazing Children's Hospital</p><p><b>telecom</b>: ph: (555) 555-5555(WORK)</p><p><b>address</b>: 3401 Civic Center Blvd., Philadelphia, PA 19104(WORK)</p></div>" - ]; - <a href="http://hl7.org/fhir/R4/organization.html#Organization.active">fhir:Organization.active</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; + ]; # + <a href="http://hl7.org/fhir/R4/organization.html#Organization.active">fhir:Organization.active</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; # <a href="http://hl7.org/fhir/R4/organization.html#Organization.type">fhir:Organization.type</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ @@ -306,15 +306,15 @@ <h2 id="root">: organization-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "prov" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Healthcare Provider" ] ]; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.text">fhir:CodeableConcept.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Hospital" ] - ]; - <a href="http://hl7.org/fhir/R4/organization.html#Organization.name">fhir:Organization.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Amazing Children's Hospital"]; + ]; # + <a href="http://hl7.org/fhir/R4/organization.html#Organization.name">fhir:Organization.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Amazing Children's Hospital"]; # <a href="http://hl7.org/fhir/R4/organization.html#Organization.telecom">fhir:Organization.telecom</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "phone" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "(555) 555-5555" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.rank">fhir:ContactPoint.rank</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#positiveInt">fhir:value</a> "1"^^xsd:positiveInteger ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/organization.html#Organization.address">fhir:Organization.address</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.use">fhir:Address.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ]; @@ -326,7 +326,7 @@ <h2 id="root">: organization-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.city">fhir:Address.city</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Philadelphia" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.state">fhir:Address.state</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "PA" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.postalCode">fhir:Address.postalCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "19104" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -364,7 +364,7 @@ <h2 id="root">: organization-example-1 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Organization-organization-example-1.xml.html b/Organization-organization-example-1.xml.html index bff81825..449c5589 100644 --- a/Organization-organization-example-1.xml.html +++ b/Organization-organization-example-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -346,7 +346,7 @@ <h2 id="root">: organization-example-1 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-ncpi-research-study-01-patient-01.change.history.html b/Patient-ncpi-research-study-01-patient-01.change.history.html index 9e28b6e5..bd821158 100644 --- a/Patient-ncpi-research-study-01-patient-01.change.history.html +++ b/Patient-ncpi-research-study-01-patient-01.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Patient/ncpi-research-study-01-patient-01 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-ncpi-research-study-01-patient-01.html b/Patient-ncpi-research-study-01-patient-01.html index a8f98776..078d7723 100644 --- a/Patient-ncpi-research-study-01-patient-01.html +++ b/Patient-ncpi-research-study-01-patient-01.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -318,7 +318,7 @@ <h2 id="root">Example Patient: ncpi-research-study-01-patient-01</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-ncpi-research-study-01-patient-01.json b/Patient-ncpi-research-study-01-patient-01.json index 8277c8de..4eaf5e13 100644 --- a/Patient-ncpi-research-study-01-patient-01.json +++ b/Patient-ncpi-research-study-01-patient-01.json @@ -1,45 +1,39 @@ -{ - "resourceType": "Patient", - "id": "ncpi-research-study-01-patient-01", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>Anonymous Patient</b> female, DoB Unknown</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2135-2\">Race & Ethnicity - CDC</a> 2135-2: Hispanic or Latino</li><li>text: Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race & Ethnicity - CDC</a> 2106-3: White</li><li>text: White</li></ul></td></tr></table></div>" - }, - "extension": [ - { - "extension": [ - { - "url": "ombCategory", - "valueCoding": { - "system": "urn:oid:2.16.840.1.113883.6.238", - "code": "2106-3", - "display": "White" - } - }, - { - "url": "text", - "valueString": "White" - } - ], - "url": "http://hl7.org/fhir/us/core/StructureDefinition/us-core-race" - }, - { - "extension": [ - { - "url": "ombCategory", - "valueCoding": { - "system": "urn:oid:2.16.840.1.113883.6.238", - "code": "2135-2", - "display": "Hispanic or Latino" - } - }, - { - "url": "text", - "valueString": "Hispanic or Latino" - } - ], - "url": "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" - } - ], - "gender": "female" +{ + "resourceType" : "Patient", + "id" : "ncpi-research-study-01-patient-01", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>Anonymous Patient</b> female, DoB Unknown</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2135-2\">Race & Ethnicity - CDC</a> 2135-2: Hispanic or Latino</li><li>text: Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race & Ethnicity - CDC</a> 2106-3: White</li><li>text: White</li></ul></td></tr></table></div>" + }, + "extension" : [{ + "extension" : [{ + "url" : "ombCategory", + "valueCoding" : { + "system" : "urn:oid:2.16.840.1.113883.6.238", + "code" : "2106-3", + "display" : "White" + } + }, + { + "url" : "text", + "valueString" : "White" + }], + "url" : "http://hl7.org/fhir/us/core/StructureDefinition/us-core-race" + }, + { + "extension" : [{ + "url" : "ombCategory", + "valueCoding" : { + "system" : "urn:oid:2.16.840.1.113883.6.238", + "code" : "2135-2", + "display" : "Hispanic or Latino" + } + }, + { + "url" : "text", + "valueString" : "Hispanic or Latino" + }], + "url" : "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" + }], + "gender" : "female" } \ No newline at end of file diff --git a/Patient-ncpi-research-study-01-patient-01.json.html b/Patient-ncpi-research-study-01-patient-01.json.html index 2e01ea46..f20c9215 100644 --- a/Patient-ncpi-research-study-01-patient-01.json.html +++ b/Patient-ncpi-research-study-01-patient-01.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -357,7 +357,7 @@ <h2 id="root">: ncpi-research-study-01-patient-01 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-ncpi-research-study-01-patient-01.ttl b/Patient-ncpi-research-study-01-patient-01.ttl index 8a743dba..2731705c 100644 --- a/Patient-ncpi-research-study-01-patient-01.ttl +++ b/Patient-ncpi-research-study-01-patient-01.ttl @@ -7,11 +7,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/ncpi-research-study-01-patient-01> a fhir:Patient; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "ncpi-research-study-01-patient-01"]; + fhir:Resource.id [ fhir:value "ncpi-research-study-01-patient-01"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>Anonymous Patient</b> female, DoB Unknown</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2135-2\">Race & Ethnicity - CDC</a> 2135-2: Hispanic or Latino</li><li>text: Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race & Ethnicity - CDC</a> 2106-3: White</li><li>text: White</li></ul></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Element.extension [ @@ -44,8 +44,8 @@ fhir:Extension.valueString [ fhir:value "Hispanic or Latino" ] ]; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" ] - ]; - fhir:Patient.gender [ fhir:value "female"] . + ]; # + fhir:Patient.gender [ fhir:value "female"] . # # - ontology header ------------------------------------------------------------ diff --git a/Patient-ncpi-research-study-01-patient-01.ttl.html b/Patient-ncpi-research-study-01-patient-01.ttl.html index 21251a16..5351e687 100644 --- a/Patient-ncpi-research-study-01-patient-01.ttl.html +++ b/Patient-ncpi-research-study-01-patient-01.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,11 +292,11 @@ <h2 id="root">: ncpi-research-study-01-patient-01 - TTL Representation</h2> a fhir:Patient; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/patient.html#Patient.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-research-study-01-patient-01"]; + <a href="http://hl7.org/fhir/R4/patient.html#Patient.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-research-study-01-patient-01"]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>Anonymous Patient</b> female, DoB Unknown</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2135-2\">Race &amp; Ethnicity - CDC</a> 2135-2: Hispanic or Latino</li><li>text: Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race &amp; Ethnicity - CDC</a> 2106-3: White</li><li>text: White</li></ul></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.extension">fhir:Element.extension</a> [ @@ -323,8 +323,8 @@ <h2 id="root">: ncpi-research-study-01-patient-01 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "text" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueString</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Hispanic or Latino" ] ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" ] - ]; - <a href="http://hl7.org/fhir/R4/patient.html#Patient.gender">fhir:Patient.gender</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "female"]. + ]; # + <a href="http://hl7.org/fhir/R4/patient.html#Patient.gender">fhir:Patient.gender</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "female"]. # # - ontology header ------------------------------------------------------------ @@ -362,7 +362,7 @@ <h2 id="root">: ncpi-research-study-01-patient-01 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-ncpi-research-study-01-patient-01.xml.html b/Patient-ncpi-research-study-01-patient-01.xml.html index af8bb718..5e6d9db1 100644 --- a/Patient-ncpi-research-study-01-patient-01.xml.html +++ b/Patient-ncpi-research-study-01-patient-01.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -353,7 +353,7 @@ <h2 id="root">: ncpi-research-study-01-patient-01 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-ncpi-research-study-01-patient-02.change.history.html b/Patient-ncpi-research-study-01-patient-02.change.history.html index a8e0ea67..552c29ae 100644 --- a/Patient-ncpi-research-study-01-patient-02.change.history.html +++ b/Patient-ncpi-research-study-01-patient-02.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Patient/ncpi-research-study-01-patient-02 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-ncpi-research-study-01-patient-02.html b/Patient-ncpi-research-study-01-patient-02.html index 21b9babe..97c6ebd1 100644 --- a/Patient-ncpi-research-study-01-patient-02.html +++ b/Patient-ncpi-research-study-01-patient-02.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -318,7 +318,7 @@ <h2 id="root">Example Patient: ncpi-research-study-01-patient-02</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-ncpi-research-study-01-patient-02.json b/Patient-ncpi-research-study-01-patient-02.json index 9f6fcb30..0f24add5 100644 --- a/Patient-ncpi-research-study-01-patient-02.json +++ b/Patient-ncpi-research-study-01-patient-02.json @@ -1,45 +1,39 @@ -{ - "resourceType": "Patient", - "id": "ncpi-research-study-01-patient-02", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>Anonymous Patient</b> male, DoB Unknown</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2186-5\">Race & Ethnicity - CDC</a> 2186-5: Not Hispanic or Latino</li><li>text: Not Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race & Ethnicity - CDC</a> 2106-3: White</li><li>text: White</li></ul></td></tr></table></div>" - }, - "extension": [ - { - "extension": [ - { - "url": "ombCategory", - "valueCoding": { - "system": "urn:oid:2.16.840.1.113883.6.238", - "code": "2106-3", - "display": "White" - } - }, - { - "url": "text", - "valueString": "White" - } - ], - "url": "http://hl7.org/fhir/us/core/StructureDefinition/us-core-race" - }, - { - "extension": [ - { - "url": "ombCategory", - "valueCoding": { - "system": "urn:oid:2.16.840.1.113883.6.238", - "code": "2186-5", - "display": "Not Hispanic or Latino" - } - }, - { - "url": "text", - "valueString": "Not Hispanic or Latino" - } - ], - "url": "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" - } - ], - "gender": "male" +{ + "resourceType" : "Patient", + "id" : "ncpi-research-study-01-patient-02", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>Anonymous Patient</b> male, DoB Unknown</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2186-5\">Race & Ethnicity - CDC</a> 2186-5: Not Hispanic or Latino</li><li>text: Not Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race & Ethnicity - CDC</a> 2106-3: White</li><li>text: White</li></ul></td></tr></table></div>" + }, + "extension" : [{ + "extension" : [{ + "url" : "ombCategory", + "valueCoding" : { + "system" : "urn:oid:2.16.840.1.113883.6.238", + "code" : "2106-3", + "display" : "White" + } + }, + { + "url" : "text", + "valueString" : "White" + }], + "url" : "http://hl7.org/fhir/us/core/StructureDefinition/us-core-race" + }, + { + "extension" : [{ + "url" : "ombCategory", + "valueCoding" : { + "system" : "urn:oid:2.16.840.1.113883.6.238", + "code" : "2186-5", + "display" : "Not Hispanic or Latino" + } + }, + { + "url" : "text", + "valueString" : "Not Hispanic or Latino" + }], + "url" : "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" + }], + "gender" : "male" } \ No newline at end of file diff --git a/Patient-ncpi-research-study-01-patient-02.json.html b/Patient-ncpi-research-study-01-patient-02.json.html index ca2e13fd..68a1a3a5 100644 --- a/Patient-ncpi-research-study-01-patient-02.json.html +++ b/Patient-ncpi-research-study-01-patient-02.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -357,7 +357,7 @@ <h2 id="root">: ncpi-research-study-01-patient-02 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-ncpi-research-study-01-patient-02.ttl b/Patient-ncpi-research-study-01-patient-02.ttl index e7468085..43f171e1 100644 --- a/Patient-ncpi-research-study-01-patient-02.ttl +++ b/Patient-ncpi-research-study-01-patient-02.ttl @@ -7,11 +7,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/ncpi-research-study-01-patient-02> a fhir:Patient; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "ncpi-research-study-01-patient-02"]; + fhir:Resource.id [ fhir:value "ncpi-research-study-01-patient-02"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>Anonymous Patient</b> male, DoB Unknown</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2186-5\">Race & Ethnicity - CDC</a> 2186-5: Not Hispanic or Latino</li><li>text: Not Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race & Ethnicity - CDC</a> 2106-3: White</li><li>text: White</li></ul></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Element.extension [ @@ -44,8 +44,8 @@ fhir:Extension.valueString [ fhir:value "Not Hispanic or Latino" ] ]; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" ] - ]; - fhir:Patient.gender [ fhir:value "male"] . + ]; # + fhir:Patient.gender [ fhir:value "male"] . # # - ontology header ------------------------------------------------------------ diff --git a/Patient-ncpi-research-study-01-patient-02.ttl.html b/Patient-ncpi-research-study-01-patient-02.ttl.html index 79a2e139..cb4d5dc9 100644 --- a/Patient-ncpi-research-study-01-patient-02.ttl.html +++ b/Patient-ncpi-research-study-01-patient-02.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,11 +292,11 @@ <h2 id="root">: ncpi-research-study-01-patient-02 - TTL Representation</h2> a fhir:Patient; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/patient.html#Patient.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-research-study-01-patient-02"]; + <a href="http://hl7.org/fhir/R4/patient.html#Patient.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-research-study-01-patient-02"]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>Anonymous Patient</b> male, DoB Unknown</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2186-5\">Race &amp; Ethnicity - CDC</a> 2186-5: Not Hispanic or Latino</li><li>text: Not Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race &amp; Ethnicity - CDC</a> 2106-3: White</li><li>text: White</li></ul></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.extension">fhir:Element.extension</a> [ @@ -323,8 +323,8 @@ <h2 id="root">: ncpi-research-study-01-patient-02 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "text" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueString</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Not Hispanic or Latino" ] ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" ] - ]; - <a href="http://hl7.org/fhir/R4/patient.html#Patient.gender">fhir:Patient.gender</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "male"]. + ]; # + <a href="http://hl7.org/fhir/R4/patient.html#Patient.gender">fhir:Patient.gender</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "male"]. # # - ontology header ------------------------------------------------------------ @@ -362,7 +362,7 @@ <h2 id="root">: ncpi-research-study-01-patient-02 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-ncpi-research-study-01-patient-02.xml.html b/Patient-ncpi-research-study-01-patient-02.xml.html index fb730e75..3b99e86a 100644 --- a/Patient-ncpi-research-study-01-patient-02.xml.html +++ b/Patient-ncpi-research-study-01-patient-02.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -353,7 +353,7 @@ <h2 id="root">: ncpi-research-study-01-patient-02 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-patient-example-1.change.history.html b/Patient-patient-example-1.change.history.html index fa69720d..8526a955 100644 --- a/Patient-patient-example-1.change.history.html +++ b/Patient-patient-example-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Patient/patient-example-1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-patient-example-1.html b/Patient-patient-example-1.html index 80393823..f46eae52 100644 --- a/Patient-patient-example-1.html +++ b/Patient-patient-example-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -318,7 +318,7 @@ <h2 id="root">Example Patient: patient-example-1</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-patient-example-1.json b/Patient-patient-example-1.json index d836c509..003f2eba 100644 --- a/Patient-patient-example-1.json +++ b/Patient-patient-example-1.json @@ -1,182 +1,144 @@ -{ - "resourceType": "Patient", - "id": "patient-example-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>Mariah Abigail Smith(OFFICIAL)</b> female, DoB: 2019-06-15</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Ways to contact the Patient\">Contact Details:</td><td colspan=\"3\"><ul><li>ph: (555) 555-5555(HOME)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Nominated Contact: Parent\">Emergency Contact:</td><td colspan=\"3\"><ul><li>Jane Samantha Smith(OFFICIAL) (female)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li><li>ph: (555) 555-5555(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Nominated Contact: Parent\">Emergency Contact:</td><td colspan=\"3\"><ul><li>John Samuel Smith(OFFICIAL) (male)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li><li>ph: (555) 555-5555(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2135-2\">Race & Ethnicity - CDC</a> 2135-2: Hispanic or Latino</li><li>detailed: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2148-5\">Race & Ethnicity - CDC</a> 2148-5: Mexican</li><li>text: Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race & Ethnicity - CDC</a> 2106-3: White</li><li>detailed: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2113-9\">Race & Ethnicity - CDC</a> 2113-9: Irish</li><li>text: White</li></ul></td></tr></table></div>" - }, - "extension": [ - { - "extension": [ - { - "url": "ombCategory", - "valueCoding": { - "system": "urn:oid:2.16.840.1.113883.6.238", - "code": "2106-3", - "display": "White" - } - }, - { - "url": "detailed", - "valueCoding": { - "system": "urn:oid:2.16.840.1.113883.6.238", - "code": "2113-9", - "display": "Irish" - } - }, - { - "url": "text", - "valueString": "White" - } - ], - "url": "http://hl7.org/fhir/us/core/StructureDefinition/us-core-race" - }, - { - "extension": [ - { - "url": "ombCategory", - "valueCoding": { - "system": "urn:oid:2.16.840.1.113883.6.238", - "code": "2135-2", - "display": "Hispanic or Latino" - } - }, - { - "url": "detailed", - "valueCoding": { - "system": "urn:oid:2.16.840.1.113883.6.238", - "code": "2148-5", - "display": "Mexican" - } - }, - { - "url": "text", - "valueString": "Hispanic or Latino" - } - ], - "url": "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" - } - ], - "name": [ - { - "use": "official", - "text": "Mariah Abigail Smith", - "family": "Smith", - "given": [ - "Mariah", - "Abigail" - ] - } - ], - "telecom": [ - { - "system": "phone", - "value": "(555) 555-5555", - "use": "home", - "rank": 1 - } - ], - "gender": "female", - "birthDate": "2019-06-15", - "address": [ - { - "use": "home", - "type": "both", - "text": "3401 Civic Center Blvd., Philadelphia, PA 19104", - "line": [ - "3401 Civic Center Blvd." - ], - "city": "Philadelphia", - "state": "PA", - "postalCode": "19104" - } - ], - "contact": [ - { - "relationship": [ - { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/v2-0131", - "code": "C", - "display": "Emergency Contact" - } - ], - "text": "Parent" - } - ], - "name": { - "use": "official", - "text": "Jane Samantha Smith", - "family": "Smith", - "given": [ - "Jane", - "Samantha" - ] - }, - "telecom": [ - { - "system": "phone", - "value": "(555) 555-5555", - "use": "home", - "rank": 1 - } - ], - "address": { - "use": "home", - "type": "both", - "text": "3401 Civic Center Blvd., Philadelphia, PA 19104", - "line": [ - "3401 Civic Center Blvd." - ], - "city": "Philadelphia", - "state": "PA", - "postalCode": "19104" - }, - "gender": "female" - }, - { - "relationship": [ - { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/v2-0131", - "code": "C", - "display": "Emergency Contact" - } - ], - "text": "Parent" - } - ], - "name": { - "use": "official", - "text": "John Samuel Smith", - "family": "Smith", - "given": [ - "John", - "Samuel" - ] - }, - "telecom": [ - { - "system": "phone", - "value": "(555) 555-5555", - "use": "home", - "rank": 1 - } - ], - "address": { - "use": "home", - "type": "both", - "text": "3401 Civic Center Blvd., Philadelphia, PA 19104", - "line": [ - "3401 Civic Center Blvd." - ], - "city": "Philadelphia", - "state": "PA", - "postalCode": "19104" - }, - "gender": "male" - } - ] +{ + "resourceType" : "Patient", + "id" : "patient-example-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>Mariah Abigail Smith(OFFICIAL)</b> female, DoB: 2019-06-15</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Ways to contact the Patient\">Contact Details:</td><td colspan=\"3\"><ul><li>ph: (555) 555-5555(HOME)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Nominated Contact: Parent\">Emergency Contact:</td><td colspan=\"3\"><ul><li>Jane Samantha Smith(OFFICIAL) (female)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li><li>ph: (555) 555-5555(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Nominated Contact: Parent\">Emergency Contact:</td><td colspan=\"3\"><ul><li>John Samuel Smith(OFFICIAL) (male)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li><li>ph: (555) 555-5555(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2135-2\">Race & Ethnicity - CDC</a> 2135-2: Hispanic or Latino</li><li>detailed: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2148-5\">Race & Ethnicity - CDC</a> 2148-5: Mexican</li><li>text: Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race & Ethnicity - CDC</a> 2106-3: White</li><li>detailed: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2113-9\">Race & Ethnicity - CDC</a> 2113-9: Irish</li><li>text: White</li></ul></td></tr></table></div>" + }, + "extension" : [{ + "extension" : [{ + "url" : "ombCategory", + "valueCoding" : { + "system" : "urn:oid:2.16.840.1.113883.6.238", + "code" : "2106-3", + "display" : "White" + } + }, + { + "url" : "detailed", + "valueCoding" : { + "system" : "urn:oid:2.16.840.1.113883.6.238", + "code" : "2113-9", + "display" : "Irish" + } + }, + { + "url" : "text", + "valueString" : "White" + }], + "url" : "http://hl7.org/fhir/us/core/StructureDefinition/us-core-race" + }, + { + "extension" : [{ + "url" : "ombCategory", + "valueCoding" : { + "system" : "urn:oid:2.16.840.1.113883.6.238", + "code" : "2135-2", + "display" : "Hispanic or Latino" + } + }, + { + "url" : "detailed", + "valueCoding" : { + "system" : "urn:oid:2.16.840.1.113883.6.238", + "code" : "2148-5", + "display" : "Mexican" + } + }, + { + "url" : "text", + "valueString" : "Hispanic or Latino" + }], + "url" : "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" + }], + "name" : [{ + "use" : "official", + "text" : "Mariah Abigail Smith", + "family" : "Smith", + "given" : ["Mariah", + "Abigail"] + }], + "telecom" : [{ + "system" : "phone", + "value" : "(555) 555-5555", + "use" : "home", + "rank" : 1 + }], + "gender" : "female", + "birthDate" : "2019-06-15", + "address" : [{ + "use" : "home", + "type" : "both", + "text" : "3401 Civic Center Blvd., Philadelphia, PA 19104", + "line" : ["3401 Civic Center Blvd."], + "city" : "Philadelphia", + "state" : "PA", + "postalCode" : "19104" + }], + "contact" : [{ + "relationship" : [{ + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/v2-0131", + "code" : "C", + "display" : "Emergency Contact" + }], + "text" : "Parent" + }], + "name" : { + "use" : "official", + "text" : "Jane Samantha Smith", + "family" : "Smith", + "given" : ["Jane", + "Samantha"] + }, + "telecom" : [{ + "system" : "phone", + "value" : "(555) 555-5555", + "use" : "home", + "rank" : 1 + }], + "address" : { + "use" : "home", + "type" : "both", + "text" : "3401 Civic Center Blvd., Philadelphia, PA 19104", + "line" : ["3401 Civic Center Blvd."], + "city" : "Philadelphia", + "state" : "PA", + "postalCode" : "19104" + }, + "gender" : "female" + }, + { + "relationship" : [{ + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/v2-0131", + "code" : "C", + "display" : "Emergency Contact" + }], + "text" : "Parent" + }], + "name" : { + "use" : "official", + "text" : "John Samuel Smith", + "family" : "Smith", + "given" : ["John", + "Samuel"] + }, + "telecom" : [{ + "system" : "phone", + "value" : "(555) 555-5555", + "use" : "home", + "rank" : 1 + }], + "address" : { + "use" : "home", + "type" : "both", + "text" : "3401 Civic Center Blvd., Philadelphia, PA 19104", + "line" : ["3401 Civic Center Blvd."], + "city" : "Philadelphia", + "state" : "PA", + "postalCode" : "19104" + }, + "gender" : "male" + }] } \ No newline at end of file diff --git a/Patient-patient-example-1.json.html b/Patient-patient-example-1.json.html index 2ed3fbc7..b393c4d6 100644 --- a/Patient-patient-example-1.json.html +++ b/Patient-patient-example-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -494,7 +494,7 @@ <h2 id="root">: patient-example-1 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-patient-example-1.ttl b/Patient-patient-example-1.ttl index 2e78d5e0..4c097108 100644 --- a/Patient-patient-example-1.ttl +++ b/Patient-patient-example-1.ttl @@ -7,11 +7,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-1> a fhir:Patient; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "patient-example-1"]; + fhir:Resource.id [ fhir:value "patient-example-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>Mariah Abigail Smith(OFFICIAL)</b> female, DoB: 2019-06-15</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Ways to contact the Patient\">Contact Details:</td><td colspan=\"3\"><ul><li>ph: (555) 555-5555(HOME)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Nominated Contact: Parent\">Emergency Contact:</td><td colspan=\"3\"><ul><li>Jane Samantha Smith(OFFICIAL) (female)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li><li>ph: (555) 555-5555(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Nominated Contact: Parent\">Emergency Contact:</td><td colspan=\"3\"><ul><li>John Samuel Smith(OFFICIAL) (male)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li><li>ph: (555) 555-5555(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2135-2\">Race & Ethnicity - CDC</a> 2135-2: Hispanic or Latino</li><li>detailed: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2148-5\">Race & Ethnicity - CDC</a> 2148-5: Mexican</li><li>text: Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race & Ethnicity - CDC</a> 2106-3: White</li><li>detailed: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2113-9\">Race & Ethnicity - CDC</a> 2113-9: Irish</li><li>text: White</li></ul></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Element.extension [ @@ -60,7 +60,7 @@ fhir:Extension.valueString [ fhir:value "Hispanic or Latino" ] ]; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" ] - ]; + ]; # fhir:Patient.name [ fhir:index 0; fhir:HumanName.use [ fhir:value "official" ]; @@ -73,16 +73,16 @@ fhir:value "Abigail"; fhir:index 1 ] - ]; + ]; # fhir:Patient.telecom [ fhir:index 0; fhir:ContactPoint.system [ fhir:value "phone" ]; fhir:ContactPoint.value [ fhir:value "(555) 555-5555" ]; fhir:ContactPoint.use [ fhir:value "home" ]; fhir:ContactPoint.rank [ fhir:value "1"^^xsd:positiveInteger ] - ]; - fhir:Patient.gender [ fhir:value "female"]; - fhir:Patient.birthDate [ fhir:value "2019-06-15"^^xsd:date]; + ]; # + fhir:Patient.gender [ fhir:value "female"]; # + fhir:Patient.birthDate [ fhir:value "2019-06-15"^^xsd:date]; # fhir:Patient.address [ fhir:index 0; fhir:Address.use [ fhir:value "home" ]; @@ -95,7 +95,7 @@ fhir:Address.city [ fhir:value "Philadelphia" ]; fhir:Address.state [ fhir:value "PA" ]; fhir:Address.postalCode [ fhir:value "19104" ] - ]; + ]; # fhir:Patient.contact [ fhir:index 0; fhir:Patient.contact.relationship [ @@ -184,7 +184,7 @@ fhir:Address.postalCode [ fhir:value "19104" ] ]; fhir:Patient.contact.gender [ fhir:value "male" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Patient-patient-example-1.ttl.html b/Patient-patient-example-1.ttl.html index 5180fc4c..50163040 100644 --- a/Patient-patient-example-1.ttl.html +++ b/Patient-patient-example-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,11 +292,11 @@ <h2 id="root">: patient-example-1 - TTL Representation</h2> a fhir:Patient; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/patient.html#Patient.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "patient-example-1"]; + <a href="http://hl7.org/fhir/R4/patient.html#Patient.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "patient-example-1"]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>Mariah Abigail Smith(OFFICIAL)</b> female, DoB: 2019-06-15</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Ways to contact the Patient\">Contact Details:</td><td colspan=\"3\"><ul><li>ph: (555) 555-5555(HOME)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Nominated Contact: Parent\">Emergency Contact:</td><td colspan=\"3\"><ul><li>Jane Samantha Smith(OFFICIAL) (female)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li><li>ph: (555) 555-5555(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Nominated Contact: Parent\">Emergency Contact:</td><td colspan=\"3\"><ul><li>John Samuel Smith(OFFICIAL) (male)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li><li>ph: (555) 555-5555(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2135-2\">Race &amp; Ethnicity - CDC</a> 2135-2: Hispanic or Latino</li><li>detailed: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2148-5\">Race &amp; Ethnicity - CDC</a> 2148-5: Mexican</li><li>text: Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race &amp; Ethnicity - CDC</a> 2106-3: White</li><li>detailed: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2113-9\">Race &amp; Ethnicity - CDC</a> 2113-9: Irish</li><li>text: White</li></ul></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.extension">fhir:Element.extension</a> [ @@ -335,7 +335,7 @@ <h2 id="root">: patient-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "text" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueString</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Hispanic or Latino" ] ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.name">fhir:Patient.name</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#HumanName#HumanName.use">fhir:HumanName.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "official" ]; @@ -346,16 +346,16 @@ <h2 id="root">: patient-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0 ], [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Abigail"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1 ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.telecom">fhir:Patient.telecom</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "phone" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "(555) 555-5555" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "home" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.rank">fhir:ContactPoint.rank</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#positiveInt">fhir:value</a> "1"^^xsd:positiveInteger ] - ]; - <a href="http://hl7.org/fhir/R4/patient.html#Patient.gender">fhir:Patient.gender</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "female"]; - <a href="http://hl7.org/fhir/R4/patient.html#Patient.birthDate">fhir:Patient.birthDate</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#date">fhir:value</a> "2019-06-15"^^xsd:date]; + ]; # + <a href="http://hl7.org/fhir/R4/patient.html#Patient.gender">fhir:Patient.gender</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "female"]; # + <a href="http://hl7.org/fhir/R4/patient.html#Patient.birthDate">fhir:Patient.birthDate</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#date">fhir:value</a> "2019-06-15"^^xsd:date]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.address">fhir:Patient.address</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.use">fhir:Address.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "home" ]; @@ -367,7 +367,7 @@ <h2 id="root">: patient-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.city">fhir:Address.city</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Philadelphia" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.state">fhir:Address.state</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "PA" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.postalCode">fhir:Address.postalCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "19104" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.contact">fhir:Patient.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/patient.html#Patient.contact.relationship">fhir:Patient.contact.relationship</a> [ @@ -440,7 +440,7 @@ <h2 id="root">: patient-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.state">fhir:Address.state</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "PA" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.postalCode">fhir:Address.postalCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "19104" ] ]; <a href="http://hl7.org/fhir/R4/patient.html#Patient.contact.gender">fhir:Patient.contact.gender</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "male" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -478,7 +478,7 @@ <h2 id="root">: patient-example-1 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-patient-example-1.xml.html b/Patient-patient-example-1.xml.html index 7ce7b52a..503505c7 100644 --- a/Patient-patient-example-1.xml.html +++ b/Patient-patient-example-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -456,7 +456,7 @@ <h2 id="root">: patient-example-1 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-patient-example-2.change.history.html b/Patient-patient-example-2.change.history.html index 35b034f2..acd68156 100644 --- a/Patient-patient-example-2.change.history.html +++ b/Patient-patient-example-2.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Patient/patient-example-2 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-patient-example-2.html b/Patient-patient-example-2.html index 7899c132..5b08ae1c 100644 --- a/Patient-patient-example-2.html +++ b/Patient-patient-example-2.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -318,7 +318,7 @@ <h2 id="root">Example Patient: patient-example-2</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-patient-example-2.json b/Patient-patient-example-2.json index 8c9f06aa..4a53909b 100644 --- a/Patient-patient-example-2.json +++ b/Patient-patient-example-2.json @@ -1,130 +1,102 @@ -{ - "resourceType": "Patient", - "id": "patient-example-2", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>Jane Samantha Smith(OFFICIAL)</b> female, DoB Unknown</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Ways to contact the Patient\">Contact Details:</td><td colspan=\"3\"><ul><li>ph: (555) 555-5555(HOME)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Nominated Contact: Spouse\">Emergency Contact:</td><td colspan=\"3\"><ul><li>John Samuel Smith(OFFICIAL) (male)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li><li>ph: (555) 555-5555(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2135-2\">Race & Ethnicity - CDC</a> 2135-2: Hispanic or Latino</li><li>detailed: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2148-5\">Race & Ethnicity - CDC</a> 2148-5: Mexican</li><li>text: Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race & Ethnicity - CDC</a> 2106-3: White</li><li>text: White</li></ul></td></tr></table></div>" - }, - "extension": [ - { - "extension": [ - { - "url": "ombCategory", - "valueCoding": { - "system": "urn:oid:2.16.840.1.113883.6.238", - "code": "2106-3", - "display": "White" - } - }, - { - "url": "text", - "valueString": "White" - } - ], - "url": "http://hl7.org/fhir/us/core/StructureDefinition/us-core-race" - }, - { - "extension": [ - { - "url": "ombCategory", - "valueCoding": { - "system": "urn:oid:2.16.840.1.113883.6.238", - "code": "2135-2", - "display": "Hispanic or Latino" - } - }, - { - "url": "detailed", - "valueCoding": { - "system": "urn:oid:2.16.840.1.113883.6.238", - "code": "2148-5", - "display": "Mexican" - } - }, - { - "url": "text", - "valueString": "Hispanic or Latino" - } - ], - "url": "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" - } - ], - "name": [ - { - "use": "official", - "text": "Jane Samantha Smith", - "family": "Smith", - "given": [ - "Jane", - "Samantha" - ] - } - ], - "telecom": [ - { - "system": "phone", - "value": "(555) 555-5555", - "use": "home", - "rank": 1 - } - ], - "gender": "female", - "address": [ - { - "use": "home", - "type": "both", - "text": "3401 Civic Center Blvd., Philadelphia, PA 19104", - "line": [ - "3401 Civic Center Blvd." - ], - "city": "Philadelphia", - "state": "PA", - "postalCode": "19104" - } - ], - "contact": [ - { - "relationship": [ - { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/v2-0131", - "code": "C", - "display": "Emergency Contact" - } - ], - "text": "Spouse" - } - ], - "name": { - "use": "official", - "text": "John Samuel Smith", - "family": "Smith", - "given": [ - "John", - "Samuel" - ] - }, - "telecom": [ - { - "system": "phone", - "value": "(555) 555-5555", - "use": "home", - "rank": 1 - } - ], - "address": { - "use": "home", - "type": "both", - "text": "3401 Civic Center Blvd., Philadelphia, PA 19104", - "line": [ - "3401 Civic Center Blvd." - ], - "city": "Philadelphia", - "state": "PA", - "postalCode": "19104" - }, - "gender": "male" - } - ] +{ + "resourceType" : "Patient", + "id" : "patient-example-2", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>Jane Samantha Smith(OFFICIAL)</b> female, DoB Unknown</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Ways to contact the Patient\">Contact Details:</td><td colspan=\"3\"><ul><li>ph: (555) 555-5555(HOME)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Nominated Contact: Spouse\">Emergency Contact:</td><td colspan=\"3\"><ul><li>John Samuel Smith(OFFICIAL) (male)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li><li>ph: (555) 555-5555(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2135-2\">Race & Ethnicity - CDC</a> 2135-2: Hispanic or Latino</li><li>detailed: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2148-5\">Race & Ethnicity - CDC</a> 2148-5: Mexican</li><li>text: Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race & Ethnicity - CDC</a> 2106-3: White</li><li>text: White</li></ul></td></tr></table></div>" + }, + "extension" : [{ + "extension" : [{ + "url" : "ombCategory", + "valueCoding" : { + "system" : "urn:oid:2.16.840.1.113883.6.238", + "code" : "2106-3", + "display" : "White" + } + }, + { + "url" : "text", + "valueString" : "White" + }], + "url" : "http://hl7.org/fhir/us/core/StructureDefinition/us-core-race" + }, + { + "extension" : [{ + "url" : "ombCategory", + "valueCoding" : { + "system" : "urn:oid:2.16.840.1.113883.6.238", + "code" : "2135-2", + "display" : "Hispanic or Latino" + } + }, + { + "url" : "detailed", + "valueCoding" : { + "system" : "urn:oid:2.16.840.1.113883.6.238", + "code" : "2148-5", + "display" : "Mexican" + } + }, + { + "url" : "text", + "valueString" : "Hispanic or Latino" + }], + "url" : "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" + }], + "name" : [{ + "use" : "official", + "text" : "Jane Samantha Smith", + "family" : "Smith", + "given" : ["Jane", + "Samantha"] + }], + "telecom" : [{ + "system" : "phone", + "value" : "(555) 555-5555", + "use" : "home", + "rank" : 1 + }], + "gender" : "female", + "address" : [{ + "use" : "home", + "type" : "both", + "text" : "3401 Civic Center Blvd., Philadelphia, PA 19104", + "line" : ["3401 Civic Center Blvd."], + "city" : "Philadelphia", + "state" : "PA", + "postalCode" : "19104" + }], + "contact" : [{ + "relationship" : [{ + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/v2-0131", + "code" : "C", + "display" : "Emergency Contact" + }], + "text" : "Spouse" + }], + "name" : { + "use" : "official", + "text" : "John Samuel Smith", + "family" : "Smith", + "given" : ["John", + "Samuel"] + }, + "telecom" : [{ + "system" : "phone", + "value" : "(555) 555-5555", + "use" : "home", + "rank" : 1 + }], + "address" : { + "use" : "home", + "type" : "both", + "text" : "3401 Civic Center Blvd., Philadelphia, PA 19104", + "line" : ["3401 Civic Center Blvd."], + "city" : "Philadelphia", + "state" : "PA", + "postalCode" : "19104" + }, + "gender" : "male" + }] } \ No newline at end of file diff --git a/Patient-patient-example-2.json.html b/Patient-patient-example-2.json.html index 423d8515..1362764b 100644 --- a/Patient-patient-example-2.json.html +++ b/Patient-patient-example-2.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -442,7 +442,7 @@ <h2 id="root">: patient-example-2 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-patient-example-2.ttl b/Patient-patient-example-2.ttl index 0b12f04a..99118c28 100644 --- a/Patient-patient-example-2.ttl +++ b/Patient-patient-example-2.ttl @@ -7,11 +7,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-2> a fhir:Patient; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "patient-example-2"]; + fhir:Resource.id [ fhir:value "patient-example-2"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>Jane Samantha Smith(OFFICIAL)</b> female, DoB Unknown</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Ways to contact the Patient\">Contact Details:</td><td colspan=\"3\"><ul><li>ph: (555) 555-5555(HOME)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Nominated Contact: Spouse\">Emergency Contact:</td><td colspan=\"3\"><ul><li>John Samuel Smith(OFFICIAL) (male)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li><li>ph: (555) 555-5555(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2135-2\">Race & Ethnicity - CDC</a> 2135-2: Hispanic or Latino</li><li>detailed: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2148-5\">Race & Ethnicity - CDC</a> 2148-5: Mexican</li><li>text: Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race & Ethnicity - CDC</a> 2106-3: White</li><li>text: White</li></ul></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Element.extension [ @@ -52,7 +52,7 @@ fhir:Extension.valueString [ fhir:value "Hispanic or Latino" ] ]; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" ] - ]; + ]; # fhir:Patient.name [ fhir:index 0; fhir:HumanName.use [ fhir:value "official" ]; @@ -65,15 +65,15 @@ fhir:value "Samantha"; fhir:index 1 ] - ]; + ]; # fhir:Patient.telecom [ fhir:index 0; fhir:ContactPoint.system [ fhir:value "phone" ]; fhir:ContactPoint.value [ fhir:value "(555) 555-5555" ]; fhir:ContactPoint.use [ fhir:value "home" ]; fhir:ContactPoint.rank [ fhir:value "1"^^xsd:positiveInteger ] - ]; - fhir:Patient.gender [ fhir:value "female"]; + ]; # + fhir:Patient.gender [ fhir:value "female"]; # fhir:Patient.address [ fhir:index 0; fhir:Address.use [ fhir:value "home" ]; @@ -86,7 +86,7 @@ fhir:Address.city [ fhir:value "Philadelphia" ]; fhir:Address.state [ fhir:value "PA" ]; fhir:Address.postalCode [ fhir:value "19104" ] - ]; + ]; # fhir:Patient.contact [ fhir:index 0; fhir:Patient.contact.relationship [ @@ -131,7 +131,7 @@ fhir:Address.postalCode [ fhir:value "19104" ] ]; fhir:Patient.contact.gender [ fhir:value "male" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Patient-patient-example-2.ttl.html b/Patient-patient-example-2.ttl.html index 3ad346b1..1d64b790 100644 --- a/Patient-patient-example-2.ttl.html +++ b/Patient-patient-example-2.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,11 +292,11 @@ <h2 id="root">: patient-example-2 - TTL Representation</h2> a fhir:Patient; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/patient.html#Patient.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "patient-example-2"]; + <a href="http://hl7.org/fhir/R4/patient.html#Patient.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "patient-example-2"]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>Jane Samantha Smith(OFFICIAL)</b> female, DoB Unknown</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Ways to contact the Patient\">Contact Details:</td><td colspan=\"3\"><ul><li>ph: (555) 555-5555(HOME)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Nominated Contact: Spouse\">Emergency Contact:</td><td colspan=\"3\"><ul><li>John Samuel Smith(OFFICIAL) (male)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li><li>ph: (555) 555-5555(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2135-2\">Race &amp; Ethnicity - CDC</a> 2135-2: Hispanic or Latino</li><li>detailed: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2148-5\">Race &amp; Ethnicity - CDC</a> 2148-5: Mexican</li><li>text: Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race &amp; Ethnicity - CDC</a> 2106-3: White</li><li>text: White</li></ul></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.extension">fhir:Element.extension</a> [ @@ -329,7 +329,7 @@ <h2 id="root">: patient-example-2 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "text" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueString</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Hispanic or Latino" ] ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.name">fhir:Patient.name</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#HumanName#HumanName.use">fhir:HumanName.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "official" ]; @@ -340,15 +340,15 @@ <h2 id="root">: patient-example-2 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0 ], [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Samantha"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1 ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.telecom">fhir:Patient.telecom</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "phone" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "(555) 555-5555" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "home" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.rank">fhir:ContactPoint.rank</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#positiveInt">fhir:value</a> "1"^^xsd:positiveInteger ] - ]; - <a href="http://hl7.org/fhir/R4/patient.html#Patient.gender">fhir:Patient.gender</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "female"]; + ]; # + <a href="http://hl7.org/fhir/R4/patient.html#Patient.gender">fhir:Patient.gender</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "female"]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.address">fhir:Patient.address</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.use">fhir:Address.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "home" ]; @@ -360,7 +360,7 @@ <h2 id="root">: patient-example-2 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.city">fhir:Address.city</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Philadelphia" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.state">fhir:Address.state</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "PA" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.postalCode">fhir:Address.postalCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "19104" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.contact">fhir:Patient.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/patient.html#Patient.contact.relationship">fhir:Patient.contact.relationship</a> [ @@ -397,7 +397,7 @@ <h2 id="root">: patient-example-2 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.state">fhir:Address.state</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "PA" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.postalCode">fhir:Address.postalCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "19104" ] ]; <a href="http://hl7.org/fhir/R4/patient.html#Patient.contact.gender">fhir:Patient.contact.gender</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "male" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -435,7 +435,7 @@ <h2 id="root">: patient-example-2 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-patient-example-2.xml.html b/Patient-patient-example-2.xml.html index f83f068d..25f9b571 100644 --- a/Patient-patient-example-2.xml.html +++ b/Patient-patient-example-2.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -415,7 +415,7 @@ <h2 id="root">: patient-example-2 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-patient-example-3.change.history.html b/Patient-patient-example-3.change.history.html index 2d4a7ccd..6c48e10f 100644 --- a/Patient-patient-example-3.change.history.html +++ b/Patient-patient-example-3.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Patient/patient-example-3 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-patient-example-3.html b/Patient-patient-example-3.html index 855eccb7..f5785963 100644 --- a/Patient-patient-example-3.html +++ b/Patient-patient-example-3.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -318,7 +318,7 @@ <h2 id="root">Example Patient: patient-example-3</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-patient-example-3.json b/Patient-patient-example-3.json index ee03b7fd..bf6df345 100644 --- a/Patient-patient-example-3.json +++ b/Patient-patient-example-3.json @@ -1,130 +1,102 @@ -{ - "resourceType": "Patient", - "id": "patient-example-3", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>John Samuel Smith(OFFICIAL)</b> male, DoB Unknown</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Ways to contact the Patient\">Contact Details:</td><td colspan=\"3\"><ul><li>ph: (555) 555-5555(HOME)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Nominated Contact: Spouse\">Emergency Contact:</td><td colspan=\"3\"><ul><li>Jane Samantha Smith(OFFICIAL) (female)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li><li>ph: (555) 555-5555(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2186-5\">Race & Ethnicity - CDC</a> 2186-5: Not Hispanic or Latino</li><li>text: Not Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race & Ethnicity - CDC</a> 2106-3: White</li><li>detailed: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2113-9\">Race & Ethnicity - CDC</a> 2113-9: Irish</li><li>text: White</li></ul></td></tr></table></div>" - }, - "extension": [ - { - "extension": [ - { - "url": "ombCategory", - "valueCoding": { - "system": "urn:oid:2.16.840.1.113883.6.238", - "code": "2106-3", - "display": "White" - } - }, - { - "url": "detailed", - "valueCoding": { - "system": "urn:oid:2.16.840.1.113883.6.238", - "code": "2113-9", - "display": "Irish" - } - }, - { - "url": "text", - "valueString": "White" - } - ], - "url": "http://hl7.org/fhir/us/core/StructureDefinition/us-core-race" - }, - { - "extension": [ - { - "url": "ombCategory", - "valueCoding": { - "system": "urn:oid:2.16.840.1.113883.6.238", - "code": "2186-5", - "display": "Not Hispanic or Latino" - } - }, - { - "url": "text", - "valueString": "Not Hispanic or Latino" - } - ], - "url": "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" - } - ], - "name": [ - { - "use": "official", - "text": "John Samuel Smith", - "family": "Smith", - "given": [ - "Jone", - "Samuel" - ] - } - ], - "telecom": [ - { - "system": "phone", - "value": "(555) 555-5555", - "use": "home", - "rank": 1 - } - ], - "gender": "male", - "address": [ - { - "use": "home", - "type": "both", - "text": "3401 Civic Center Blvd., Philadelphia, PA 19104", - "line": [ - "3401 Civic Center Blvd." - ], - "city": "Philadelphia", - "state": "PA", - "postalCode": "19104" - } - ], - "contact": [ - { - "relationship": [ - { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/v2-0131", - "code": "C", - "display": "Emergency Contact" - } - ], - "text": "Spouse" - } - ], - "name": { - "use": "official", - "text": "Jane Samantha Smith", - "family": "Smith", - "given": [ - "Jane", - "Samantha" - ] - }, - "telecom": [ - { - "system": "phone", - "value": "(555) 555-5555", - "use": "home", - "rank": 1 - } - ], - "address": { - "use": "home", - "type": "both", - "text": "3401 Civic Center Blvd., Philadelphia, PA 19104", - "line": [ - "3401 Civic Center Blvd." - ], - "city": "Philadelphia", - "state": "PA", - "postalCode": "19104" - }, - "gender": "female" - } - ] +{ + "resourceType" : "Patient", + "id" : "patient-example-3", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>John Samuel Smith(OFFICIAL)</b> male, DoB Unknown</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Ways to contact the Patient\">Contact Details:</td><td colspan=\"3\"><ul><li>ph: (555) 555-5555(HOME)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Nominated Contact: Spouse\">Emergency Contact:</td><td colspan=\"3\"><ul><li>Jane Samantha Smith(OFFICIAL) (female)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li><li>ph: (555) 555-5555(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2186-5\">Race & Ethnicity - CDC</a> 2186-5: Not Hispanic or Latino</li><li>text: Not Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race & Ethnicity - CDC</a> 2106-3: White</li><li>detailed: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2113-9\">Race & Ethnicity - CDC</a> 2113-9: Irish</li><li>text: White</li></ul></td></tr></table></div>" + }, + "extension" : [{ + "extension" : [{ + "url" : "ombCategory", + "valueCoding" : { + "system" : "urn:oid:2.16.840.1.113883.6.238", + "code" : "2106-3", + "display" : "White" + } + }, + { + "url" : "detailed", + "valueCoding" : { + "system" : "urn:oid:2.16.840.1.113883.6.238", + "code" : "2113-9", + "display" : "Irish" + } + }, + { + "url" : "text", + "valueString" : "White" + }], + "url" : "http://hl7.org/fhir/us/core/StructureDefinition/us-core-race" + }, + { + "extension" : [{ + "url" : "ombCategory", + "valueCoding" : { + "system" : "urn:oid:2.16.840.1.113883.6.238", + "code" : "2186-5", + "display" : "Not Hispanic or Latino" + } + }, + { + "url" : "text", + "valueString" : "Not Hispanic or Latino" + }], + "url" : "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" + }], + "name" : [{ + "use" : "official", + "text" : "John Samuel Smith", + "family" : "Smith", + "given" : ["Jone", + "Samuel"] + }], + "telecom" : [{ + "system" : "phone", + "value" : "(555) 555-5555", + "use" : "home", + "rank" : 1 + }], + "gender" : "male", + "address" : [{ + "use" : "home", + "type" : "both", + "text" : "3401 Civic Center Blvd., Philadelphia, PA 19104", + "line" : ["3401 Civic Center Blvd."], + "city" : "Philadelphia", + "state" : "PA", + "postalCode" : "19104" + }], + "contact" : [{ + "relationship" : [{ + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/v2-0131", + "code" : "C", + "display" : "Emergency Contact" + }], + "text" : "Spouse" + }], + "name" : { + "use" : "official", + "text" : "Jane Samantha Smith", + "family" : "Smith", + "given" : ["Jane", + "Samantha"] + }, + "telecom" : [{ + "system" : "phone", + "value" : "(555) 555-5555", + "use" : "home", + "rank" : 1 + }], + "address" : { + "use" : "home", + "type" : "both", + "text" : "3401 Civic Center Blvd., Philadelphia, PA 19104", + "line" : ["3401 Civic Center Blvd."], + "city" : "Philadelphia", + "state" : "PA", + "postalCode" : "19104" + }, + "gender" : "female" + }] } \ No newline at end of file diff --git a/Patient-patient-example-3.json.html b/Patient-patient-example-3.json.html index e854a77c..138b3240 100644 --- a/Patient-patient-example-3.json.html +++ b/Patient-patient-example-3.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -442,7 +442,7 @@ <h2 id="root">: patient-example-3 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-patient-example-3.ttl b/Patient-patient-example-3.ttl index 8d876038..00408273 100644 --- a/Patient-patient-example-3.ttl +++ b/Patient-patient-example-3.ttl @@ -7,11 +7,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-3> a fhir:Patient; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "patient-example-3"]; + fhir:Resource.id [ fhir:value "patient-example-3"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>John Samuel Smith(OFFICIAL)</b> male, DoB Unknown</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Ways to contact the Patient\">Contact Details:</td><td colspan=\"3\"><ul><li>ph: (555) 555-5555(HOME)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Nominated Contact: Spouse\">Emergency Contact:</td><td colspan=\"3\"><ul><li>Jane Samantha Smith(OFFICIAL) (female)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li><li>ph: (555) 555-5555(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2186-5\">Race & Ethnicity - CDC</a> 2186-5: Not Hispanic or Latino</li><li>text: Not Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race & Ethnicity - CDC</a> 2106-3: White</li><li>detailed: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2113-9\">Race & Ethnicity - CDC</a> 2113-9: Irish</li><li>text: White</li></ul></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Element.extension [ @@ -52,7 +52,7 @@ fhir:Extension.valueString [ fhir:value "Not Hispanic or Latino" ] ]; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" ] - ]; + ]; # fhir:Patient.name [ fhir:index 0; fhir:HumanName.use [ fhir:value "official" ]; @@ -65,15 +65,15 @@ fhir:value "Samuel"; fhir:index 1 ] - ]; + ]; # fhir:Patient.telecom [ fhir:index 0; fhir:ContactPoint.system [ fhir:value "phone" ]; fhir:ContactPoint.value [ fhir:value "(555) 555-5555" ]; fhir:ContactPoint.use [ fhir:value "home" ]; fhir:ContactPoint.rank [ fhir:value "1"^^xsd:positiveInteger ] - ]; - fhir:Patient.gender [ fhir:value "male"]; + ]; # + fhir:Patient.gender [ fhir:value "male"]; # fhir:Patient.address [ fhir:index 0; fhir:Address.use [ fhir:value "home" ]; @@ -86,7 +86,7 @@ fhir:Address.city [ fhir:value "Philadelphia" ]; fhir:Address.state [ fhir:value "PA" ]; fhir:Address.postalCode [ fhir:value "19104" ] - ]; + ]; # fhir:Patient.contact [ fhir:index 0; fhir:Patient.contact.relationship [ @@ -131,7 +131,7 @@ fhir:Address.postalCode [ fhir:value "19104" ] ]; fhir:Patient.contact.gender [ fhir:value "female" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Patient-patient-example-3.ttl.html b/Patient-patient-example-3.ttl.html index 4a2ca0f7..84fbdf3d 100644 --- a/Patient-patient-example-3.ttl.html +++ b/Patient-patient-example-3.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,11 +292,11 @@ <h2 id="root">: patient-example-3 - TTL Representation</h2> a fhir:Patient; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/patient.html#Patient.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "patient-example-3"]; + <a href="http://hl7.org/fhir/R4/patient.html#Patient.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "patient-example-3"]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\"><b>John Samuel Smith(OFFICIAL)</b> male, DoB Unknown</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Ways to contact the Patient\">Contact Details:</td><td colspan=\"3\"><ul><li>ph: (555) 555-5555(HOME)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Nominated Contact: Spouse\">Emergency Contact:</td><td colspan=\"3\"><ul><li>Jane Samantha Smith(OFFICIAL) (female)</li><li>3401 Civic Center Blvd., Philadelphia, PA 19104(HOME)</li><li>ph: (555) 555-5555(HOME)</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The ethnicity codes used to represent these concepts are based upon the [CDC ethnicity and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 43 reference ethnicity. The ethnicity concepts are grouped by and pre-mapped to the 2 OMB ethnicity categories: - Hispanic or Latino - Not Hispanic or Latino.\">US Core Ethnicity Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2186-5\">Race &amp; Ethnicity - CDC</a> 2186-5: Not Hispanic or Latino</li><li>text: Not Hispanic or Latino</li></ul></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Concepts classifying the person into a named category of humans sharing common history, traits, geographical origin or nationality. The race codes used to represent these concepts are based upon the [CDC Race and Ethnicity Code Set Version 1.0](http://www.cdc.gov/phin/resources/vocabulary/index.html) which includes over 900 concepts for representing race and ethnicity of which 921 reference race. The race concepts are grouped by and pre-mapped to the 5 OMB race categories:\n\n - American Indian or Alaska Native\n - Asian\n - Black or African American\n - Native Hawaiian or Other Pacific Islander\n - White.\">US Core Race Extension:</td><td colspan=\"3\"><ul><li>ombCategory: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2106-3\">Race &amp; Ethnicity - CDC</a> 2106-3: White</li><li>detailed: <a href=\"http://hl7.org/fhir/us/core/STU3.1.1/CodeSystem-cdcrec.html#cdcrec-2113-9\">Race &amp; Ethnicity - CDC</a> 2113-9: Irish</li><li>text: White</li></ul></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.extension">fhir:Element.extension</a> [ @@ -329,7 +329,7 @@ <h2 id="root">: patient-example-3 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "text" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueString</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Not Hispanic or Latino" ] ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.name">fhir:Patient.name</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#HumanName#HumanName.use">fhir:HumanName.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "official" ]; @@ -340,15 +340,15 @@ <h2 id="root">: patient-example-3 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0 ], [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Samuel"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1 ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.telecom">fhir:Patient.telecom</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "phone" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "(555) 555-5555" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "home" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.rank">fhir:ContactPoint.rank</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#positiveInt">fhir:value</a> "1"^^xsd:positiveInteger ] - ]; - <a href="http://hl7.org/fhir/R4/patient.html#Patient.gender">fhir:Patient.gender</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "male"]; + ]; # + <a href="http://hl7.org/fhir/R4/patient.html#Patient.gender">fhir:Patient.gender</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "male"]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.address">fhir:Patient.address</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.use">fhir:Address.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "home" ]; @@ -360,7 +360,7 @@ <h2 id="root">: patient-example-3 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.city">fhir:Address.city</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Philadelphia" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.state">fhir:Address.state</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "PA" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.postalCode">fhir:Address.postalCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "19104" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/patient.html#Patient.contact">fhir:Patient.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/patient.html#Patient.contact.relationship">fhir:Patient.contact.relationship</a> [ @@ -397,7 +397,7 @@ <h2 id="root">: patient-example-3 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.state">fhir:Address.state</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "PA" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.postalCode">fhir:Address.postalCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "19104" ] ]; <a href="http://hl7.org/fhir/R4/patient.html#Patient.contact.gender">fhir:Patient.contact.gender</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "female" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -435,7 +435,7 @@ <h2 id="root">: patient-example-3 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Patient-patient-example-3.xml.html b/Patient-patient-example-3.xml.html index ef152e6b..44aa56e0 100644 --- a/Patient-patient-example-3.xml.html +++ b/Patient-patient-example-3.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -415,7 +415,7 @@ <h2 id="root">: patient-example-3 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Practitioner-practitioner-example-1.change.history.html b/Practitioner-practitioner-example-1.change.history.html index 8d909917..8a8156f0 100644 --- a/Practitioner-practitioner-example-1.change.history.html +++ b/Practitioner-practitioner-example-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Practitioner/practitioner-example-1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Practitioner-practitioner-example-1.html b/Practitioner-practitioner-example-1.html index 1517c4b0..1b5983e8 100644 --- a/Practitioner-practitioner-example-1.html +++ b/Practitioner-practitioner-example-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Practitioner: practitioner-example-1</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Practitioner-practitioner-example-1.json b/Practitioner-practitioner-example-1.json index 18280004..657153ca 100644 --- a/Practitioner-practitioner-example-1.json +++ b/Practitioner-practitioner-example-1.json @@ -1,42 +1,32 @@ -{ - "resourceType": "Practitioner", - "id": "practitioner-example-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Practitioner</b><a name=\"practitioner-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Practitioner "practitioner-example-1" </p></div><p><b>active</b>: true</p><p><b>name</b>: Jane Samantha Smith(OFFICIAL)</p><p><b>telecom</b>: ph: (555) 555-5555(WORK)</p><p><b>address</b>: 3401 Civic Center Blvd., Philadelphia, PA 19104(WORK)</p><p><b>gender</b>: female</p></div>" - }, - "active": true, - "name": [ - { - "use": "official", - "text": "Jane Samantha Smith", - "family": "Smith", - "given": [ - "Jane", - "Samantha" - ] - } - ], - "telecom": [ - { - "system": "phone", - "value": "(555) 555-5555", - "use": "work", - "rank": 1 - } - ], - "address": [ - { - "use": "work", - "type": "both", - "text": "3401 Civic Center Blvd., Philadelphia, PA 19104", - "line": [ - "3401 Civic Center Blvd." - ], - "city": "Philadelphia", - "state": "PA", - "postalCode": "19104" - } - ], - "gender": "female" +{ + "resourceType" : "Practitioner", + "id" : "practitioner-example-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Practitioner</b><a name=\"practitioner-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Practitioner "practitioner-example-1" </p></div><p><b>active</b>: true</p><p><b>name</b>: Jane Samantha Smith(OFFICIAL)</p><p><b>telecom</b>: ph: (555) 555-5555(WORK)</p><p><b>address</b>: 3401 Civic Center Blvd., Philadelphia, PA 19104(WORK)</p><p><b>gender</b>: female</p></div>" + }, + "active" : true, + "name" : [{ + "use" : "official", + "text" : "Jane Samantha Smith", + "family" : "Smith", + "given" : ["Jane", + "Samantha"] + }], + "telecom" : [{ + "system" : "phone", + "value" : "(555) 555-5555", + "use" : "work", + "rank" : 1 + }], + "address" : [{ + "use" : "work", + "type" : "both", + "text" : "3401 Civic Center Blvd., Philadelphia, PA 19104", + "line" : ["3401 Civic Center Blvd."], + "city" : "Philadelphia", + "state" : "PA", + "postalCode" : "19104" + }], + "gender" : "female" } \ No newline at end of file diff --git a/Practitioner-practitioner-example-1.json.html b/Practitioner-practitioner-example-1.json.html index fa8aca8c..a86f188c 100644 --- a/Practitioner-practitioner-example-1.json.html +++ b/Practitioner-practitioner-example-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -354,7 +354,7 @@ <h2 id="root">: practitioner-example-1 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Practitioner-practitioner-example-1.ttl b/Practitioner-practitioner-example-1.ttl index 160acf9a..a878bf0c 100644 --- a/Practitioner-practitioner-example-1.ttl +++ b/Practitioner-practitioner-example-1.ttl @@ -7,12 +7,12 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Practitioner/practitioner-example-1> a fhir:Practitioner; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "practitioner-example-1"]; + fhir:Resource.id [ fhir:value "practitioner-example-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Practitioner</b><a name=\"practitioner-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Practitioner "practitioner-example-1" </p></div><p><b>active</b>: true</p><p><b>name</b>: Jane Samantha Smith(OFFICIAL)</p><p><b>telecom</b>: ph: (555) 555-5555(WORK)</p><p><b>address</b>: 3401 Civic Center Blvd., Philadelphia, PA 19104(WORK)</p><p><b>gender</b>: female</p></div>" - ]; - fhir:Practitioner.active [ fhir:value "true"^^xsd:boolean]; + ]; # + fhir:Practitioner.active [ fhir:value "true"^^xsd:boolean]; # fhir:Practitioner.name [ fhir:index 0; fhir:HumanName.use [ fhir:value "official" ]; @@ -25,14 +25,14 @@ fhir:value "Samantha"; fhir:index 1 ] - ]; + ]; # fhir:Practitioner.telecom [ fhir:index 0; fhir:ContactPoint.system [ fhir:value "phone" ]; fhir:ContactPoint.value [ fhir:value "(555) 555-5555" ]; fhir:ContactPoint.use [ fhir:value "work" ]; fhir:ContactPoint.rank [ fhir:value "1"^^xsd:positiveInteger ] - ]; + ]; # fhir:Practitioner.address [ fhir:index 0; fhir:Address.use [ fhir:value "work" ]; @@ -45,8 +45,8 @@ fhir:Address.city [ fhir:value "Philadelphia" ]; fhir:Address.state [ fhir:value "PA" ]; fhir:Address.postalCode [ fhir:value "19104" ] - ]; - fhir:Practitioner.gender [ fhir:value "female"] . + ]; # + fhir:Practitioner.gender [ fhir:value "female"] . # # - ontology header ------------------------------------------------------------ diff --git a/Practitioner-practitioner-example-1.ttl.html b/Practitioner-practitioner-example-1.ttl.html index f9e3b6b1..719e3903 100644 --- a/Practitioner-practitioner-example-1.ttl.html +++ b/Practitioner-practitioner-example-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,12 +292,12 @@ <h2 id="root">: practitioner-example-1 - TTL Representation</h2> a fhir:Practitioner; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/practitioner.html#Practitioner.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "practitioner-example-1"]; + <a href="http://hl7.org/fhir/R4/practitioner.html#Practitioner.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "practitioner-example-1"]; # <a href="http://hl7.org/fhir/R4/practitioner.html#Practitioner.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Practitioner</b><a name=\"practitioner-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Practitioner &quot;practitioner-example-1&quot; </p></div><p><b>active</b>: true</p><p><b>name</b>: Jane Samantha Smith(OFFICIAL)</p><p><b>telecom</b>: ph: (555) 555-5555(WORK)</p><p><b>address</b>: 3401 Civic Center Blvd., Philadelphia, PA 19104(WORK)</p><p><b>gender</b>: female</p></div>" - ]; - <a href="http://hl7.org/fhir/R4/practitioner.html#Practitioner.active">fhir:Practitioner.active</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; + ]; # + <a href="http://hl7.org/fhir/R4/practitioner.html#Practitioner.active">fhir:Practitioner.active</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; # <a href="http://hl7.org/fhir/R4/practitioner.html#Practitioner.name">fhir:Practitioner.name</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#HumanName#HumanName.use">fhir:HumanName.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "official" ]; @@ -308,14 +308,14 @@ <h2 id="root">: practitioner-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0 ], [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Samantha"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1 ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/practitioner.html#Practitioner.telecom">fhir:Practitioner.telecom</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "phone" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "(555) 555-5555" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.rank">fhir:ContactPoint.rank</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#positiveInt">fhir:value</a> "1"^^xsd:positiveInteger ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/practitioner.html#Practitioner.address">fhir:Practitioner.address</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.use">fhir:Address.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ]; @@ -327,8 +327,8 @@ <h2 id="root">: practitioner-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.city">fhir:Address.city</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Philadelphia" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.state">fhir:Address.state</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "PA" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Address#Address.postalCode">fhir:Address.postalCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "19104" ] - ]; - <a href="http://hl7.org/fhir/R4/practitioner.html#Practitioner.gender">fhir:Practitioner.gender</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "female"]. + ]; # + <a href="http://hl7.org/fhir/R4/practitioner.html#Practitioner.gender">fhir:Practitioner.gender</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "female"]. # # - ontology header ------------------------------------------------------------ @@ -366,7 +366,7 @@ <h2 id="root">: practitioner-example-1 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Practitioner-practitioner-example-1.xml.html b/Practitioner-practitioner-example-1.xml.html index 7877228f..e4aaeefd 100644 --- a/Practitioner-practitioner-example-1.xml.html +++ b/Practitioner-practitioner-example-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -344,7 +344,7 @@ <h2 id="root">: practitioner-example-1 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/PractitionerRole-practitioner-role-example-1.change.history.html b/PractitionerRole-practitioner-role-example-1.change.history.html index ae490e3a..72d9d088 100644 --- a/PractitionerRole-practitioner-role-example-1.change.history.html +++ b/PractitionerRole-practitioner-role-example-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: PractitionerRole/practitioner-role-example-1 - Change History</h <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/PractitionerRole-practitioner-role-example-1.html b/PractitionerRole-practitioner-role-example-1.html index 28cb616c..aa74b404 100644 --- a/PractitionerRole-practitioner-role-example-1.html +++ b/PractitionerRole-practitioner-role-example-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example PractitionerRole: practitioner-role-example-1</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/PractitionerRole-practitioner-role-example-1.json b/PractitionerRole-practitioner-role-example-1.json index 74841bf5..58225860 100644 --- a/PractitionerRole-practitioner-role-example-1.json +++ b/PractitionerRole-practitioner-role-example-1.json @@ -1,35 +1,29 @@ -{ - "resourceType": "PractitionerRole", - "id": "practitioner-role-example-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: PractitionerRole</b><a name=\"practitioner-role-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource PractitionerRole "practitioner-role-example-1" </p></div><p><b>active</b>: true</p><p><b>practitioner</b>: <a href=\"Practitioner-practitioner-example-1.html\">Practitioner/practitioner-example-1</a> " SMITH"</p><p><b>organization</b>: <a href=\"Organization-organization-example-1.html\">Organization/organization-example-1</a> "Amazing Children's Hospital"</p><p><b>code</b>: Principal Investigator <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-practitioner-role.html\">Practitioner role</a>#researcher "Researcher")</span></p><p><b>telecom</b>: ph: (555) 555-5555(WORK)</p></div>" - }, - "active": true, - "practitioner": { - "reference": "Practitioner/practitioner-example-1" - }, - "organization": { - "reference": "Organization/organization-example-1" - }, - "code": [ - { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/practitioner-role", - "code": "researcher", - "display": "Researcher" - } - ], - "text": "Principal Investigator" - } - ], - "telecom": [ - { - "system": "phone", - "value": "(555) 555-5555", - "use": "work", - "rank": 1 - } - ] +{ + "resourceType" : "PractitionerRole", + "id" : "practitioner-role-example-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: PractitionerRole</b><a name=\"practitioner-role-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource PractitionerRole "practitioner-role-example-1" </p></div><p><b>active</b>: true</p><p><b>practitioner</b>: <a href=\"Practitioner-practitioner-example-1.html\">Practitioner/practitioner-example-1</a> " SMITH"</p><p><b>organization</b>: <a href=\"Organization-organization-example-1.html\">Organization/organization-example-1</a> "Amazing Children's Hospital"</p><p><b>code</b>: Principal Investigator <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-practitioner-role.html\">Practitioner role</a>#researcher "Researcher")</span></p><p><b>telecom</b>: ph: (555) 555-5555(WORK)</p></div>" + }, + "active" : true, + "practitioner" : { + "reference" : "Practitioner/practitioner-example-1" + }, + "organization" : { + "reference" : "Organization/organization-example-1" + }, + "code" : [{ + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/practitioner-role", + "code" : "researcher", + "display" : "Researcher" + }], + "text" : "Principal Investigator" + }], + "telecom" : [{ + "system" : "phone", + "value" : "(555) 555-5555", + "use" : "work", + "rank" : 1 + }] } \ No newline at end of file diff --git a/PractitionerRole-practitioner-role-example-1.json.html b/PractitionerRole-practitioner-role-example-1.json.html index 7ad11dfd..1549e9cc 100644 --- a/PractitionerRole-practitioner-role-example-1.json.html +++ b/PractitionerRole-practitioner-role-example-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -347,7 +347,7 @@ <h2 id="root">: practitioner-role-example-1 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/PractitionerRole-practitioner-role-example-1.ttl b/PractitionerRole-practitioner-role-example-1.ttl index 53a15582..59ce8cbd 100644 --- a/PractitionerRole-practitioner-role-example-1.ttl +++ b/PractitionerRole-practitioner-role-example-1.ttl @@ -7,20 +7,20 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/PractitionerRole/practitioner-role-example-1> a fhir:PractitionerRole; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "practitioner-role-example-1"]; + fhir:Resource.id [ fhir:value "practitioner-role-example-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: PractitionerRole</b><a name=\"practitioner-role-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource PractitionerRole "practitioner-role-example-1" </p></div><p><b>active</b>: true</p><p><b>practitioner</b>: <a href=\"Practitioner-practitioner-example-1.html\">Practitioner/practitioner-example-1</a> " SMITH"</p><p><b>organization</b>: <a href=\"Organization-organization-example-1.html\">Organization/organization-example-1</a> "Amazing Children's Hospital"</p><p><b>code</b>: Principal Investigator <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-practitioner-role.html\">Practitioner role</a>#researcher "Researcher")</span></p><p><b>telecom</b>: ph: (555) 555-5555(WORK)</p></div>" - ]; - fhir:PractitionerRole.active [ fhir:value "true"^^xsd:boolean]; + ]; # + fhir:PractitionerRole.active [ fhir:value "true"^^xsd:boolean]; # fhir:PractitionerRole.practitioner [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Practitioner/practitioner-example-1>; fhir:Reference.reference [ fhir:value "Practitioner/practitioner-example-1" ] - ]; + ]; # fhir:PractitionerRole.organization [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Organization/organization-example-1>; fhir:Reference.reference [ fhir:value "Organization/organization-example-1" ] - ]; + ]; # fhir:PractitionerRole.code [ fhir:index 0; fhir:CodeableConcept.coding [ @@ -30,14 +30,14 @@ fhir:Coding.display [ fhir:value "Researcher" ] ]; fhir:CodeableConcept.text [ fhir:value "Principal Investigator" ] - ]; + ]; # fhir:PractitionerRole.telecom [ fhir:index 0; fhir:ContactPoint.system [ fhir:value "phone" ]; fhir:ContactPoint.value [ fhir:value "(555) 555-5555" ]; fhir:ContactPoint.use [ fhir:value "work" ]; fhir:ContactPoint.rank [ fhir:value "1"^^xsd:positiveInteger ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/PractitionerRole-practitioner-role-example-1.ttl.html b/PractitionerRole-practitioner-role-example-1.ttl.html index 36d85bae..981745e6 100644 --- a/PractitionerRole-practitioner-role-example-1.ttl.html +++ b/PractitionerRole-practitioner-role-example-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,18 +292,18 @@ <h2 id="root">: practitioner-role-example-1 - TTL Representation</h2> a fhir:PractitionerRole; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/practitionerrole.html#PractitionerRole.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "practitioner-role-example-1"]; + <a href="http://hl7.org/fhir/R4/practitionerrole.html#PractitionerRole.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "practitioner-role-example-1"]; # <a href="http://hl7.org/fhir/R4/practitionerrole.html#PractitionerRole.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: PractitionerRole</b><a name=\"practitioner-role-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource PractitionerRole &quot;practitioner-role-example-1&quot; </p></div><p><b>active</b>: true</p><p><b>practitioner</b>: <a href=\"Practitioner-practitioner-example-1.html\">Practitioner/practitioner-example-1</a> &quot; SMITH&quot;</p><p><b>organization</b>: <a href=\"Organization-organization-example-1.html\">Organization/organization-example-1</a> &quot;Amazing Children's Hospital&quot;</p><p><b>code</b>: Principal Investigator <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-practitioner-role.html\">Practitioner role</a>#researcher &quot;Researcher&quot;)</span></p><p><b>telecom</b>: ph: (555) 555-5555(WORK)</p></div>" - ]; - <a href="http://hl7.org/fhir/R4/practitionerrole.html#PractitionerRole.active">fhir:PractitionerRole.active</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; + ]; # + <a href="http://hl7.org/fhir/R4/practitionerrole.html#PractitionerRole.active">fhir:PractitionerRole.active</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "true"^^xsd:boolean]; # <a href="http://hl7.org/fhir/R4/practitionerrole.html#PractitionerRole.practitioner">fhir:PractitionerRole.practitioner</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Practitioner/practitioner-example-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/practitionerrole.html#PractitionerRole.organization">fhir:PractitionerRole.organization</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Organization/organization-example-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/practitionerrole.html#PractitionerRole.code">fhir:PractitionerRole.code</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ @@ -312,14 +312,14 @@ <h2 id="root">: practitioner-role-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "researcher" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Researcher" ] ]; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.text">fhir:CodeableConcept.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Principal Investigator" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/practitionerrole.html#PractitionerRole.telecom">fhir:PractitionerRole.telecom</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "phone" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "(555) 555-5555" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.rank">fhir:ContactPoint.rank</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#positiveInt">fhir:value</a> "1"^^xsd:positiveInteger ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -357,7 +357,7 @@ <h2 id="root">: practitioner-role-example-1 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/PractitionerRole-practitioner-role-example-1.xml.html b/PractitionerRole-practitioner-role-example-1.xml.html index d58b4225..0cf8d2f7 100644 --- a/PractitionerRole-practitioner-role-example-1.xml.html +++ b/PractitionerRole-practitioner-role-example-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -342,7 +342,7 @@ <h2 id="root">: practitioner-role-example-1 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Questionnaire-example-questionnaire-demographics-1-testing.html b/Questionnaire-example-questionnaire-demographics-1-testing.html index a13803d9..1b4b2c6d 100644 --- a/Questionnaire-example-questionnaire-demographics-1-testing.html +++ b/Questionnaire-example-questionnaire-demographics-1-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">Questionnaire: Example of a Questionnaire to Represent Raw Data - Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">Questionnaire: Example of a Questionnaire to Represent Raw Data - <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Questionnaire-example-questionnaire-demographics-1.change.history.html b/Questionnaire-example-questionnaire-demographics-1.change.history.html index 692bdf54..f336162b 100644 --- a/Questionnaire-example-questionnaire-demographics-1.change.history.html +++ b/Questionnaire-example-questionnaire-demographics-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Demographcs - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Questionnaire-example-questionnaire-demographics-1.html b/Questionnaire-example-questionnaire-demographics-1.html index 8a082ce8..3fbd8ff3 100644 --- a/Questionnaire-example-questionnaire-demographics-1.html +++ b/Questionnaire-example-questionnaire-demographics-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -282,7 +282,7 @@ <h2 id="root">Questionnaire: Example of a Questionnaire to Represent Raw Data Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -368,7 +368,7 @@ <h3>Notes:</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Questionnaire-example-questionnaire-demographics-1.json b/Questionnaire-example-questionnaire-demographics-1.json index 0d6137c9..bc2f4ab6 100644 --- a/Questionnaire-example-questionnaire-demographics-1.json +++ b/Questionnaire-example-questionnaire-demographics-1.json @@ -1,106 +1,84 @@ -{ - "resourceType": "Questionnaire", - "id": "example-questionnaire-demographics-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"1\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 2px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"The linkId for the item\">LinkId</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Text for the item\">Text</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Minimum and Maximum # of times the the itemcan appear in the instance\">Cardinality</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"The type of the item\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Additional information about the item\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_q_root.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"QuestionnaireRoot\" class=\"hierarchy\"/> Demographcs</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Questionnaire</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics#0.2.0</td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" id=\"item.subjectid\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"String\" class=\"hierarchy\"/> subjectid</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject ID</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" id=\"item.gender\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-coding.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Coding\" class=\"hierarchy\"/> gender</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Gender</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-choice\">choice</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Value Set: <a href=\"http://hl7.org/fhir/R4/valueset-administrative-gender.html\">AdministrativeGender</a></td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" id=\"item.age_at_enrollment\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-integer.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Integer\" class=\"hierarchy\"/> age_at_enrollment</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's Age at Enrollment in days</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">0..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-integer\">integer</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" id=\"item.bmi\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-quantity.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Quantity\" class=\"hierarchy\"/> bmi</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's BMI, Measured at Enrollment</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">0..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-quantity\">quantity</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" id=\"item.status\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-coding.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Coding\" class=\"hierarchy\"/> status</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's status (Case or Control)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">0..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-choice\">choice</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Value Set: <a href=\"ValueSet-example-study-data-dictionary-case-control-vs-1.html\">Case/Control Vars for 'status' categoricals</a></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - }, - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics", - "version": "0.2.0", - "name": "Demographcs", - "title": "Example Demographics", - "status": "active", - "subjectType": [ - "ResearchSubject" - ], - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "code": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1", - "code": "demographics" - } - ], - "item": [ - { - "linkId": "subjectid", - "code": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "code": "subjectid" - } - ], - "text": "Subject ID", - "type": "string", - "required": true - }, - { - "linkId": "gender", - "code": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "code": "gender" - } - ], - "text": "Gender", - "type": "choice", - "required": true, - "answerValueSet": "http://hl7.org/fhir/ValueSet/administrative-gender" - }, - { - "linkId": "age_at_enrollment", - "code": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "code": "age_at_enrollment" - } - ], - "text": "Subject's Age at Enrollment in days", - "type": "integer" - }, - { - "linkId": "bmi", - "code": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "code": "bmi" - } - ], - "text": "Subject's BMI, Measured at Enrollment", - "type": "quantity" - }, - { - "linkId": "status", - "code": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "code": "status" - } - ], - "text": "Subject's status (Case or Control)", - "type": "choice", - "answerValueSet": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1" - } - ] +{ + "resourceType" : "Questionnaire", + "id" : "example-questionnaire-demographics-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"1\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 2px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"The linkId for the item\">LinkId</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Text for the item\">Text</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Minimum and Maximum # of times the the itemcan appear in the instance\">Cardinality</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"The type of the item\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Additional information about the item\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_q_root.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"QuestionnaireRoot\" class=\"hierarchy\"/> Demographcs</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Questionnaire</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics#0.2.0</td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" id=\"item.subjectid\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"String\" class=\"hierarchy\"/> subjectid</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject ID</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" id=\"item.gender\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-coding.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Coding\" class=\"hierarchy\"/> gender</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Gender</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-choice\">choice</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Value Set: <a href=\"http://hl7.org/fhir/R4/valueset-administrative-gender.html\">AdministrativeGender</a></td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" id=\"item.age_at_enrollment\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-integer.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Integer\" class=\"hierarchy\"/> age_at_enrollment</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's Age at Enrollment in days</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">0..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-integer\">integer</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" id=\"item.bmi\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-quantity.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Quantity\" class=\"hierarchy\"/> bmi</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's BMI, Measured at Enrollment</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">0..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-quantity\">quantity</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" id=\"item.status\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-coding.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Coding\" class=\"hierarchy\"/> status</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's status (Case or Control)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">0..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-choice\">choice</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Value Set: <a href=\"ValueSet-example-study-data-dictionary-case-control-vs-1.html\">Case/Control Vars for 'status' categoricals</a></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" + }, + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics", + "version" : "0.2.0", + "name" : "Demographcs", + "title" : "Example Demographics", + "status" : "active", + "subjectType" : ["ResearchSubject"], + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "code" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1", + "code" : "demographics" + }], + "item" : [{ + "linkId" : "subjectid", + "code" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "code" : "subjectid" + }], + "text" : "Subject ID", + "type" : "string", + "required" : true + }, + { + "linkId" : "gender", + "code" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "code" : "gender" + }], + "text" : "Gender", + "type" : "choice", + "required" : true, + "answerValueSet" : "http://hl7.org/fhir/ValueSet/administrative-gender" + }, + { + "linkId" : "age_at_enrollment", + "code" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "code" : "age_at_enrollment" + }], + "text" : "Subject's Age at Enrollment in days", + "type" : "integer" + }, + { + "linkId" : "bmi", + "code" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "code" : "bmi" + }], + "text" : "Subject's BMI, Measured at Enrollment", + "type" : "quantity" + }, + { + "linkId" : "status", + "code" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "code" : "status" + }], + "text" : "Subject's status (Case or Control)", + "type" : "choice", + "answerValueSet" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1" + }] } \ No newline at end of file diff --git a/Questionnaire-example-questionnaire-demographics-1.json.html b/Questionnaire-example-questionnaire-demographics-1.json.html index 07116d1d..94cd7398 100644 --- a/Questionnaire-example-questionnaire-demographics-1.json.html +++ b/Questionnaire-example-questionnaire-demographics-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Example of a Questionnaire to Represent Raw Data - JSON Represen Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -300,7 +300,7 @@ <h2 id="root">: Example of a Questionnaire to Represent Raw Data - JSON Represen "<a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.subjectType">subjectType</a>" : [ "ResearchSubject" ], - "<a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.contact">contact</a>" : [ { @@ -420,7 +420,7 @@ <h2 id="root">: Example of a Questionnaire to Represent Raw Data - JSON Represen <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Questionnaire-example-questionnaire-demographics-1.ttl b/Questionnaire-example-questionnaire-demographics-1.ttl index 1a98dc72..aee5cdd4 100644 --- a/Questionnaire-example-questionnaire-demographics-1.ttl +++ b/Questionnaire-example-questionnaire-demographics-1.ttl @@ -7,22 +7,22 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Questionnaire/example-questionnaire-demographics-1> a fhir:Questionnaire; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "example-questionnaire-demographics-1"]; + fhir:Resource.id [ fhir:value "example-questionnaire-demographics-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"1\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 2px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"The linkId for the item\">LinkId</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Text for the item\">Text</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Minimum and Maximum # of times the the itemcan appear in the instance\">Cardinality</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"The type of the item\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Additional information about the item\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_q_root.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"QuestionnaireRoot\" class=\"hierarchy\"/> Demographcs</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Questionnaire</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics#0.2.0</td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" id=\"item.subjectid\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"String\" class=\"hierarchy\"/> subjectid</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject ID</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" id=\"item.gender\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-coding.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Coding\" class=\"hierarchy\"/> gender</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Gender</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-choice\">choice</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Value Set: <a href=\"http://hl7.org/fhir/R4/valueset-administrative-gender.html\">AdministrativeGender</a></td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" id=\"item.age_at_enrollment\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-integer.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Integer\" class=\"hierarchy\"/> age_at_enrollment</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's Age at Enrollment in days</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">0..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-integer\">integer</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" id=\"item.bmi\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-quantity.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Quantity\" class=\"hierarchy\"/> bmi</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's BMI, Measured at Enrollment</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">0..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-quantity\">quantity</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" id=\"item.status\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-coding.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Coding\" class=\"hierarchy\"/> status</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's status (Case or Control)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">0..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-choice\">choice</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Value Set: <a href=\"ValueSet-example-study-data-dictionary-case-control-vs-1.html\">Case/Control Vars for 'status' categoricals</a></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; - fhir:Questionnaire.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics"]; - fhir:Questionnaire.version [ fhir:value "0.2.0"]; - fhir:Questionnaire.name [ fhir:value "Demographcs"]; - fhir:Questionnaire.title [ fhir:value "Example Demographics"]; - fhir:Questionnaire.status [ fhir:value "active"]; + ]; # + fhir:Questionnaire.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics"]; # + fhir:Questionnaire.version [ fhir:value "0.2.0"]; # + fhir:Questionnaire.name [ fhir:value "Demographcs"]; # + fhir:Questionnaire.title [ fhir:value "Example Demographics"]; # + fhir:Questionnaire.status [ fhir:value "active"]; # fhir:Questionnaire.subjectType [ fhir:value "ResearchSubject"; fhir:index 0 - ]; - fhir:Questionnaire.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:Questionnaire.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:Questionnaire.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:Questionnaire.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:Questionnaire.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -40,12 +40,12 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; + ]; # fhir:Questionnaire.code [ fhir:index 0; fhir:Coding.system [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1" ]; fhir:Coding.code [ fhir:value "demographics" ] - ]; + ]; # fhir:Questionnaire.item [ fhir:index 0; fhir:Questionnaire.item.linkId [ fhir:value "subjectid" ]; @@ -106,7 +106,7 @@ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1"; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1> ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Questionnaire-example-questionnaire-demographics-1.ttl.html b/Questionnaire-example-questionnaire-demographics-1.ttl.html index a393f97c..74d7be96 100644 --- a/Questionnaire-example-questionnaire-demographics-1.ttl.html +++ b/Questionnaire-example-questionnaire-demographics-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Example of a Questionnaire to Represent Raw Data - TTL Represent Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,22 +294,22 @@ <h2 id="root">: Example of a Questionnaire to Represent Raw Data - TTL Represent a fhir:Questionnaire; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "example-questionnaire-demographics-1"]; + <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "example-questionnaire-demographics-1"]; # <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"1\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 2px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"The linkId for the item\">LinkId</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Text for the item\">Text</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Minimum and Maximum # of times the the itemcan appear in the instance\">Cardinality</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"The type of the item\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Additional information about the item\">Description &amp; Constraints</a><span style=\"float: right\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_q_root.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"QuestionnaireRoot\" class=\"hierarchy\"/> Demographcs</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Questionnaire</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics#0.2.0</td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" id=\"item.subjectid\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"String\" class=\"hierarchy\"/> subjectid</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject ID</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" id=\"item.gender\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-coding.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Coding\" class=\"hierarchy\"/> gender</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Gender</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-choice\">choice</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Value Set: <a href=\"http://hl7.org/fhir/R4/valueset-administrative-gender.html\">AdministrativeGender</a></td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" id=\"item.age_at_enrollment\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-integer.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Integer\" class=\"hierarchy\"/> age_at_enrollment</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's Age at Enrollment in days</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">0..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-integer\">integer</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" id=\"item.bmi\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-quantity.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Quantity\" class=\"hierarchy\"/> bmi</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's BMI, Measured at Enrollment</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">0..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-quantity\">quantity</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" id=\"item.status\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-coding.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Coding\" class=\"hierarchy\"/> status</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's status (Case or Control)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">0..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/codesystem-item-type.html#item-type-choice\">choice</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Value Set: <a href=\"ValueSet-example-study-data-dictionary-case-control-vs-1.html\">Case/Control Vars for 'status' categoricals</a></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; - <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.url">fhir:Questionnaire.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics"]; - <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.version">fhir:Questionnaire.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.name">fhir:Questionnaire.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Demographcs"]; - <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.title">fhir:Questionnaire.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Example Demographics"]; - <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.status">fhir:Questionnaire.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; + ]; # + <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.url">fhir:Questionnaire.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics"]; # + <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.version">fhir:Questionnaire.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.name">fhir:Questionnaire.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Demographcs"]; # + <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.title">fhir:Questionnaire.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Example Demographics"]; # + <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.status">fhir:Questionnaire.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; # <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.subjectType">fhir:Questionnaire.subjectType</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "ResearchSubject"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0 - ]; - <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.date">fhir:Questionnaire.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.publisher">fhir:Questionnaire.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.date">fhir:Questionnaire.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.publisher">fhir:Questionnaire.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.contact">fhir:Questionnaire.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -325,12 +325,12 @@ <h2 id="root">: Example of a Questionnaire to Represent Raw Data - TTL Represent <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.code">fhir:Questionnaire.code</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "demographics" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.item">fhir:Questionnaire.item</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.item.linkId">fhir:Questionnaire.item.linkId</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "subjectid" ]; @@ -384,7 +384,7 @@ <h2 id="root">: Example of a Questionnaire to Represent Raw Data - TTL Represent <a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.item.answerValueSet">fhir:Questionnaire.item.answerValueSet</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1> ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -422,7 +422,7 @@ <h2 id="root">: Example of a Questionnaire to Represent Raw Data - TTL Represent <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Questionnaire-example-questionnaire-demographics-1.xml b/Questionnaire-example-questionnaire-demographics-1.xml index 74dc8a9e..1b596075 100644 --- a/Questionnaire-example-questionnaire-demographics-1.xml +++ b/Questionnaire-example-questionnaire-demographics-1.xml @@ -17,7 +17,7 @@ <title value="Example Demographics"/> <status value="active"/> <subjectType value="ResearchSubject"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/Questionnaire-example-questionnaire-demographics-1.xml.html b/Questionnaire-example-questionnaire-demographics-1.xml.html index cd01087c..84b332ea 100644 --- a/Questionnaire-example-questionnaire-demographics-1.xml.html +++ b/Questionnaire-example-questionnaire-demographics-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Example of a Questionnaire to Represent Raw Data - XML Represent Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -305,7 +305,7 @@ <h2 id="root">: Example of a Questionnaire to Represent Raw Data - XML Represent <<a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Example Demographics"/> <<a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="active"/> <<a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.subjectType">subjectType</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="ResearchSubject"/> - <<a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/questionnaire.html#Questionnaire.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -413,7 +413,7 @@ <h2 id="root">: Example of a Questionnaire to Represent Raw Data - XML Represent <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/QuestionnaireResponse-example-questionnaire-demographics-response-1.change.history.html b/QuestionnaireResponse-example-questionnaire-demographics-response-1.change.history.html index 6b200b53..b6f8f7d0 100644 --- a/QuestionnaireResponse-example-questionnaire-demographics-response-1.change.history.html +++ b/QuestionnaireResponse-example-questionnaire-demographics-response-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: QuestionnaireResponse/example-questionnaire-demographics-respons <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/QuestionnaireResponse-example-questionnaire-demographics-response-1.html b/QuestionnaireResponse-example-questionnaire-demographics-response-1.html index 5e640bc4..9c5c7cbb 100644 --- a/QuestionnaireResponse-example-questionnaire-demographics-response-1.html +++ b/QuestionnaireResponse-example-questionnaire-demographics-response-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -335,7 +335,7 @@ <h3>Notes:</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/QuestionnaireResponse-example-questionnaire-demographics-response-1.json b/QuestionnaireResponse-example-questionnaire-demographics-response-1.json index fbcd8218..4152c984 100644 --- a/QuestionnaireResponse-example-questionnaire-demographics-response-1.json +++ b/QuestionnaireResponse-example-questionnaire-demographics-response-1.json @@ -1,60 +1,50 @@ -{ - "resourceType": "QuestionnaireResponse", - "id": "example-questionnaire-demographics-response-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"1\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 2px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"The linkId for the item\">LinkId</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Text for the item\">Text</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Minimum and Maximum # of times the the itemcan appear in the instance\">Definition</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"The type of the item\">Answer</a><span style=\"float: right\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_q_root.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"QuestionnaireResponseRoot\" class=\"hierarchy\"/> example-questionnaire-demographics-response-1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">QuestionnaireResponse</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"></td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Item\" class=\"hierarchy\"/> subjectid</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject ID</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">SUB0001</td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Item\" class=\"hierarchy\"/> gender</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Gender</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Female</td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Item\" class=\"hierarchy\"/> bmi</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's BMI, Measured at Enrollment</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span><span>34.1 kg/m2</span></span></td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Item\" class=\"hierarchy\"/> status</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's status (Case or Control)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span><span>https://uts.nlm.nih.gov/uts/umls C99269: Case</span></span></td></tr>\r\n<tr><td colspan=\"4\" class=\"hierarchy\"><br/><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - }, - "questionnaire": "https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics", - "status": "completed", - "subject": { - "reference": "example-sum-patient-1" - }, - "item": [ - { - "linkId": "subjectid", - "text": "Subject ID", - "answer": [ - { - "valueString": "SUB0001" - } - ] - }, - { - "linkId": "gender", - "text": "Gender", - "answer": [ - { - "valueString": "Female" - } - ] - }, - { - "linkId": "bmi", - "text": "Subject's BMI, Measured at Enrollment", - "answer": [ - { - "valueQuantity": { - "value": 34.1, - "unit": "kg/m2", - "system": "http://unitsofmeasure.org", - "code": "kg/m2" - } - } - ] - }, - { - "linkId": "status", - "text": "Subject's status (Case or Control)", - "answer": [ - { - "valueCoding": { - "system": "https://uts.nlm.nih.gov/uts/umls", - "code": "C99269", - "display": "Case" - } - } - ] - } - ] +{ + "resourceType" : "QuestionnaireResponse", + "id" : "example-questionnaire-demographics-response-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"1\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 2px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"The linkId for the item\">LinkId</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Text for the item\">Text</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Minimum and Maximum # of times the the itemcan appear in the instance\">Definition</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"The type of the item\">Answer</a><span style=\"float: right\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_q_root.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"QuestionnaireResponseRoot\" class=\"hierarchy\"/> example-questionnaire-demographics-response-1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">QuestionnaireResponse</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"></td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Item\" class=\"hierarchy\"/> subjectid</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject ID</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">SUB0001</td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Item\" class=\"hierarchy\"/> gender</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Gender</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Female</td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Item\" class=\"hierarchy\"/> bmi</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's BMI, Measured at Enrollment</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span><span>34.1 kg/m2</span></span></td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Item\" class=\"hierarchy\"/> status</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's status (Case or Control)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span><span>https://uts.nlm.nih.gov/uts/umls C99269: Case</span></span></td></tr>\r\n<tr><td colspan=\"4\" class=\"hierarchy\"><br/><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" + }, + "questionnaire" : "https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics", + "status" : "completed", + "subject" : { + "reference" : "example-sum-patient-1" + }, + "item" : [{ + "linkId" : "subjectid", + "text" : "Subject ID", + "answer" : [{ + "valueString" : "SUB0001" + }] + }, + { + "linkId" : "gender", + "text" : "Gender", + "answer" : [{ + "valueString" : "Female" + }] + }, + { + "linkId" : "bmi", + "text" : "Subject's BMI, Measured at Enrollment", + "answer" : [{ + "valueQuantity" : { + "value" : 34.1, + "unit" : "kg/m2", + "system" : "http://unitsofmeasure.org", + "code" : "kg/m2" + } + }] + }, + { + "linkId" : "status", + "text" : "Subject's status (Case or Control)", + "answer" : [{ + "valueCoding" : { + "system" : "https://uts.nlm.nih.gov/uts/umls", + "code" : "C99269", + "display" : "Case" + } + }] + }] } \ No newline at end of file diff --git a/QuestionnaireResponse-example-questionnaire-demographics-response-1.json.html b/QuestionnaireResponse-example-questionnaire-demographics-response-1.json.html index 31beb62e..c3bdefa3 100644 --- a/QuestionnaireResponse-example-questionnaire-demographics-response-1.json.html +++ b/QuestionnaireResponse-example-questionnaire-demographics-response-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -372,7 +372,7 @@ <h2 id="root">: Example of a QuestionnaireResponse to Represent Raw Data - JSON <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/QuestionnaireResponse-example-questionnaire-demographics-response-1.ttl b/QuestionnaireResponse-example-questionnaire-demographics-response-1.ttl index 06d22807..3e4c0061 100644 --- a/QuestionnaireResponse-example-questionnaire-demographics-response-1.ttl +++ b/QuestionnaireResponse-example-questionnaire-demographics-response-1.ttl @@ -7,19 +7,19 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/QuestionnaireResponse/example-questionnaire-demographics-response-1> a fhir:QuestionnaireResponse; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "example-questionnaire-demographics-response-1"]; + fhir:Resource.id [ fhir:value "example-questionnaire-demographics-response-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"1\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 2px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"The linkId for the item\">LinkId</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Text for the item\">Text</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Minimum and Maximum # of times the the itemcan appear in the instance\">Definition</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"The type of the item\">Answer</a><span style=\"float: right\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_q_root.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"QuestionnaireResponseRoot\" class=\"hierarchy\"/> example-questionnaire-demographics-response-1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">QuestionnaireResponse</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"></td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Item\" class=\"hierarchy\"/> subjectid</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject ID</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">SUB0001</td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Item\" class=\"hierarchy\"/> gender</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Gender</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Female</td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Item\" class=\"hierarchy\"/> bmi</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's BMI, Measured at Enrollment</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span><span>34.1 kg/m2</span></span></td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Item\" class=\"hierarchy\"/> status</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's status (Case or Control)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span><span>https://uts.nlm.nih.gov/uts/umls C99269: Case</span></span></td></tr>\r\n<tr><td colspan=\"4\" class=\"hierarchy\"><br/><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # fhir:QuestionnaireResponse.questionnaire [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics"; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics> - ]; - fhir:QuestionnaireResponse.status [ fhir:value "completed"]; + ]; # + fhir:QuestionnaireResponse.status [ fhir:value "completed"]; # fhir:QuestionnaireResponse.subject [ fhir:Reference.reference [ fhir:value "example-sum-patient-1" ] - ]; + ]; # fhir:QuestionnaireResponse.item [ fhir:index 0; fhir:QuestionnaireResponse.item.linkId [ fhir:value "subjectid" ]; @@ -61,7 +61,7 @@ fhir:Coding.display [ fhir:value "Case" ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/QuestionnaireResponse-example-questionnaire-demographics-response-1.ttl.html b/QuestionnaireResponse-example-questionnaire-demographics-response-1.ttl.html index e7d908cf..6508a3e4 100644 --- a/QuestionnaireResponse-example-questionnaire-demographics-response-1.ttl.html +++ b/QuestionnaireResponse-example-questionnaire-demographics-response-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,19 +292,19 @@ <h2 id="root">: Example of a QuestionnaireResponse to Represent Raw Data - TTL R a fhir:QuestionnaireResponse; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/questionnaireresponse.html#QuestionnaireResponse.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "example-questionnaire-demographics-response-1"]; + <a href="http://hl7.org/fhir/R4/questionnaireresponse.html#QuestionnaireResponse.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "example-questionnaire-demographics-response-1"]; # <a href="http://hl7.org/fhir/R4/questionnaireresponse.html#QuestionnaireResponse.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"1\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 2px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"The linkId for the item\">LinkId</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Text for the item\">Text</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Minimum and Maximum # of times the the itemcan appear in the instance\">Definition</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"The type of the item\">Answer</a><span style=\"float: right\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_q_root.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"QuestionnaireResponseRoot\" class=\"hierarchy\"/> example-questionnaire-demographics-response-1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">QuestionnaireResponse</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"></td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Item\" class=\"hierarchy\"/> subjectid</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject ID</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">SUB0001</td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Item\" class=\"hierarchy\"/> gender</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Gender</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Female</td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Item\" class=\"hierarchy\"/> bmi</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's BMI, Measured at Enrollment</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span><span>34.1 kg/m2</span></span></td></tr>\r\n<tr style=\"border: 1px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon-q-string.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Item\" class=\"hierarchy\"/> status</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Subject's status (Case or Control)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 1px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span><span>https://uts.nlm.nih.gov/uts/umls C99269: Case</span></span></td></tr>\r\n<tr><td colspan=\"4\" class=\"hierarchy\"><br/><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/questionnaireresponse.html#QuestionnaireResponse.questionnaire">fhir:QuestionnaireResponse.questionnaire</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics> - ]; - <a href="http://hl7.org/fhir/R4/questionnaireresponse.html#QuestionnaireResponse.status">fhir:QuestionnaireResponse.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "completed"]; + ]; # + <a href="http://hl7.org/fhir/R4/questionnaireresponse.html#QuestionnaireResponse.status">fhir:QuestionnaireResponse.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "completed"]; # <a href="http://hl7.org/fhir/R4/questionnaireresponse.html#QuestionnaireResponse.subject">fhir:QuestionnaireResponse.subject</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "example-sum-patient-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/questionnaireresponse.html#QuestionnaireResponse.item">fhir:QuestionnaireResponse.item</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/questionnaireresponse.html#QuestionnaireResponse.item.linkId">fhir:QuestionnaireResponse.item.linkId</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "subjectid" ]; @@ -340,7 +340,7 @@ <h2 id="root">: Example of a QuestionnaireResponse to Represent Raw Data - TTL R <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://uts.nlm.nih.gov/uts/umls" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "C99269" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Case" ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -378,7 +378,7 @@ <h2 id="root">: Example of a QuestionnaireResponse to Represent Raw Data - TTL R <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/QuestionnaireResponse-example-questionnaire-demographics-response-1.xml.html b/QuestionnaireResponse-example-questionnaire-demographics-response-1.xml.html index 85278eb6..685cfbc7 100644 --- a/QuestionnaireResponse-example-questionnaire-demographics-response-1.xml.html +++ b/QuestionnaireResponse-example-questionnaire-demographics-response-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -368,7 +368,7 @@ <h2 id="root">: Example of a QuestionnaireResponse to Represent Raw Data - XML R <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-ncpi-research-study-01.change.history.html b/ResearchStudy-ncpi-research-study-01.change.history.html index 0ee4ee06..2c771808 100644 --- a/ResearchStudy-ncpi-research-study-01.change.history.html +++ b/ResearchStudy-ncpi-research-study-01.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ResearchStudy/ncpi-research-study-01 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-ncpi-research-study-01.html b/ResearchStudy-ncpi-research-study-01.html index e8b82f6d..ce9d4bff 100644 --- a/ResearchStudy-ncpi-research-study-01.html +++ b/ResearchStudy-ncpi-research-study-01.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example ResearchStudy: ncpi-research-study-01</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-ncpi-research-study-01.json b/ResearchStudy-ncpi-research-study-01.json index 5e3a82f9..885ec3de 100644 --- a/ResearchStudy-ncpi-research-study-01.json +++ b/ResearchStudy-ncpi-research-study-01.json @@ -1,38 +1,28 @@ -{ - "resourceType": "ResearchStudy", - "id": "ncpi-research-study-01", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchStudy</b><a name=\"ncpi-research-study-01\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchStudy "ncpi-research-study-01" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-ncpi-research-study.html\">NCPI Research Study</a></p></div><p><b>title</b>: Example research study</p><p><b>status</b>: completed</p><p><b>primaryPurposeType</b>: diagnostic <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#diagnostic)</span></p><p><b>category</b>: Study Cohort <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#StudyCohort)</span></p><p><b>enrollment</b>: <a href=\"Group-ncpi-research-study-01-group-01-main.html\">Group/ncpi-research-study-01-group-01-main</a> "Study 01's participants"</p></div>" - }, - "title": "Example research study", - "status": "completed", - "primaryPurposeType": { - "coding": [ - { - "code": "diagnostic" - } - ] - }, - "category": [ - { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", - "code": "StudyCohort", - "display": "Study Cohort" - } - ] - } - ], - "enrollment": [ - { - "reference": "Group/ncpi-research-study-01-group-01-main" - } - ] +{ + "resourceType" : "ResearchStudy", + "id" : "ncpi-research-study-01", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchStudy</b><a name=\"ncpi-research-study-01\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchStudy "ncpi-research-study-01" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-ncpi-research-study.html\">NCPI Research Study</a></p></div><p><b>title</b>: Example research study</p><p><b>status</b>: completed</p><p><b>primaryPurposeType</b>: diagnostic <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#diagnostic)</span></p><p><b>category</b>: Study Cohort <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#StudyCohort)</span></p><p><b>enrollment</b>: <a href=\"Group-ncpi-research-study-01-group-01-main.html\">Group/ncpi-research-study-01-group-01-main</a> "Study 01's participants"</p></div>" + }, + "title" : "Example research study", + "status" : "completed", + "primaryPurposeType" : { + "coding" : [{ + "code" : "diagnostic" + }] + }, + "category" : [{ + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", + "code" : "StudyCohort", + "display" : "Study Cohort" + }] + }], + "enrollment" : [{ + "reference" : "Group/ncpi-research-study-01-group-01-main" + }] } \ No newline at end of file diff --git a/ResearchStudy-ncpi-research-study-01.json.html b/ResearchStudy-ncpi-research-study-01.json.html index a64d14f3..a8f372c9 100644 --- a/ResearchStudy-ncpi-research-study-01.json.html +++ b/ResearchStudy-ncpi-research-study-01.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -350,7 +350,7 @@ <h2 id="root">: ncpi-research-study-01 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-ncpi-research-study-01.ttl b/ResearchStudy-ncpi-research-study-01.ttl index d9059c41..5cc9983b 100644 --- a/ResearchStudy-ncpi-research-study-01.ttl +++ b/ResearchStudy-ncpi-research-study-01.ttl @@ -7,26 +7,26 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ResearchStudy/ncpi-research-study-01> a fhir:ResearchStudy; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "ncpi-research-study-01"]; + fhir:Resource.id [ fhir:value "ncpi-research-study-01"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchStudy</b><a name=\"ncpi-research-study-01\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchStudy "ncpi-research-study-01" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-ncpi-research-study.html\">NCPI Research Study</a></p></div><p><b>title</b>: Example research study</p><p><b>status</b>: completed</p><p><b>primaryPurposeType</b>: diagnostic <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#diagnostic)</span></p><p><b>category</b>: Study Cohort <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#StudyCohort)</span></p><p><b>enrollment</b>: <a href=\"Group-ncpi-research-study-01-group-01-main.html\">Group/ncpi-research-study-01-group-01-main</a> "Study 01's participants"</p></div>" - ]; - fhir:ResearchStudy.title [ fhir:value "Example research study"]; - fhir:ResearchStudy.status [ fhir:value "completed"]; + ]; # + fhir:ResearchStudy.title [ fhir:value "Example research study"]; # + fhir:ResearchStudy.status [ fhir:value "completed"]; # fhir:ResearchStudy.primaryPurposeType [ fhir:CodeableConcept.coding [ fhir:index 0; fhir:Coding.code [ fhir:value "diagnostic" ] ] - ]; + ]; # fhir:ResearchStudy.category [ fhir:index 0; fhir:CodeableConcept.coding [ @@ -35,12 +35,12 @@ fhir:Coding.code [ fhir:value "StudyCohort" ]; fhir:Coding.display [ fhir:value "Study Cohort" ] ] - ]; + ]; # fhir:ResearchStudy.enrollment [ fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Group/ncpi-research-study-01-group-01-main>; fhir:Reference.reference [ fhir:value "Group/ncpi-research-study-01-group-01-main" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ResearchStudy-ncpi-research-study-01.ttl.html b/ResearchStudy-ncpi-research-study-01.ttl.html index 5e106335..87a3d38e 100644 --- a/ResearchStudy-ncpi-research-study-01.ttl.html +++ b/ResearchStudy-ncpi-research-study-01.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,24 +292,24 @@ <h2 id="root">: ncpi-research-study-01 - TTL Representation</h2> a fhir:ResearchStudy; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "ncpi-research-study-01"]; + <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "ncpi-research-study-01"]; # <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchStudy</b><a name=\"ncpi-research-study-01\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchStudy &quot;ncpi-research-study-01&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-ncpi-research-study.html\">NCPI Research Study</a></p></div><p><b>title</b>: Example research study</p><p><b>status</b>: completed</p><p><b>primaryPurposeType</b>: diagnostic <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#diagnostic)</span></p><p><b>category</b>: Study Cohort <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#StudyCohort)</span></p><p><b>enrollment</b>: <a href=\"Group-ncpi-research-study-01-group-01-main.html\">Group/ncpi-research-study-01-group-01-main</a> &quot;Study 01's participants&quot;</p></div>" - ]; - <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.title">fhir:ResearchStudy.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Example research study"]; - <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.status">fhir:ResearchStudy.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "completed"]; + ]; # + <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.title">fhir:ResearchStudy.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Example research study"]; # + <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.status">fhir:ResearchStudy.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "completed"]; # <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.primaryPurposeType">fhir:ResearchStudy.primaryPurposeType</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "diagnostic" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.category">fhir:ResearchStudy.category</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ @@ -317,11 +317,11 @@ <h2 id="root">: ncpi-research-study-01 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "StudyCohort" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Study Cohort" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.enrollment">fhir:ResearchStudy.enrollment</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Group/ncpi-research-study-01-group-01-main" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -359,7 +359,7 @@ <h2 id="root">: ncpi-research-study-01 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-ncpi-research-study-01.xml.html b/ResearchStudy-ncpi-research-study-01.xml.html index ac2eb3a6..8b2b36cb 100644 --- a/ResearchStudy-ncpi-research-study-01.xml.html +++ b/ResearchStudy-ncpi-research-study-01.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -342,7 +342,7 @@ <h2 id="root">: ncpi-research-study-01 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-research-study-cmg.change.history.html b/ResearchStudy-research-study-cmg.change.history.html index e6d55fbc..105fa561 100644 --- a/ResearchStudy-research-study-cmg.change.history.html +++ b/ResearchStudy-research-study-cmg.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ResearchStudy/research-study-cmg - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-research-study-cmg.html b/ResearchStudy-research-study-cmg.html index eab37d26..5fdbf599 100644 --- a/ResearchStudy-research-study-cmg.html +++ b/ResearchStudy-research-study-cmg.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example ResearchStudy: research-study-cmg</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-research-study-cmg.json b/ResearchStudy-research-study-cmg.json index 0401d0ca..a8d5d583 100644 --- a/ResearchStudy-research-study-cmg.json +++ b/ResearchStudy-research-study-cmg.json @@ -1,33 +1,25 @@ -{ - "resourceType": "ResearchStudy", - "id": "research-study-cmg", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchStudy</b><a name=\"research-study-cmg\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchStudy "research-study-cmg" </p></div><p><b>title</b>: Center for Mendelian Genomics</p><p><b>status</b>: completed</p><p><b>primaryPurposeType</b>: diagnostic <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#diagnostic)</span></p><p><b>category</b>: Study Consortium <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Consortium)</span></p><p><b>condition</b>: Mendelian <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p></div>" - }, - "title": "Center for Mendelian Genomics", - "status": "completed", - "primaryPurposeType": { - "coding": [ - { - "code": "diagnostic" - } - ] - }, - "category": [ - { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", - "code": "Consortium", - "display": "Study Consortium" - } - ] - } - ], - "condition": [ - { - "text": "Mendelian" - } - ] +{ + "resourceType" : "ResearchStudy", + "id" : "research-study-cmg", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchStudy</b><a name=\"research-study-cmg\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchStudy "research-study-cmg" </p></div><p><b>title</b>: Center for Mendelian Genomics</p><p><b>status</b>: completed</p><p><b>primaryPurposeType</b>: diagnostic <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#diagnostic)</span></p><p><b>category</b>: Study Consortium <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Consortium)</span></p><p><b>condition</b>: Mendelian <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p></div>" + }, + "title" : "Center for Mendelian Genomics", + "status" : "completed", + "primaryPurposeType" : { + "coding" : [{ + "code" : "diagnostic" + }] + }, + "category" : [{ + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", + "code" : "Consortium", + "display" : "Study Consortium" + }] + }], + "condition" : [{ + "text" : "Mendelian" + }] } \ No newline at end of file diff --git a/ResearchStudy-research-study-cmg.json.html b/ResearchStudy-research-study-cmg.json.html index 101afc21..24f45eec 100644 --- a/ResearchStudy-research-study-cmg.json.html +++ b/ResearchStudy-research-study-cmg.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -345,7 +345,7 @@ <h2 id="root">: research-study-cmg - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-research-study-cmg.ttl b/ResearchStudy-research-study-cmg.ttl index 30a83504..38d22eab 100644 --- a/ResearchStudy-research-study-cmg.ttl +++ b/ResearchStudy-research-study-cmg.ttl @@ -7,19 +7,19 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ResearchStudy/research-study-cmg> a fhir:ResearchStudy; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "research-study-cmg"]; + fhir:Resource.id [ fhir:value "research-study-cmg"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchStudy</b><a name=\"research-study-cmg\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchStudy "research-study-cmg" </p></div><p><b>title</b>: Center for Mendelian Genomics</p><p><b>status</b>: completed</p><p><b>primaryPurposeType</b>: diagnostic <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#diagnostic)</span></p><p><b>category</b>: Study Consortium <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Consortium)</span></p><p><b>condition</b>: Mendelian <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p></div>" - ]; - fhir:ResearchStudy.title [ fhir:value "Center for Mendelian Genomics"]; - fhir:ResearchStudy.status [ fhir:value "completed"]; + ]; # + fhir:ResearchStudy.title [ fhir:value "Center for Mendelian Genomics"]; # + fhir:ResearchStudy.status [ fhir:value "completed"]; # fhir:ResearchStudy.primaryPurposeType [ fhir:CodeableConcept.coding [ fhir:index 0; fhir:Coding.code [ fhir:value "diagnostic" ] ] - ]; + ]; # fhir:ResearchStudy.category [ fhir:index 0; fhir:CodeableConcept.coding [ @@ -28,11 +28,11 @@ fhir:Coding.code [ fhir:value "Consortium" ]; fhir:Coding.display [ fhir:value "Study Consortium" ] ] - ]; + ]; # fhir:ResearchStudy.condition [ fhir:index 0; fhir:CodeableConcept.text [ fhir:value "Mendelian" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ResearchStudy-research-study-cmg.ttl.html b/ResearchStudy-research-study-cmg.ttl.html index 871737f7..26236f25 100644 --- a/ResearchStudy-research-study-cmg.ttl.html +++ b/ResearchStudy-research-study-cmg.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,18 +292,18 @@ <h2 id="root">: research-study-cmg - TTL Representation</h2> a fhir:ResearchStudy; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "research-study-cmg"]; + <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "research-study-cmg"]; # <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchStudy</b><a name=\"research-study-cmg\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchStudy &quot;research-study-cmg&quot; </p></div><p><b>title</b>: Center for Mendelian Genomics</p><p><b>status</b>: completed</p><p><b>primaryPurposeType</b>: diagnostic <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#diagnostic)</span></p><p><b>category</b>: Study Consortium <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#Consortium)</span></p><p><b>condition</b>: Mendelian <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p></div>" - ]; - <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.title">fhir:ResearchStudy.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Center for Mendelian Genomics"]; - <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.status">fhir:ResearchStudy.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "completed"]; + ]; # + <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.title">fhir:ResearchStudy.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Center for Mendelian Genomics"]; # + <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.status">fhir:ResearchStudy.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "completed"]; # <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.primaryPurposeType">fhir:ResearchStudy.primaryPurposeType</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "diagnostic" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.category">fhir:ResearchStudy.category</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ @@ -311,11 +311,11 @@ <h2 id="root">: research-study-cmg - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "Consortium" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Study Consortium" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.condition">fhir:ResearchStudy.condition</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.text">fhir:CodeableConcept.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Mendelian" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -353,7 +353,7 @@ <h2 id="root">: research-study-cmg - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-research-study-cmg.xml.html b/ResearchStudy-research-study-cmg.xml.html index dce28dc9..8658b41c 100644 --- a/ResearchStudy-research-study-cmg.xml.html +++ b/ResearchStudy-research-study-cmg.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -338,7 +338,7 @@ <h2 id="root">: research-study-cmg - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-research-study-example-1.change.history.html b/ResearchStudy-research-study-example-1.change.history.html index 3e7b4263..ee4e258b 100644 --- a/ResearchStudy-research-study-example-1.change.history.html +++ b/ResearchStudy-research-study-example-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ResearchStudy/research-study-example-1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-research-study-example-1.html b/ResearchStudy-research-study-example-1.html index 9ce0ce4f..61918416 100644 --- a/ResearchStudy-research-study-example-1.html +++ b/ResearchStudy-research-study-example-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example ResearchStudy: research-study-example-1</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-research-study-example-1.json b/ResearchStudy-research-study-example-1.json index b8411ca4..2d09ef91 100644 --- a/ResearchStudy-research-study-example-1.json +++ b/ResearchStudy-research-study-example-1.json @@ -1,13 +1,13 @@ -{ - "resourceType": "ResearchStudy", - "id": "research-study-example-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchStudy</b><a name=\"research-study-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchStudy "research-study-example-1" </p></div><p><b>title</b>: NCPI Research Study Example 1</p><p><b>status</b>: completed</p><p><b>principalInvestigator</b>: <a href=\"PractitionerRole-practitioner-role-example-1.html\">PractitionerRole/practitioner-role-example-1</a></p></div>" - }, - "title": "NCPI Research Study Example 1", - "status": "completed", - "principalInvestigator": { - "reference": "PractitionerRole/practitioner-role-example-1" - } +{ + "resourceType" : "ResearchStudy", + "id" : "research-study-example-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchStudy</b><a name=\"research-study-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchStudy "research-study-example-1" </p></div><p><b>title</b>: NCPI Research Study Example 1</p><p><b>status</b>: completed</p><p><b>principalInvestigator</b>: <a href=\"PractitionerRole-practitioner-role-example-1.html\">PractitionerRole/practitioner-role-example-1</a></p></div>" + }, + "title" : "NCPI Research Study Example 1", + "status" : "completed", + "principalInvestigator" : { + "reference" : "PractitionerRole/practitioner-role-example-1" + } } \ No newline at end of file diff --git a/ResearchStudy-research-study-example-1.json.html b/ResearchStudy-research-study-example-1.json.html index c11a3b5a..2f537ac1 100644 --- a/ResearchStudy-research-study-example-1.json.html +++ b/ResearchStudy-research-study-example-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -325,7 +325,7 @@ <h2 id="root">: research-study-example-1 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-research-study-example-1.ttl b/ResearchStudy-research-study-example-1.ttl index 66cb5e47..d5bbd4ec 100644 --- a/ResearchStudy-research-study-example-1.ttl +++ b/ResearchStudy-research-study-example-1.ttl @@ -7,17 +7,17 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ResearchStudy/research-study-example-1> a fhir:ResearchStudy; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "research-study-example-1"]; + fhir:Resource.id [ fhir:value "research-study-example-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchStudy</b><a name=\"research-study-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchStudy "research-study-example-1" </p></div><p><b>title</b>: NCPI Research Study Example 1</p><p><b>status</b>: completed</p><p><b>principalInvestigator</b>: <a href=\"PractitionerRole-practitioner-role-example-1.html\">PractitionerRole/practitioner-role-example-1</a></p></div>" - ]; - fhir:ResearchStudy.title [ fhir:value "NCPI Research Study Example 1"]; - fhir:ResearchStudy.status [ fhir:value "completed"]; + ]; # + fhir:ResearchStudy.title [ fhir:value "NCPI Research Study Example 1"]; # + fhir:ResearchStudy.status [ fhir:value "completed"]; # fhir:ResearchStudy.principalInvestigator [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/PractitionerRole/practitioner-role-example-1>; fhir:Reference.reference [ fhir:value "PractitionerRole/practitioner-role-example-1" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ResearchStudy-research-study-example-1.ttl.html b/ResearchStudy-research-study-example-1.ttl.html index 16a0145b..b2497eb6 100644 --- a/ResearchStudy-research-study-example-1.ttl.html +++ b/ResearchStudy-research-study-example-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,16 +292,16 @@ <h2 id="root">: research-study-example-1 - TTL Representation</h2> a fhir:ResearchStudy; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "research-study-example-1"]; + <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "research-study-example-1"]; # <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchStudy</b><a name=\"research-study-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchStudy &quot;research-study-example-1&quot; </p></div><p><b>title</b>: NCPI Research Study Example 1</p><p><b>status</b>: completed</p><p><b>principalInvestigator</b>: <a href=\"PractitionerRole-practitioner-role-example-1.html\">PractitionerRole/practitioner-role-example-1</a></p></div>" - ]; - <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.title">fhir:ResearchStudy.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI Research Study Example 1"]; - <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.status">fhir:ResearchStudy.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "completed"]; + ]; # + <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.title">fhir:ResearchStudy.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI Research Study Example 1"]; # + <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.status">fhir:ResearchStudy.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "completed"]; # <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.principalInvestigator">fhir:ResearchStudy.principalInvestigator</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "PractitionerRole/practitioner-role-example-1" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -339,7 +339,7 @@ <h2 id="root">: research-study-example-1 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-research-study-example-1.xml.html b/ResearchStudy-research-study-example-1.xml.html index 4be27ee8..72e0aad4 100644 --- a/ResearchStudy-research-study-example-1.xml.html +++ b/ResearchStudy-research-study-example-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -325,7 +325,7 @@ <h2 id="root">: research-study-example-1 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-research-study-phs000711.change.history.html b/ResearchStudy-research-study-phs000711.change.history.html index 846849c5..c19cb358 100644 --- a/ResearchStudy-research-study-phs000711.change.history.html +++ b/ResearchStudy-research-study-phs000711.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ResearchStudy/research-study-phs000711 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-research-study-phs000711.html b/ResearchStudy-research-study-phs000711.html index ef45fd02..069c41d8 100644 --- a/ResearchStudy-research-study-phs000711.html +++ b/ResearchStudy-research-study-phs000711.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example ResearchStudy: research-study-phs000711</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-research-study-phs000711.json b/ResearchStudy-research-study-phs000711.json index ddf17365..8b0f1a60 100644 --- a/ResearchStudy-research-study-phs000711.json +++ b/ResearchStudy-research-study-phs000711.json @@ -1,38 +1,28 @@ -{ - "resourceType": "ResearchStudy", - "id": "research-study-phs000711", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchStudy</b><a name=\"research-study-phs000711\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchStudy "research-study-phs000711" </p></div><p><b>title</b>: Baylor Hopkins Center for Mendelian Genomics (BH CMG)</p><p><b>partOf</b>: <a href=\"ResearchStudy-research-study-cmg.html\">ResearchStudy/research-study-cmg</a></p><p><b>status</b>: completed</p><p><b>primaryPurposeType</b>: diagnostic <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#diagnostic)</span></p><p><b>category</b>: Study Cohort <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#StudyCohort)</span></p><p><b>condition</b>: Mendelian <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p></div>" - }, - "title": "Baylor Hopkins Center for Mendelian Genomics (BH CMG)", - "partOf": [ - { - "reference": "ResearchStudy/research-study-cmg" - } - ], - "status": "completed", - "primaryPurposeType": { - "coding": [ - { - "code": "diagnostic" - } - ] - }, - "category": [ - { - "coding": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", - "code": "StudyCohort", - "display": "Study Cohort" - } - ] - } - ], - "condition": [ - { - "text": "Mendelian" - } - ] +{ + "resourceType" : "ResearchStudy", + "id" : "research-study-phs000711", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchStudy</b><a name=\"research-study-phs000711\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchStudy "research-study-phs000711" </p></div><p><b>title</b>: Baylor Hopkins Center for Mendelian Genomics (BH CMG)</p><p><b>partOf</b>: <a href=\"ResearchStudy-research-study-cmg.html\">ResearchStudy/research-study-cmg</a></p><p><b>status</b>: completed</p><p><b>primaryPurposeType</b>: diagnostic <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#diagnostic)</span></p><p><b>category</b>: Study Cohort <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#StudyCohort)</span></p><p><b>condition</b>: Mendelian <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p></div>" + }, + "title" : "Baylor Hopkins Center for Mendelian Genomics (BH CMG)", + "partOf" : [{ + "reference" : "ResearchStudy/research-study-cmg" + }], + "status" : "completed", + "primaryPurposeType" : { + "coding" : [{ + "code" : "diagnostic" + }] + }, + "category" : [{ + "coding" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", + "code" : "StudyCohort", + "display" : "Study Cohort" + }] + }], + "condition" : [{ + "text" : "Mendelian" + }] } \ No newline at end of file diff --git a/ResearchStudy-research-study-phs000711.json.html b/ResearchStudy-research-study-phs000711.json.html index b10345ec..ae152828 100644 --- a/ResearchStudy-research-study-phs000711.json.html +++ b/ResearchStudy-research-study-phs000711.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -350,7 +350,7 @@ <h2 id="root">: research-study-phs000711 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-research-study-phs000711.ttl b/ResearchStudy-research-study-phs000711.ttl index 49b6a790..9ec81938 100644 --- a/ResearchStudy-research-study-phs000711.ttl +++ b/ResearchStudy-research-study-phs000711.ttl @@ -7,24 +7,24 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ResearchStudy/research-study-phs000711> a fhir:ResearchStudy; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "research-study-phs000711"]; + fhir:Resource.id [ fhir:value "research-study-phs000711"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchStudy</b><a name=\"research-study-phs000711\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchStudy "research-study-phs000711" </p></div><p><b>title</b>: Baylor Hopkins Center for Mendelian Genomics (BH CMG)</p><p><b>partOf</b>: <a href=\"ResearchStudy-research-study-cmg.html\">ResearchStudy/research-study-cmg</a></p><p><b>status</b>: completed</p><p><b>primaryPurposeType</b>: diagnostic <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#diagnostic)</span></p><p><b>category</b>: Study Cohort <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#StudyCohort)</span></p><p><b>condition</b>: Mendelian <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p></div>" - ]; - fhir:ResearchStudy.title [ fhir:value "Baylor Hopkins Center for Mendelian Genomics (BH CMG)"]; + ]; # + fhir:ResearchStudy.title [ fhir:value "Baylor Hopkins Center for Mendelian Genomics (BH CMG)"]; # fhir:ResearchStudy.partOf [ fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/ResearchStudy/research-study-cmg>; fhir:Reference.reference [ fhir:value "ResearchStudy/research-study-cmg" ] - ]; - fhir:ResearchStudy.status [ fhir:value "completed"]; + ]; # + fhir:ResearchStudy.status [ fhir:value "completed"]; # fhir:ResearchStudy.primaryPurposeType [ fhir:CodeableConcept.coding [ fhir:index 0; fhir:Coding.code [ fhir:value "diagnostic" ] ] - ]; + ]; # fhir:ResearchStudy.category [ fhir:index 0; fhir:CodeableConcept.coding [ @@ -33,11 +33,11 @@ fhir:Coding.code [ fhir:value "StudyCohort" ]; fhir:Coding.display [ fhir:value "Study Cohort" ] ] - ]; + ]; # fhir:ResearchStudy.condition [ fhir:index 0; fhir:CodeableConcept.text [ fhir:value "Mendelian" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ResearchStudy-research-study-phs000711.ttl.html b/ResearchStudy-research-study-phs000711.ttl.html index 76181e4d..2df41afe 100644 --- a/ResearchStudy-research-study-phs000711.ttl.html +++ b/ResearchStudy-research-study-phs000711.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,22 +292,22 @@ <h2 id="root">: research-study-phs000711 - TTL Representation</h2> a fhir:ResearchStudy; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "research-study-phs000711"]; + <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "research-study-phs000711"]; # <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchStudy</b><a name=\"research-study-phs000711\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchStudy &quot;research-study-phs000711&quot; </p></div><p><b>title</b>: Baylor Hopkins Center for Mendelian Genomics (BH CMG)</p><p><b>partOf</b>: <a href=\"ResearchStudy-research-study-cmg.html\">ResearchStudy/research-study-cmg</a></p><p><b>status</b>: completed</p><p><b>primaryPurposeType</b>: diagnostic <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ([not stated]#diagnostic)</span></p><p><b>category</b>: Study Cohort <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncpi.html\">NCPI FHIR Codes</a>#StudyCohort)</span></p><p><b>condition</b>: Mendelian <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p></div>" - ]; - <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.title">fhir:ResearchStudy.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Baylor Hopkins Center for Mendelian Genomics (BH CMG)"]; + ]; # + <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.title">fhir:ResearchStudy.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Baylor Hopkins Center for Mendelian Genomics (BH CMG)"]; # <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.partOf">fhir:ResearchStudy.partOf</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ResearchStudy/research-study-cmg" ] - ]; - <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.status">fhir:ResearchStudy.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "completed"]; + ]; # + <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.status">fhir:ResearchStudy.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "completed"]; # <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.primaryPurposeType">fhir:ResearchStudy.primaryPurposeType</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "diagnostic" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.category">fhir:ResearchStudy.category</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ @@ -315,11 +315,11 @@ <h2 id="root">: research-study-phs000711 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "StudyCohort" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Study Cohort" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/researchstudy.html#ResearchStudy.condition">fhir:ResearchStudy.condition</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.text">fhir:CodeableConcept.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Mendelian" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -357,7 +357,7 @@ <h2 id="root">: research-study-phs000711 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchStudy-research-study-phs000711.xml.html b/ResearchStudy-research-study-phs000711.xml.html index ae954cd0..f7a96010 100644 --- a/ResearchStudy-research-study-phs000711.xml.html +++ b/ResearchStudy-research-study-phs000711.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -341,7 +341,7 @@ <h2 id="root">: research-study-phs000711 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-example-1.change.history.html b/ResearchSubject-research-subject-example-1.change.history.html index 961ed05d..ad656aae 100644 --- a/ResearchSubject-research-subject-example-1.change.history.html +++ b/ResearchSubject-research-subject-example-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ResearchSubject/research-subject-example-1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-example-1.html b/ResearchSubject-research-subject-example-1.html index 252710aa..dd76d413 100644 --- a/ResearchSubject-research-subject-example-1.html +++ b/ResearchSubject-research-subject-example-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example ResearchSubject: research-subject-example-1</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-example-1.json b/ResearchSubject-research-subject-example-1.json index 8f66a0f7..030622ae 100644 --- a/ResearchSubject-research-subject-example-1.json +++ b/ResearchSubject-research-subject-example-1.json @@ -1,15 +1,15 @@ -{ - "resourceType": "ResearchSubject", - "id": "research-subject-example-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject "research-subject-example-1" </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-research-study-example-1.html\">ResearchStudy/research-study-example-1</a></p><p><b>individual</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p></div>" - }, - "status": "on-study", - "study": { - "reference": "ResearchStudy/research-study-example-1" - }, - "individual": { - "reference": "Patient/patient-example-1" - } +{ + "resourceType" : "ResearchSubject", + "id" : "research-subject-example-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject "research-subject-example-1" </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-research-study-example-1.html\">ResearchStudy/research-study-example-1</a></p><p><b>individual</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p></div>" + }, + "status" : "on-study", + "study" : { + "reference" : "ResearchStudy/research-study-example-1" + }, + "individual" : { + "reference" : "Patient/patient-example-1" + } } \ No newline at end of file diff --git a/ResearchSubject-research-subject-example-1.json.html b/ResearchSubject-research-subject-example-1.json.html index 642dc231..3290c81b 100644 --- a/ResearchSubject-research-subject-example-1.json.html +++ b/ResearchSubject-research-subject-example-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -327,7 +327,7 @@ <h2 id="root">: research-subject-example-1 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-example-1.ttl b/ResearchSubject-research-subject-example-1.ttl index f9bdfbc6..7a790123 100644 --- a/ResearchSubject-research-subject-example-1.ttl +++ b/ResearchSubject-research-subject-example-1.ttl @@ -7,20 +7,20 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ResearchSubject/research-subject-example-1> a fhir:ResearchSubject; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "research-subject-example-1"]; + fhir:Resource.id [ fhir:value "research-subject-example-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject "research-subject-example-1" </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-research-study-example-1.html\">ResearchStudy/research-study-example-1</a></p><p><b>individual</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p></div>" - ]; - fhir:ResearchSubject.status [ fhir:value "on-study"]; + ]; # + fhir:ResearchSubject.status [ fhir:value "on-study"]; # fhir:ResearchSubject.study [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/ResearchStudy/research-study-example-1>; fhir:Reference.reference [ fhir:value "ResearchStudy/research-study-example-1" ] - ]; + ]; # fhir:ResearchSubject.individual [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-1>; fhir:Reference.reference [ fhir:value "Patient/patient-example-1" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ResearchSubject-research-subject-example-1.ttl.html b/ResearchSubject-research-subject-example-1.ttl.html index 7c9c2ef9..d13dfeb2 100644 --- a/ResearchSubject-research-subject-example-1.ttl.html +++ b/ResearchSubject-research-subject-example-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,18 +292,18 @@ <h2 id="root">: research-subject-example-1 - TTL Representation</h2> a fhir:ResearchSubject; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "research-subject-example-1"]; + <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "research-subject-example-1"]; # <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject &quot;research-subject-example-1&quot; </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-research-study-example-1.html\">ResearchStudy/research-study-example-1</a></p><p><b>individual</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> &quot; SMITH&quot;</p></div>" - ]; - <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.status">fhir:ResearchSubject.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "on-study"]; + ]; # + <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.status">fhir:ResearchSubject.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "on-study"]; # <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.study">fhir:ResearchSubject.study</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ResearchStudy/research-study-example-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.individual">fhir:ResearchSubject.individual</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/patient-example-1" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -341,7 +341,7 @@ <h2 id="root">: research-subject-example-1 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-example-1.xml.html b/ResearchSubject-research-subject-example-1.xml.html index 5744ad3b..c189e688 100644 --- a/ResearchSubject-research-subject-example-1.xml.html +++ b/ResearchSubject-research-subject-example-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -327,7 +327,7 @@ <h2 id="root">: research-subject-example-1 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-example-2.change.history.html b/ResearchSubject-research-subject-example-2.change.history.html index 03b9993f..528e891a 100644 --- a/ResearchSubject-research-subject-example-2.change.history.html +++ b/ResearchSubject-research-subject-example-2.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ResearchSubject/research-subject-example-2 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-example-2.html b/ResearchSubject-research-subject-example-2.html index faf43058..7ab065a8 100644 --- a/ResearchSubject-research-subject-example-2.html +++ b/ResearchSubject-research-subject-example-2.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example ResearchSubject: research-subject-example-2</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-example-2.json b/ResearchSubject-research-subject-example-2.json index 3c5f05b6..d30a8bb9 100644 --- a/ResearchSubject-research-subject-example-2.json +++ b/ResearchSubject-research-subject-example-2.json @@ -1,15 +1,15 @@ -{ - "resourceType": "ResearchSubject", - "id": "research-subject-example-2", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-example-2\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject "research-subject-example-2" </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-research-study-example-1.html\">ResearchStudy/research-study-example-1</a></p><p><b>individual</b>: <a href=\"Patient-patient-example-2.html\">Patient/patient-example-2</a> " SMITH"</p></div>" - }, - "status": "on-study", - "study": { - "reference": "ResearchStudy/research-study-example-1" - }, - "individual": { - "reference": "Patient/patient-example-2" - } +{ + "resourceType" : "ResearchSubject", + "id" : "research-subject-example-2", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-example-2\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject "research-subject-example-2" </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-research-study-example-1.html\">ResearchStudy/research-study-example-1</a></p><p><b>individual</b>: <a href=\"Patient-patient-example-2.html\">Patient/patient-example-2</a> " SMITH"</p></div>" + }, + "status" : "on-study", + "study" : { + "reference" : "ResearchStudy/research-study-example-1" + }, + "individual" : { + "reference" : "Patient/patient-example-2" + } } \ No newline at end of file diff --git a/ResearchSubject-research-subject-example-2.json.html b/ResearchSubject-research-subject-example-2.json.html index 0a2b413f..83060ffe 100644 --- a/ResearchSubject-research-subject-example-2.json.html +++ b/ResearchSubject-research-subject-example-2.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -327,7 +327,7 @@ <h2 id="root">: research-subject-example-2 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-example-2.ttl b/ResearchSubject-research-subject-example-2.ttl index e271be58..96e20b5f 100644 --- a/ResearchSubject-research-subject-example-2.ttl +++ b/ResearchSubject-research-subject-example-2.ttl @@ -7,20 +7,20 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ResearchSubject/research-subject-example-2> a fhir:ResearchSubject; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "research-subject-example-2"]; + fhir:Resource.id [ fhir:value "research-subject-example-2"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-example-2\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject "research-subject-example-2" </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-research-study-example-1.html\">ResearchStudy/research-study-example-1</a></p><p><b>individual</b>: <a href=\"Patient-patient-example-2.html\">Patient/patient-example-2</a> " SMITH"</p></div>" - ]; - fhir:ResearchSubject.status [ fhir:value "on-study"]; + ]; # + fhir:ResearchSubject.status [ fhir:value "on-study"]; # fhir:ResearchSubject.study [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/ResearchStudy/research-study-example-1>; fhir:Reference.reference [ fhir:value "ResearchStudy/research-study-example-1" ] - ]; + ]; # fhir:ResearchSubject.individual [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-2>; fhir:Reference.reference [ fhir:value "Patient/patient-example-2" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ResearchSubject-research-subject-example-2.ttl.html b/ResearchSubject-research-subject-example-2.ttl.html index 614eb6fd..288c12f7 100644 --- a/ResearchSubject-research-subject-example-2.ttl.html +++ b/ResearchSubject-research-subject-example-2.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,18 +292,18 @@ <h2 id="root">: research-subject-example-2 - TTL Representation</h2> a fhir:ResearchSubject; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "research-subject-example-2"]; + <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "research-subject-example-2"]; # <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-example-2\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject &quot;research-subject-example-2&quot; </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-research-study-example-1.html\">ResearchStudy/research-study-example-1</a></p><p><b>individual</b>: <a href=\"Patient-patient-example-2.html\">Patient/patient-example-2</a> &quot; SMITH&quot;</p></div>" - ]; - <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.status">fhir:ResearchSubject.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "on-study"]; + ]; # + <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.status">fhir:ResearchSubject.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "on-study"]; # <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.study">fhir:ResearchSubject.study</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ResearchStudy/research-study-example-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.individual">fhir:ResearchSubject.individual</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/patient-example-2" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -341,7 +341,7 @@ <h2 id="root">: research-subject-example-2 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-example-2.xml.html b/ResearchSubject-research-subject-example-2.xml.html index fe5188b7..731de29e 100644 --- a/ResearchSubject-research-subject-example-2.xml.html +++ b/ResearchSubject-research-subject-example-2.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -327,7 +327,7 @@ <h2 id="root">: research-subject-example-2 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-example-3.change.history.html b/ResearchSubject-research-subject-example-3.change.history.html index dad3a4ee..9a7f4f52 100644 --- a/ResearchSubject-research-subject-example-3.change.history.html +++ b/ResearchSubject-research-subject-example-3.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ResearchSubject/research-subject-example-3 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-example-3.html b/ResearchSubject-research-subject-example-3.html index 74a63789..6d41b57d 100644 --- a/ResearchSubject-research-subject-example-3.html +++ b/ResearchSubject-research-subject-example-3.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example ResearchSubject: research-subject-example-3</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-example-3.json b/ResearchSubject-research-subject-example-3.json index 9f787636..d5fedf52 100644 --- a/ResearchSubject-research-subject-example-3.json +++ b/ResearchSubject-research-subject-example-3.json @@ -1,15 +1,15 @@ -{ - "resourceType": "ResearchSubject", - "id": "research-subject-example-3", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-example-3\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject "research-subject-example-3" </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-research-study-example-1.html\">ResearchStudy/research-study-example-1</a></p><p><b>individual</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> " SMITH"</p></div>" - }, - "status": "on-study", - "study": { - "reference": "ResearchStudy/research-study-example-1" - }, - "individual": { - "reference": "Patient/patient-example-3" - } +{ + "resourceType" : "ResearchSubject", + "id" : "research-subject-example-3", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-example-3\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject "research-subject-example-3" </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-research-study-example-1.html\">ResearchStudy/research-study-example-1</a></p><p><b>individual</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> " SMITH"</p></div>" + }, + "status" : "on-study", + "study" : { + "reference" : "ResearchStudy/research-study-example-1" + }, + "individual" : { + "reference" : "Patient/patient-example-3" + } } \ No newline at end of file diff --git a/ResearchSubject-research-subject-example-3.json.html b/ResearchSubject-research-subject-example-3.json.html index 05e3482d..a7176cbf 100644 --- a/ResearchSubject-research-subject-example-3.json.html +++ b/ResearchSubject-research-subject-example-3.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -327,7 +327,7 @@ <h2 id="root">: research-subject-example-3 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-example-3.ttl b/ResearchSubject-research-subject-example-3.ttl index 0f0e9f1a..0f9ac4c6 100644 --- a/ResearchSubject-research-subject-example-3.ttl +++ b/ResearchSubject-research-subject-example-3.ttl @@ -7,20 +7,20 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ResearchSubject/research-subject-example-3> a fhir:ResearchSubject; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "research-subject-example-3"]; + fhir:Resource.id [ fhir:value "research-subject-example-3"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-example-3\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject "research-subject-example-3" </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-research-study-example-1.html\">ResearchStudy/research-study-example-1</a></p><p><b>individual</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> " SMITH"</p></div>" - ]; - fhir:ResearchSubject.status [ fhir:value "on-study"]; + ]; # + fhir:ResearchSubject.status [ fhir:value "on-study"]; # fhir:ResearchSubject.study [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/ResearchStudy/research-study-example-1>; fhir:Reference.reference [ fhir:value "ResearchStudy/research-study-example-1" ] - ]; + ]; # fhir:ResearchSubject.individual [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-3>; fhir:Reference.reference [ fhir:value "Patient/patient-example-3" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ResearchSubject-research-subject-example-3.ttl.html b/ResearchSubject-research-subject-example-3.ttl.html index 44584205..85586a23 100644 --- a/ResearchSubject-research-subject-example-3.ttl.html +++ b/ResearchSubject-research-subject-example-3.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,18 +292,18 @@ <h2 id="root">: research-subject-example-3 - TTL Representation</h2> a fhir:ResearchSubject; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "research-subject-example-3"]; + <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "research-subject-example-3"]; # <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-example-3\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject &quot;research-subject-example-3&quot; </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-research-study-example-1.html\">ResearchStudy/research-study-example-1</a></p><p><b>individual</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> &quot; SMITH&quot;</p></div>" - ]; - <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.status">fhir:ResearchSubject.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "on-study"]; + ]; # + <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.status">fhir:ResearchSubject.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "on-study"]; # <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.study">fhir:ResearchSubject.study</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ResearchStudy/research-study-example-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.individual">fhir:ResearchSubject.individual</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/patient-example-3" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -341,7 +341,7 @@ <h2 id="root">: research-subject-example-3 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-example-3.xml.html b/ResearchSubject-research-subject-example-3.xml.html index 8e91b1aa..e031cd27 100644 --- a/ResearchSubject-research-subject-example-3.xml.html +++ b/ResearchSubject-research-subject-example-3.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -327,7 +327,7 @@ <h2 id="root">: research-subject-example-3 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-study-01-patient-01.change.history.html b/ResearchSubject-research-subject-study-01-patient-01.change.history.html index 4b893a29..149a5845 100644 --- a/ResearchSubject-research-subject-study-01-patient-01.change.history.html +++ b/ResearchSubject-research-subject-study-01-patient-01.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ResearchSubject/research-subject-study-01-patient-01 - Change Hi <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-study-01-patient-01.html b/ResearchSubject-research-subject-study-01-patient-01.html index dc847e45..eaaafd3b 100644 --- a/ResearchSubject-research-subject-study-01-patient-01.html +++ b/ResearchSubject-research-subject-study-01-patient-01.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example ResearchSubject: research-subject-study-01-patient-01</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-study-01-patient-01.json b/ResearchSubject-research-subject-study-01-patient-01.json index 031722fc..f0f901b0 100644 --- a/ResearchSubject-research-subject-study-01-patient-01.json +++ b/ResearchSubject-research-subject-study-01-patient-01.json @@ -1,15 +1,15 @@ -{ - "resourceType": "ResearchSubject", - "id": "research-subject-study-01-patient-01", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-study-01-patient-01\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject "research-subject-study-01-patient-01" </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-ncpi-research-study-01.html\">ResearchStudy/ncpi-research-study-01</a></p><p><b>individual</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p></div>" - }, - "status": "on-study", - "study": { - "reference": "ResearchStudy/ncpi-research-study-01" - }, - "individual": { - "reference": "Patient/ncpi-research-study-01-patient-01" - } +{ + "resourceType" : "ResearchSubject", + "id" : "research-subject-study-01-patient-01", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-study-01-patient-01\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject "research-subject-study-01-patient-01" </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-ncpi-research-study-01.html\">ResearchStudy/ncpi-research-study-01</a></p><p><b>individual</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p></div>" + }, + "status" : "on-study", + "study" : { + "reference" : "ResearchStudy/ncpi-research-study-01" + }, + "individual" : { + "reference" : "Patient/ncpi-research-study-01-patient-01" + } } \ No newline at end of file diff --git a/ResearchSubject-research-subject-study-01-patient-01.json.html b/ResearchSubject-research-subject-study-01-patient-01.json.html index 3222390b..9516be79 100644 --- a/ResearchSubject-research-subject-study-01-patient-01.json.html +++ b/ResearchSubject-research-subject-study-01-patient-01.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -327,7 +327,7 @@ <h2 id="root">: research-subject-study-01-patient-01 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-study-01-patient-01.ttl b/ResearchSubject-research-subject-study-01-patient-01.ttl index b9f0d894..64ba7c27 100644 --- a/ResearchSubject-research-subject-study-01-patient-01.ttl +++ b/ResearchSubject-research-subject-study-01-patient-01.ttl @@ -7,20 +7,20 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ResearchSubject/research-subject-study-01-patient-01> a fhir:ResearchSubject; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "research-subject-study-01-patient-01"]; + fhir:Resource.id [ fhir:value "research-subject-study-01-patient-01"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-study-01-patient-01\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject "research-subject-study-01-patient-01" </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-ncpi-research-study-01.html\">ResearchStudy/ncpi-research-study-01</a></p><p><b>individual</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p></div>" - ]; - fhir:ResearchSubject.status [ fhir:value "on-study"]; + ]; # + fhir:ResearchSubject.status [ fhir:value "on-study"]; # fhir:ResearchSubject.study [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/ResearchStudy/ncpi-research-study-01>; fhir:Reference.reference [ fhir:value "ResearchStudy/ncpi-research-study-01" ] - ]; + ]; # fhir:ResearchSubject.individual [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/ncpi-research-study-01-patient-01>; fhir:Reference.reference [ fhir:value "Patient/ncpi-research-study-01-patient-01" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ResearchSubject-research-subject-study-01-patient-01.ttl.html b/ResearchSubject-research-subject-study-01-patient-01.ttl.html index f30b7bdd..0166f5b3 100644 --- a/ResearchSubject-research-subject-study-01-patient-01.ttl.html +++ b/ResearchSubject-research-subject-study-01-patient-01.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,18 +292,18 @@ <h2 id="root">: research-subject-study-01-patient-01 - TTL Representation</h2> a fhir:ResearchSubject; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "research-subject-study-01-patient-01"]; + <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "research-subject-study-01-patient-01"]; # <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-study-01-patient-01\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject &quot;research-subject-study-01-patient-01&quot; </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-ncpi-research-study-01.html\">ResearchStudy/ncpi-research-study-01</a></p><p><b>individual</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p></div>" - ]; - <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.status">fhir:ResearchSubject.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "on-study"]; + ]; # + <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.status">fhir:ResearchSubject.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "on-study"]; # <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.study">fhir:ResearchSubject.study</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ResearchStudy/ncpi-research-study-01" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.individual">fhir:ResearchSubject.individual</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/ncpi-research-study-01-patient-01" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -341,7 +341,7 @@ <h2 id="root">: research-subject-study-01-patient-01 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-study-01-patient-01.xml.html b/ResearchSubject-research-subject-study-01-patient-01.xml.html index c6426f69..4e013a6a 100644 --- a/ResearchSubject-research-subject-study-01-patient-01.xml.html +++ b/ResearchSubject-research-subject-study-01-patient-01.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -327,7 +327,7 @@ <h2 id="root">: research-subject-study-01-patient-01 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-study-01-patient-02.change.history.html b/ResearchSubject-research-subject-study-01-patient-02.change.history.html index 15a98ad9..537388b3 100644 --- a/ResearchSubject-research-subject-study-01-patient-02.change.history.html +++ b/ResearchSubject-research-subject-study-01-patient-02.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ResearchSubject/research-subject-study-01-patient-02 - Change Hi <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-study-01-patient-02.html b/ResearchSubject-research-subject-study-01-patient-02.html index 8b347e7f..bef9f854 100644 --- a/ResearchSubject-research-subject-study-01-patient-02.html +++ b/ResearchSubject-research-subject-study-01-patient-02.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example ResearchSubject: research-subject-study-01-patient-02</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-study-01-patient-02.json b/ResearchSubject-research-subject-study-01-patient-02.json index 23ecdf24..2afd2bb0 100644 --- a/ResearchSubject-research-subject-study-01-patient-02.json +++ b/ResearchSubject-research-subject-study-01-patient-02.json @@ -1,15 +1,15 @@ -{ - "resourceType": "ResearchSubject", - "id": "research-subject-study-01-patient-02", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-study-01-patient-02\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject "research-subject-study-01-patient-02" </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-ncpi-research-study-01.html\">ResearchStudy/ncpi-research-study-01</a></p><p><b>individual</b>: <a href=\"Patient-ncpi-research-study-01-patient-02.html\">Patient/ncpi-research-study-01-patient-02</a></p></div>" - }, - "status": "on-study", - "study": { - "reference": "ResearchStudy/ncpi-research-study-01" - }, - "individual": { - "reference": "Patient/ncpi-research-study-01-patient-02" - } +{ + "resourceType" : "ResearchSubject", + "id" : "research-subject-study-01-patient-02", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-study-01-patient-02\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject "research-subject-study-01-patient-02" </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-ncpi-research-study-01.html\">ResearchStudy/ncpi-research-study-01</a></p><p><b>individual</b>: <a href=\"Patient-ncpi-research-study-01-patient-02.html\">Patient/ncpi-research-study-01-patient-02</a></p></div>" + }, + "status" : "on-study", + "study" : { + "reference" : "ResearchStudy/ncpi-research-study-01" + }, + "individual" : { + "reference" : "Patient/ncpi-research-study-01-patient-02" + } } \ No newline at end of file diff --git a/ResearchSubject-research-subject-study-01-patient-02.json.html b/ResearchSubject-research-subject-study-01-patient-02.json.html index 1502b41a..09f88f67 100644 --- a/ResearchSubject-research-subject-study-01-patient-02.json.html +++ b/ResearchSubject-research-subject-study-01-patient-02.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -327,7 +327,7 @@ <h2 id="root">: research-subject-study-01-patient-02 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-study-01-patient-02.ttl b/ResearchSubject-research-subject-study-01-patient-02.ttl index 6bdeb141..c7893eb2 100644 --- a/ResearchSubject-research-subject-study-01-patient-02.ttl +++ b/ResearchSubject-research-subject-study-01-patient-02.ttl @@ -7,20 +7,20 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ResearchSubject/research-subject-study-01-patient-02> a fhir:ResearchSubject; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "research-subject-study-01-patient-02"]; + fhir:Resource.id [ fhir:value "research-subject-study-01-patient-02"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-study-01-patient-02\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject "research-subject-study-01-patient-02" </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-ncpi-research-study-01.html\">ResearchStudy/ncpi-research-study-01</a></p><p><b>individual</b>: <a href=\"Patient-ncpi-research-study-01-patient-02.html\">Patient/ncpi-research-study-01-patient-02</a></p></div>" - ]; - fhir:ResearchSubject.status [ fhir:value "on-study"]; + ]; # + fhir:ResearchSubject.status [ fhir:value "on-study"]; # fhir:ResearchSubject.study [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/ResearchStudy/ncpi-research-study-01>; fhir:Reference.reference [ fhir:value "ResearchStudy/ncpi-research-study-01" ] - ]; + ]; # fhir:ResearchSubject.individual [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/ncpi-research-study-01-patient-02>; fhir:Reference.reference [ fhir:value "Patient/ncpi-research-study-01-patient-02" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ResearchSubject-research-subject-study-01-patient-02.ttl.html b/ResearchSubject-research-subject-study-01-patient-02.ttl.html index b61371e2..55b012a0 100644 --- a/ResearchSubject-research-subject-study-01-patient-02.ttl.html +++ b/ResearchSubject-research-subject-study-01-patient-02.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,18 +292,18 @@ <h2 id="root">: research-subject-study-01-patient-02 - TTL Representation</h2> a fhir:ResearchSubject; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "research-subject-study-01-patient-02"]; + <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "research-subject-study-01-patient-02"]; # <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ResearchSubject</b><a name=\"research-subject-study-01-patient-02\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ResearchSubject &quot;research-subject-study-01-patient-02&quot; </p></div><p><b>status</b>: on-study</p><p><b>study</b>: <a href=\"ResearchStudy-ncpi-research-study-01.html\">ResearchStudy/ncpi-research-study-01</a></p><p><b>individual</b>: <a href=\"Patient-ncpi-research-study-01-patient-02.html\">Patient/ncpi-research-study-01-patient-02</a></p></div>" - ]; - <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.status">fhir:ResearchSubject.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "on-study"]; + ]; # + <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.status">fhir:ResearchSubject.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "on-study"]; # <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.study">fhir:ResearchSubject.study</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ResearchStudy/ncpi-research-study-01" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/researchsubject.html#ResearchSubject.individual">fhir:ResearchSubject.individual</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/ncpi-research-study-01-patient-02" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -341,7 +341,7 @@ <h2 id="root">: research-subject-study-01-patient-02 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ResearchSubject-research-subject-study-01-patient-02.xml.html b/ResearchSubject-research-subject-study-01-patient-02.xml.html index 06e6d67b..165fc1ee 100644 --- a/ResearchSubject-research-subject-study-01-patient-02.xml.html +++ b/ResearchSubject-research-subject-study-01-patient-02.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -327,7 +327,7 @@ <h2 id="root">: research-subject-study-01-patient-02 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Specimen-ncpi-research-study-01-specimen-01.change.history.html b/Specimen-ncpi-research-study-01-specimen-01.change.history.html index c9ee2451..394d26fb 100644 --- a/Specimen-ncpi-research-study-01-specimen-01.change.history.html +++ b/Specimen-ncpi-research-study-01-specimen-01.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Specimen/ncpi-research-study-01-specimen-01 - Change History</h2 <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Specimen-ncpi-research-study-01-specimen-01.html b/Specimen-ncpi-research-study-01-specimen-01.html index ae0b296c..9be1c1a1 100644 --- a/Specimen-ncpi-research-study-01-specimen-01.html +++ b/Specimen-ncpi-research-study-01-specimen-01.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Specimen: NCPI Research Study 01 Specimen 01</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Specimen-ncpi-research-study-01-specimen-01.json b/Specimen-ncpi-research-study-01-specimen-01.json index f1cd172e..2d6e2019 100644 --- a/Specimen-ncpi-research-study-01-specimen-01.json +++ b/Specimen-ncpi-research-study-01-specimen-01.json @@ -1,21 +1,19 @@ -{ - "resourceType": "Specimen", - "id": "ncpi-research-study-01-specimen-01", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Specimen</b><a name=\"ncpi-research-study-01-specimen-01\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Specimen "ncpi-research-study-01-specimen-01" </p></div><p><b>status</b>: available</p><p><b>type</b>: Blood Sample <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncit.html\">NCI Thesaurus</a>#C17610)</span></p><p><b>subject</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p></div>" - }, - "status": "available", - "type": { - "coding": [ - { - "system": "http://purl.obolibrary.org/obo/ncit.owl", - "code": "C17610", - "display": "Blood Sample" - } - ] - }, - "subject": { - "reference": "Patient/ncpi-research-study-01-patient-01" - } +{ + "resourceType" : "Specimen", + "id" : "ncpi-research-study-01-specimen-01", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Specimen</b><a name=\"ncpi-research-study-01-specimen-01\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Specimen "ncpi-research-study-01-specimen-01" </p></div><p><b>status</b>: available</p><p><b>type</b>: Blood Sample <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncit.html\">NCI Thesaurus</a>#C17610)</span></p><p><b>subject</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p></div>" + }, + "status" : "available", + "type" : { + "coding" : [{ + "system" : "http://purl.obolibrary.org/obo/ncit.owl", + "code" : "C17610", + "display" : "Blood Sample" + }] + }, + "subject" : { + "reference" : "Patient/ncpi-research-study-01-patient-01" + } } \ No newline at end of file diff --git a/Specimen-ncpi-research-study-01-specimen-01.json.html b/Specimen-ncpi-research-study-01-specimen-01.json.html index dbe07e27..3aad710b 100644 --- a/Specimen-ncpi-research-study-01-specimen-01.json.html +++ b/Specimen-ncpi-research-study-01-specimen-01.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -333,7 +333,7 @@ <h2 id="root">: NCPI Research Study 01 Specimen 01 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Specimen-ncpi-research-study-01-specimen-01.ttl b/Specimen-ncpi-research-study-01-specimen-01.ttl index ab6fa37c..c273ab03 100644 --- a/Specimen-ncpi-research-study-01-specimen-01.ttl +++ b/Specimen-ncpi-research-study-01-specimen-01.ttl @@ -7,12 +7,12 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Specimen/ncpi-research-study-01-specimen-01> a fhir:Specimen; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "ncpi-research-study-01-specimen-01"]; + fhir:Resource.id [ fhir:value "ncpi-research-study-01-specimen-01"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Specimen</b><a name=\"ncpi-research-study-01-specimen-01\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Specimen "ncpi-research-study-01-specimen-01" </p></div><p><b>status</b>: available</p><p><b>type</b>: Blood Sample <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncit.html\">NCI Thesaurus</a>#C17610)</span></p><p><b>subject</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p></div>" - ]; - fhir:Specimen.status [ fhir:value "available"]; + ]; # + fhir:Specimen.status [ fhir:value "available"]; # fhir:Specimen.type [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -20,11 +20,11 @@ fhir:Coding.code [ fhir:value "C17610" ]; fhir:Coding.display [ fhir:value "Blood Sample" ] ] - ]; + ]; # fhir:Specimen.subject [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/ncpi-research-study-01-patient-01>; fhir:Reference.reference [ fhir:value "Patient/ncpi-research-study-01-patient-01" ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Specimen-ncpi-research-study-01-specimen-01.ttl.html b/Specimen-ncpi-research-study-01-specimen-01.ttl.html index fbd87efe..76972b55 100644 --- a/Specimen-ncpi-research-study-01-specimen-01.ttl.html +++ b/Specimen-ncpi-research-study-01-specimen-01.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,22 +292,22 @@ <h2 id="root">: NCPI Research Study 01 Specimen 01 - TTL Representation</h2> a fhir:Specimen; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/specimen.html#Specimen.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-research-study-01-specimen-01"]; + <a href="http://hl7.org/fhir/R4/specimen.html#Specimen.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-research-study-01-specimen-01"]; # <a href="http://hl7.org/fhir/R4/specimen.html#Specimen.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Specimen</b><a name=\"ncpi-research-study-01-specimen-01\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Specimen &quot;ncpi-research-study-01-specimen-01&quot; </p></div><p><b>status</b>: available</p><p><b>type</b>: Blood Sample <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-ncit.html\">NCI Thesaurus</a>#C17610)</span></p><p><b>subject</b>: <a href=\"Patient-ncpi-research-study-01-patient-01.html\">Patient/ncpi-research-study-01-patient-01</a></p></div>" - ]; - <a href="http://hl7.org/fhir/R4/specimen.html#Specimen.status">fhir:Specimen.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "available"]; + ]; # + <a href="http://hl7.org/fhir/R4/specimen.html#Specimen.status">fhir:Specimen.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "available"]; # <a href="http://hl7.org/fhir/R4/specimen.html#Specimen.type">fhir:Specimen.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://purl.obolibrary.org/obo/ncit.owl" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "C17610" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Blood Sample" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/specimen.html#Specimen.subject">fhir:Specimen.subject</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/ncpi-research-study-01-patient-01" ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -345,7 +345,7 @@ <h2 id="root">: NCPI Research Study 01 Specimen 01 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Specimen-ncpi-research-study-01-specimen-01.xml.html b/Specimen-ncpi-research-study-01-specimen-01.xml.html index b1dcdca2..49955cd4 100644 --- a/Specimen-ncpi-research-study-01-specimen-01.xml.html +++ b/Specimen-ncpi-research-study-01-specimen-01.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -331,7 +331,7 @@ <h2 id="root">: NCPI Research Study 01 Specimen 01 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Specimen-specimen-example-1.change.history.html b/Specimen-specimen-example-1.change.history.html index dab35d56..e51ecf6d 100644 --- a/Specimen-specimen-example-1.change.history.html +++ b/Specimen-specimen-example-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Specimen/specimen-example-1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Specimen-specimen-example-1.html b/Specimen-specimen-example-1.html index db6faa15..40427473 100644 --- a/Specimen-specimen-example-1.html +++ b/Specimen-specimen-example-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Specimen: specimen-example-1</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Specimen-specimen-example-1.json b/Specimen-specimen-example-1.json index b3786a31..4904bf2c 100644 --- a/Specimen-specimen-example-1.json +++ b/Specimen-specimen-example-1.json @@ -1,112 +1,98 @@ -{ - "resourceType": "Specimen", - "id": "specimen-example-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Specimen</b><a name=\"specimen-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Specimen "specimen-example-1" </p></div><p><b>type</b>: Solid Tissue <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html\">specimenType</a>#TISS "Tissue")</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>receivedTime</b>: </p><h3>Collections</h3><table class=\"grid\"><tr><td>-</td><td><b>Collected[x]</b></td><td><b>Quantity</b></td><td><b>Method</b></td><td><b>BodySite</b></td></tr><tr><td>*</td><td/><td>50 uL<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code uL = 'uL')</span></td><td>Biopsy <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#129314006 "Biopsy - action")</span></td><td>Central Nervous System <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#21483005 "Structure of central nervous system")</span></td></tr></table></div>" - }, - "type": { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/v2-0487", - "code": "TISS", - "display": "Tissue" - } - ], - "text": "Solid Tissue" - }, - "subject": { - "reference": "Patient/patient-example-1" - }, - "_receivedTime": { - "extension": [ - { - "extension": [ - { - "url": "target", - "valueReference": { - "reference": "Patient/patient-example-1" - } - }, - { - "url": "targetPath", - "valueString": "birthDate" - }, - { - "url": "relationship", - "valueCode": "after" - }, - { - "url": "offset", - "valueDuration": { - "value": 366, - "unit": "d", - "system": "http://unitsofmeasure.org", - "code": "days" - } - } - ], - "url": "http://hl7.org/fhir/StructureDefinition/cqf-relativeDateTime" - } - ] - }, - "collection": { - "_collectedDateTime": { - "extension": [ - { - "extension": [ - { - "url": "target", - "valueReference": { - "reference": "Patient/patient-example-1" - } - }, - { - "url": "targetPath", - "valueString": "birthDate" - }, - { - "url": "relationship", - "valueCode": "after" - }, - { - "url": "offset", - "valueDuration": { - "value": 366, - "unit": "d", - "system": "http://unitsofmeasure.org", - "code": "days" - } - } - ], - "url": "http://hl7.org/fhir/StructureDefinition/cqf-relativeDateTime" - } - ] - }, - "quantity": { - "value": 50, - "system": "http://unitsofmeasure.org", - "code": "uL" - }, - "method": { - "coding": [ - { - "system": "http://snomed.info/sct", - "code": "129314006", - "display": "Biopsy - action" - } - ], - "text": "Biopsy" - }, - "bodySite": { - "coding": [ - { - "system": "http://snomed.info/sct", - "code": "21483005", - "display": "Structure of central nervous system" - } - ], - "text": "Central Nervous System" - } - } +{ + "resourceType" : "Specimen", + "id" : "specimen-example-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Specimen</b><a name=\"specimen-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Specimen "specimen-example-1" </p></div><p><b>type</b>: Solid Tissue <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html\">specimenType</a>#TISS "Tissue")</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>receivedTime</b>: </p><h3>Collections</h3><table class=\"grid\"><tr><td>-</td><td><b>Collected[x]</b></td><td><b>Quantity</b></td><td><b>Method</b></td><td><b>BodySite</b></td></tr><tr><td>*</td><td/><td>50 uL<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code uL = 'uL')</span></td><td>Biopsy <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#129314006 "Biopsy - action")</span></td><td>Central Nervous System <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#21483005 "Structure of central nervous system")</span></td></tr></table></div>" + }, + "type" : { + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/v2-0487", + "code" : "TISS", + "display" : "Tissue" + }], + "text" : "Solid Tissue" + }, + "subject" : { + "reference" : "Patient/patient-example-1" + }, + "_receivedTime" : { + "extension" : [{ + "extension" : [{ + "url" : "target", + "valueReference" : { + "reference" : "Patient/patient-example-1" + } + }, + { + "url" : "targetPath", + "valueString" : "birthDate" + }, + { + "url" : "relationship", + "valueCode" : "after" + }, + { + "url" : "offset", + "valueDuration" : { + "value" : 366, + "unit" : "d", + "system" : "http://unitsofmeasure.org", + "code" : "days" + } + }], + "url" : "http://hl7.org/fhir/StructureDefinition/cqf-relativeDateTime" + }] + }, + "collection" : { + "_collectedDateTime" : { + "extension" : [{ + "extension" : [{ + "url" : "target", + "valueReference" : { + "reference" : "Patient/patient-example-1" + } + }, + { + "url" : "targetPath", + "valueString" : "birthDate" + }, + { + "url" : "relationship", + "valueCode" : "after" + }, + { + "url" : "offset", + "valueDuration" : { + "value" : 366, + "unit" : "d", + "system" : "http://unitsofmeasure.org", + "code" : "days" + } + }], + "url" : "http://hl7.org/fhir/StructureDefinition/cqf-relativeDateTime" + }] + }, + "quantity" : { + "value" : 50, + "system" : "http://unitsofmeasure.org", + "code" : "uL" + }, + "method" : { + "coding" : [{ + "system" : "http://snomed.info/sct", + "code" : "129314006", + "display" : "Biopsy - action" + }], + "text" : "Biopsy" + }, + "bodySite" : { + "coding" : [{ + "system" : "http://snomed.info/sct", + "code" : "21483005", + "display" : "Structure of central nervous system" + }], + "text" : "Central Nervous System" + } + } } \ No newline at end of file diff --git a/Specimen-specimen-example-1.json.html b/Specimen-specimen-example-1.json.html index 5eb06487..8a5113cb 100644 --- a/Specimen-specimen-example-1.json.html +++ b/Specimen-specimen-example-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -424,7 +424,7 @@ <h2 id="root">: specimen-example-1 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Specimen-specimen-example-1.ttl b/Specimen-specimen-example-1.ttl index 4504d092..ff843c0e 100644 --- a/Specimen-specimen-example-1.ttl +++ b/Specimen-specimen-example-1.ttl @@ -8,11 +8,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Specimen/specimen-example-1> a fhir:Specimen; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "specimen-example-1"]; + fhir:Resource.id [ fhir:value "specimen-example-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Specimen</b><a name=\"specimen-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Specimen "specimen-example-1" </p></div><p><b>type</b>: Solid Tissue <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html\">specimenType</a>#TISS "Tissue")</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> " SMITH"</p><p><b>receivedTime</b>: </p><h3>Collections</h3><table class=\"grid\"><tr><td>-</td><td><b>Collected[x]</b></td><td><b>Quantity</b></td><td><b>Method</b></td><td><b>BodySite</b></td></tr><tr><td>*</td><td/><td>50 uL<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code uL = 'uL')</span></td><td>Biopsy <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#129314006 "Biopsy - action")</span></td><td>Central Nervous System <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#21483005 "Structure of central nervous system")</span></td></tr></table></div>" - ]; + ]; # fhir:Specimen.type [ fhir:CodeableConcept.coding [ fhir:index 0; @@ -21,11 +21,11 @@ fhir:Coding.display [ fhir:value "Tissue" ] ]; fhir:CodeableConcept.text [ fhir:value "Solid Tissue" ] - ]; + ]; # fhir:Specimen.subject [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-1>; fhir:Reference.reference [ fhir:value "Patient/patient-example-1" ] - ]; + ]; # fhir:Specimen.receivedTime [ fhir:Element.extension [ fhir:index 0; @@ -56,7 +56,7 @@ ]; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/cqf-relativeDateTime" ] ] - ]; + ]; # fhir:Specimen.collection [ fhir:Specimen.collection.collectedDateTime [ fhir:Element.extension [ @@ -114,7 +114,7 @@ ]; fhir:CodeableConcept.text [ fhir:value "Central Nervous System" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Specimen-specimen-example-1.ttl.html b/Specimen-specimen-example-1.ttl.html index 676b91d3..02554e83 100644 --- a/Specimen-specimen-example-1.ttl.html +++ b/Specimen-specimen-example-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -293,11 +293,11 @@ <h2 id="root">: specimen-example-1 - TTL Representation</h2> a fhir:Specimen; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/specimen.html#Specimen.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "specimen-example-1"]; + <a href="http://hl7.org/fhir/R4/specimen.html#Specimen.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "specimen-example-1"]; # <a href="http://hl7.org/fhir/R4/specimen.html#Specimen.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Specimen</b><a name=\"specimen-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Specimen &quot;specimen-example-1&quot; </p></div><p><b>type</b>: Solid Tissue <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html\">specimenType</a>#TISS &quot;Tissue&quot;)</span></p><p><b>subject</b>: <a href=\"Patient-patient-example-1.html\">Patient/patient-example-1</a> &quot; SMITH&quot;</p><p><b>receivedTime</b>: </p><h3>Collections</h3><table class=\"grid\"><tr><td>-</td><td><b>Collected[x]</b></td><td><b>Quantity</b></td><td><b>Method</b></td><td><b>BodySite</b></td></tr><tr><td>*</td><td/><td>50 uL<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code uL = 'uL')</span></td><td>Biopsy <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#129314006 &quot;Biopsy - action&quot;)</span></td><td>Central Nervous System <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#21483005 &quot;Structure of central nervous system&quot;)</span></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/specimen.html#Specimen.type">fhir:Specimen.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -305,10 +305,10 @@ <h2 id="root">: specimen-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "TISS" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Tissue" ] ]; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.text">fhir:CodeableConcept.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Solid Tissue" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/specimen.html#Specimen.subject">fhir:Specimen.subject</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/patient-example-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/specimen.html#Specimen.receivedTime">fhir:Specimen.receivedTime</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime#dateTime.extension">fhir:Element.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -331,7 +331,7 @@ <h2 id="root">: specimen-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Duration#Duration.system">fhir:Quantity.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://unitsofmeasure.org" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Duration#Duration.code">fhir:Quantity.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "days" ] ] ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/cqf-relativeDateTime" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/specimen.html#Specimen.collection">fhir:Specimen.collection</a> [ <a href="http://hl7.org/fhir/R4/specimen.html#Specimen.collection.collected[x]">fhir:Specimen.collection.collectedDateTime</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime#dateTime.extension">fhir:Element.extension</a> [ @@ -375,7 +375,7 @@ <h2 id="root">: specimen-example-1 - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "21483005" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.display">fhir:Coding.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Structure of central nervous system" ] ]; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.text">fhir:CodeableConcept.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Central Nervous System" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -413,7 +413,7 @@ <h2 id="root">: specimen-example-1 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Specimen-specimen-example-1.xml.html b/Specimen-specimen-example-1.xml.html index f32ed6d7..440e488c 100644 --- a/Specimen-specimen-example-1.xml.html +++ b/Specimen-specimen-example-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -402,7 +402,7 @@ <h2 id="root">: specimen-example-1 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-disease-definitions.html b/StructureDefinition-disease-definitions.html index f49d1995..7c4499c4 100644 --- a/StructureDefinition-disease-definitions.html +++ b/StructureDefinition-disease-definitions.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -327,7 +327,8 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> </ul> <a name="tabs-diff"> </a> <div id="tabs-diff"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Condition"> </a><span style="color: grey">1.</span> <b>Condition</b><a href="#diff_Condition" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Condition.code"> </a><span style="color: grey">2.</span> <b>Condition.code</b><a href="#diff_Condition.code" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/terminologies.html">Binding</a></td><td>The codes SHALL be taken from <a href="ValueSet-disease-codes.html">Disease Codes</a>; other codes may be used where these codes are not suitable<span style='color:DarkGray;text-decoration:line-through'>For example codes, see <a href="http://hl7.org/fhir/R4/valueset-condition-code.html">Condition/Problem/DiagnosisCodes</a></span></td></tr> @@ -336,7 +337,8 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> </div> <a name="tabs-key"> </a> <div id="tabs-key"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="key_Condition"> </a><span style="color: grey">1.</span> <b>Condition</b><a href="#key_Condition" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><span style='color:DarkGray'><p>A clinical condition, problem, diagnosis, or other event, situation, issue, or clinical concept that has risen to a level of concern.</p> </span></td></tr> @@ -407,7 +409,7 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> <tr><td>Definition</td><td><span style='color:DarkGray'><p>Indicates the patient or group who the condition record is associated with.</p> </span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td><span style='color:DarkGray'>1</span>..<span style='color:DarkGray'>1</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>)</td></tr> <tr><td>Requirements</td><td><span style='color:DarkGray'><p>Group is typically used for veterinary or public health use cases.</p> </span></td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td><span style='color:DarkGray'>patient</span></td></tr> @@ -418,7 +420,8 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> </div> <a name="tabs-snap"> </a> <div id="tabs-snap"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Condition"> </a><span style="color: grey">1.</span> <b>Condition</b><a href="#Condition" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>A clinical condition, problem, diagnosis, or other event, situation, issue, or clinical concept that has risen to a level of concern.</p> </td></tr> @@ -464,7 +467,7 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#Narrative">Narrative</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrativehtmlxhtmldisplay</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrative, html, xhtml, display</td></tr> <tr><td>Comments</td><td><p>Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a "text blob" or where text is additionally entered raw or narrated and encoded information is added later.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -474,7 +477,7 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/resource.html">Resource</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resourcesanonymous resourcescontained resources</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resources, anonymous resources, contained resources</td></tr> <tr><td>Comments</td><td><p>This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Condition.extension"> </a><span style="color: grey">8.</span> <b>Condition.extension</b><a href="#Condition.extension" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -482,7 +485,7 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -496,7 +499,7 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -516,7 +519,7 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Condition.clinicalStatus"> </a><span style="color: grey">11.</span> <b>Condition.clinicalStatus</b><a href="#Condition.clinicalStatus" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>The clinical status of the condition.</p> </td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1 This element is affected by the following invariants: con-3con-4con-5</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1 This element is affected by the following invariants: con-3, con-4, con-5</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/terminologies.html">Binding</a></td><td>The codes SHALL be taken from <a href="http://hl7.org/fhir/R4/valueset-condition-clinical.html">ConditionClinicalStatusCodes</a> The clinical status of the condition or diagnosis </td></tr> @@ -529,7 +532,7 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Condition.verificationStatus"> </a><span style="color: grey">12.</span> <b>Condition.verificationStatus</b><a href="#Condition.verificationStatus" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>The verification status to support the clinical status of the condition.</p> </td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1 This element is affected by the following invariants: con-3con-5</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1 This element is affected by the following invariants: con-3, con-5</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/terminologies.html">Binding</a></td><td>The codes SHALL be taken from <a href="http://hl7.org/fhir/R4/valueset-condition-ver-status.html">ConditionVerificationStatus</a> The verification status to support or decline the clinical status of the condition or diagnosis </td></tr> @@ -591,7 +594,7 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Indicates the patient or group who the condition record is associated with.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a>)</td></tr> <tr><td>Requirements</td><td><p>Group is typically used for veterinary or public health use cases.</p> </td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>patient</td></tr> @@ -601,7 +604,7 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The Encounter during which this Condition was created or to which the creation of this record is tightly associated.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html" title="http://hl7.org/fhir/StructureDefinition/Encounter">Encounter</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html" title="http://hl7.org/fhir/StructureDefinition/Encounter">Encounter</a>)</td></tr> <tr><td>Comments</td><td><p>This will typically be the encounter the event occurred within, but some activities may be initiated prior to or after the official completion of an encounter but still be tied to the context of the encounter. This record indicates the encounter this particular record is associated with. In the case of a "new" diagnosis reflecting ongoing/revised information about the condition, this might be distinct from the first encounter in which the underlying condition was first "known".</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -637,14 +640,14 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Individual who recorded the record and takes responsibility for its content.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a><a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a>|<a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a>|<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Condition.asserter"> </a><span style="color: grey">23.</span> <b>Condition.asserter</b><a href="#Condition.asserter" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>Individual who is making the condition statement.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a><a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a>|<a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a>|<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Condition.stage"> </a><span style="color: grey">24.</span> <b>Condition.stage</b><a href="#Condition.stage" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -665,7 +668,7 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -679,7 +682,7 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -698,7 +701,7 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Reference to a formal record of the evidence on which the staging assessment is based.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..* This element is affected by the following invariants: con-1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/clinicalimpression.html" title="http://hl7.org/fhir/StructureDefinition/ClinicalImpression">ClinicalImpression</a><a href="http://hl7.org/fhir/R4/diagnosticreport.html" title="http://hl7.org/fhir/StructureDefinition/DiagnosticReport">DiagnosticReport</a><a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/clinicalimpression.html" title="http://hl7.org/fhir/StructureDefinition/ClinicalImpression">ClinicalImpression</a>|<a href="http://hl7.org/fhir/R4/diagnosticreport.html" title="http://hl7.org/fhir/StructureDefinition/DiagnosticReport">DiagnosticReport</a>|<a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Condition.stage.type"> </a><span style="color: grey">30.</span> <b>Condition.stage.type</b><a href="#Condition.stage.type" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -731,7 +734,7 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -745,7 +748,7 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -764,7 +767,7 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Links to other relevant information, including pathology reports.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..* This element is affected by the following invariants: con-2</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Condition.note"> </a><span style="color: grey">37.</span> <b>Condition.note</b><a href="#Condition.note" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -830,7 +833,7 @@ <h2 id="root">Resource Profile: Disease - Detailed Descriptions</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-disease-examples.html b/StructureDefinition-disease-examples.html index 38f4f4fe..ed32de73 100644 --- a/StructureDefinition-disease-examples.html +++ b/StructureDefinition-disease-examples.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: Disease - Examples</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -378,7 +378,7 @@ <h2 id="root">Resource Profile: Disease - Examples</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-disease-mappings.html b/StructureDefinition-disease-mappings.html index 3f88ae89..632092be 100644 --- a/StructureDefinition-disease-mappings.html +++ b/StructureDefinition-disease-mappings.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: Disease - Mappings</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -486,7 +486,7 @@ <h2 id="root">Resource Profile: Disease - Mappings</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-disease-testing.html b/StructureDefinition-disease-testing.html index 09e98c8e..4de967ed 100644 --- a/StructureDefinition-disease-testing.html +++ b/StructureDefinition-disease-testing.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: Disease - Testing</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -362,7 +362,7 @@ <h2 id="root">Resource Profile: Disease - Testing</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-disease.html b/StructureDefinition-disease.html index 210643ca..488cf572 100644 --- a/StructureDefinition-disease.html +++ b/StructureDefinition-disease.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -321,7 +321,7 @@ <h2 id="root">Resource Profile: Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -1058,7 +1058,7 @@ <h4 id="recordeddate-vs-onset">recordedDate vs onset</h4> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-disease.json b/StructureDefinition-disease.json index 4bda33dc..bb683148 100644 --- a/StructureDefinition-disease.json +++ b/StructureDefinition-disease.json @@ -1,2006 +1,1710 @@ -{ - "resourceType": "StructureDefinition", - "id": "disease", - "text": { - "status": "extensions", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-disease-definitions.html#Condition\">Condition</a><a name=\"Condition\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/condition.html\">Condition</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Detailed information about conditions, problems or diagnoses</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-disease-definitions.html#Condition.code\">code</a><a name=\"Condition.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Identification of the condition, problem or diagnosis</span><br/><span style=\"font-weight:bold\">Binding: </span><a href=\"ValueSet-disease-codes.html\">Disease Codes</a> (<a href=\"http://hl7.org/fhir/R4/terminologies.html#extensible\" title=\"To be conformant, the concept in this element SHALL be from the specified value set if any of the codes within the value set can apply to the concept being communicated. If the value set does not cover the concept (based on human review), alternate codings (or, data type allowing, text) may be included instead.\">extensible</a>)</td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - }, - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", - "valueString": "Clinical.Summary" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", - "valueCode": "patient" - } - ], - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/disease", - "version": "0.2.0", - "name": "Disease", - "title": "NCPI Disease", - "status": "draft", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "Representation for a disease under study for a given research dataset.", - "fhirVersion": "4.0.1", - "mapping": [ - { - "identity": "workflow", - "uri": "http://hl7.org/fhir/workflow", - "name": "Workflow Pattern" - }, - { - "identity": "sct-concept", - "uri": "http://snomed.info/conceptdomain", - "name": "SNOMED CT Concept Domain Binding" - }, - { - "identity": "v2", - "uri": "http://hl7.org/v2", - "name": "HL7 v2 Mapping" - }, - { - "identity": "rim", - "uri": "http://hl7.org/v3", - "name": "RIM Mapping" - }, - { - "identity": "w5", - "uri": "http://hl7.org/fhir/fivews", - "name": "FiveWs Pattern Mapping" - }, - { - "identity": "sct-attr", - "uri": "http://snomed.org/attributebinding", - "name": "SNOMED CT Attribute Binding" - } - ], - "kind": "resource", - "abstract": false, - "type": "Condition", - "baseDefinition": "http://hl7.org/fhir/StructureDefinition/Condition", - "derivation": "constraint", - "snapshot": { - "element": [ - { - "id": "Condition", - "path": "Condition", - "short": "Detailed information about conditions, problems or diagnoses", - "definition": "A clinical condition, problem, diagnosis, or other event, situation, issue, or clinical concept that has risen to a level of concern.", - "min": 0, - "max": "*", - "base": { - "path": "Condition", - "min": 0, - "max": "*" - }, - "constraint": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", - "valueBoolean": true - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", - "valueMarkdown": "Most systems will expect a clinicalStatus to be valued for problem-list-items that are managed over time, but might not need a clinicalStatus for point in time encounter-diagnosis." - } - ], - "key": "con-3", - "severity": "warning", - "human": "Condition.clinicalStatus SHALL be present if verificationStatus is not entered-in-error and category is problem-list-item", - "expression": "clinicalStatus.exists() or verificationStatus.coding.where(system='http://terminology.hl7.org/CodeSystem/condition-ver-status' and code = 'entered-in-error').exists() or category.select($this='problem-list-item').empty()", - "xpath": "exists(f:clinicalStatus) or exists(f:verificationStatus/f:coding/f:code/@value='entered-in-error') or not(exists(category[@value='problem-list-item']))", - "source": "http://hl7.org/fhir/StructureDefinition/Condition" - }, - { - "key": "con-4", - "severity": "error", - "human": "If condition is abated, then clinicalStatus must be either inactive, resolved, or remission", - "expression": "abatement.empty() or clinicalStatus.coding.where(system='http://terminology.hl7.org/CodeSystem/condition-clinical' and (code='resolved' or code='remission' or code='inactive')).exists()", - "xpath": "not(exists(*[starts-with(local-name(.), 'abatement')])) or exists(f:clinicalStatus/f:coding[f:system/@value='http://terminology.hl7.org/CodeSystem/condition-clinical' and f:code/@value=('resolved', 'remission', 'inactive')])", - "source": "http://hl7.org/fhir/StructureDefinition/Condition" - }, - { - "key": "con-5", - "severity": "error", - "human": "Condition.clinicalStatus SHALL NOT be present if verification Status is entered-in-error", - "expression": "verificationStatus.coding.where(system='http://terminology.hl7.org/CodeSystem/condition-ver-status' and code='entered-in-error').empty() or clinicalStatus.empty()", - "xpath": "not(exists(f:verificationStatus/f:coding[f:system/@value='http://terminology.hl7.org/CodeSystem/condition-ver-status' and f:code/@value='entered-in-error'])) or not(exists(f:clinicalStatus))", - "source": "http://hl7.org/fhir/StructureDefinition/Condition" - }, - { - "key": "dom-2", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL NOT contain nested Resources", - "expression": "contained.contained.empty()", - "xpath": "not(parent::f:contained and f:contained)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-3", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", - "expression": "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", - "xpath": "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-4", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", - "expression": "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-5", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a security label", - "expression": "contained.meta.security.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:security))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", - "valueBoolean": true - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", - "valueMarkdown": "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." - } - ], - "key": "dom-6", - "severity": "warning", - "human": "A resource should have narrative for robust management", - "expression": "text.`div`.exists()", - "xpath": "exists(f:text/h:div)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Entity. Role, or Act" - }, - { - "identity": "workflow", - "map": "Event" - }, - { - "identity": "sct-concept", - "map": "< 243796009 |Situation with explicit context| : 246090004 |Associated finding| = ( ( < 404684003 |Clinical finding| MINUS ( << 420134006 |Propensity to adverse reactions| OR << 473010000 |Hypersensitivity condition| OR << 79899007 |Drug interaction| OR << 69449002 |Drug action| OR << 441742003 |Evaluation finding| OR << 307824009 |Administrative status| OR << 385356007 |Tumor stage finding|)) OR < 272379006 |Event|)" - }, - { - "identity": "v2", - "map": "PPR message" - }, - { - "identity": "rim", - "map": "Observation[classCode=OBS, moodCode=EVN, code=ASSERTION, value<Diagnosis]" - } - ] - }, - { - "id": "Condition.id", - "path": "Condition.id", - "short": "Logical id of this artifact", - "definition": "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", - "comment": "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "id" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "Condition.meta", - "path": "Condition.meta", - "short": "Metadata about the resource", - "definition": "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.meta", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Meta" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "Condition.implicitRules", - "path": "Condition.implicitRules", - "short": "A set of rules under which this content was created", - "definition": "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", - "comment": "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.implicitRules", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", - "isSummary": true - }, - { - "id": "Condition.language", - "path": "Condition.language", - "short": "Language of the resource content", - "definition": "The base language in which the resource is written.", - "comment": "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", - "min": 0, - "max": "1", - "base": { - "path": "Resource.language", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", - "valueCanonical": "http://hl7.org/fhir/ValueSet/all-languages" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "Language" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "preferred", - "description": "A human language.", - "valueSet": "http://hl7.org/fhir/ValueSet/languages" - } - }, - { - "id": "Condition.text", - "path": "Condition.text", - "short": "Text summary of the resource, for human interpretation", - "definition": "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", - "comment": "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", - "alias": [ - "narrative", - "html", - "xhtml", - "display" - ], - "min": 0, - "max": "1", - "base": { - "path": "DomainResource.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Narrative" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Act.text?" - } - ] - }, - { - "id": "Condition.contained", - "path": "Condition.contained", - "short": "Contained, inline Resources", - "definition": "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", - "comment": "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", - "alias": [ - "inline resources", - "anonymous resources", - "contained resources" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.contained", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Resource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Condition.extension", - "path": "Condition.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Condition.modifierExtension", - "path": "Condition.modifierExtension", - "short": "Extensions that cannot be ignored", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Condition.identifier", - "path": "Condition.identifier", - "short": "External Ids for this condition", - "definition": "Business identifiers assigned to this condition by the performer or other systems which remain constant as the resource is updated and propagates from server to server.", - "comment": "This is a business identifier, not a resource identifier (see [discussion](http://hl7.org/fhir/R4/resource.html#identifiers)). It is best practice for the identifier to only appear on a single resource instance, however business practices may occasionally dictate that multiple resource instances with the same identifier can exist - possibly even with different resource types. For example, multiple Patient and a Person resource instance might share the same social insurance number.", - "requirements": "Allows identification of the condition as it is known by various participating systems and in a way that remains consistent across servers.", - "min": 0, - "max": "*", - "base": { - "path": "Condition.identifier", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Identifier" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.identifier" - }, - { - "identity": "w5", - "map": "FiveWs.identifier" - }, - { - "identity": "rim", - "map": ".id" - } - ] - }, - { - "id": "Condition.clinicalStatus", - "path": "Condition.clinicalStatus", - "short": "active | recurrence | relapse | inactive | remission | resolved", - "definition": "The clinical status of the condition.", - "comment": "The data type is CodeableConcept because clinicalStatus has some clinical judgment involved, such that there might need to be more specificity than the required FHIR value set allows. For example, a SNOMED coding might allow for additional specificity.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.clinicalStatus", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "con-3", - "con-4", - "con-5" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because the status contains codes that mark the condition as no longer active.", - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ConditionClinicalStatus" - } - ], - "strength": "required", - "description": "The clinical status of the condition or diagnosis.", - "valueSet": "http://hl7.org/fhir/ValueSet/condition-clinical|4.0.1" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.status" - }, - { - "identity": "w5", - "map": "FiveWs.status" - }, - { - "identity": "sct-concept", - "map": "< 303105007 |Disease phases|" - }, - { - "identity": "v2", - "map": "PRB-14" - }, - { - "identity": "rim", - "map": "Observation ACT\n.inboundRelationship[typeCode=COMP].source[classCode=OBS, code=\"clinicalStatus\", moodCode=EVN].value" - } - ] - }, - { - "id": "Condition.verificationStatus", - "path": "Condition.verificationStatus", - "short": "unconfirmed | provisional | differential | confirmed | refuted | entered-in-error", - "definition": "The verification status to support the clinical status of the condition.", - "comment": "verificationStatus is not required. For example, when a patient has abdominal pain in the ED, there is not likely going to be a verification status.\nThe data type is CodeableConcept because verificationStatus has some clinical judgment involved, such that there might need to be more specificity than the required FHIR value set allows. For example, a SNOMED coding might allow for additional specificity.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.verificationStatus", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "con-3", - "con-5" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because the status contains the code refuted and entered-in-error that mark the Condition as not currently valid.", - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ConditionVerificationStatus" - } - ], - "strength": "required", - "description": "The verification status to support or decline the clinical status of the condition or diagnosis.", - "valueSet": "http://hl7.org/fhir/ValueSet/condition-ver-status|4.0.1" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.status" - }, - { - "identity": "w5", - "map": "FiveWs.status" - }, - { - "identity": "sct-concept", - "map": "< 410514004 |Finding context value|" - }, - { - "identity": "v2", - "map": "PRB-13" - }, - { - "identity": "rim", - "map": "Observation ACT\n.inboundRelationship[typeCode=COMP].source[classCode=OBS, code=\"verificationStatus\", moodCode=EVN].value" - }, - { - "identity": "sct-attr", - "map": "408729009" - } - ] - }, - { - "id": "Condition.category", - "path": "Condition.category", - "short": "problem-list-item | encounter-diagnosis", - "definition": "A category assigned to the condition.", - "comment": "The categorization is often highly contextual and may appear poorly differentiated or not very useful in other contexts.", - "min": 0, - "max": "*", - "base": { - "path": "Condition.category", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ConditionCategory" - } - ], - "strength": "extensible", - "description": "A category assigned to the condition.", - "valueSet": "http://hl7.org/fhir/ValueSet/condition-category" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.class" - }, - { - "identity": "sct-concept", - "map": "< 404684003 |Clinical finding|" - }, - { - "identity": "v2", - "map": "'problem' if from PRB-3. 'diagnosis' if from DG1 segment in PV1 message" - }, - { - "identity": "rim", - "map": ".code" - } - ] - }, - { - "id": "Condition.severity", - "path": "Condition.severity", - "short": "Subjective severity of condition", - "definition": "A subjective assessment of the severity of the condition as evaluated by the clinician.", - "comment": "Coding of the severity with a terminology is preferred, where possible.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.severity", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ConditionSeverity" - } - ], - "strength": "preferred", - "description": "A subjective assessment of the severity of the condition as evaluated by the clinician.", - "valueSet": "http://hl7.org/fhir/ValueSet/condition-severity" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.grade" - }, - { - "identity": "sct-concept", - "map": "< 272141005 |Severities|" - }, - { - "identity": "v2", - "map": "PRB-26 / ABS-3" - }, - { - "identity": "rim", - "map": "Can be pre/post-coordinated into value. Or ./inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"severity\"].value" - }, - { - "identity": "sct-attr", - "map": "246112005" - } - ] - }, - { - "id": "Condition.code", - "path": "Condition.code", - "short": "Identification of the condition, problem or diagnosis", - "definition": "Identification of the condition, problem or diagnosis.", - "requirements": "0..1 to account for primarily narrative only resources.", - "alias": [ - "type" - ], - "min": 0, - "max": "1", - "base": { - "path": "Condition.code", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "strength": "extensible", - "valueSet": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/disease-codes" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.code" - }, - { - "identity": "w5", - "map": "FiveWs.what[x]" - }, - { - "identity": "sct-concept", - "map": "code 246090004 |Associated finding| (< 404684003 |Clinical finding| MINUS\n<< 420134006 |Propensity to adverse reactions| MINUS \n<< 473010000 |Hypersensitivity condition| MINUS \n<< 79899007 |Drug interaction| MINUS\n<< 69449002 |Drug action| MINUS \n<< 441742003 |Evaluation finding| MINUS \n<< 307824009 |Administrative status| MINUS \n<< 385356007 |Tumor stage finding|) \nOR < 413350009 |Finding with explicit context|\nOR < 272379006 |Event|" - }, - { - "identity": "v2", - "map": "PRB-3" - }, - { - "identity": "rim", - "map": ".value" - }, - { - "identity": "sct-attr", - "map": "246090004" - } - ] - }, - { - "id": "Condition.bodySite", - "path": "Condition.bodySite", - "short": "Anatomical location, if relevant", - "definition": "The anatomical location where this condition manifests itself.", - "comment": "Only used if not implicit in code found in Condition.code. If the use case requires attributes from the BodySite resource (e.g. to identify and track separately) then use the standard extension [bodySite](http://hl7.org/fhir/R4/extension-bodysite.html). May be a summary code, or a reference to a very precise definition of the location, or both.", - "min": 0, - "max": "*", - "base": { - "path": "Condition.bodySite", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "BodySite" - } - ], - "strength": "example", - "description": "Codes describing anatomical locations. May include laterality.", - "valueSet": "http://hl7.org/fhir/ValueSet/body-site" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 442083009 |Anatomical or acquired body structure|" - }, - { - "identity": "rim", - "map": ".targetBodySiteCode" - }, - { - "identity": "sct-attr", - "map": "363698007" - } - ] - }, - { - "id": "Condition.subject", - "path": "Condition.subject", - "short": "Who has the condition?", - "definition": "Indicates the patient or group who the condition record is associated with.", - "requirements": "Group is typically used for veterinary or public health use cases.", - "alias": [ - "patient" - ], - "min": 1, - "max": "1", - "base": { - "path": "Condition.subject", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Patient", - "http://hl7.org/fhir/StructureDefinition/Group" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.subject" - }, - { - "identity": "w5", - "map": "FiveWs.subject[x]" - }, - { - "identity": "v2", - "map": "PID-3" - }, - { - "identity": "rim", - "map": ".participation[typeCode=SBJ].role[classCode=PAT]" - }, - { - "identity": "w5", - "map": "FiveWs.subject" - } - ] - }, - { - "id": "Condition.encounter", - "path": "Condition.encounter", - "short": "Encounter created as part of", - "definition": "The Encounter during which this Condition was created or to which the creation of this record is tightly associated.", - "comment": "This will typically be the encounter the event occurred within, but some activities may be initiated prior to or after the official completion of an encounter but still be tied to the context of the encounter. This record indicates the encounter this particular record is associated with. In the case of a \"new\" diagnosis reflecting ongoing/revised information about the condition, this might be distinct from the first encounter in which the underlying condition was first \"known\".", - "min": 0, - "max": "1", - "base": { - "path": "Condition.encounter", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Encounter" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.context" - }, - { - "identity": "w5", - "map": "FiveWs.context" - }, - { - "identity": "v2", - "map": "PV1-19 (+PV1-54)" - }, - { - "identity": "rim", - "map": ".inboundRelationship[typeCode=COMP].source[classCode=ENC, moodCode=EVN]" - } - ] - }, - { - "id": "Condition.onset[x]", - "path": "Condition.onset[x]", - "short": "Estimated or actual date, date-time, or age", - "definition": "Estimated or actual date or date-time the condition began, in the opinion of the clinician.", - "comment": "Age is generally used when the patient reports an age at which the Condition began to occur.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.onset[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "dateTime" - }, - { - "code": "Age" - }, - { - "code": "Period" - }, - { - "code": "Range" - }, - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.occurrence[x]" - }, - { - "identity": "w5", - "map": "FiveWs.init" - }, - { - "identity": "v2", - "map": "PRB-16" - }, - { - "identity": "rim", - "map": ".effectiveTime.low or .inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"age at onset\"].value" - } - ] - }, - { - "id": "Condition.abatement[x]", - "path": "Condition.abatement[x]", - "short": "When in resolution/remission", - "definition": "The date or estimated date that the condition resolved or went into remission. This is called \"abatement\" because of the many overloaded connotations associated with \"remission\" or \"resolution\" - Conditions are never really resolved, but they can abate.", - "comment": "There is no explicit distinction between resolution and remission because in many cases the distinction is not clear. Age is generally used when the patient reports an age at which the Condition abated. If there is no abatement element, it is unknown whether the condition has resolved or entered remission; applications and users should generally assume that the condition is still valid. When abatementString exists, it implies the condition is abated.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.abatement[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "dateTime" - }, - { - "code": "Age" - }, - { - "code": "Period" - }, - { - "code": "Range" - }, - { - "code": "string" - } - ], - "condition": [ - "con-4" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.done[x]" - }, - { - "identity": "rim", - "map": ".effectiveTime.high or .inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"age at remission\"].value or .inboundRelationship[typeCode=SUBJ]source[classCode=CONC, moodCode=EVN].status=completed" - } - ] - }, - { - "id": "Condition.recordedDate", - "path": "Condition.recordedDate", - "short": "Date record was first recorded", - "definition": "The recordedDate represents when this particular Condition record was created in the system, which is often a system-generated date.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.recordedDate", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "dateTime" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.recorded" - }, - { - "identity": "v2", - "map": "REL-11" - }, - { - "identity": "rim", - "map": ".participation[typeCode=AUT].time" - } - ] - }, - { - "id": "Condition.recorder", - "path": "Condition.recorder", - "short": "Who recorded the condition", - "definition": "Individual who recorded the record and takes responsibility for its content.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.recorder", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Practitioner", - "http://hl7.org/fhir/StructureDefinition/PractitionerRole", - "http://hl7.org/fhir/StructureDefinition/Patient", - "http://hl7.org/fhir/StructureDefinition/RelatedPerson" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.author" - }, - { - "identity": "rim", - "map": ".participation[typeCode=AUT].role" - } - ] - }, - { - "id": "Condition.asserter", - "path": "Condition.asserter", - "short": "Person who asserts this condition", - "definition": "Individual who is making the condition statement.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.asserter", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Practitioner", - "http://hl7.org/fhir/StructureDefinition/PractitionerRole", - "http://hl7.org/fhir/StructureDefinition/Patient", - "http://hl7.org/fhir/StructureDefinition/RelatedPerson" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.source" - }, - { - "identity": "v2", - "map": "REL-7.1 identifier + REL-7.12 type code" - }, - { - "identity": "rim", - "map": ".participation[typeCode=INF].role" - } - ] - }, - { - "id": "Condition.stage", - "path": "Condition.stage", - "short": "Stage/grade, usually assessed formally", - "definition": "Clinical stage or grade of a condition. May include formal severity assessments.", - "min": 0, - "max": "*", - "base": { - "path": "Condition.stage", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "con-1", - "severity": "error", - "human": "Stage SHALL have summary or assessment", - "expression": "summary.exists() or assessment.exists()", - "xpath": "exists(f:summary) or exists(f:assessment)", - "source": "http://hl7.org/fhir/StructureDefinition/Condition" - }, - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "./inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"stage/grade\"]" - } - ] - }, - { - "id": "Condition.stage.id", - "path": "Condition.stage.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Condition.stage.extension", - "path": "Condition.stage.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Condition.stage.modifierExtension", - "path": "Condition.stage.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Condition.stage.summary", - "path": "Condition.stage.summary", - "short": "Simple summary (disease specific)", - "definition": "A simple summary of the stage such as \"Stage 3\". The determination of the stage is disease-specific.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.stage.summary", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "con-1" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ConditionStage" - } - ], - "strength": "example", - "description": "Codes describing condition stages (e.g. Cancer stages).", - "valueSet": "http://hl7.org/fhir/ValueSet/condition-stage" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 254291000 |Staging and scales|" - }, - { - "identity": "v2", - "map": "PRB-14" - }, - { - "identity": "rim", - "map": ".value" - } - ] - }, - { - "id": "Condition.stage.assessment", - "path": "Condition.stage.assessment", - "short": "Formal record of assessment", - "definition": "Reference to a formal record of the evidence on which the staging assessment is based.", - "min": 0, - "max": "*", - "base": { - "path": "Condition.stage.assessment", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/ClinicalImpression", - "http://hl7.org/fhir/StructureDefinition/DiagnosticReport", - "http://hl7.org/fhir/StructureDefinition/Observation" - ] - } - ], - "condition": [ - "con-1" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": ".self" - } - ] - }, - { - "id": "Condition.stage.type", - "path": "Condition.stage.type", - "short": "Kind of staging", - "definition": "The kind of staging, such as pathological or clinical staging.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.stage.type", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ConditionStageType" - } - ], - "strength": "example", - "description": "Codes describing the kind of condition staging (e.g. clinical or pathological).", - "valueSet": "http://hl7.org/fhir/ValueSet/condition-stage-type" - }, - "mapping": [ - { - "identity": "rim", - "map": "./inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"stage type\"]" - } - ] - }, - { - "id": "Condition.evidence", - "path": "Condition.evidence", - "short": "Supporting evidence", - "definition": "Supporting evidence / manifestations that are the basis of the Condition's verification status, such as evidence that confirmed or refuted the condition.", - "comment": "The evidence may be a simple list of coded symptoms/manifestations, or references to observations or formal assessments, or both.", - "min": 0, - "max": "*", - "base": { - "path": "Condition.evidence", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "con-2", - "severity": "error", - "human": "evidence SHALL have code or details", - "expression": "code.exists() or detail.exists()", - "xpath": "exists(f:code) or exists(f:detail)", - "source": "http://hl7.org/fhir/StructureDefinition/Condition" - }, - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=SPRT].target[classCode=OBS, moodCode=EVN]" - } - ] - }, - { - "id": "Condition.evidence.id", - "path": "Condition.evidence.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Condition.evidence.extension", - "path": "Condition.evidence.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Condition.evidence.modifierExtension", - "path": "Condition.evidence.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Condition.evidence.code", - "path": "Condition.evidence.code", - "short": "Manifestation/symptom", - "definition": "A manifestation or symptom that led to the recording of this condition.", - "min": 0, - "max": "*", - "base": { - "path": "Condition.evidence.code", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "con-2" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ManifestationOrSymptom" - } - ], - "strength": "example", - "description": "Codes that describe the manifestation or symptoms of a condition.", - "valueSet": "http://hl7.org/fhir/ValueSet/manifestation-or-symptom" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.reasonCode" - }, - { - "identity": "w5", - "map": "FiveWs.why[x]" - }, - { - "identity": "sct-concept", - "map": "< 404684003 |Clinical finding|" - }, - { - "identity": "rim", - "map": "[code=\"diagnosis\"].value" - } - ] - }, - { - "id": "Condition.evidence.detail", - "path": "Condition.evidence.detail", - "short": "Supporting information found elsewhere", - "definition": "Links to other relevant information, including pathology reports.", - "min": 0, - "max": "*", - "base": { - "path": "Condition.evidence.detail", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Resource" - ] - } - ], - "condition": [ - "con-2" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.why[x]" - }, - { - "identity": "rim", - "map": ".self" - } - ] - }, - { - "id": "Condition.note", - "path": "Condition.note", - "short": "Additional information about the Condition", - "definition": "Additional information about the Condition. This is a general notes/comments entry for description of the Condition, its diagnosis and prognosis.", - "min": 0, - "max": "*", - "base": { - "path": "Condition.note", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Annotation" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Event.note" - }, - { - "identity": "v2", - "map": "NTE child of PRB" - }, - { - "identity": "rim", - "map": ".inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"annotation\"].value" - } - ] - } - ] - }, - "differential": { - "element": [ - { - "id": "Condition", - "path": "Condition" - }, - { - "id": "Condition.code", - "path": "Condition.code", - "binding": { - "strength": "extensible", - "valueSet": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/disease-codes" - } - } - ] - } +{ + "resourceType" : "StructureDefinition", + "id" : "disease", + "text" : { + "status" : "extensions", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-disease-definitions.html#Condition\">Condition</a><a name=\"Condition\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/condition.html\">Condition</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Detailed information about conditions, problems or diagnoses</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-disease-definitions.html#Condition.code\">code</a><a name=\"Condition.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Identification of the condition, problem or diagnosis</span><br/><span style=\"font-weight:bold\">Binding: </span><a href=\"ValueSet-disease-codes.html\">Disease Codes</a> (<a href=\"http://hl7.org/fhir/R4/terminologies.html#extensible\" title=\"To be conformant, the concept in this element SHALL be from the specified value set if any of the codes within the value set can apply to the concept being communicated. If the value set does not cover the concept (based on human review), alternate codings (or, data type allowing, text) may be included instead.\">extensible</a>)</td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" + }, + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", + "valueString" : "Clinical.Summary" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", + "valueCode" : "patient" + }], + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/disease", + "version" : "0.2.0", + "name" : "Disease", + "title" : "NCPI Disease", + "status" : "draft", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "Representation for a disease under study for a given research dataset.", + "fhirVersion" : "4.0.1", + "mapping" : [{ + "identity" : "workflow", + "uri" : "http://hl7.org/fhir/workflow", + "name" : "Workflow Pattern" + }, + { + "identity" : "sct-concept", + "uri" : "http://snomed.info/conceptdomain", + "name" : "SNOMED CT Concept Domain Binding" + }, + { + "identity" : "v2", + "uri" : "http://hl7.org/v2", + "name" : "HL7 v2 Mapping" + }, + { + "identity" : "rim", + "uri" : "http://hl7.org/v3", + "name" : "RIM Mapping" + }, + { + "identity" : "w5", + "uri" : "http://hl7.org/fhir/fivews", + "name" : "FiveWs Pattern Mapping" + }, + { + "identity" : "sct-attr", + "uri" : "http://snomed.org/attributebinding", + "name" : "SNOMED CT Attribute Binding" + }], + "kind" : "resource", + "abstract" : false, + "type" : "Condition", + "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/Condition", + "derivation" : "constraint", + "snapshot" : { + "element" : [{ + "id" : "Condition", + "path" : "Condition", + "short" : "Detailed information about conditions, problems or diagnoses", + "definition" : "A clinical condition, problem, diagnosis, or other event, situation, issue, or clinical concept that has risen to a level of concern.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition", + "min" : 0, + "max" : "*" + }, + "constraint" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", + "valueBoolean" : true + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", + "valueMarkdown" : "Most systems will expect a clinicalStatus to be valued for problem-list-items that are managed over time, but might not need a clinicalStatus for point in time encounter-diagnosis." + }], + "key" : "con-3", + "severity" : "warning", + "human" : "Condition.clinicalStatus SHALL be present if verificationStatus is not entered-in-error and category is problem-list-item", + "expression" : "clinicalStatus.exists() or verificationStatus.coding.where(system='http://terminology.hl7.org/CodeSystem/condition-ver-status' and code = 'entered-in-error').exists() or category.select($this='problem-list-item').empty()", + "xpath" : "exists(f:clinicalStatus) or exists(f:verificationStatus/f:coding/f:code/@value='entered-in-error') or not(exists(category[@value='problem-list-item']))", + "source" : "http://hl7.org/fhir/StructureDefinition/Condition" + }, + { + "key" : "con-4", + "severity" : "error", + "human" : "If condition is abated, then clinicalStatus must be either inactive, resolved, or remission", + "expression" : "abatement.empty() or clinicalStatus.coding.where(system='http://terminology.hl7.org/CodeSystem/condition-clinical' and (code='resolved' or code='remission' or code='inactive')).exists()", + "xpath" : "not(exists(*[starts-with(local-name(.), 'abatement')])) or exists(f:clinicalStatus/f:coding[f:system/@value='http://terminology.hl7.org/CodeSystem/condition-clinical' and f:code/@value=('resolved', 'remission', 'inactive')])", + "source" : "http://hl7.org/fhir/StructureDefinition/Condition" + }, + { + "key" : "con-5", + "severity" : "error", + "human" : "Condition.clinicalStatus SHALL NOT be present if verification Status is entered-in-error", + "expression" : "verificationStatus.coding.where(system='http://terminology.hl7.org/CodeSystem/condition-ver-status' and code='entered-in-error').empty() or clinicalStatus.empty()", + "xpath" : "not(exists(f:verificationStatus/f:coding[f:system/@value='http://terminology.hl7.org/CodeSystem/condition-ver-status' and f:code/@value='entered-in-error'])) or not(exists(f:clinicalStatus))", + "source" : "http://hl7.org/fhir/StructureDefinition/Condition" + }, + { + "key" : "dom-2", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL NOT contain nested Resources", + "expression" : "contained.contained.empty()", + "xpath" : "not(parent::f:contained and f:contained)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-3", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", + "expression" : "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", + "xpath" : "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-4", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", + "expression" : "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-5", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a security label", + "expression" : "contained.meta.security.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:security))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", + "valueBoolean" : true + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", + "valueMarkdown" : "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." + }], + "key" : "dom-6", + "severity" : "warning", + "human" : "A resource should have narrative for robust management", + "expression" : "text.`div`.exists()", + "xpath" : "exists(f:text/h:div)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Entity. Role, or Act" + }, + { + "identity" : "workflow", + "map" : "Event" + }, + { + "identity" : "sct-concept", + "map" : "< 243796009 |Situation with explicit context| : 246090004 |Associated finding| = ( ( < 404684003 |Clinical finding| MINUS ( << 420134006 |Propensity to adverse reactions| OR << 473010000 |Hypersensitivity condition| OR << 79899007 |Drug interaction| OR << 69449002 |Drug action| OR << 441742003 |Evaluation finding| OR << 307824009 |Administrative status| OR << 385356007 |Tumor stage finding|)) OR < 272379006 |Event|)" + }, + { + "identity" : "v2", + "map" : "PPR message" + }, + { + "identity" : "rim", + "map" : "Observation[classCode=OBS, moodCode=EVN, code=ASSERTION, value<Diagnosis]" + }] + }, + { + "id" : "Condition.id", + "path" : "Condition.id", + "short" : "Logical id of this artifact", + "definition" : "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", + "comment" : "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "id" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "Condition.meta", + "path" : "Condition.meta", + "short" : "Metadata about the resource", + "definition" : "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.meta", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Meta" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "Condition.implicitRules", + "path" : "Condition.implicitRules", + "short" : "A set of rules under which this content was created", + "definition" : "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", + "comment" : "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.implicitRules", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", + "isSummary" : true + }, + { + "id" : "Condition.language", + "path" : "Condition.language", + "short" : "Language of the resource content", + "definition" : "The base language in which the resource is written.", + "comment" : "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.language", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", + "valueCanonical" : "http://hl7.org/fhir/ValueSet/all-languages" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "Language" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "preferred", + "description" : "A human language.", + "valueSet" : "http://hl7.org/fhir/ValueSet/languages" + } + }, + { + "id" : "Condition.text", + "path" : "Condition.text", + "short" : "Text summary of the resource, for human interpretation", + "definition" : "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", + "comment" : "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", + "alias" : ["narrative", + "html", + "xhtml", + "display"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "DomainResource.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Narrative" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Act.text?" + }] + }, + { + "id" : "Condition.contained", + "path" : "Condition.contained", + "short" : "Contained, inline Resources", + "definition" : "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", + "comment" : "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", + "alias" : ["inline resources", + "anonymous resources", + "contained resources"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.contained", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Resource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Condition.extension", + "path" : "Condition.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Condition.modifierExtension", + "path" : "Condition.modifierExtension", + "short" : "Extensions that cannot be ignored", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Condition.identifier", + "path" : "Condition.identifier", + "short" : "External Ids for this condition", + "definition" : "Business identifiers assigned to this condition by the performer or other systems which remain constant as the resource is updated and propagates from server to server.", + "comment" : "This is a business identifier, not a resource identifier (see [discussion](http://hl7.org/fhir/R4/resource.html#identifiers)). It is best practice for the identifier to only appear on a single resource instance, however business practices may occasionally dictate that multiple resource instances with the same identifier can exist - possibly even with different resource types. For example, multiple Patient and a Person resource instance might share the same social insurance number.", + "requirements" : "Allows identification of the condition as it is known by various participating systems and in a way that remains consistent across servers.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition.identifier", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Identifier" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.identifier" + }, + { + "identity" : "w5", + "map" : "FiveWs.identifier" + }, + { + "identity" : "rim", + "map" : ".id" + }] + }, + { + "id" : "Condition.clinicalStatus", + "path" : "Condition.clinicalStatus", + "short" : "active | recurrence | relapse | inactive | remission | resolved", + "definition" : "The clinical status of the condition.", + "comment" : "The data type is CodeableConcept because clinicalStatus has some clinical judgment involved, such that there might need to be more specificity than the required FHIR value set allows. For example, a SNOMED coding might allow for additional specificity.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.clinicalStatus", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["con-3", + "con-4", + "con-5"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because the status contains codes that mark the condition as no longer active.", + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ConditionClinicalStatus" + }], + "strength" : "required", + "description" : "The clinical status of the condition or diagnosis.", + "valueSet" : "http://hl7.org/fhir/ValueSet/condition-clinical|4.0.1" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.status" + }, + { + "identity" : "w5", + "map" : "FiveWs.status" + }, + { + "identity" : "sct-concept", + "map" : "< 303105007 |Disease phases|" + }, + { + "identity" : "v2", + "map" : "PRB-14" + }, + { + "identity" : "rim", + "map" : "Observation ACT\n.inboundRelationship[typeCode=COMP].source[classCode=OBS, code=\"clinicalStatus\", moodCode=EVN].value" + }] + }, + { + "id" : "Condition.verificationStatus", + "path" : "Condition.verificationStatus", + "short" : "unconfirmed | provisional | differential | confirmed | refuted | entered-in-error", + "definition" : "The verification status to support the clinical status of the condition.", + "comment" : "verificationStatus is not required. For example, when a patient has abdominal pain in the ED, there is not likely going to be a verification status.\nThe data type is CodeableConcept because verificationStatus has some clinical judgment involved, such that there might need to be more specificity than the required FHIR value set allows. For example, a SNOMED coding might allow for additional specificity.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.verificationStatus", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["con-3", + "con-5"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because the status contains the code refuted and entered-in-error that mark the Condition as not currently valid.", + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ConditionVerificationStatus" + }], + "strength" : "required", + "description" : "The verification status to support or decline the clinical status of the condition or diagnosis.", + "valueSet" : "http://hl7.org/fhir/ValueSet/condition-ver-status|4.0.1" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.status" + }, + { + "identity" : "w5", + "map" : "FiveWs.status" + }, + { + "identity" : "sct-concept", + "map" : "< 410514004 |Finding context value|" + }, + { + "identity" : "v2", + "map" : "PRB-13" + }, + { + "identity" : "rim", + "map" : "Observation ACT\n.inboundRelationship[typeCode=COMP].source[classCode=OBS, code=\"verificationStatus\", moodCode=EVN].value" + }, + { + "identity" : "sct-attr", + "map" : "408729009" + }] + }, + { + "id" : "Condition.category", + "path" : "Condition.category", + "short" : "problem-list-item | encounter-diagnosis", + "definition" : "A category assigned to the condition.", + "comment" : "The categorization is often highly contextual and may appear poorly differentiated or not very useful in other contexts.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition.category", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ConditionCategory" + }], + "strength" : "extensible", + "description" : "A category assigned to the condition.", + "valueSet" : "http://hl7.org/fhir/ValueSet/condition-category" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.class" + }, + { + "identity" : "sct-concept", + "map" : "< 404684003 |Clinical finding|" + }, + { + "identity" : "v2", + "map" : "'problem' if from PRB-3. 'diagnosis' if from DG1 segment in PV1 message" + }, + { + "identity" : "rim", + "map" : ".code" + }] + }, + { + "id" : "Condition.severity", + "path" : "Condition.severity", + "short" : "Subjective severity of condition", + "definition" : "A subjective assessment of the severity of the condition as evaluated by the clinician.", + "comment" : "Coding of the severity with a terminology is preferred, where possible.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.severity", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ConditionSeverity" + }], + "strength" : "preferred", + "description" : "A subjective assessment of the severity of the condition as evaluated by the clinician.", + "valueSet" : "http://hl7.org/fhir/ValueSet/condition-severity" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.grade" + }, + { + "identity" : "sct-concept", + "map" : "< 272141005 |Severities|" + }, + { + "identity" : "v2", + "map" : "PRB-26 / ABS-3" + }, + { + "identity" : "rim", + "map" : "Can be pre/post-coordinated into value. Or ./inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"severity\"].value" + }, + { + "identity" : "sct-attr", + "map" : "246112005" + }] + }, + { + "id" : "Condition.code", + "path" : "Condition.code", + "short" : "Identification of the condition, problem or diagnosis", + "definition" : "Identification of the condition, problem or diagnosis.", + "requirements" : "0..1 to account for primarily narrative only resources.", + "alias" : ["type"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.code", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "strength" : "extensible", + "valueSet" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/disease-codes" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.code" + }, + { + "identity" : "w5", + "map" : "FiveWs.what[x]" + }, + { + "identity" : "sct-concept", + "map" : "code 246090004 |Associated finding| (< 404684003 |Clinical finding| MINUS\n<< 420134006 |Propensity to adverse reactions| MINUS \n<< 473010000 |Hypersensitivity condition| MINUS \n<< 79899007 |Drug interaction| MINUS\n<< 69449002 |Drug action| MINUS \n<< 441742003 |Evaluation finding| MINUS \n<< 307824009 |Administrative status| MINUS \n<< 385356007 |Tumor stage finding|) \nOR < 413350009 |Finding with explicit context|\nOR < 272379006 |Event|" + }, + { + "identity" : "v2", + "map" : "PRB-3" + }, + { + "identity" : "rim", + "map" : ".value" + }, + { + "identity" : "sct-attr", + "map" : "246090004" + }] + }, + { + "id" : "Condition.bodySite", + "path" : "Condition.bodySite", + "short" : "Anatomical location, if relevant", + "definition" : "The anatomical location where this condition manifests itself.", + "comment" : "Only used if not implicit in code found in Condition.code. If the use case requires attributes from the BodySite resource (e.g. to identify and track separately) then use the standard extension [bodySite](http://hl7.org/fhir/R4/extension-bodysite.html). May be a summary code, or a reference to a very precise definition of the location, or both.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition.bodySite", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "BodySite" + }], + "strength" : "example", + "description" : "Codes describing anatomical locations. May include laterality.", + "valueSet" : "http://hl7.org/fhir/ValueSet/body-site" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 442083009 |Anatomical or acquired body structure|" + }, + { + "identity" : "rim", + "map" : ".targetBodySiteCode" + }, + { + "identity" : "sct-attr", + "map" : "363698007" + }] + }, + { + "id" : "Condition.subject", + "path" : "Condition.subject", + "short" : "Who has the condition?", + "definition" : "Indicates the patient or group who the condition record is associated with.", + "requirements" : "Group is typically used for veterinary or public health use cases.", + "alias" : ["patient"], + "min" : 1, + "max" : "1", + "base" : { + "path" : "Condition.subject", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Patient", + "http://hl7.org/fhir/StructureDefinition/Group"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.subject" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject[x]" + }, + { + "identity" : "v2", + "map" : "PID-3" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=SBJ].role[classCode=PAT]" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject" + }] + }, + { + "id" : "Condition.encounter", + "path" : "Condition.encounter", + "short" : "Encounter created as part of", + "definition" : "The Encounter during which this Condition was created or to which the creation of this record is tightly associated.", + "comment" : "This will typically be the encounter the event occurred within, but some activities may be initiated prior to or after the official completion of an encounter but still be tied to the context of the encounter. This record indicates the encounter this particular record is associated with. In the case of a \"new\" diagnosis reflecting ongoing/revised information about the condition, this might be distinct from the first encounter in which the underlying condition was first \"known\".", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.encounter", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Encounter"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.context" + }, + { + "identity" : "w5", + "map" : "FiveWs.context" + }, + { + "identity" : "v2", + "map" : "PV1-19 (+PV1-54)" + }, + { + "identity" : "rim", + "map" : ".inboundRelationship[typeCode=COMP].source[classCode=ENC, moodCode=EVN]" + }] + }, + { + "id" : "Condition.onset[x]", + "path" : "Condition.onset[x]", + "short" : "Estimated or actual date, date-time, or age", + "definition" : "Estimated or actual date or date-time the condition began, in the opinion of the clinician.", + "comment" : "Age is generally used when the patient reports an age at which the Condition began to occur.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.onset[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "dateTime" + }, + { + "code" : "Age" + }, + { + "code" : "Period" + }, + { + "code" : "Range" + }, + { + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.occurrence[x]" + }, + { + "identity" : "w5", + "map" : "FiveWs.init" + }, + { + "identity" : "v2", + "map" : "PRB-16" + }, + { + "identity" : "rim", + "map" : ".effectiveTime.low or .inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"age at onset\"].value" + }] + }, + { + "id" : "Condition.abatement[x]", + "path" : "Condition.abatement[x]", + "short" : "When in resolution/remission", + "definition" : "The date or estimated date that the condition resolved or went into remission. This is called \"abatement\" because of the many overloaded connotations associated with \"remission\" or \"resolution\" - Conditions are never really resolved, but they can abate.", + "comment" : "There is no explicit distinction between resolution and remission because in many cases the distinction is not clear. Age is generally used when the patient reports an age at which the Condition abated. If there is no abatement element, it is unknown whether the condition has resolved or entered remission; applications and users should generally assume that the condition is still valid. When abatementString exists, it implies the condition is abated.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.abatement[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "dateTime" + }, + { + "code" : "Age" + }, + { + "code" : "Period" + }, + { + "code" : "Range" + }, + { + "code" : "string" + }], + "condition" : ["con-4"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.done[x]" + }, + { + "identity" : "rim", + "map" : ".effectiveTime.high or .inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"age at remission\"].value or .inboundRelationship[typeCode=SUBJ]source[classCode=CONC, moodCode=EVN].status=completed" + }] + }, + { + "id" : "Condition.recordedDate", + "path" : "Condition.recordedDate", + "short" : "Date record was first recorded", + "definition" : "The recordedDate represents when this particular Condition record was created in the system, which is often a system-generated date.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.recordedDate", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "dateTime" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.recorded" + }, + { + "identity" : "v2", + "map" : "REL-11" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=AUT].time" + }] + }, + { + "id" : "Condition.recorder", + "path" : "Condition.recorder", + "short" : "Who recorded the condition", + "definition" : "Individual who recorded the record and takes responsibility for its content.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.recorder", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Practitioner", + "http://hl7.org/fhir/StructureDefinition/PractitionerRole", + "http://hl7.org/fhir/StructureDefinition/Patient", + "http://hl7.org/fhir/StructureDefinition/RelatedPerson"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.author" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=AUT].role" + }] + }, + { + "id" : "Condition.asserter", + "path" : "Condition.asserter", + "short" : "Person who asserts this condition", + "definition" : "Individual who is making the condition statement.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.asserter", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Practitioner", + "http://hl7.org/fhir/StructureDefinition/PractitionerRole", + "http://hl7.org/fhir/StructureDefinition/Patient", + "http://hl7.org/fhir/StructureDefinition/RelatedPerson"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.source" + }, + { + "identity" : "v2", + "map" : "REL-7.1 identifier + REL-7.12 type code" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=INF].role" + }] + }, + { + "id" : "Condition.stage", + "path" : "Condition.stage", + "short" : "Stage/grade, usually assessed formally", + "definition" : "Clinical stage or grade of a condition. May include formal severity assessments.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition.stage", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "con-1", + "severity" : "error", + "human" : "Stage SHALL have summary or assessment", + "expression" : "summary.exists() or assessment.exists()", + "xpath" : "exists(f:summary) or exists(f:assessment)", + "source" : "http://hl7.org/fhir/StructureDefinition/Condition" + }, + { + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "./inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"stage/grade\"]" + }] + }, + { + "id" : "Condition.stage.id", + "path" : "Condition.stage.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Condition.stage.extension", + "path" : "Condition.stage.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Condition.stage.modifierExtension", + "path" : "Condition.stage.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Condition.stage.summary", + "path" : "Condition.stage.summary", + "short" : "Simple summary (disease specific)", + "definition" : "A simple summary of the stage such as \"Stage 3\". The determination of the stage is disease-specific.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.stage.summary", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["con-1"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ConditionStage" + }], + "strength" : "example", + "description" : "Codes describing condition stages (e.g. Cancer stages).", + "valueSet" : "http://hl7.org/fhir/ValueSet/condition-stage" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 254291000 |Staging and scales|" + }, + { + "identity" : "v2", + "map" : "PRB-14" + }, + { + "identity" : "rim", + "map" : ".value" + }] + }, + { + "id" : "Condition.stage.assessment", + "path" : "Condition.stage.assessment", + "short" : "Formal record of assessment", + "definition" : "Reference to a formal record of the evidence on which the staging assessment is based.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition.stage.assessment", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/ClinicalImpression", + "http://hl7.org/fhir/StructureDefinition/DiagnosticReport", + "http://hl7.org/fhir/StructureDefinition/Observation"] + }], + "condition" : ["con-1"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : ".self" + }] + }, + { + "id" : "Condition.stage.type", + "path" : "Condition.stage.type", + "short" : "Kind of staging", + "definition" : "The kind of staging, such as pathological or clinical staging.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.stage.type", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ConditionStageType" + }], + "strength" : "example", + "description" : "Codes describing the kind of condition staging (e.g. clinical or pathological).", + "valueSet" : "http://hl7.org/fhir/ValueSet/condition-stage-type" + }, + "mapping" : [{ + "identity" : "rim", + "map" : "./inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"stage type\"]" + }] + }, + { + "id" : "Condition.evidence", + "path" : "Condition.evidence", + "short" : "Supporting evidence", + "definition" : "Supporting evidence / manifestations that are the basis of the Condition's verification status, such as evidence that confirmed or refuted the condition.", + "comment" : "The evidence may be a simple list of coded symptoms/manifestations, or references to observations or formal assessments, or both.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition.evidence", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "con-2", + "severity" : "error", + "human" : "evidence SHALL have code or details", + "expression" : "code.exists() or detail.exists()", + "xpath" : "exists(f:code) or exists(f:detail)", + "source" : "http://hl7.org/fhir/StructureDefinition/Condition" + }, + { + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=SPRT].target[classCode=OBS, moodCode=EVN]" + }] + }, + { + "id" : "Condition.evidence.id", + "path" : "Condition.evidence.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Condition.evidence.extension", + "path" : "Condition.evidence.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Condition.evidence.modifierExtension", + "path" : "Condition.evidence.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Condition.evidence.code", + "path" : "Condition.evidence.code", + "short" : "Manifestation/symptom", + "definition" : "A manifestation or symptom that led to the recording of this condition.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition.evidence.code", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["con-2"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ManifestationOrSymptom" + }], + "strength" : "example", + "description" : "Codes that describe the manifestation or symptoms of a condition.", + "valueSet" : "http://hl7.org/fhir/ValueSet/manifestation-or-symptom" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.reasonCode" + }, + { + "identity" : "w5", + "map" : "FiveWs.why[x]" + }, + { + "identity" : "sct-concept", + "map" : "< 404684003 |Clinical finding|" + }, + { + "identity" : "rim", + "map" : "[code=\"diagnosis\"].value" + }] + }, + { + "id" : "Condition.evidence.detail", + "path" : "Condition.evidence.detail", + "short" : "Supporting information found elsewhere", + "definition" : "Links to other relevant information, including pathology reports.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition.evidence.detail", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Resource"] + }], + "condition" : ["con-2"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.why[x]" + }, + { + "identity" : "rim", + "map" : ".self" + }] + }, + { + "id" : "Condition.note", + "path" : "Condition.note", + "short" : "Additional information about the Condition", + "definition" : "Additional information about the Condition. This is a general notes/comments entry for description of the Condition, its diagnosis and prognosis.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition.note", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Annotation" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.note" + }, + { + "identity" : "v2", + "map" : "NTE child of PRB" + }, + { + "identity" : "rim", + "map" : ".inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"annotation\"].value" + }] + }] + }, + "differential" : { + "element" : [{ + "id" : "Condition", + "path" : "Condition" + }, + { + "id" : "Condition.code", + "path" : "Condition.code", + "binding" : { + "strength" : "extensible", + "valueSet" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/disease-codes" + } + }] + } } \ No newline at end of file diff --git a/StructureDefinition-disease.profile.history.html b/StructureDefinition-disease.profile.history.html index a1f17938..c2cd3c80 100644 --- a/StructureDefinition-disease.profile.history.html +++ b/StructureDefinition-disease.profile.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -298,7 +298,7 @@ <h2 id="root">Resource Profile: Disease - Change History</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -356,7 +356,7 @@ <h2 id="root">Resource Profile: Disease - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-disease.profile.json.html b/StructureDefinition-disease.profile.json.html index 9fd49f80..cd3ccc8e 100644 --- a/StructureDefinition-disease.profile.json.html +++ b/StructureDefinition-disease.profile.json.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: Disease - JSON Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -342,7 +342,7 @@ <h2 id="root">Resource Profile: Disease - JSON Profile</h2> "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a>" : "Disease", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a>" : "NCPI Disease", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a>" : "draft", - "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>" : [ { @@ -2379,7 +2379,7 @@ <h2 id="root">Resource Profile: Disease - JSON Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-disease.profile.ttl.html b/StructureDefinition-disease.profile.ttl.html index df7ae916..2c182aa4 100644 --- a/StructureDefinition-disease.profile.ttl.html +++ b/StructureDefinition-disease.profile.ttl.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: Disease - TTL Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -329,11 +329,11 @@ <h2 id="root">Resource Profile: Disease - TTL Profile</h2> a fhir:StructureDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "disease"]; + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "disease"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description &amp; Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-disease-definitions.html#Condition\">Condition</a><a name=\"Condition\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/condition.html\">Condition</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Detailed information about conditions, problems or diagnoses</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-disease-definitions.html#Condition.code\">code</a><a name=\"Condition.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Identification of the condition, problem or diagnosis</span><br/><span style=\"font-weight:bold\">Binding: </span><a href=\"ValueSet-disease-codes.html\">Disease Codes</a> (<a href=\"http://hl7.org/fhir/R4/terminologies.html#extensible\" title=\"To be conformant, the concept in this element SHALL be from the specified value set if any of the codes within the value set can apply to the concept being communicated. If the value set does not cover the concept (based on human review), alternate codings (or, data type allowing, text) may be included instead.\">extensible</a>)</td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -342,14 +342,14 @@ <h2 id="root">Resource Profile: Disease - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "patient" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/disease"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Disease"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI Disease"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/disease"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Disease"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI Disease"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">fhir:StructureDefinition.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -365,9 +365,9 @@ <h2 id="root">Resource Profile: Disease - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Representation for a disease under study for a given research dataset."]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Representation for a disease under study for a given research dataset."]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping">fhir:StructureDefinition.mapping</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "workflow" ]; @@ -398,15 +398,15 @@ <h2 id="root">Resource Profile: Disease - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "sct-attr" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.uri">fhir:StructureDefinition.mapping.uri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://snomed.org/attributebinding" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.name">fhir:StructureDefinition.mapping.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "SNOMED CT Attribute Binding" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Condition"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Condition"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.baseDefinition">fhir:StructureDefinition.baseDefinition</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/Condition"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/Condition> - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot">fhir:StructureDefinition.snapshot</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot.element">fhir:StructureDefinition.snapshot.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2072,7 +2072,7 @@ <h2 id="root">Resource Profile: Disease - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 2; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.identity">fhir:ElementDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "rim" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.map">fhir:ElementDefinition.mapping.map</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> ".inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"annotation\"].value" ] ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential">fhir:StructureDefinition.differential</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential.element">fhir:StructureDefinition.differential.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2086,7 +2086,7 @@ <h2 id="root">Resource Profile: Disease - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.binding.valueSet">fhir:ElementDefinition.binding.valueSet</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/disease-codes"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/disease-codes> ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -2148,7 +2148,7 @@ <h2 id="root">Resource Profile: Disease - TTL Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-disease.profile.xml.html b/StructureDefinition-disease.profile.xml.html index 8566067b..4d8d2fd2 100644 --- a/StructureDefinition-disease.profile.xml.html +++ b/StructureDefinition-disease.profile.xml.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: Disease - XML Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -343,7 +343,7 @@ <h2 id="root">Resource Profile: Disease - XML Profile</h2> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Disease"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI Disease"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> - <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -2239,7 +2239,7 @@ <h2 id="root">Resource Profile: Disease - XML Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-disease.ttl b/StructureDefinition-disease.ttl index c0008fec..2f69fff4 100644 --- a/StructureDefinition-disease.ttl +++ b/StructureDefinition-disease.ttl @@ -7,11 +7,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/disease> a fhir:StructureDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "disease"]; + fhir:Resource.id [ fhir:value "disease"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-disease-definitions.html#Condition\">Condition</a><a name=\"Condition\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/condition.html\">Condition</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Detailed information about conditions, problems or diagnoses</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-disease-definitions.html#Condition.code\">code</a><a name=\"Condition.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Identification of the condition, problem or diagnosis</span><br/><span style=\"font-weight:bold\">Binding: </span><a href=\"ValueSet-disease-codes.html\">Disease Codes</a> (<a href=\"http://hl7.org/fhir/R4/terminologies.html#extensible\" title=\"To be conformant, the concept in this element SHALL be from the specified value set if any of the codes within the value set can apply to the concept being communicated. If the value set does not cover the concept (based on human review), alternate codings (or, data type allowing, text) may be included instead.\">extensible</a>)</td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -20,14 +20,14 @@ fhir:index 1; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; fhir:Extension.valueCode [ fhir:value "patient" ] - ]; - fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/disease"]; - fhir:StructureDefinition.version [ fhir:value "0.2.0"]; - fhir:StructureDefinition.name [ fhir:value "Disease"]; - fhir:StructureDefinition.title [ fhir:value "NCPI Disease"]; - fhir:StructureDefinition.status [ fhir:value "draft"]; - fhir:StructureDefinition.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/disease"]; # + fhir:StructureDefinition.version [ fhir:value "0.2.0"]; # + fhir:StructureDefinition.name [ fhir:value "Disease"]; # + fhir:StructureDefinition.title [ fhir:value "NCPI Disease"]; # + fhir:StructureDefinition.status [ fhir:value "draft"]; # + fhir:StructureDefinition.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:StructureDefinition.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -45,9 +45,9 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:StructureDefinition.description [ fhir:value "Representation for a disease under study for a given research dataset."]; - fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; + ]; # + fhir:StructureDefinition.description [ fhir:value "Representation for a disease under study for a given research dataset."]; # + fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; # fhir:StructureDefinition.mapping [ fhir:index 0; fhir:StructureDefinition.mapping.identity [ fhir:value "workflow" ]; @@ -78,15 +78,15 @@ fhir:StructureDefinition.mapping.identity [ fhir:value "sct-attr" ]; fhir:StructureDefinition.mapping.uri [ fhir:value "http://snomed.org/attributebinding" ]; fhir:StructureDefinition.mapping.name [ fhir:value "SNOMED CT Attribute Binding" ] - ]; - fhir:StructureDefinition.kind [ fhir:value "resource"]; - fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; - fhir:StructureDefinition.type [ fhir:value "Condition"]; + ]; # + fhir:StructureDefinition.kind [ fhir:value "resource"]; # + fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; # + fhir:StructureDefinition.type [ fhir:value "Condition"]; # fhir:StructureDefinition.baseDefinition [ fhir:value "http://hl7.org/fhir/StructureDefinition/Condition"; fhir:link <http://hl7.org/fhir/StructureDefinition/Condition> - ]; - fhir:StructureDefinition.derivation [ fhir:value "constraint"]; + ]; # + fhir:StructureDefinition.derivation [ fhir:value "constraint"]; # fhir:StructureDefinition.snapshot [ fhir:StructureDefinition.snapshot.element [ fhir:index 0; @@ -2141,7 +2141,7 @@ fhir:ElementDefinition.mapping.map [ fhir:value ".inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"annotation\"].value" ] ] ] - ]; + ]; # fhir:StructureDefinition.differential [ fhir:StructureDefinition.differential.element [ fhir:index 0; @@ -2159,7 +2159,7 @@ ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/StructureDefinition-disease.xlsx b/StructureDefinition-disease.xlsx index e3c2ec0a..1e689336 100644 Binary files a/StructureDefinition-disease.xlsx and b/StructureDefinition-disease.xlsx differ diff --git a/StructureDefinition-disease.xml b/StructureDefinition-disease.xml index 1757a765..2a6901e3 100644 --- a/StructureDefinition-disease.xml +++ b/StructureDefinition-disease.xml @@ -18,7 +18,7 @@ <name value="Disease"/> <title value="NCPI Disease"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/StructureDefinition-family-relationship-definitions.html b/StructureDefinition-family-relationship-definitions.html index 74904410..4045087b 100644 --- a/StructureDefinition-family-relationship-definitions.html +++ b/StructureDefinition-family-relationship-definitions.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -327,7 +327,8 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> </ul> <a name="tabs-diff"> </a> <div id="tabs-diff"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Observation"> </a><span style="color: grey">1.</span> <b>Observation</b><a href="#diff_Observation" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Observation.code"> </a><span style="color: grey">2.</span> <b>Observation.code</b><a href="#diff_Observation.code" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Pattern Value</td><td><valueCodeableConcept xmlns="http://hl7.org/fhir"><br/>  <coding><br/>    <system value="http://terminology.hl7.org/CodeSystem/v3-RoleCode"/><br/>    <code value="FAMMEMB"/><br/>    <display value="family member"/><br/>  </coding><br/></valueCodeableConcept><br/></td></tr> @@ -346,7 +347,8 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> </div> <a name="tabs-key"> </a> <div id="tabs-key"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="key_Observation"> </a><span style="color: grey">1.</span> <b>Observation</b><a href="#key_Observation" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><span style='color:DarkGray'><p>Measurements and simple assertions made about a patient, device or other subject.</p> </span></td></tr> @@ -453,12 +455,13 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> </div> <a name="tabs-snap"> </a> <div id="tabs-snap"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Observation"> </a><span style="color: grey">1.</span> <b>Observation</b><a href="#Observation" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>Measurements and simple assertions made about a patient, device or other subject.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Vital SignsMeasurementResultsTests</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Vital Signs, Measurement, Results, Tests</td></tr> <tr><td>Comments</td><td><p>Used for simple observations such as device measurements, laboratory atomic results, vital signs, height, weight, smoking status, comments, etc. Other resources are used to provide context for observations such as laboratory reports, etc.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Observation.id"> </a><span style="color: grey">2.</span> <b>Observation.id</b><a href="#Observation.id" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -502,7 +505,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#Narrative">Narrative</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrativehtmlxhtmldisplay</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrative, html, xhtml, display</td></tr> <tr><td>Comments</td><td><p>Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a "text blob" or where text is additionally entered raw or narrated and encoded information is added later.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -512,7 +515,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/resource.html">Resource</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resourcesanonymous resourcescontained resources</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resources, anonymous resources, contained resources</td></tr> <tr><td>Comments</td><td><p>This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Observation.extension"> </a><span style="color: grey">8.</span> <b>Observation.extension</b><a href="#Observation.extension" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -520,7 +523,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -534,7 +537,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -553,7 +556,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>A plan, proposal or order that is fulfilled in whole or in part by this event. For example, a MedicationRequest may require a patient to have laboratory test performed before it is dispensed.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/careplan.html" title="http://hl7.org/fhir/StructureDefinition/CarePlan">CarePlan</a><a href="http://hl7.org/fhir/R4/devicerequest.html" title="http://hl7.org/fhir/StructureDefinition/DeviceRequest">DeviceRequest</a><a href="http://hl7.org/fhir/R4/immunizationrecommendation.html" title="http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation">ImmunizationRecommendation</a><a href="http://hl7.org/fhir/R4/medicationrequest.html" title="http://hl7.org/fhir/StructureDefinition/MedicationRequest">MedicationRequest</a><a href="http://hl7.org/fhir/R4/nutritionorder.html" title="http://hl7.org/fhir/StructureDefinition/NutritionOrder">NutritionOrder</a><a href="http://hl7.org/fhir/R4/servicerequest.html" title="http://hl7.org/fhir/StructureDefinition/ServiceRequest">ServiceRequest</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/careplan.html" title="http://hl7.org/fhir/StructureDefinition/CarePlan">CarePlan</a>|<a href="http://hl7.org/fhir/R4/devicerequest.html" title="http://hl7.org/fhir/StructureDefinition/DeviceRequest">DeviceRequest</a>|<a href="http://hl7.org/fhir/R4/immunizationrecommendation.html" title="http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation">ImmunizationRecommendation</a>|<a href="http://hl7.org/fhir/R4/medicationrequest.html" title="http://hl7.org/fhir/StructureDefinition/MedicationRequest">MedicationRequest</a>|<a href="http://hl7.org/fhir/R4/nutritionorder.html" title="http://hl7.org/fhir/StructureDefinition/NutritionOrder">NutritionOrder</a>|<a href="http://hl7.org/fhir/R4/servicerequest.html" title="http://hl7.org/fhir/StructureDefinition/ServiceRequest">ServiceRequest</a>)</td></tr> <tr><td>Requirements</td><td><p>Allows tracing of authorization for the event and tracking whether proposals/recommendations were acted upon.</p> </td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Fulfills</td></tr> @@ -563,7 +566,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>A larger event of which this particular Observation is a component or step. For example, an observation as part of a procedure.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/medicationadministration.html" title="http://hl7.org/fhir/StructureDefinition/MedicationAdministration">MedicationAdministration</a><a href="http://hl7.org/fhir/R4/medicationdispense.html" title="http://hl7.org/fhir/StructureDefinition/MedicationDispense">MedicationDispense</a><a href="http://hl7.org/fhir/R4/medicationstatement.html" title="http://hl7.org/fhir/StructureDefinition/MedicationStatement">MedicationStatement</a><a href="http://hl7.org/fhir/R4/procedure.html" title="http://hl7.org/fhir/StructureDefinition/Procedure">Procedure</a><a href="http://hl7.org/fhir/R4/immunization.html" title="http://hl7.org/fhir/StructureDefinition/Immunization">Immunization</a><a href="http://hl7.org/fhir/R4/imagingstudy.html" title="http://hl7.org/fhir/StructureDefinition/ImagingStudy">ImagingStudy</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/medicationadministration.html" title="http://hl7.org/fhir/StructureDefinition/MedicationAdministration">MedicationAdministration</a>|<a href="http://hl7.org/fhir/R4/medicationdispense.html" title="http://hl7.org/fhir/StructureDefinition/MedicationDispense">MedicationDispense</a>|<a href="http://hl7.org/fhir/R4/medicationstatement.html" title="http://hl7.org/fhir/StructureDefinition/MedicationStatement">MedicationStatement</a>|<a href="http://hl7.org/fhir/R4/procedure.html" title="http://hl7.org/fhir/StructureDefinition/Procedure">Procedure</a>|<a href="http://hl7.org/fhir/R4/immunization.html" title="http://hl7.org/fhir/StructureDefinition/Immunization">Immunization</a>|<a href="http://hl7.org/fhir/R4/imagingstudy.html" title="http://hl7.org/fhir/StructureDefinition/ImagingStudy">ImagingStudy</a>)</td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Container</td></tr> <tr><td>Comments</td><td><p>To link an Observation to an Encounter use <code>encounter</code>. See the <a href="http://hl7.org/fhir/R4/observation.html#obsgrouping">Notes</a> below for guidance on referencing another Observation.</p> </td></tr> @@ -625,7 +628,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -658,7 +661,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The patient, or group of patients, location, or device this observation is about and into whose record the observation is placed. If the actual focus of the observation is different from the subject (or a sample of, part, or region of the subject), the <code>focus</code> element or the <code>code</code> itself specifies the actual focus of the observation.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a><a href="http://hl7.org/fhir/R4/location.html" title="http://hl7.org/fhir/StructureDefinition/Location">Location</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a>|<a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a>|<a href="http://hl7.org/fhir/R4/location.html" title="http://hl7.org/fhir/StructureDefinition/Location">Location</a>)</td></tr> <tr><td>Requirements</td><td><p>Observations have no value if you don't know who or what they're about.</p> </td></tr> <tr><td>Comments</td><td><p>One would expect this element to be a cardinality of 1..1. The only circumstance in which the subject can be missing is when the observation is made by a device that does not know the patient. In this case, the observation SHALL be matched to a patient through some context/channel matching technique, and at this point, the observation should be updated.</p> @@ -669,7 +672,8 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>)</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/versions.html#std-process">Standards Status</a></td><td>Trial Use (from Normative)</td></tr> <tr><td>Comments</td><td><p>Typically, an observation is made about the subject - a patient, or group of patients, location, or device - and the distinction between the subject and what is directly measured for an observation is specified in the observation code itself ( e.g., "Blood Glucose") and does not need to be represented separately using this element. Use <code>specimen</code> if a reference to a specimen is required. If a code is required instead of a resource use either <code>bodysite</code> for bodysites or the standard extension <a href="http://hl7.org/fhir/R4/extension-observation-focuscode.html">focusCode</a>.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -678,7 +682,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The healthcare event (e.g. a patient and healthcare provider interaction) during which this observation is made.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html" title="http://hl7.org/fhir/StructureDefinition/Encounter">Encounter</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html" title="http://hl7.org/fhir/StructureDefinition/Encounter">Encounter</a>)</td></tr> <tr><td>Requirements</td><td><p>For some observations it may be important to know the link between an observation and a particular encounter.</p> </td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Context</td></tr> @@ -712,7 +716,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Who was responsible for asserting the observed value as "true".</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a><a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a><a href="http://hl7.org/fhir/R4/careteam.html" title="http://hl7.org/fhir/StructureDefinition/CareTeam">CareTeam</a><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a><a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a>|<a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a>|<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>|<a href="http://hl7.org/fhir/R4/careteam.html" title="http://hl7.org/fhir/StructureDefinition/CareTeam">CareTeam</a>|<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>)</td></tr> <tr><td>Requirements</td><td><p>May give a degree of confidence in the observation and also indicates where follow-up questions should be directed.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -816,7 +820,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The specimen that was used when this observation was made.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/specimen.html" title="http://hl7.org/fhir/StructureDefinition/Specimen">Specimen</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/specimen.html" title="http://hl7.org/fhir/StructureDefinition/Specimen">Specimen</a>)</td></tr> <tr><td>Comments</td><td><p>Should only be used if not implicit in code found in <code>Observation.code</code>. Observations are not made on specimens themselves; they are made on a subject, but in many cases by the means of a specimen. Note that although specimens are often involved, they are not always tracked and reported explicitly. Also note that observation resources may be used in contexts that track the specimen explicitly (e.g. Diagnostic Report).</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -825,7 +829,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The device used to generate the observation data.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a><a href="http://hl7.org/fhir/R4/devicemetric.html" title="http://hl7.org/fhir/StructureDefinition/DeviceMetric">DeviceMetric</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a>|<a href="http://hl7.org/fhir/R4/devicemetric.html" title="http://hl7.org/fhir/StructureDefinition/DeviceMetric">DeviceMetric</a>)</td></tr> <tr><td>Comments</td><td><p>Note that this is not meant to represent a device involved in the transmission of the result, e.g., a gateway. Such devices may be documented using the Provenance resource where relevant.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -852,7 +856,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -866,7 +870,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -933,7 +937,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>This observation is a group observation (e.g. a battery, a panel of tests, a set of vital sign measurements) that includes the target as a member of the group.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a><a href="http://hl7.org/fhir/R4/questionnaireresponse.html" title="http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse">QuestionnaireResponse</a><a href="http://hl7.org/fhir/R4/molecularsequence.html" title="http://hl7.org/fhir/StructureDefinition/MolecularSequence">MolecularSequence</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a>|<a href="http://hl7.org/fhir/R4/questionnaireresponse.html" title="http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse">QuestionnaireResponse</a>|<a href="http://hl7.org/fhir/R4/molecularsequence.html" title="http://hl7.org/fhir/StructureDefinition/MolecularSequence">MolecularSequence</a>)</td></tr> <tr><td>Comments</td><td><p>When using this element, an observation will typically have either a value or a set of related resources, although both may be present in some cases. For a discussion on the ways Observations can assembled in groups together, see <a href="http://hl7.org/fhir/R4/observation.html#obsgrouping">Notes</a> below. Note that a system may calculate results from <a href="http://hl7.org/fhir/R4/questionnaireresponse.html">QuestionnaireResponse</a> into a final score and represent the score as an Observation.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -942,7 +946,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The target resource that represents a measurement from which this observation value is derived. For example, a calculated anion gap or a fetal measurement based on an ultrasound image.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/documentreference.html" title="http://hl7.org/fhir/StructureDefinition/DocumentReference">DocumentReference</a><a href="http://hl7.org/fhir/R4/imagingstudy.html" title="http://hl7.org/fhir/StructureDefinition/ImagingStudy">ImagingStudy</a><a href="http://hl7.org/fhir/R4/media.html" title="http://hl7.org/fhir/StructureDefinition/Media">Media</a><a href="http://hl7.org/fhir/R4/questionnaireresponse.html" title="http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse">QuestionnaireResponse</a><a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a><a href="http://hl7.org/fhir/R4/molecularsequence.html" title="http://hl7.org/fhir/StructureDefinition/MolecularSequence">MolecularSequence</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/documentreference.html" title="http://hl7.org/fhir/StructureDefinition/DocumentReference">DocumentReference</a>|<a href="http://hl7.org/fhir/R4/imagingstudy.html" title="http://hl7.org/fhir/StructureDefinition/ImagingStudy">ImagingStudy</a>|<a href="http://hl7.org/fhir/R4/media.html" title="http://hl7.org/fhir/StructureDefinition/Media">Media</a>|<a href="http://hl7.org/fhir/R4/questionnaireresponse.html" title="http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse">QuestionnaireResponse</a>|<a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a>|<a href="http://hl7.org/fhir/R4/molecularsequence.html" title="http://hl7.org/fhir/StructureDefinition/MolecularSequence">MolecularSequence</a>)</td></tr> <tr><td>Comments</td><td><p>All the reference choices that are listed in this element can represent clinical observations and other measurements that may be the source for a derived value. The most common reference will be another Observation. For a discussion on the ways Observations can assembled in groups together, see <a href="http://hl7.org/fhir/R4/observation.html#obsgrouping">Notes</a> below.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -969,7 +973,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -983,7 +987,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -1111,7 +1115,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Detailed Descriptions</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-family-relationship-examples.html b/StructureDefinition-family-relationship-examples.html index 04ff6038..a638e63d 100644 --- a/StructureDefinition-family-relationship-examples.html +++ b/StructureDefinition-family-relationship-examples.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Examples</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -396,7 +396,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Examples</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-family-relationship-mappings.html b/StructureDefinition-family-relationship-mappings.html index a4bcb23f..adf61286 100644 --- a/StructureDefinition-family-relationship-mappings.html +++ b/StructureDefinition-family-relationship-mappings.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Mappings</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -522,7 +522,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Mappings</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-family-relationship-testing.html b/StructureDefinition-family-relationship-testing.html index c253fa96..809f3965 100644 --- a/StructureDefinition-family-relationship-testing.html +++ b/StructureDefinition-family-relationship-testing.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Testing</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -362,7 +362,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Testing</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-family-relationship.html b/StructureDefinition-family-relationship.html index c54a9ae4..cc4a6fb2 100644 --- a/StructureDefinition-family-relationship.html +++ b/StructureDefinition-family-relationship.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -321,7 +321,7 @@ <h2 id="root">Resource Profile: Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -513,7 +513,7 @@ <h4>Constraints</h4> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white" id="a13.g"><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck110.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vline.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_datatype.gif" alt="." style="background-color: white; background-color: inherit" title="Data Type" class="hierarchy"/> <a href="StructureDefinition-family-relationship-definitions.html#Observation.code.coding" title="A reference to a code defined by a terminology system.">coding</a><a name="Observation.code.coding"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..*</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#Coding">Coding</a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Code defined by a terminology system<br/></td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7" id="a13.h"><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck100.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vline.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin_end.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <a href="StructureDefinition-family-relationship-definitions.html#Observation.code.text" title="A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user.">text</a><a name="Observation.code.text"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#string">string</a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Plain text representation of the concept<br/><span style="font-weight:bold">Required Pattern: </span><span style="color: darkgreen">Family Relationship</span></td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white" id="a14."><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_reference.png" alt="." style="background-color: white; background-color: inherit" title="Reference to another Resource" class="hierarchy"/> <a href="StructureDefinition-family-relationship-definitions.html#Observation.subject" title="The patient, or group of patients, location, or device this observation is about and into whose record the observation is placed. If the actual focus of the observation is different from the subject (or a sample of, part, or region of the subject), the `focus` element or the `code` itself specifies the actual focus of the observation.">subject</a><a name="Observation.subject"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/references.html">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html">Patient</a> | <a href="http://hl7.org/fhir/R4/group.html">Group</a> | <a href="http://hl7.org/fhir/R4/device.html">Device</a> | <a href="http://hl7.org/fhir/R4/location.html">Location</a>)</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Who and/or what the observation is about</td></tr> -<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7" id="a15."><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_reference.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Reference to another Resource" class="hierarchy"/> <a href="StructureDefinition-family-relationship-definitions.html#Observation.focus" title="The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.">focus</a><a name="Observation.focus"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..*</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/references.html">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html">Resource</a>)</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">What the observation is about, when it is not about the subject of record<br/></td></tr> +<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7" id="a15."><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_reference.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Reference to another Resource" class="hierarchy"/> <a href="StructureDefinition-family-relationship-definitions.html#Observation.focus" title="The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.">focus</a><a name="Observation.focus"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span><a style="padding-left: 3px; padding-right: 3px; border: 1px grey solid; font-weight: bold; color: black; background-color: #fff5e6" href="http://hl7.org/fhir/R4/versions.html#std-process" title="Standards Status = Trial Use">TU</a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..*</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/references.html">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html">Resource</a>)</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">What the observation is about, when it is not about the subject of record<br/></td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white" id="a16."><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_reference.png" alt="." style="background-color: white; background-color: inherit" title="Reference to another Resource" class="hierarchy"/> <a href="StructureDefinition-family-relationship-definitions.html#Observation.encounter" title="The healthcare event (e.g. a patient and healthcare provider interaction) during which this observation is made.">encounter</a><a name="Observation.encounter"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/references.html">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html">Encounter</a>)</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Healthcare event during which this observation is made</td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7" id="a17."><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img onClick="tableRowAction(this)" src="tbl_vjoin-open.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_choice.gif" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Choice of Types" class="hierarchy"/> <a href="StructureDefinition-family-relationship-definitions.html#Observation.effective[x]" title="The time or time-period the observed value is asserted as being true. For biological subjects - e.g. human patients - this is usually called the "physiologically relevant time". This is usually either the time of the procedure or of specimen collection, but very often the source of the date/time is not known, only the date/time itself.">effective[x]</a><a name="Observation.effective_x_"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Clinically relevant time/time-period for observation</td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white" id="a17.a"><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck110.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vline.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: white; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <span title="Base StructureDefinition for dateTime Type: A date, date-time or partial date (e.g. just year or year + month). If hours and minutes are specified, a time zone SHALL be populated. The format is a union of the schema types gYear, gYearMonth, date and dateTime. Seconds must be provided due to schema type constraints but may be zero-filled and may be ignored. Dates SHALL be valid dates.">effectiveDateTime</span></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">dateTime</a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"></td></tr> @@ -875,7 +875,7 @@ <h4>Constraints</h4> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white" id="a13.g"><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck110.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vline.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_datatype.gif" alt="." style="background-color: white; background-color: inherit" title="Data Type" class="hierarchy"/> <a href="StructureDefinition-family-relationship-definitions.html#Observation.code.coding" title="A reference to a code defined by a terminology system.">coding</a><a name="Observation.code.coding"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..*</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#Coding">Coding</a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Code defined by a terminology system<br/></td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7" id="a13.h"><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck100.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vline.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin_end.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <a href="StructureDefinition-family-relationship-definitions.html#Observation.code.text" title="A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user.">text</a><a name="Observation.code.text"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#string">string</a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Plain text representation of the concept<br/><span style="font-weight:bold">Required Pattern: </span><span style="color: darkgreen">Family Relationship</span></td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white" id="a14."><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_reference.png" alt="." style="background-color: white; background-color: inherit" title="Reference to another Resource" class="hierarchy"/> <a href="StructureDefinition-family-relationship-definitions.html#Observation.subject" title="The patient, or group of patients, location, or device this observation is about and into whose record the observation is placed. If the actual focus of the observation is different from the subject (or a sample of, part, or region of the subject), the `focus` element or the `code` itself specifies the actual focus of the observation.">subject</a><a name="Observation.subject"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/references.html">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html">Patient</a> | <a href="http://hl7.org/fhir/R4/group.html">Group</a> | <a href="http://hl7.org/fhir/R4/device.html">Device</a> | <a href="http://hl7.org/fhir/R4/location.html">Location</a>)</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Who and/or what the observation is about</td></tr> -<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7" id="a15."><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_reference.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Reference to another Resource" class="hierarchy"/> <a href="StructureDefinition-family-relationship-definitions.html#Observation.focus" title="The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.">focus</a><a name="Observation.focus"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..*</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/references.html">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html">Resource</a>)</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">What the observation is about, when it is not about the subject of record<br/></td></tr> +<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7" id="a15."><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_reference.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Reference to another Resource" class="hierarchy"/> <a href="StructureDefinition-family-relationship-definitions.html#Observation.focus" title="The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.">focus</a><a name="Observation.focus"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span><a style="padding-left: 3px; padding-right: 3px; border: 1px grey solid; font-weight: bold; color: black; background-color: #fff5e6" href="http://hl7.org/fhir/R4/versions.html#std-process" title="Standards Status = Trial Use">TU</a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..*</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/references.html">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html">Resource</a>)</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">What the observation is about, when it is not about the subject of record<br/></td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white" id="a16."><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_reference.png" alt="." style="background-color: white; background-color: inherit" title="Reference to another Resource" class="hierarchy"/> <a href="StructureDefinition-family-relationship-definitions.html#Observation.encounter" title="The healthcare event (e.g. a patient and healthcare provider interaction) during which this observation is made.">encounter</a><a name="Observation.encounter"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/references.html">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html">Encounter</a>)</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Healthcare event during which this observation is made</td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7" id="a17."><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img onClick="tableRowAction(this)" src="tbl_vjoin-open.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_choice.gif" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Choice of Types" class="hierarchy"/> <a href="StructureDefinition-family-relationship-definitions.html#Observation.effective[x]" title="The time or time-period the observed value is asserted as being true. For biological subjects - e.g. human patients - this is usually called the "physiologically relevant time". This is usually either the time of the procedure or of specimen collection, but very often the source of the date/time is not known, only the date/time itself.">effective[x]</a><a name="Observation.effective_x_"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Clinically relevant time/time-period for observation</td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white" id="a17.a"><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck110.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vline.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: white; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <span title="Base StructureDefinition for dateTime Type: A date, date-time or partial date (e.g. just year or year + month). If hours and minutes are specified, a time zone SHALL be populated. The format is a union of the schema types gYear, gYearMonth, date and dateTime. Seconds must be provided due to schema type constraints but may be zero-filled and may be ignored. Dates SHALL be valid dates.">effectiveDateTime</span></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">dateTime</a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"></td></tr> @@ -1170,7 +1170,7 @@ <h4>Constraints</h4> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-family-relationship.json b/StructureDefinition-family-relationship.json index 40a4cd29..807a6233 100644 --- a/StructureDefinition-family-relationship.json +++ b/StructureDefinition-family-relationship.json @@ -1,3010 +1,2558 @@ -{ - "resourceType": "StructureDefinition", - "id": "family-relationship", - "text": { - "status": "extensions", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-family-relationship-definitions.html#Observation\">Observation</a><a name=\"Observation\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observation.html\">Observation</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Measurements and simple assertions</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-family-relationship-definitions.html#Observation.code\">code</a><a name=\"Observation.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Type of observation (code / type)</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck111.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#CodeableConcept.coding\">coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..*</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Code defined by a terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">(complex)</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1110.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">http://terminology.hl7.org/CodeSystem/v3-RoleCode</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1110.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">FAMMEMB</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1100.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">family member</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck100.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-family-relationship-definitions.html#Observation.code.text\">text</a><a name=\"Observation.code.text\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Plain text representation of the concept</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">Family Relationship</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck12.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_slice.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Slice Definition\" class=\"hierarchy\"/> <a style=\"font-style: italic\" href=\"StructureDefinition-family-relationship-definitions.html#Observation.value[x]\">value[x]</a><a name=\"Observation.value_x_\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"font-style: italic\"/><span style=\"opacity: 0.5; font-style: italic\">0</span><span style=\"opacity: 0.5; font-style: italic\">..</span><span style=\"opacity: 0.5; font-style: italic\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"font-style: italic\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5; font-style: italic\">Actual result</span><br style=\"font-style: italic\"/><span style=\"font-weight:bold; font-style: italic\">Slice: </span><span style=\"font-style: italic\">Unordered, Open by type:$this</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-family-relationship-definitions.html#Observation.valueCodeableConcept\">valueCodeableConcept</a><a name=\"Observation.valueCodeableConcept\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">0..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Actual result</span><br/><span style=\"font-weight:bold\">Binding: </span><a href=\"http://terminology.hl7.org/5.0.0/ValueSet-v3-FamilyMember.html\">FamilyMember</a> (<a href=\"http://hl7.org/fhir/R4/terminologies.html#extensible\" title=\"To be conformant, the concept in this element SHALL be from the specified value set if any of the codes within the value set can apply to the concept being communicated. If the value set does not cover the concept (based on human review), alternate codings (or, data type allowing, text) may be included instead.\">extensible</a>)</td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - }, - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", - "valueString": "Clinical.Diagnostics" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", - "valueCode": "patient" - } - ], - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship", - "version": "0.2.0", - "name": "FamilyRelationship", - "title": "NCPI Family Relationship", - "status": "draft", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "Representation of a family relationship.", - "fhirVersion": "4.0.1", - "mapping": [ - { - "identity": "workflow", - "uri": "http://hl7.org/fhir/workflow", - "name": "Workflow Pattern" - }, - { - "identity": "sct-concept", - "uri": "http://snomed.info/conceptdomain", - "name": "SNOMED CT Concept Domain Binding" - }, - { - "identity": "v2", - "uri": "http://hl7.org/v2", - "name": "HL7 v2 Mapping" - }, - { - "identity": "rim", - "uri": "http://hl7.org/v3", - "name": "RIM Mapping" - }, - { - "identity": "w5", - "uri": "http://hl7.org/fhir/fivews", - "name": "FiveWs Pattern Mapping" - }, - { - "identity": "sct-attr", - "uri": "http://snomed.org/attributebinding", - "name": "SNOMED CT Attribute Binding" - } - ], - "kind": "resource", - "abstract": false, - "type": "Observation", - "baseDefinition": "http://hl7.org/fhir/StructureDefinition/Observation", - "derivation": "constraint", - "snapshot": { - "element": [ - { - "id": "Observation", - "path": "Observation", - "short": "Measurements and simple assertions", - "definition": "Measurements and simple assertions made about a patient, device or other subject.", - "comment": "Used for simple observations such as device measurements, laboratory atomic results, vital signs, height, weight, smoking status, comments, etc. Other resources are used to provide context for observations such as laboratory reports, etc.", - "alias": [ - "Vital Signs", - "Measurement", - "Results", - "Tests" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation", - "min": 0, - "max": "*" - }, - "constraint": [ - { - "key": "dom-2", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL NOT contain nested Resources", - "expression": "contained.contained.empty()", - "xpath": "not(parent::f:contained and f:contained)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-3", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", - "expression": "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", - "xpath": "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-4", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", - "expression": "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-5", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a security label", - "expression": "contained.meta.security.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:security))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", - "valueBoolean": true - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", - "valueMarkdown": "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." - } - ], - "key": "dom-6", - "severity": "warning", - "human": "A resource should have narrative for robust management", - "expression": "text.`div`.exists()", - "xpath": "exists(f:text/h:div)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "obs-6", - "severity": "error", - "human": "dataAbsentReason SHALL only be present if Observation.value[x] is not present", - "expression": "dataAbsentReason.empty() or value.empty()", - "xpath": "not(exists(f:dataAbsentReason)) or (not(exists(*[starts-with(local-name(.), 'value')])))", - "source": "http://hl7.org/fhir/StructureDefinition/Observation" - }, - { - "key": "obs-7", - "severity": "error", - "human": "If Observation.code is the same as an Observation.component.code then the value element associated with the code SHALL NOT be present", - "expression": "value.empty() or component.code.where(coding.intersect(%resource.code.coding).exists()).empty()", - "xpath": "not(f:*[starts-with(local-name(.), 'value')] and (for $coding in f:code/f:coding return f:component/f:code/f:coding[f:code/@value=$coding/f:code/@value] [f:system/@value=$coding/f:system/@value]))", - "source": "http://hl7.org/fhir/StructureDefinition/Observation" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Entity. Role, or Act" - }, - { - "identity": "workflow", - "map": "Event" - }, - { - "identity": "sct-concept", - "map": "< 363787002 |Observable entity|" - }, - { - "identity": "v2", - "map": "OBX" - }, - { - "identity": "rim", - "map": "Observation[classCode=OBS, moodCode=EVN]" - } - ] - }, - { - "id": "Observation.id", - "path": "Observation.id", - "short": "Logical id of this artifact", - "definition": "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", - "comment": "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "id" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "Observation.meta", - "path": "Observation.meta", - "short": "Metadata about the resource", - "definition": "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.meta", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Meta" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "Observation.implicitRules", - "path": "Observation.implicitRules", - "short": "A set of rules under which this content was created", - "definition": "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", - "comment": "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.implicitRules", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", - "isSummary": true - }, - { - "id": "Observation.language", - "path": "Observation.language", - "short": "Language of the resource content", - "definition": "The base language in which the resource is written.", - "comment": "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", - "min": 0, - "max": "1", - "base": { - "path": "Resource.language", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", - "valueCanonical": "http://hl7.org/fhir/ValueSet/all-languages" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "Language" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "preferred", - "description": "A human language.", - "valueSet": "http://hl7.org/fhir/ValueSet/languages" - } - }, - { - "id": "Observation.text", - "path": "Observation.text", - "short": "Text summary of the resource, for human interpretation", - "definition": "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", - "comment": "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", - "alias": [ - "narrative", - "html", - "xhtml", - "display" - ], - "min": 0, - "max": "1", - "base": { - "path": "DomainResource.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Narrative" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Act.text?" - } - ] - }, - { - "id": "Observation.contained", - "path": "Observation.contained", - "short": "Contained, inline Resources", - "definition": "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", - "comment": "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", - "alias": [ - "inline resources", - "anonymous resources", - "contained resources" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.contained", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Resource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.extension", - "path": "Observation.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.modifierExtension", - "path": "Observation.modifierExtension", - "short": "Extensions that cannot be ignored", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.identifier", - "path": "Observation.identifier", - "short": "Business Identifier for observation", - "definition": "A unique identifier assigned to this observation.", - "requirements": "Allows observations to be distinguished and referenced.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.identifier", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Identifier" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.identifier" - }, - { - "identity": "w5", - "map": "FiveWs.identifier" - }, - { - "identity": "v2", - "map": "OBX.21 For OBX segments from systems without OBX-21 support a combination of ORC/OBR and OBX must be negotiated between trading partners to uniquely identify the OBX segment. Depending on how V2 has been implemented each of these may be an option: 1) OBR-3 + OBX-3 + OBX-4 or 2) OBR-3 + OBR-4 + OBX-3 + OBX-4 or 2) some other way to uniquely ID the OBR/ORC + OBX-3 + OBX-4." - }, - { - "identity": "rim", - "map": "id" - } - ] - }, - { - "id": "Observation.basedOn", - "path": "Observation.basedOn", - "short": "Fulfills plan, proposal or order", - "definition": "A plan, proposal or order that is fulfilled in whole or in part by this event. For example, a MedicationRequest may require a patient to have laboratory test performed before it is dispensed.", - "requirements": "Allows tracing of authorization for the event and tracking whether proposals/recommendations were acted upon.", - "alias": [ - "Fulfills" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation.basedOn", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/CarePlan", - "http://hl7.org/fhir/StructureDefinition/DeviceRequest", - "http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation", - "http://hl7.org/fhir/StructureDefinition/MedicationRequest", - "http://hl7.org/fhir/StructureDefinition/NutritionOrder", - "http://hl7.org/fhir/StructureDefinition/ServiceRequest" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.basedOn" - }, - { - "identity": "v2", - "map": "ORC" - }, - { - "identity": "rim", - "map": ".inboundRelationship[typeCode=COMP].source[moodCode=EVN]" - } - ] - }, - { - "id": "Observation.partOf", - "path": "Observation.partOf", - "short": "Part of referenced event", - "definition": "A larger event of which this particular Observation is a component or step. For example, an observation as part of a procedure.", - "comment": "To link an Observation to an Encounter use `encounter`. See the [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below for guidance on referencing another Observation.", - "alias": [ - "Container" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation.partOf", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/MedicationAdministration", - "http://hl7.org/fhir/StructureDefinition/MedicationDispense", - "http://hl7.org/fhir/StructureDefinition/MedicationStatement", - "http://hl7.org/fhir/StructureDefinition/Procedure", - "http://hl7.org/fhir/StructureDefinition/Immunization", - "http://hl7.org/fhir/StructureDefinition/ImagingStudy" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.partOf" - }, - { - "identity": "v2", - "map": "Varies by domain" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=FLFS].target" - } - ] - }, - { - "id": "Observation.status", - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-display-hint", - "valueString": "default: final" - } - ], - "path": "Observation.status", - "short": "registered | preliminary | final | amended +", - "definition": "The status of the result value.", - "comment": "This element is labeled as a modifier because the status contains codes that mark the resource as not currently valid.", - "requirements": "Need to track the status of individual results. Some results are finalized before the whole report is finalized.", - "min": 1, - "max": "1", - "base": { - "path": "Observation.status", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid", - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationStatus" - } - ], - "strength": "required", - "description": "Codes providing the status of an observation.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-status|4.0.1" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.status" - }, - { - "identity": "w5", - "map": "FiveWs.status" - }, - { - "identity": "sct-concept", - "map": "< 445584004 |Report by finality status|" - }, - { - "identity": "v2", - "map": "OBX-11" - }, - { - "identity": "rim", - "map": "status Amended & Final are differentiated by whether it is the subject of a ControlAct event with a type of \"revise\"" - } - ] - }, - { - "id": "Observation.category", - "path": "Observation.category", - "short": "Classification of type of observation", - "definition": "A code that classifies the general type of observation being made.", - "comment": "In addition to the required category valueset, this element allows various categorization schemes based on the owner’s definition of the category and effectively multiple categories can be used at once. The level of granularity is defined by the category concepts in the value set.", - "requirements": "Used for filtering what observations are retrieved and displayed.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.category", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationCategory" - } - ], - "strength": "preferred", - "description": "Codes for high level observation categories.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-category" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.class" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=\"COMP].target[classCode=\"LIST\", moodCode=\"EVN\"].code" - } - ] - }, - { - "id": "Observation.code", - "path": "Observation.code", - "short": "Type of observation (code / type)", - "definition": "Describes what was observed. Sometimes this is called the observation \"name\".", - "comment": "*All* code-value and, if present, component.code-component.value pairs need to be taken into account to correctly understand the meaning of the observation.", - "requirements": "Knowing what kind of observation is being made is essential to understanding the observation.", - "alias": [ - "Name" - ], - "min": 1, - "max": "1", - "base": { - "path": "Observation.code", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "patternCodeableConcept": { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/v3-RoleCode", - "code": "FAMMEMB", - "display": "family member" - } - ] - }, - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationCode" - } - ], - "strength": "example", - "description": "Codes identifying names of simple observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-codes" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.code" - }, - { - "identity": "w5", - "map": "FiveWs.what[x]" - }, - { - "identity": "sct-concept", - "map": "< 363787002 |Observable entity| OR < 386053000 |Evaluation procedure|" - }, - { - "identity": "v2", - "map": "OBX-3" - }, - { - "identity": "rim", - "map": "code" - }, - { - "identity": "sct-attr", - "map": "116680003 |Is a|" - } - ] - }, - { - "id": "Observation.code.id", - "path": "Observation.code.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.code.extension", - "path": "Observation.code.extension", - "slicing": { - "discriminator": [ - { - "type": "value", - "path": "url" - } - ], - "description": "Extensions are always sliced by (at least) url", - "rules": "open" - }, - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.code.coding", - "path": "Observation.code.coding", - "short": "Code defined by a terminology system", - "definition": "A reference to a code defined by a terminology system.", - "comment": "Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.", - "requirements": "Allows for alternative encodings within a code system, and translations to other code systems.", - "min": 0, - "max": "*", - "base": { - "path": "CodeableConcept.coding", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Coding" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "C*E.1-8, C*E.10-22" - }, - { - "identity": "rim", - "map": "union(., ./translation)" - }, - { - "identity": "orim", - "map": "fhir:CodeableConcept.coding rdfs:subPropertyOf dt:CD.coding" - } - ] - }, - { - "id": "Observation.code.text", - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable", - "valueBoolean": true - } - ], - "path": "Observation.code.text", - "short": "Plain text representation of the concept", - "definition": "A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user.", - "comment": "Very often the text is the same as a displayName of one of the codings.", - "requirements": "The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source.", - "min": 0, - "max": "1", - "base": { - "path": "CodeableConcept.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "patternString": "Family Relationship", - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "C*E.9. But note many systems use C*E.2 for this" - }, - { - "identity": "rim", - "map": "./originalText[mediaType/code=\"text/plain\"]/data" - }, - { - "identity": "orim", - "map": "fhir:CodeableConcept.text rdfs:subPropertyOf dt:CD.originalText" - } - ] - }, - { - "id": "Observation.subject", - "path": "Observation.subject", - "short": "Who and/or what the observation is about", - "definition": "The patient, or group of patients, location, or device this observation is about and into whose record the observation is placed. If the actual focus of the observation is different from the subject (or a sample of, part, or region of the subject), the `focus` element or the `code` itself specifies the actual focus of the observation.", - "comment": "One would expect this element to be a cardinality of 1..1. The only circumstance in which the subject can be missing is when the observation is made by a device that does not know the patient. In this case, the observation SHALL be matched to a patient through some context/channel matching technique, and at this point, the observation should be updated.", - "requirements": "Observations have no value if you don't know who or what they're about.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.subject", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Patient", - "http://hl7.org/fhir/StructureDefinition/Group", - "http://hl7.org/fhir/StructureDefinition/Device", - "http://hl7.org/fhir/StructureDefinition/Location" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.subject" - }, - { - "identity": "w5", - "map": "FiveWs.subject[x]" - }, - { - "identity": "v2", - "map": "PID-3" - }, - { - "identity": "rim", - "map": "participation[typeCode=RTGT]" - }, - { - "identity": "w5", - "map": "FiveWs.subject" - } - ] - }, - { - "id": "Observation.focus", - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status", - "valueCode": "trial-use" - } - ], - "path": "Observation.focus", - "short": "What the observation is about, when it is not about the subject of record", - "definition": "The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.", - "comment": "Typically, an observation is made about the subject - a patient, or group of patients, location, or device - and the distinction between the subject and what is directly measured for an observation is specified in the observation code itself ( e.g., \"Blood Glucose\") and does not need to be represented separately using this element. Use `specimen` if a reference to a specimen is required. If a code is required instead of a resource use either `bodysite` for bodysites or the standard extension [focusCode](http://hl7.org/fhir/R4/extension-observation-focuscode.html).", - "min": 0, - "max": "*", - "base": { - "path": "Observation.focus", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Resource" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.subject[x]" - }, - { - "identity": "v2", - "map": "OBX-3" - }, - { - "identity": "rim", - "map": "participation[typeCode=SBJ]" - }, - { - "identity": "w5", - "map": "FiveWs.subject" - } - ] - }, - { - "id": "Observation.encounter", - "path": "Observation.encounter", - "short": "Healthcare event during which this observation is made", - "definition": "The healthcare event (e.g. a patient and healthcare provider interaction) during which this observation is made.", - "comment": "This will typically be the encounter the event occurred within, but some events may be initiated prior to or after the official completion of an encounter but still be tied to the context of the encounter (e.g. pre-admission laboratory tests).", - "requirements": "For some observations it may be important to know the link between an observation and a particular encounter.", - "alias": [ - "Context" - ], - "min": 0, - "max": "1", - "base": { - "path": "Observation.encounter", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Encounter" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.context" - }, - { - "identity": "w5", - "map": "FiveWs.context" - }, - { - "identity": "v2", - "map": "PV1" - }, - { - "identity": "rim", - "map": "inboundRelationship[typeCode=COMP].source[classCode=ENC, moodCode=EVN]" - } - ] - }, - { - "id": "Observation.effective[x]", - "path": "Observation.effective[x]", - "short": "Clinically relevant time/time-period for observation", - "definition": "The time or time-period the observed value is asserted as being true. For biological subjects - e.g. human patients - this is usually called the \"physiologically relevant time\". This is usually either the time of the procedure or of specimen collection, but very often the source of the date/time is not known, only the date/time itself.", - "comment": "At least a date should be present unless this observation is a historical report. For recording imprecise or \"fuzzy\" times (For example, a blood glucose measurement taken \"after breakfast\") use the [Timing](http://hl7.org/fhir/R4/datatypes.html#timing) datatype which allow the measurement to be tied to regular life events.", - "requirements": "Knowing when an observation was deemed true is important to its relevance as well as determining trends.", - "alias": [ - "Occurrence" - ], - "min": 0, - "max": "1", - "base": { - "path": "Observation.effective[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "dateTime" - }, - { - "code": "Period" - }, - { - "code": "Timing" - }, - { - "code": "instant" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.occurrence[x]" - }, - { - "identity": "w5", - "map": "FiveWs.done[x]" - }, - { - "identity": "v2", - "map": "OBX-14, and/or OBX-19 after v2.4 (depends on who observation made)" - }, - { - "identity": "rim", - "map": "effectiveTime" - } - ] - }, - { - "id": "Observation.issued", - "path": "Observation.issued", - "short": "Date/Time this version was made available", - "definition": "The date and time this version of the observation was made available to providers, typically after the results have been reviewed and verified.", - "comment": "For Observations that don’t require review and verification, it may be the same as the [`lastUpdated` ](http://hl7.org/fhir/R4/resource-definitions.html#Meta.lastUpdated) time of the resource itself. For Observations that do require review and verification for certain updates, it might not be the same as the `lastUpdated` time of the resource itself due to a non-clinically significant update that doesn’t require the new version to be reviewed and verified again.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.issued", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "instant" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.recorded" - }, - { - "identity": "v2", - "map": "OBR.22 (or MSH.7), or perhaps OBX-19 (depends on who observation made)" - }, - { - "identity": "rim", - "map": "participation[typeCode=AUT].time" - } - ] - }, - { - "id": "Observation.performer", - "path": "Observation.performer", - "short": "Who is responsible for the observation", - "definition": "Who was responsible for asserting the observed value as \"true\".", - "requirements": "May give a degree of confidence in the observation and also indicates where follow-up questions should be directed.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.performer", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Practitioner", - "http://hl7.org/fhir/StructureDefinition/PractitionerRole", - "http://hl7.org/fhir/StructureDefinition/Organization", - "http://hl7.org/fhir/StructureDefinition/CareTeam", - "http://hl7.org/fhir/StructureDefinition/Patient", - "http://hl7.org/fhir/StructureDefinition/RelatedPerson" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.performer.actor" - }, - { - "identity": "w5", - "map": "FiveWs.actor" - }, - { - "identity": "v2", - "map": "OBX.15 / (Practitioner) OBX-16, PRT-5:PRT-4='RO' / (Device) OBX-18 , PRT-10:PRT-4='EQUIP' / (Organization) OBX-23, PRT-8:PRT-4='PO'" - }, - { - "identity": "rim", - "map": "participation[typeCode=PRF]" - } - ] - }, - { - "id": "Observation.value[x]", - "path": "Observation.value[x]", - "slicing": { - "discriminator": [ - { - "type": "type", - "path": "$this" - } - ], - "ordered": false, - "rules": "closed" - }, - "short": "Actual result", - "definition": "The information determined as a result of making the observation, if the information has a simple value.", - "comment": "An observation may have; 1) a single value here, 2) both a value and a set of related or component values, or 3) only a set of related or component values. If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", - "requirements": "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.value[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "obs-7" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 441742003 |Evaluation finding|" - }, - { - "identity": "v2", - "map": "OBX.2, OBX.5, OBX.6" - }, - { - "identity": "rim", - "map": "value" - }, - { - "identity": "sct-attr", - "map": "363714003 |Interprets|" - } - ] - }, - { - "id": "Observation.value[x]:valueCodeableConcept", - "path": "Observation.value[x]", - "sliceName": "valueCodeableConcept", - "short": "Actual result", - "definition": "The information determined as a result of making the observation, if the information has a simple value.", - "comment": "An observation may have; 1) a single value here, 2) both a value and a set of related or component values, or 3) only a set of related or component values. If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", - "requirements": "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.value[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "obs-7" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "strength": "extensible", - "valueSet": "http://terminology.hl7.org/ValueSet/v3-FamilyMember" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 441742003 |Evaluation finding|" - }, - { - "identity": "v2", - "map": "OBX.2, OBX.5, OBX.6" - }, - { - "identity": "rim", - "map": "value" - }, - { - "identity": "sct-attr", - "map": "363714003 |Interprets|" - } - ] - }, - { - "id": "Observation.dataAbsentReason", - "path": "Observation.dataAbsentReason", - "short": "Why the result is missing", - "definition": "Provides a reason why the expected value in the element Observation.value[x] is missing.", - "comment": "Null or exceptional values can be represented two ways in FHIR Observations. One way is to simply include them in the value set and represent the exceptions in the value. For example, measurement values for a serology test could be \"detected\", \"not detected\", \"inconclusive\", or \"specimen unsatisfactory\". \n\nThe alternate way is to use the value element for actual observations and use the explicit dataAbsentReason element to record exceptional values. For example, the dataAbsentReason code \"error\" could be used when the measurement was not completed. Note that an observation may only be reported if there are values to report. For example differential cell counts values may be reported only when > 0. Because of these options, use-case agreements are required to interpret general observations for null or exceptional values.", - "requirements": "For many results it is necessary to handle exceptional values in measurements.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.dataAbsentReason", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "obs-6" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationValueAbsentReason" - } - ], - "strength": "extensible", - "description": "Codes specifying why the result (`Observation.value[x]`) is missing.", - "valueSet": "http://hl7.org/fhir/ValueSet/data-absent-reason" - }, - "mapping": [ - { - "identity": "v2", - "map": "N/A" - }, - { - "identity": "rim", - "map": "value.nullFlavor" - } - ] - }, - { - "id": "Observation.interpretation", - "path": "Observation.interpretation", - "short": "High, low, normal, etc.", - "definition": "A categorical assessment of an observation value. For example, high, low, normal.", - "comment": "Historically used for laboratory results (known as 'abnormal flag' ), its use extends to other use cases where coded interpretations are relevant. Often reported as one or more simple compact codes this element is often placed adjacent to the result value in reports and flow sheets to signal the meaning/normalcy status of the result.", - "requirements": "For some results, particularly numeric results, an interpretation is necessary to fully understand the significance of a result.", - "alias": [ - "Abnormal Flag" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation.interpretation", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationInterpretation" - } - ], - "strength": "extensible", - "description": "Codes identifying interpretations of observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-interpretation" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 260245000 |Findings values|" - }, - { - "identity": "v2", - "map": "OBX-8" - }, - { - "identity": "rim", - "map": "interpretationCode" - }, - { - "identity": "sct-attr", - "map": "363713009 |Has interpretation|" - } - ] - }, - { - "id": "Observation.note", - "path": "Observation.note", - "short": "Comments about the observation", - "definition": "Comments about the observation or the results.", - "comment": "May include general statements about the observation, or statements about significant, unexpected or unreliable results values, or information about its source when relevant to its interpretation.", - "requirements": "Need to be able to provide free text additional information.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.note", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Annotation" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "NTE.3 (partner NTE to OBX, or sometimes another (child?) OBX)" - }, - { - "identity": "rim", - "map": "subjectOf.observationEvent[code=\"annotation\"].value" - } - ] - }, - { - "id": "Observation.bodySite", - "path": "Observation.bodySite", - "short": "Observed body part", - "definition": "Indicates the site on the subject's body where the observation was made (i.e. the target site).", - "comment": "Only used if not implicit in code found in Observation.code. In many systems, this may be represented as a related observation instead of an inline component. \n\nIf the use case requires BodySite to be handled as a separate resource (e.g. to identify and track separately) then use the standard extension[ bodySite](http://hl7.org/fhir/R4/extension-bodysite.html).", - "min": 0, - "max": "1", - "base": { - "path": "Observation.bodySite", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "BodySite" - } - ], - "strength": "example", - "description": "Codes describing anatomical locations. May include laterality.", - "valueSet": "http://hl7.org/fhir/ValueSet/body-site" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 123037004 |Body structure|" - }, - { - "identity": "v2", - "map": "OBX-20" - }, - { - "identity": "rim", - "map": "targetSiteCode" - }, - { - "identity": "sct-attr", - "map": "718497002 |Inherent location|" - } - ] - }, - { - "id": "Observation.method", - "path": "Observation.method", - "short": "How it was done", - "definition": "Indicates the mechanism used to perform the observation.", - "comment": "Only used if not implicit in code for Observation.code.", - "requirements": "In some cases, method can impact results and is thus used for determining whether results can be compared or determining significance of results.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.method", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationMethod" - } - ], - "strength": "example", - "description": "Methods for simple observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-methods" - }, - "mapping": [ - { - "identity": "v2", - "map": "OBX-17" - }, - { - "identity": "rim", - "map": "methodCode" - } - ] - }, - { - "id": "Observation.specimen", - "path": "Observation.specimen", - "short": "Specimen used for this observation", - "definition": "The specimen that was used when this observation was made.", - "comment": "Should only be used if not implicit in code found in `Observation.code`. Observations are not made on specimens themselves; they are made on a subject, but in many cases by the means of a specimen. Note that although specimens are often involved, they are not always tracked and reported explicitly. Also note that observation resources may be used in contexts that track the specimen explicitly (e.g. Diagnostic Report).", - "min": 0, - "max": "1", - "base": { - "path": "Observation.specimen", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Specimen" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 123038009 |Specimen|" - }, - { - "identity": "v2", - "map": "SPM segment" - }, - { - "identity": "rim", - "map": "participation[typeCode=SPC].specimen" - }, - { - "identity": "sct-attr", - "map": "704319004 |Inherent in|" - } - ] - }, - { - "id": "Observation.device", - "path": "Observation.device", - "short": "(Measurement) Device", - "definition": "The device used to generate the observation data.", - "comment": "Note that this is not meant to represent a device involved in the transmission of the result, e.g., a gateway. Such devices may be documented using the Provenance resource where relevant.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.device", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Device", - "http://hl7.org/fhir/StructureDefinition/DeviceMetric" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 49062001 |Device|" - }, - { - "identity": "v2", - "map": "OBX-17 / PRT -10" - }, - { - "identity": "rim", - "map": "participation[typeCode=DEV]" - }, - { - "identity": "sct-attr", - "map": "424226004 |Using device|" - } - ] - }, - { - "id": "Observation.referenceRange", - "path": "Observation.referenceRange", - "short": "Provides guide for interpretation", - "definition": "Guidance on how to interpret the value by comparison to a normal or recommended range. Multiple reference ranges are interpreted as an \"OR\". In other words, to represent two distinct target populations, two `referenceRange` elements would be used.", - "comment": "Most observations only have one generic reference range. Systems MAY choose to restrict to only supplying the relevant reference range based on knowledge about the patient (e.g., specific to the patient's age, gender, weight and other factors), but this might not be possible or appropriate. Whenever more than one reference range is supplied, the differences between them SHOULD be provided in the reference range and/or age properties.", - "requirements": "Knowing what values are considered \"normal\" can help evaluate the significance of a particular result. Need to be able to provide multiple reference ranges for different contexts.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.referenceRange", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "obs-3", - "severity": "error", - "human": "Must have at least a low or a high or text", - "expression": "low.exists() or high.exists() or text.exists()", - "xpath": "(exists(f:low) or exists(f:high)or exists(f:text))", - "source": "http://hl7.org/fhir/StructureDefinition/Observation" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX.7" - }, - { - "identity": "rim", - "map": "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" - } - ] - }, - { - "id": "Observation.referenceRange.id", - "path": "Observation.referenceRange.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.referenceRange.extension", - "path": "Observation.referenceRange.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.referenceRange.modifierExtension", - "path": "Observation.referenceRange.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.referenceRange.low", - "path": "Observation.referenceRange.low", - "short": "Low Range, if relevant", - "definition": "The value of the low bound of the reference range. The low bound of the reference range endpoint is inclusive of the value (e.g. reference range is >=5 - <=9). If the low bound is omitted, it is assumed to be meaningless (e.g. reference range is <=2.3).", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.low", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Quantity", - "profile": [ - "http://hl7.org/fhir/StructureDefinition/SimpleQuantity" - ] - } - ], - "condition": [ - "obs-3" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX-7" - }, - { - "identity": "rim", - "map": "value:IVL_PQ.low" - } - ] - }, - { - "id": "Observation.referenceRange.high", - "path": "Observation.referenceRange.high", - "short": "High Range, if relevant", - "definition": "The value of the high bound of the reference range. The high bound of the reference range endpoint is inclusive of the value (e.g. reference range is >=5 - <=9). If the high bound is omitted, it is assumed to be meaningless (e.g. reference range is >= 2.3).", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.high", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Quantity", - "profile": [ - "http://hl7.org/fhir/StructureDefinition/SimpleQuantity" - ] - } - ], - "condition": [ - "obs-3" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX-7" - }, - { - "identity": "rim", - "map": "value:IVL_PQ.high" - } - ] - }, - { - "id": "Observation.referenceRange.type", - "path": "Observation.referenceRange.type", - "short": "Reference range qualifier", - "definition": "Codes to indicate the what part of the targeted reference population it applies to. For example, the normal or therapeutic range.", - "comment": "This SHOULD be populated if there is more than one range. If this element is not present then the normal range is assumed.", - "requirements": "Need to be able to say what kind of reference range this is - normal, recommended, therapeutic, etc., - for proper interpretation.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.type", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationRangeMeaning" - } - ], - "strength": "preferred", - "description": "Code for the meaning of a reference range.", - "valueSet": "http://hl7.org/fhir/ValueSet/referencerange-meaning" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 260245000 |Findings values| OR \r< 365860008 |General clinical state finding| \rOR \r< 250171008 |Clinical history or observation findings| OR \r< 415229000 |Racial group| OR \r< 365400002 |Finding of puberty stage| OR\r< 443938003 |Procedure carried out on subject|" - }, - { - "identity": "v2", - "map": "OBX-10" - }, - { - "identity": "rim", - "map": "interpretationCode" - } - ] - }, - { - "id": "Observation.referenceRange.appliesTo", - "path": "Observation.referenceRange.appliesTo", - "short": "Reference range population", - "definition": "Codes to indicate the target population this reference range applies to. For example, a reference range may be based on the normal population or a particular sex or race. Multiple `appliesTo` are interpreted as an \"AND\" of the target populations. For example, to represent a target population of African American females, both a code of female and a code for African American would be used.", - "comment": "This SHOULD be populated if there is more than one range. If this element is not present then the normal population is assumed.", - "requirements": "Need to be able to identify the target population for proper interpretation.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.referenceRange.appliesTo", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationRangeType" - } - ], - "strength": "example", - "description": "Codes identifying the population the reference range applies to.", - "valueSet": "http://hl7.org/fhir/ValueSet/referencerange-appliesto" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 260245000 |Findings values| OR \r< 365860008 |General clinical state finding| \rOR \r< 250171008 |Clinical history or observation findings| OR \r< 415229000 |Racial group| OR \r< 365400002 |Finding of puberty stage| OR\r< 443938003 |Procedure carried out on subject|" - }, - { - "identity": "v2", - "map": "OBX-10" - }, - { - "identity": "rim", - "map": "interpretationCode" - } - ] - }, - { - "id": "Observation.referenceRange.age", - "path": "Observation.referenceRange.age", - "short": "Applicable age range, if relevant", - "definition": "The age at which this reference range is applicable. This is a neonatal age (e.g. number of weeks at term) if the meaning says so.", - "requirements": "Some analytes vary greatly over age.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.age", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Range" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "outboundRelationship[typeCode=PRCN].targetObservationCriterion[code=\"age\"].value" - } - ] - }, - { - "id": "Observation.referenceRange.text", - "path": "Observation.referenceRange.text", - "short": "Text based reference range in an observation", - "definition": "Text based reference range in an observation which may be used when a quantitative range is not appropriate for an observation. An example would be a reference value of \"Negative\" or a list or table of \"normals\".", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX-7" - }, - { - "identity": "rim", - "map": "value:ST" - } - ] - }, - { - "id": "Observation.hasMember", - "path": "Observation.hasMember", - "short": "Related resource that belongs to the Observation group", - "definition": "This observation is a group observation (e.g. a battery, a panel of tests, a set of vital sign measurements) that includes the target as a member of the group.", - "comment": "When using this element, an observation will typically have either a value or a set of related resources, although both may be present in some cases. For a discussion on the ways Observations can assembled in groups together, see [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below. Note that a system may calculate results from [QuestionnaireResponse](http://hl7.org/fhir/R4/questionnaireresponse.html) into a final score and represent the score as an Observation.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.hasMember", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Observation", - "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse", - "http://hl7.org/fhir/StructureDefinition/MolecularSequence" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "Relationships established by OBX-4 usage" - }, - { - "identity": "rim", - "map": "outBoundRelationship" - } - ] - }, - { - "id": "Observation.derivedFrom", - "path": "Observation.derivedFrom", - "short": "Related measurements the observation is made from", - "definition": "The target resource that represents a measurement from which this observation value is derived. For example, a calculated anion gap or a fetal measurement based on an ultrasound image.", - "comment": "All the reference choices that are listed in this element can represent clinical observations and other measurements that may be the source for a derived value. The most common reference will be another Observation. For a discussion on the ways Observations can assembled in groups together, see [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.derivedFrom", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/DocumentReference", - "http://hl7.org/fhir/StructureDefinition/ImagingStudy", - "http://hl7.org/fhir/StructureDefinition/Media", - "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse", - "http://hl7.org/fhir/StructureDefinition/Observation", - "http://hl7.org/fhir/StructureDefinition/MolecularSequence" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "Relationships established by OBX-4 usage" - }, - { - "identity": "rim", - "map": ".targetObservation" - } - ] - }, - { - "id": "Observation.component", - "path": "Observation.component", - "short": "Component results", - "definition": "Some observations have multiple component observations. These component observations are expressed as separate code value pairs that share the same attributes. Examples include systolic and diastolic component observations for blood pressure measurement and multiple component observations for genetics observations.", - "comment": "For a discussion on the ways Observations can be assembled in groups together see [Notes](http://hl7.org/fhir/R4/observation.html#notes) below.", - "requirements": "Component observations share the same attributes in the Observation resource as the primary observation and are always treated a part of a single observation (they are not separable). However, the reference range for the primary observation value is not inherited by the component values and is required when appropriate for each component observation.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.component", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "containment by OBX-4?" - }, - { - "identity": "rim", - "map": "outBoundRelationship[typeCode=COMP]" - } - ] - }, - { - "id": "Observation.component.id", - "path": "Observation.component.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.component.extension", - "path": "Observation.component.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.component.modifierExtension", - "path": "Observation.component.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.component.code", - "path": "Observation.component.code", - "short": "Type of component observation (code / type)", - "definition": "Describes what was observed. Sometimes this is called the observation \"code\".", - "comment": "*All* code-value and component.code-component.value pairs need to be taken into account to correctly understand the meaning of the observation.", - "requirements": "Knowing what kind of observation is being made is essential to understanding the observation.", - "min": 1, - "max": "1", - "base": { - "path": "Observation.component.code", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationCode" - } - ], - "strength": "example", - "description": "Codes identifying names of simple observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-codes" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.what[x]" - }, - { - "identity": "sct-concept", - "map": "< 363787002 |Observable entity| OR \r< 386053000 |Evaluation procedure|" - }, - { - "identity": "v2", - "map": "OBX-3" - }, - { - "identity": "rim", - "map": "code" - } - ] - }, - { - "id": "Observation.component.value[x]", - "path": "Observation.component.value[x]", - "short": "Actual component result", - "definition": "The information determined as a result of making the observation, if the information has a simple value.", - "comment": "Used when observation has a set of component observations. An observation may have both a value (e.g. an Apgar score) and component observations (the observations from which the Apgar score was derived). If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", - "requirements": "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.component.value[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Quantity" - }, - { - "code": "CodeableConcept" - }, - { - "code": "string" - }, - { - "code": "boolean" - }, - { - "code": "integer" - }, - { - "code": "Range" - }, - { - "code": "Ratio" - }, - { - "code": "SampledData" - }, - { - "code": "time" - }, - { - "code": "dateTime" - }, - { - "code": "Period" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "sct-concept", - "map": "363714003 |Interprets| < 441742003 |Evaluation finding|" - }, - { - "identity": "v2", - "map": "OBX.2, OBX.5, OBX.6" - }, - { - "identity": "rim", - "map": "value" - }, - { - "identity": "sct-attr", - "map": "363714003 |Interprets|" - } - ] - }, - { - "id": "Observation.component.dataAbsentReason", - "path": "Observation.component.dataAbsentReason", - "short": "Why the component result is missing", - "definition": "Provides a reason why the expected value in the element Observation.component.value[x] is missing.", - "comment": "\"Null\" or exceptional values can be represented two ways in FHIR Observations. One way is to simply include them in the value set and represent the exceptions in the value. For example, measurement values for a serology test could be \"detected\", \"not detected\", \"inconclusive\", or \"test not done\". \n\nThe alternate way is to use the value element for actual observations and use the explicit dataAbsentReason element to record exceptional values. For example, the dataAbsentReason code \"error\" could be used when the measurement was not completed. Because of these options, use-case agreements are required to interpret general observations for exceptional values.", - "requirements": "For many results it is necessary to handle exceptional values in measurements.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.component.dataAbsentReason", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "obs-6" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationValueAbsentReason" - } - ], - "strength": "extensible", - "description": "Codes specifying why the result (`Observation.value[x]`) is missing.", - "valueSet": "http://hl7.org/fhir/ValueSet/data-absent-reason" - }, - "mapping": [ - { - "identity": "v2", - "map": "N/A" - }, - { - "identity": "rim", - "map": "value.nullFlavor" - } - ] - }, - { - "id": "Observation.component.interpretation", - "path": "Observation.component.interpretation", - "short": "High, low, normal, etc.", - "definition": "A categorical assessment of an observation value. For example, high, low, normal.", - "comment": "Historically used for laboratory results (known as 'abnormal flag' ), its use extends to other use cases where coded interpretations are relevant. Often reported as one or more simple compact codes this element is often placed adjacent to the result value in reports and flow sheets to signal the meaning/normalcy status of the result.", - "requirements": "For some results, particularly numeric results, an interpretation is necessary to fully understand the significance of a result.", - "alias": [ - "Abnormal Flag" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation.component.interpretation", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationInterpretation" - } - ], - "strength": "extensible", - "description": "Codes identifying interpretations of observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-interpretation" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 260245000 |Findings values|" - }, - { - "identity": "v2", - "map": "OBX-8" - }, - { - "identity": "rim", - "map": "interpretationCode" - }, - { - "identity": "sct-attr", - "map": "363713009 |Has interpretation|" - } - ] - }, - { - "id": "Observation.component.referenceRange", - "path": "Observation.component.referenceRange", - "short": "Provides guide for interpretation of component result", - "definition": "Guidance on how to interpret the value by comparison to a normal or recommended range.", - "comment": "Most observations only have one generic reference range. Systems MAY choose to restrict to only supplying the relevant reference range based on knowledge about the patient (e.g., specific to the patient's age, gender, weight and other factors), but this might not be possible or appropriate. Whenever more than one reference range is supplied, the differences between them SHOULD be provided in the reference range and/or age properties.", - "requirements": "Knowing what values are considered \"normal\" can help evaluate the significance of a particular result. Need to be able to provide multiple reference ranges for different contexts.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.component.referenceRange", - "min": 0, - "max": "*" - }, - "contentReference": "http://hl7.org/fhir/StructureDefinition/Observation#Observation.referenceRange", - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX.7" - }, - { - "identity": "rim", - "map": "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" - } - ] - } - ] - }, - "differential": { - "element": [ - { - "id": "Observation", - "path": "Observation" - }, - { - "id": "Observation.code", - "path": "Observation.code", - "patternCodeableConcept": { - "coding": [ - { - "system": "http://terminology.hl7.org/CodeSystem/v3-RoleCode", - "code": "FAMMEMB", - "display": "family member" - } - ] - } - }, - { - "id": "Observation.code.text", - "path": "Observation.code.text", - "patternString": "Family Relationship" - }, - { - "id": "Observation.value[x]", - "path": "Observation.value[x]", - "slicing": { - "discriminator": [ - { - "type": "type", - "path": "$this" - } - ], - "ordered": false, - "rules": "open" - }, - "type": [ - { - "code": "CodeableConcept" - } - ] - }, - { - "id": "Observation.valueCodeableConcept", - "path": "Observation.valueCodeableConcept", - "min": 0, - "max": "1", - "binding": { - "strength": "extensible", - "valueSet": "http://terminology.hl7.org/ValueSet/v3-FamilyMember" - } - } - ] - } +{ + "resourceType" : "StructureDefinition", + "id" : "family-relationship", + "text" : { + "status" : "extensions", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-family-relationship-definitions.html#Observation\">Observation</a><a name=\"Observation\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observation.html\">Observation</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Measurements and simple assertions</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-family-relationship-definitions.html#Observation.code\">code</a><a name=\"Observation.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Type of observation (code / type)</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck111.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#CodeableConcept.coding\">coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..*</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Code defined by a terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">(complex)</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1110.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">http://terminology.hl7.org/CodeSystem/v3-RoleCode</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1110.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">FAMMEMB</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1100.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">family member</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck100.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-family-relationship-definitions.html#Observation.code.text\">text</a><a name=\"Observation.code.text\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Plain text representation of the concept</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">Family Relationship</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck12.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_slice.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Slice Definition\" class=\"hierarchy\"/> <a style=\"font-style: italic\" href=\"StructureDefinition-family-relationship-definitions.html#Observation.value[x]\">value[x]</a><a name=\"Observation.value_x_\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"font-style: italic\"/><span style=\"opacity: 0.5; font-style: italic\">0</span><span style=\"opacity: 0.5; font-style: italic\">..</span><span style=\"opacity: 0.5; font-style: italic\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"font-style: italic\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5; font-style: italic\">Actual result</span><br style=\"font-style: italic\"/><span style=\"font-weight:bold; font-style: italic\">Slice: </span><span style=\"font-style: italic\">Unordered, Open by type:$this</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-family-relationship-definitions.html#Observation.valueCodeableConcept\">valueCodeableConcept</a><a name=\"Observation.valueCodeableConcept\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">0..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Actual result</span><br/><span style=\"font-weight:bold\">Binding: </span><a href=\"http://terminology.hl7.org/5.0.0/ValueSet-v3-FamilyMember.html\">FamilyMember</a> (<a href=\"http://hl7.org/fhir/R4/terminologies.html#extensible\" title=\"To be conformant, the concept in this element SHALL be from the specified value set if any of the codes within the value set can apply to the concept being communicated. If the value set does not cover the concept (based on human review), alternate codings (or, data type allowing, text) may be included instead.\">extensible</a>)</td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" + }, + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", + "valueString" : "Clinical.Diagnostics" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", + "valueCode" : "patient" + }], + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship", + "version" : "0.2.0", + "name" : "FamilyRelationship", + "title" : "NCPI Family Relationship", + "status" : "draft", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "Representation of a family relationship.", + "fhirVersion" : "4.0.1", + "mapping" : [{ + "identity" : "workflow", + "uri" : "http://hl7.org/fhir/workflow", + "name" : "Workflow Pattern" + }, + { + "identity" : "sct-concept", + "uri" : "http://snomed.info/conceptdomain", + "name" : "SNOMED CT Concept Domain Binding" + }, + { + "identity" : "v2", + "uri" : "http://hl7.org/v2", + "name" : "HL7 v2 Mapping" + }, + { + "identity" : "rim", + "uri" : "http://hl7.org/v3", + "name" : "RIM Mapping" + }, + { + "identity" : "w5", + "uri" : "http://hl7.org/fhir/fivews", + "name" : "FiveWs Pattern Mapping" + }, + { + "identity" : "sct-attr", + "uri" : "http://snomed.org/attributebinding", + "name" : "SNOMED CT Attribute Binding" + }], + "kind" : "resource", + "abstract" : false, + "type" : "Observation", + "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/Observation", + "derivation" : "constraint", + "snapshot" : { + "element" : [{ + "id" : "Observation", + "path" : "Observation", + "short" : "Measurements and simple assertions", + "definition" : "Measurements and simple assertions made about a patient, device or other subject.", + "comment" : "Used for simple observations such as device measurements, laboratory atomic results, vital signs, height, weight, smoking status, comments, etc. Other resources are used to provide context for observations such as laboratory reports, etc.", + "alias" : ["Vital Signs", + "Measurement", + "Results", + "Tests"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation", + "min" : 0, + "max" : "*" + }, + "constraint" : [{ + "key" : "dom-2", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL NOT contain nested Resources", + "expression" : "contained.contained.empty()", + "xpath" : "not(parent::f:contained and f:contained)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-3", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", + "expression" : "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", + "xpath" : "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-4", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", + "expression" : "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-5", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a security label", + "expression" : "contained.meta.security.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:security))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", + "valueBoolean" : true + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", + "valueMarkdown" : "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." + }], + "key" : "dom-6", + "severity" : "warning", + "human" : "A resource should have narrative for robust management", + "expression" : "text.`div`.exists()", + "xpath" : "exists(f:text/h:div)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "obs-6", + "severity" : "error", + "human" : "dataAbsentReason SHALL only be present if Observation.value[x] is not present", + "expression" : "dataAbsentReason.empty() or value.empty()", + "xpath" : "not(exists(f:dataAbsentReason)) or (not(exists(*[starts-with(local-name(.), 'value')])))", + "source" : "http://hl7.org/fhir/StructureDefinition/Observation" + }, + { + "key" : "obs-7", + "severity" : "error", + "human" : "If Observation.code is the same as an Observation.component.code then the value element associated with the code SHALL NOT be present", + "expression" : "value.empty() or component.code.where(coding.intersect(%resource.code.coding).exists()).empty()", + "xpath" : "not(f:*[starts-with(local-name(.), 'value')] and (for $coding in f:code/f:coding return f:component/f:code/f:coding[f:code/@value=$coding/f:code/@value] [f:system/@value=$coding/f:system/@value]))", + "source" : "http://hl7.org/fhir/StructureDefinition/Observation" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Entity. Role, or Act" + }, + { + "identity" : "workflow", + "map" : "Event" + }, + { + "identity" : "sct-concept", + "map" : "< 363787002 |Observable entity|" + }, + { + "identity" : "v2", + "map" : "OBX" + }, + { + "identity" : "rim", + "map" : "Observation[classCode=OBS, moodCode=EVN]" + }] + }, + { + "id" : "Observation.id", + "path" : "Observation.id", + "short" : "Logical id of this artifact", + "definition" : "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", + "comment" : "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "id" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "Observation.meta", + "path" : "Observation.meta", + "short" : "Metadata about the resource", + "definition" : "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.meta", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Meta" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "Observation.implicitRules", + "path" : "Observation.implicitRules", + "short" : "A set of rules under which this content was created", + "definition" : "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", + "comment" : "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.implicitRules", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", + "isSummary" : true + }, + { + "id" : "Observation.language", + "path" : "Observation.language", + "short" : "Language of the resource content", + "definition" : "The base language in which the resource is written.", + "comment" : "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.language", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", + "valueCanonical" : "http://hl7.org/fhir/ValueSet/all-languages" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "Language" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "preferred", + "description" : "A human language.", + "valueSet" : "http://hl7.org/fhir/ValueSet/languages" + } + }, + { + "id" : "Observation.text", + "path" : "Observation.text", + "short" : "Text summary of the resource, for human interpretation", + "definition" : "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", + "comment" : "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", + "alias" : ["narrative", + "html", + "xhtml", + "display"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "DomainResource.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Narrative" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Act.text?" + }] + }, + { + "id" : "Observation.contained", + "path" : "Observation.contained", + "short" : "Contained, inline Resources", + "definition" : "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", + "comment" : "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", + "alias" : ["inline resources", + "anonymous resources", + "contained resources"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.contained", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Resource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.extension", + "path" : "Observation.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.modifierExtension", + "path" : "Observation.modifierExtension", + "short" : "Extensions that cannot be ignored", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.identifier", + "path" : "Observation.identifier", + "short" : "Business Identifier for observation", + "definition" : "A unique identifier assigned to this observation.", + "requirements" : "Allows observations to be distinguished and referenced.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.identifier", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Identifier" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.identifier" + }, + { + "identity" : "w5", + "map" : "FiveWs.identifier" + }, + { + "identity" : "v2", + "map" : "OBX.21 For OBX segments from systems without OBX-21 support a combination of ORC/OBR and OBX must be negotiated between trading partners to uniquely identify the OBX segment. Depending on how V2 has been implemented each of these may be an option: 1) OBR-3 + OBX-3 + OBX-4 or 2) OBR-3 + OBR-4 + OBX-3 + OBX-4 or 2) some other way to uniquely ID the OBR/ORC + OBX-3 + OBX-4." + }, + { + "identity" : "rim", + "map" : "id" + }] + }, + { + "id" : "Observation.basedOn", + "path" : "Observation.basedOn", + "short" : "Fulfills plan, proposal or order", + "definition" : "A plan, proposal or order that is fulfilled in whole or in part by this event. For example, a MedicationRequest may require a patient to have laboratory test performed before it is dispensed.", + "requirements" : "Allows tracing of authorization for the event and tracking whether proposals/recommendations were acted upon.", + "alias" : ["Fulfills"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.basedOn", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/CarePlan", + "http://hl7.org/fhir/StructureDefinition/DeviceRequest", + "http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation", + "http://hl7.org/fhir/StructureDefinition/MedicationRequest", + "http://hl7.org/fhir/StructureDefinition/NutritionOrder", + "http://hl7.org/fhir/StructureDefinition/ServiceRequest"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.basedOn" + }, + { + "identity" : "v2", + "map" : "ORC" + }, + { + "identity" : "rim", + "map" : ".inboundRelationship[typeCode=COMP].source[moodCode=EVN]" + }] + }, + { + "id" : "Observation.partOf", + "path" : "Observation.partOf", + "short" : "Part of referenced event", + "definition" : "A larger event of which this particular Observation is a component or step. For example, an observation as part of a procedure.", + "comment" : "To link an Observation to an Encounter use `encounter`. See the [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below for guidance on referencing another Observation.", + "alias" : ["Container"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.partOf", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/MedicationAdministration", + "http://hl7.org/fhir/StructureDefinition/MedicationDispense", + "http://hl7.org/fhir/StructureDefinition/MedicationStatement", + "http://hl7.org/fhir/StructureDefinition/Procedure", + "http://hl7.org/fhir/StructureDefinition/Immunization", + "http://hl7.org/fhir/StructureDefinition/ImagingStudy"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.partOf" + }, + { + "identity" : "v2", + "map" : "Varies by domain" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=FLFS].target" + }] + }, + { + "id" : "Observation.status", + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-display-hint", + "valueString" : "default: final" + }], + "path" : "Observation.status", + "short" : "registered | preliminary | final | amended +", + "definition" : "The status of the result value.", + "comment" : "This element is labeled as a modifier because the status contains codes that mark the resource as not currently valid.", + "requirements" : "Need to track the status of individual results. Some results are finalized before the whole report is finalized.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Observation.status", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid", + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationStatus" + }], + "strength" : "required", + "description" : "Codes providing the status of an observation.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-status|4.0.1" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.status" + }, + { + "identity" : "w5", + "map" : "FiveWs.status" + }, + { + "identity" : "sct-concept", + "map" : "< 445584004 |Report by finality status|" + }, + { + "identity" : "v2", + "map" : "OBX-11" + }, + { + "identity" : "rim", + "map" : "status Amended & Final are differentiated by whether it is the subject of a ControlAct event with a type of \"revise\"" + }] + }, + { + "id" : "Observation.category", + "path" : "Observation.category", + "short" : "Classification of type of observation", + "definition" : "A code that classifies the general type of observation being made.", + "comment" : "In addition to the required category valueset, this element allows various categorization schemes based on the owner’s definition of the category and effectively multiple categories can be used at once. The level of granularity is defined by the category concepts in the value set.", + "requirements" : "Used for filtering what observations are retrieved and displayed.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.category", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationCategory" + }], + "strength" : "preferred", + "description" : "Codes for high level observation categories.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-category" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.class" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=\"COMP].target[classCode=\"LIST\", moodCode=\"EVN\"].code" + }] + }, + { + "id" : "Observation.code", + "path" : "Observation.code", + "short" : "Type of observation (code / type)", + "definition" : "Describes what was observed. Sometimes this is called the observation \"name\".", + "comment" : "*All* code-value and, if present, component.code-component.value pairs need to be taken into account to correctly understand the meaning of the observation.", + "requirements" : "Knowing what kind of observation is being made is essential to understanding the observation.", + "alias" : ["Name"], + "min" : 1, + "max" : "1", + "base" : { + "path" : "Observation.code", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "patternCodeableConcept" : { + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/v3-RoleCode", + "code" : "FAMMEMB", + "display" : "family member" + }] + }, + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationCode" + }], + "strength" : "example", + "description" : "Codes identifying names of simple observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-codes" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.code" + }, + { + "identity" : "w5", + "map" : "FiveWs.what[x]" + }, + { + "identity" : "sct-concept", + "map" : "< 363787002 |Observable entity| OR < 386053000 |Evaluation procedure|" + }, + { + "identity" : "v2", + "map" : "OBX-3" + }, + { + "identity" : "rim", + "map" : "code" + }, + { + "identity" : "sct-attr", + "map" : "116680003 |Is a|" + }] + }, + { + "id" : "Observation.code.id", + "path" : "Observation.code.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.code.extension", + "path" : "Observation.code.extension", + "slicing" : { + "discriminator" : [{ + "type" : "value", + "path" : "url" + }], + "description" : "Extensions are always sliced by (at least) url", + "rules" : "open" + }, + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.code.coding", + "path" : "Observation.code.coding", + "short" : "Code defined by a terminology system", + "definition" : "A reference to a code defined by a terminology system.", + "comment" : "Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.", + "requirements" : "Allows for alternative encodings within a code system, and translations to other code systems.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "CodeableConcept.coding", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Coding" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "C*E.1-8, C*E.10-22" + }, + { + "identity" : "rim", + "map" : "union(., ./translation)" + }, + { + "identity" : "orim", + "map" : "fhir:CodeableConcept.coding rdfs:subPropertyOf dt:CD.coding" + }] + }, + { + "id" : "Observation.code.text", + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable", + "valueBoolean" : true + }], + "path" : "Observation.code.text", + "short" : "Plain text representation of the concept", + "definition" : "A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user.", + "comment" : "Very often the text is the same as a displayName of one of the codings.", + "requirements" : "The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "CodeableConcept.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "patternString" : "Family Relationship", + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "C*E.9. But note many systems use C*E.2 for this" + }, + { + "identity" : "rim", + "map" : "./originalText[mediaType/code=\"text/plain\"]/data" + }, + { + "identity" : "orim", + "map" : "fhir:CodeableConcept.text rdfs:subPropertyOf dt:CD.originalText" + }] + }, + { + "id" : "Observation.subject", + "path" : "Observation.subject", + "short" : "Who and/or what the observation is about", + "definition" : "The patient, or group of patients, location, or device this observation is about and into whose record the observation is placed. If the actual focus of the observation is different from the subject (or a sample of, part, or region of the subject), the `focus` element or the `code` itself specifies the actual focus of the observation.", + "comment" : "One would expect this element to be a cardinality of 1..1. The only circumstance in which the subject can be missing is when the observation is made by a device that does not know the patient. In this case, the observation SHALL be matched to a patient through some context/channel matching technique, and at this point, the observation should be updated.", + "requirements" : "Observations have no value if you don't know who or what they're about.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.subject", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Patient", + "http://hl7.org/fhir/StructureDefinition/Group", + "http://hl7.org/fhir/StructureDefinition/Device", + "http://hl7.org/fhir/StructureDefinition/Location"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.subject" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject[x]" + }, + { + "identity" : "v2", + "map" : "PID-3" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=RTGT]" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject" + }] + }, + { + "id" : "Observation.focus", + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status", + "valueCode" : "trial-use" + }], + "path" : "Observation.focus", + "short" : "What the observation is about, when it is not about the subject of record", + "definition" : "The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.", + "comment" : "Typically, an observation is made about the subject - a patient, or group of patients, location, or device - and the distinction between the subject and what is directly measured for an observation is specified in the observation code itself ( e.g., \"Blood Glucose\") and does not need to be represented separately using this element. Use `specimen` if a reference to a specimen is required. If a code is required instead of a resource use either `bodysite` for bodysites or the standard extension [focusCode](http://hl7.org/fhir/R4/extension-observation-focuscode.html).", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.focus", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Resource"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.subject[x]" + }, + { + "identity" : "v2", + "map" : "OBX-3" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=SBJ]" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject" + }] + }, + { + "id" : "Observation.encounter", + "path" : "Observation.encounter", + "short" : "Healthcare event during which this observation is made", + "definition" : "The healthcare event (e.g. a patient and healthcare provider interaction) during which this observation is made.", + "comment" : "This will typically be the encounter the event occurred within, but some events may be initiated prior to or after the official completion of an encounter but still be tied to the context of the encounter (e.g. pre-admission laboratory tests).", + "requirements" : "For some observations it may be important to know the link between an observation and a particular encounter.", + "alias" : ["Context"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.encounter", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Encounter"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.context" + }, + { + "identity" : "w5", + "map" : "FiveWs.context" + }, + { + "identity" : "v2", + "map" : "PV1" + }, + { + "identity" : "rim", + "map" : "inboundRelationship[typeCode=COMP].source[classCode=ENC, moodCode=EVN]" + }] + }, + { + "id" : "Observation.effective[x]", + "path" : "Observation.effective[x]", + "short" : "Clinically relevant time/time-period for observation", + "definition" : "The time or time-period the observed value is asserted as being true. For biological subjects - e.g. human patients - this is usually called the \"physiologically relevant time\". This is usually either the time of the procedure or of specimen collection, but very often the source of the date/time is not known, only the date/time itself.", + "comment" : "At least a date should be present unless this observation is a historical report. For recording imprecise or \"fuzzy\" times (For example, a blood glucose measurement taken \"after breakfast\") use the [Timing](http://hl7.org/fhir/R4/datatypes.html#timing) datatype which allow the measurement to be tied to regular life events.", + "requirements" : "Knowing when an observation was deemed true is important to its relevance as well as determining trends.", + "alias" : ["Occurrence"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.effective[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "dateTime" + }, + { + "code" : "Period" + }, + { + "code" : "Timing" + }, + { + "code" : "instant" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.occurrence[x]" + }, + { + "identity" : "w5", + "map" : "FiveWs.done[x]" + }, + { + "identity" : "v2", + "map" : "OBX-14, and/or OBX-19 after v2.4 (depends on who observation made)" + }, + { + "identity" : "rim", + "map" : "effectiveTime" + }] + }, + { + "id" : "Observation.issued", + "path" : "Observation.issued", + "short" : "Date/Time this version was made available", + "definition" : "The date and time this version of the observation was made available to providers, typically after the results have been reviewed and verified.", + "comment" : "For Observations that don’t require review and verification, it may be the same as the [`lastUpdated` ](http://hl7.org/fhir/R4/resource-definitions.html#Meta.lastUpdated) time of the resource itself. For Observations that do require review and verification for certain updates, it might not be the same as the `lastUpdated` time of the resource itself due to a non-clinically significant update that doesn’t require the new version to be reviewed and verified again.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.issued", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "instant" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.recorded" + }, + { + "identity" : "v2", + "map" : "OBR.22 (or MSH.7), or perhaps OBX-19 (depends on who observation made)" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=AUT].time" + }] + }, + { + "id" : "Observation.performer", + "path" : "Observation.performer", + "short" : "Who is responsible for the observation", + "definition" : "Who was responsible for asserting the observed value as \"true\".", + "requirements" : "May give a degree of confidence in the observation and also indicates where follow-up questions should be directed.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.performer", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Practitioner", + "http://hl7.org/fhir/StructureDefinition/PractitionerRole", + "http://hl7.org/fhir/StructureDefinition/Organization", + "http://hl7.org/fhir/StructureDefinition/CareTeam", + "http://hl7.org/fhir/StructureDefinition/Patient", + "http://hl7.org/fhir/StructureDefinition/RelatedPerson"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.performer.actor" + }, + { + "identity" : "w5", + "map" : "FiveWs.actor" + }, + { + "identity" : "v2", + "map" : "OBX.15 / (Practitioner) OBX-16, PRT-5:PRT-4='RO' / (Device) OBX-18 , PRT-10:PRT-4='EQUIP' / (Organization) OBX-23, PRT-8:PRT-4='PO'" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=PRF]" + }] + }, + { + "id" : "Observation.value[x]", + "path" : "Observation.value[x]", + "slicing" : { + "discriminator" : [{ + "type" : "type", + "path" : "$this" + }], + "ordered" : false, + "rules" : "closed" + }, + "short" : "Actual result", + "definition" : "The information determined as a result of making the observation, if the information has a simple value.", + "comment" : "An observation may have; 1) a single value here, 2) both a value and a set of related or component values, or 3) only a set of related or component values. If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", + "requirements" : "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.value[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["obs-7"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 441742003 |Evaluation finding|" + }, + { + "identity" : "v2", + "map" : "OBX.2, OBX.5, OBX.6" + }, + { + "identity" : "rim", + "map" : "value" + }, + { + "identity" : "sct-attr", + "map" : "363714003 |Interprets|" + }] + }, + { + "id" : "Observation.value[x]:valueCodeableConcept", + "path" : "Observation.value[x]", + "sliceName" : "valueCodeableConcept", + "short" : "Actual result", + "definition" : "The information determined as a result of making the observation, if the information has a simple value.", + "comment" : "An observation may have; 1) a single value here, 2) both a value and a set of related or component values, or 3) only a set of related or component values. If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", + "requirements" : "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.value[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["obs-7"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "strength" : "extensible", + "valueSet" : "http://terminology.hl7.org/ValueSet/v3-FamilyMember" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 441742003 |Evaluation finding|" + }, + { + "identity" : "v2", + "map" : "OBX.2, OBX.5, OBX.6" + }, + { + "identity" : "rim", + "map" : "value" + }, + { + "identity" : "sct-attr", + "map" : "363714003 |Interprets|" + }] + }, + { + "id" : "Observation.dataAbsentReason", + "path" : "Observation.dataAbsentReason", + "short" : "Why the result is missing", + "definition" : "Provides a reason why the expected value in the element Observation.value[x] is missing.", + "comment" : "Null or exceptional values can be represented two ways in FHIR Observations. One way is to simply include them in the value set and represent the exceptions in the value. For example, measurement values for a serology test could be \"detected\", \"not detected\", \"inconclusive\", or \"specimen unsatisfactory\". \n\nThe alternate way is to use the value element for actual observations and use the explicit dataAbsentReason element to record exceptional values. For example, the dataAbsentReason code \"error\" could be used when the measurement was not completed. Note that an observation may only be reported if there are values to report. For example differential cell counts values may be reported only when > 0. Because of these options, use-case agreements are required to interpret general observations for null or exceptional values.", + "requirements" : "For many results it is necessary to handle exceptional values in measurements.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.dataAbsentReason", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["obs-6"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationValueAbsentReason" + }], + "strength" : "extensible", + "description" : "Codes specifying why the result (`Observation.value[x]`) is missing.", + "valueSet" : "http://hl7.org/fhir/ValueSet/data-absent-reason" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "N/A" + }, + { + "identity" : "rim", + "map" : "value.nullFlavor" + }] + }, + { + "id" : "Observation.interpretation", + "path" : "Observation.interpretation", + "short" : "High, low, normal, etc.", + "definition" : "A categorical assessment of an observation value. For example, high, low, normal.", + "comment" : "Historically used for laboratory results (known as 'abnormal flag' ), its use extends to other use cases where coded interpretations are relevant. Often reported as one or more simple compact codes this element is often placed adjacent to the result value in reports and flow sheets to signal the meaning/normalcy status of the result.", + "requirements" : "For some results, particularly numeric results, an interpretation is necessary to fully understand the significance of a result.", + "alias" : ["Abnormal Flag"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.interpretation", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationInterpretation" + }], + "strength" : "extensible", + "description" : "Codes identifying interpretations of observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-interpretation" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 260245000 |Findings values|" + }, + { + "identity" : "v2", + "map" : "OBX-8" + }, + { + "identity" : "rim", + "map" : "interpretationCode" + }, + { + "identity" : "sct-attr", + "map" : "363713009 |Has interpretation|" + }] + }, + { + "id" : "Observation.note", + "path" : "Observation.note", + "short" : "Comments about the observation", + "definition" : "Comments about the observation or the results.", + "comment" : "May include general statements about the observation, or statements about significant, unexpected or unreliable results values, or information about its source when relevant to its interpretation.", + "requirements" : "Need to be able to provide free text additional information.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.note", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Annotation" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "NTE.3 (partner NTE to OBX, or sometimes another (child?) OBX)" + }, + { + "identity" : "rim", + "map" : "subjectOf.observationEvent[code=\"annotation\"].value" + }] + }, + { + "id" : "Observation.bodySite", + "path" : "Observation.bodySite", + "short" : "Observed body part", + "definition" : "Indicates the site on the subject's body where the observation was made (i.e. the target site).", + "comment" : "Only used if not implicit in code found in Observation.code. In many systems, this may be represented as a related observation instead of an inline component. \n\nIf the use case requires BodySite to be handled as a separate resource (e.g. to identify and track separately) then use the standard extension[ bodySite](http://hl7.org/fhir/R4/extension-bodysite.html).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.bodySite", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "BodySite" + }], + "strength" : "example", + "description" : "Codes describing anatomical locations. May include laterality.", + "valueSet" : "http://hl7.org/fhir/ValueSet/body-site" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 123037004 |Body structure|" + }, + { + "identity" : "v2", + "map" : "OBX-20" + }, + { + "identity" : "rim", + "map" : "targetSiteCode" + }, + { + "identity" : "sct-attr", + "map" : "718497002 |Inherent location|" + }] + }, + { + "id" : "Observation.method", + "path" : "Observation.method", + "short" : "How it was done", + "definition" : "Indicates the mechanism used to perform the observation.", + "comment" : "Only used if not implicit in code for Observation.code.", + "requirements" : "In some cases, method can impact results and is thus used for determining whether results can be compared or determining significance of results.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.method", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationMethod" + }], + "strength" : "example", + "description" : "Methods for simple observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-methods" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX-17" + }, + { + "identity" : "rim", + "map" : "methodCode" + }] + }, + { + "id" : "Observation.specimen", + "path" : "Observation.specimen", + "short" : "Specimen used for this observation", + "definition" : "The specimen that was used when this observation was made.", + "comment" : "Should only be used if not implicit in code found in `Observation.code`. Observations are not made on specimens themselves; they are made on a subject, but in many cases by the means of a specimen. Note that although specimens are often involved, they are not always tracked and reported explicitly. Also note that observation resources may be used in contexts that track the specimen explicitly (e.g. Diagnostic Report).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.specimen", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Specimen"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 123038009 |Specimen|" + }, + { + "identity" : "v2", + "map" : "SPM segment" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=SPC].specimen" + }, + { + "identity" : "sct-attr", + "map" : "704319004 |Inherent in|" + }] + }, + { + "id" : "Observation.device", + "path" : "Observation.device", + "short" : "(Measurement) Device", + "definition" : "The device used to generate the observation data.", + "comment" : "Note that this is not meant to represent a device involved in the transmission of the result, e.g., a gateway. Such devices may be documented using the Provenance resource where relevant.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.device", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Device", + "http://hl7.org/fhir/StructureDefinition/DeviceMetric"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 49062001 |Device|" + }, + { + "identity" : "v2", + "map" : "OBX-17 / PRT -10" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=DEV]" + }, + { + "identity" : "sct-attr", + "map" : "424226004 |Using device|" + }] + }, + { + "id" : "Observation.referenceRange", + "path" : "Observation.referenceRange", + "short" : "Provides guide for interpretation", + "definition" : "Guidance on how to interpret the value by comparison to a normal or recommended range. Multiple reference ranges are interpreted as an \"OR\". In other words, to represent two distinct target populations, two `referenceRange` elements would be used.", + "comment" : "Most observations only have one generic reference range. Systems MAY choose to restrict to only supplying the relevant reference range based on knowledge about the patient (e.g., specific to the patient's age, gender, weight and other factors), but this might not be possible or appropriate. Whenever more than one reference range is supplied, the differences between them SHOULD be provided in the reference range and/or age properties.", + "requirements" : "Knowing what values are considered \"normal\" can help evaluate the significance of a particular result. Need to be able to provide multiple reference ranges for different contexts.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.referenceRange", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "obs-3", + "severity" : "error", + "human" : "Must have at least a low or a high or text", + "expression" : "low.exists() or high.exists() or text.exists()", + "xpath" : "(exists(f:low) or exists(f:high)or exists(f:text))", + "source" : "http://hl7.org/fhir/StructureDefinition/Observation" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX.7" + }, + { + "identity" : "rim", + "map" : "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" + }] + }, + { + "id" : "Observation.referenceRange.id", + "path" : "Observation.referenceRange.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.referenceRange.extension", + "path" : "Observation.referenceRange.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.referenceRange.modifierExtension", + "path" : "Observation.referenceRange.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.referenceRange.low", + "path" : "Observation.referenceRange.low", + "short" : "Low Range, if relevant", + "definition" : "The value of the low bound of the reference range. The low bound of the reference range endpoint is inclusive of the value (e.g. reference range is >=5 - <=9). If the low bound is omitted, it is assumed to be meaningless (e.g. reference range is <=2.3).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.low", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Quantity", + "profile" : ["http://hl7.org/fhir/StructureDefinition/SimpleQuantity"] + }], + "condition" : ["obs-3"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX-7" + }, + { + "identity" : "rim", + "map" : "value:IVL_PQ.low" + }] + }, + { + "id" : "Observation.referenceRange.high", + "path" : "Observation.referenceRange.high", + "short" : "High Range, if relevant", + "definition" : "The value of the high bound of the reference range. The high bound of the reference range endpoint is inclusive of the value (e.g. reference range is >=5 - <=9). If the high bound is omitted, it is assumed to be meaningless (e.g. reference range is >= 2.3).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.high", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Quantity", + "profile" : ["http://hl7.org/fhir/StructureDefinition/SimpleQuantity"] + }], + "condition" : ["obs-3"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX-7" + }, + { + "identity" : "rim", + "map" : "value:IVL_PQ.high" + }] + }, + { + "id" : "Observation.referenceRange.type", + "path" : "Observation.referenceRange.type", + "short" : "Reference range qualifier", + "definition" : "Codes to indicate the what part of the targeted reference population it applies to. For example, the normal or therapeutic range.", + "comment" : "This SHOULD be populated if there is more than one range. If this element is not present then the normal range is assumed.", + "requirements" : "Need to be able to say what kind of reference range this is - normal, recommended, therapeutic, etc., - for proper interpretation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.type", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationRangeMeaning" + }], + "strength" : "preferred", + "description" : "Code for the meaning of a reference range.", + "valueSet" : "http://hl7.org/fhir/ValueSet/referencerange-meaning" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 260245000 |Findings values| OR \r< 365860008 |General clinical state finding| \rOR \r< 250171008 |Clinical history or observation findings| OR \r< 415229000 |Racial group| OR \r< 365400002 |Finding of puberty stage| OR\r< 443938003 |Procedure carried out on subject|" + }, + { + "identity" : "v2", + "map" : "OBX-10" + }, + { + "identity" : "rim", + "map" : "interpretationCode" + }] + }, + { + "id" : "Observation.referenceRange.appliesTo", + "path" : "Observation.referenceRange.appliesTo", + "short" : "Reference range population", + "definition" : "Codes to indicate the target population this reference range applies to. For example, a reference range may be based on the normal population or a particular sex or race. Multiple `appliesTo` are interpreted as an \"AND\" of the target populations. For example, to represent a target population of African American females, both a code of female and a code for African American would be used.", + "comment" : "This SHOULD be populated if there is more than one range. If this element is not present then the normal population is assumed.", + "requirements" : "Need to be able to identify the target population for proper interpretation.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.referenceRange.appliesTo", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationRangeType" + }], + "strength" : "example", + "description" : "Codes identifying the population the reference range applies to.", + "valueSet" : "http://hl7.org/fhir/ValueSet/referencerange-appliesto" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 260245000 |Findings values| OR \r< 365860008 |General clinical state finding| \rOR \r< 250171008 |Clinical history or observation findings| OR \r< 415229000 |Racial group| OR \r< 365400002 |Finding of puberty stage| OR\r< 443938003 |Procedure carried out on subject|" + }, + { + "identity" : "v2", + "map" : "OBX-10" + }, + { + "identity" : "rim", + "map" : "interpretationCode" + }] + }, + { + "id" : "Observation.referenceRange.age", + "path" : "Observation.referenceRange.age", + "short" : "Applicable age range, if relevant", + "definition" : "The age at which this reference range is applicable. This is a neonatal age (e.g. number of weeks at term) if the meaning says so.", + "requirements" : "Some analytes vary greatly over age.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.age", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Range" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "outboundRelationship[typeCode=PRCN].targetObservationCriterion[code=\"age\"].value" + }] + }, + { + "id" : "Observation.referenceRange.text", + "path" : "Observation.referenceRange.text", + "short" : "Text based reference range in an observation", + "definition" : "Text based reference range in an observation which may be used when a quantitative range is not appropriate for an observation. An example would be a reference value of \"Negative\" or a list or table of \"normals\".", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX-7" + }, + { + "identity" : "rim", + "map" : "value:ST" + }] + }, + { + "id" : "Observation.hasMember", + "path" : "Observation.hasMember", + "short" : "Related resource that belongs to the Observation group", + "definition" : "This observation is a group observation (e.g. a battery, a panel of tests, a set of vital sign measurements) that includes the target as a member of the group.", + "comment" : "When using this element, an observation will typically have either a value or a set of related resources, although both may be present in some cases. For a discussion on the ways Observations can assembled in groups together, see [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below. Note that a system may calculate results from [QuestionnaireResponse](http://hl7.org/fhir/R4/questionnaireresponse.html) into a final score and represent the score as an Observation.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.hasMember", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Observation", + "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse", + "http://hl7.org/fhir/StructureDefinition/MolecularSequence"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "Relationships established by OBX-4 usage" + }, + { + "identity" : "rim", + "map" : "outBoundRelationship" + }] + }, + { + "id" : "Observation.derivedFrom", + "path" : "Observation.derivedFrom", + "short" : "Related measurements the observation is made from", + "definition" : "The target resource that represents a measurement from which this observation value is derived. For example, a calculated anion gap or a fetal measurement based on an ultrasound image.", + "comment" : "All the reference choices that are listed in this element can represent clinical observations and other measurements that may be the source for a derived value. The most common reference will be another Observation. For a discussion on the ways Observations can assembled in groups together, see [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.derivedFrom", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/DocumentReference", + "http://hl7.org/fhir/StructureDefinition/ImagingStudy", + "http://hl7.org/fhir/StructureDefinition/Media", + "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse", + "http://hl7.org/fhir/StructureDefinition/Observation", + "http://hl7.org/fhir/StructureDefinition/MolecularSequence"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "Relationships established by OBX-4 usage" + }, + { + "identity" : "rim", + "map" : ".targetObservation" + }] + }, + { + "id" : "Observation.component", + "path" : "Observation.component", + "short" : "Component results", + "definition" : "Some observations have multiple component observations. These component observations are expressed as separate code value pairs that share the same attributes. Examples include systolic and diastolic component observations for blood pressure measurement and multiple component observations for genetics observations.", + "comment" : "For a discussion on the ways Observations can be assembled in groups together see [Notes](http://hl7.org/fhir/R4/observation.html#notes) below.", + "requirements" : "Component observations share the same attributes in the Observation resource as the primary observation and are always treated a part of a single observation (they are not separable). However, the reference range for the primary observation value is not inherited by the component values and is required when appropriate for each component observation.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.component", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "containment by OBX-4?" + }, + { + "identity" : "rim", + "map" : "outBoundRelationship[typeCode=COMP]" + }] + }, + { + "id" : "Observation.component.id", + "path" : "Observation.component.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.component.extension", + "path" : "Observation.component.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.component.modifierExtension", + "path" : "Observation.component.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.component.code", + "path" : "Observation.component.code", + "short" : "Type of component observation (code / type)", + "definition" : "Describes what was observed. Sometimes this is called the observation \"code\".", + "comment" : "*All* code-value and component.code-component.value pairs need to be taken into account to correctly understand the meaning of the observation.", + "requirements" : "Knowing what kind of observation is being made is essential to understanding the observation.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Observation.component.code", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationCode" + }], + "strength" : "example", + "description" : "Codes identifying names of simple observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-codes" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.what[x]" + }, + { + "identity" : "sct-concept", + "map" : "< 363787002 |Observable entity| OR \r< 386053000 |Evaluation procedure|" + }, + { + "identity" : "v2", + "map" : "OBX-3" + }, + { + "identity" : "rim", + "map" : "code" + }] + }, + { + "id" : "Observation.component.value[x]", + "path" : "Observation.component.value[x]", + "short" : "Actual component result", + "definition" : "The information determined as a result of making the observation, if the information has a simple value.", + "comment" : "Used when observation has a set of component observations. An observation may have both a value (e.g. an Apgar score) and component observations (the observations from which the Apgar score was derived). If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", + "requirements" : "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.component.value[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Quantity" + }, + { + "code" : "CodeableConcept" + }, + { + "code" : "string" + }, + { + "code" : "boolean" + }, + { + "code" : "integer" + }, + { + "code" : "Range" + }, + { + "code" : "Ratio" + }, + { + "code" : "SampledData" + }, + { + "code" : "time" + }, + { + "code" : "dateTime" + }, + { + "code" : "Period" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "363714003 |Interprets| < 441742003 |Evaluation finding|" + }, + { + "identity" : "v2", + "map" : "OBX.2, OBX.5, OBX.6" + }, + { + "identity" : "rim", + "map" : "value" + }, + { + "identity" : "sct-attr", + "map" : "363714003 |Interprets|" + }] + }, + { + "id" : "Observation.component.dataAbsentReason", + "path" : "Observation.component.dataAbsentReason", + "short" : "Why the component result is missing", + "definition" : "Provides a reason why the expected value in the element Observation.component.value[x] is missing.", + "comment" : "\"Null\" or exceptional values can be represented two ways in FHIR Observations. One way is to simply include them in the value set and represent the exceptions in the value. For example, measurement values for a serology test could be \"detected\", \"not detected\", \"inconclusive\", or \"test not done\". \n\nThe alternate way is to use the value element for actual observations and use the explicit dataAbsentReason element to record exceptional values. For example, the dataAbsentReason code \"error\" could be used when the measurement was not completed. Because of these options, use-case agreements are required to interpret general observations for exceptional values.", + "requirements" : "For many results it is necessary to handle exceptional values in measurements.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.component.dataAbsentReason", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["obs-6"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationValueAbsentReason" + }], + "strength" : "extensible", + "description" : "Codes specifying why the result (`Observation.value[x]`) is missing.", + "valueSet" : "http://hl7.org/fhir/ValueSet/data-absent-reason" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "N/A" + }, + { + "identity" : "rim", + "map" : "value.nullFlavor" + }] + }, + { + "id" : "Observation.component.interpretation", + "path" : "Observation.component.interpretation", + "short" : "High, low, normal, etc.", + "definition" : "A categorical assessment of an observation value. For example, high, low, normal.", + "comment" : "Historically used for laboratory results (known as 'abnormal flag' ), its use extends to other use cases where coded interpretations are relevant. Often reported as one or more simple compact codes this element is often placed adjacent to the result value in reports and flow sheets to signal the meaning/normalcy status of the result.", + "requirements" : "For some results, particularly numeric results, an interpretation is necessary to fully understand the significance of a result.", + "alias" : ["Abnormal Flag"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.component.interpretation", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationInterpretation" + }], + "strength" : "extensible", + "description" : "Codes identifying interpretations of observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-interpretation" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 260245000 |Findings values|" + }, + { + "identity" : "v2", + "map" : "OBX-8" + }, + { + "identity" : "rim", + "map" : "interpretationCode" + }, + { + "identity" : "sct-attr", + "map" : "363713009 |Has interpretation|" + }] + }, + { + "id" : "Observation.component.referenceRange", + "path" : "Observation.component.referenceRange", + "short" : "Provides guide for interpretation of component result", + "definition" : "Guidance on how to interpret the value by comparison to a normal or recommended range.", + "comment" : "Most observations only have one generic reference range. Systems MAY choose to restrict to only supplying the relevant reference range based on knowledge about the patient (e.g., specific to the patient's age, gender, weight and other factors), but this might not be possible or appropriate. Whenever more than one reference range is supplied, the differences between them SHOULD be provided in the reference range and/or age properties.", + "requirements" : "Knowing what values are considered \"normal\" can help evaluate the significance of a particular result. Need to be able to provide multiple reference ranges for different contexts.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.component.referenceRange", + "min" : 0, + "max" : "*" + }, + "contentReference" : "http://hl7.org/fhir/StructureDefinition/Observation#Observation.referenceRange", + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX.7" + }, + { + "identity" : "rim", + "map" : "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" + }] + }] + }, + "differential" : { + "element" : [{ + "id" : "Observation", + "path" : "Observation" + }, + { + "id" : "Observation.code", + "path" : "Observation.code", + "patternCodeableConcept" : { + "coding" : [{ + "system" : "http://terminology.hl7.org/CodeSystem/v3-RoleCode", + "code" : "FAMMEMB", + "display" : "family member" + }] + } + }, + { + "id" : "Observation.code.text", + "path" : "Observation.code.text", + "patternString" : "Family Relationship" + }, + { + "id" : "Observation.value[x]", + "path" : "Observation.value[x]", + "slicing" : { + "discriminator" : [{ + "type" : "type", + "path" : "$this" + }], + "ordered" : false, + "rules" : "open" + }, + "type" : [{ + "code" : "CodeableConcept" + }] + }, + { + "id" : "Observation.valueCodeableConcept", + "path" : "Observation.valueCodeableConcept", + "min" : 0, + "max" : "1", + "binding" : { + "strength" : "extensible", + "valueSet" : "http://terminology.hl7.org/ValueSet/v3-FamilyMember" + } + }] + } } \ No newline at end of file diff --git a/StructureDefinition-family-relationship.profile.history.html b/StructureDefinition-family-relationship.profile.history.html index a2e4dd36..6440925e 100644 --- a/StructureDefinition-family-relationship.profile.history.html +++ b/StructureDefinition-family-relationship.profile.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -298,7 +298,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Change History</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -356,7 +356,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-family-relationship.profile.json.html b/StructureDefinition-family-relationship.profile.json.html index b28edf0e..113fb1b1 100644 --- a/StructureDefinition-family-relationship.profile.json.html +++ b/StructureDefinition-family-relationship.profile.json.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - JSON Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -342,7 +342,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - JSON Profile</h2> "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a>" : "FamilyRelationship", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a>" : "NCPI Family Relationship", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a>" : "draft", - "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>" : [ { @@ -3383,7 +3383,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - JSON Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-family-relationship.profile.ttl.html b/StructureDefinition-family-relationship.profile.ttl.html index 02625567..ddd2871a 100644 --- a/StructureDefinition-family-relationship.profile.ttl.html +++ b/StructureDefinition-family-relationship.profile.ttl.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - TTL Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -329,11 +329,11 @@ <h2 id="root">Resource Profile: FamilyRelationship - TTL Profile</h2> a fhir:StructureDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "family-relationship"]; + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "family-relationship"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description &amp; Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-family-relationship-definitions.html#Observation\">Observation</a><a name=\"Observation\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observation.html\">Observation</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Measurements and simple assertions</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-family-relationship-definitions.html#Observation.code\">code</a><a name=\"Observation.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Type of observation (code / type)</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck111.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#CodeableConcept.coding\">coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..*</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Code defined by a terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">(complex)</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1110.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">http://terminology.hl7.org/CodeSystem/v3-RoleCode</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1110.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">FAMMEMB</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1100.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">family member</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck100.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-family-relationship-definitions.html#Observation.code.text\">text</a><a name=\"Observation.code.text\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Plain text representation of the concept</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">Family Relationship</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck12.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_slice.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Slice Definition\" class=\"hierarchy\"/> <a style=\"font-style: italic\" href=\"StructureDefinition-family-relationship-definitions.html#Observation.value[x]\">value[x]</a><a name=\"Observation.value_x_\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"font-style: italic\"/><span style=\"opacity: 0.5; font-style: italic\">0</span><span style=\"opacity: 0.5; font-style: italic\">..</span><span style=\"opacity: 0.5; font-style: italic\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"font-style: italic\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5; font-style: italic\">Actual result</span><br style=\"font-style: italic\"/><span style=\"font-weight:bold; font-style: italic\">Slice: </span><span style=\"font-style: italic\">Unordered, Open by type:$this</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-family-relationship-definitions.html#Observation.valueCodeableConcept\">valueCodeableConcept</a><a name=\"Observation.valueCodeableConcept\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">0..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Actual result</span><br/><span style=\"font-weight:bold\">Binding: </span><a href=\"http://terminology.hl7.org/5.0.0/ValueSet-v3-FamilyMember.html\">FamilyMember</a> (<a href=\"http://hl7.org/fhir/R4/terminologies.html#extensible\" title=\"To be conformant, the concept in this element SHALL be from the specified value set if any of the codes within the value set can apply to the concept being communicated. If the value set does not cover the concept (based on human review), alternate codings (or, data type allowing, text) may be included instead.\">extensible</a>)</td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -342,14 +342,14 @@ <h2 id="root">Resource Profile: FamilyRelationship - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "patient" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "FamilyRelationship"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI Family Relationship"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "FamilyRelationship"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI Family Relationship"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">fhir:StructureDefinition.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -365,9 +365,9 @@ <h2 id="root">Resource Profile: FamilyRelationship - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Representation of a family relationship."]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Representation of a family relationship."]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping">fhir:StructureDefinition.mapping</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "workflow" ]; @@ -398,15 +398,15 @@ <h2 id="root">Resource Profile: FamilyRelationship - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "sct-attr" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.uri">fhir:StructureDefinition.mapping.uri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://snomed.org/attributebinding" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.name">fhir:StructureDefinition.mapping.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "SNOMED CT Attribute Binding" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Observation"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Observation"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.baseDefinition">fhir:StructureDefinition.baseDefinition</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/Observation"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/Observation> - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot">fhir:StructureDefinition.snapshot</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot.element">fhir:StructureDefinition.snapshot.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2915,7 +2915,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.identity">fhir:ElementDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "rim" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.map">fhir:ElementDefinition.mapping.map</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" ] ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential">fhir:StructureDefinition.differential</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential.element">fhir:StructureDefinition.differential.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2957,7 +2957,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.binding.valueSet">fhir:ElementDefinition.binding.valueSet</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://terminology.hl7.org/ValueSet/v3-FamilyMember"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://terminology.hl7.org/ValueSet/v3-FamilyMember> ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -3019,7 +3019,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - TTL Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-family-relationship.profile.xml.html b/StructureDefinition-family-relationship.profile.xml.html index 272ead9b..1932b4b9 100644 --- a/StructureDefinition-family-relationship.profile.xml.html +++ b/StructureDefinition-family-relationship.profile.xml.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - XML Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -350,7 +350,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - XML Profile</h2> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="FamilyRelationship"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI Family Relationship"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> - <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -3171,7 +3171,7 @@ <h2 id="root">Resource Profile: FamilyRelationship - XML Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-family-relationship.ttl b/StructureDefinition-family-relationship.ttl index ef4bd168..7207e200 100644 --- a/StructureDefinition-family-relationship.ttl +++ b/StructureDefinition-family-relationship.ttl @@ -7,11 +7,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship> a fhir:StructureDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "family-relationship"]; + fhir:Resource.id [ fhir:value "family-relationship"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-family-relationship-definitions.html#Observation\">Observation</a><a name=\"Observation\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observation.html\">Observation</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Measurements and simple assertions</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-family-relationship-definitions.html#Observation.code\">code</a><a name=\"Observation.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Type of observation (code / type)</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck111.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#CodeableConcept.coding\">coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..*</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Code defined by a terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">(complex)</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1110.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">http://terminology.hl7.org/CodeSystem/v3-RoleCode</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1110.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">FAMMEMB</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1100.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">family member</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck100.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-family-relationship-definitions.html#Observation.code.text\">text</a><a name=\"Observation.code.text\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Plain text representation of the concept</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">Family Relationship</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck12.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_slice.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Slice Definition\" class=\"hierarchy\"/> <a style=\"font-style: italic\" href=\"StructureDefinition-family-relationship-definitions.html#Observation.value[x]\">value[x]</a><a name=\"Observation.value_x_\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"font-style: italic\"/><span style=\"opacity: 0.5; font-style: italic\">0</span><span style=\"opacity: 0.5; font-style: italic\">..</span><span style=\"opacity: 0.5; font-style: italic\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"font-style: italic\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5; font-style: italic\">Actual result</span><br style=\"font-style: italic\"/><span style=\"font-weight:bold; font-style: italic\">Slice: </span><span style=\"font-style: italic\">Unordered, Open by type:$this</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-family-relationship-definitions.html#Observation.valueCodeableConcept\">valueCodeableConcept</a><a name=\"Observation.valueCodeableConcept\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">0..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Actual result</span><br/><span style=\"font-weight:bold\">Binding: </span><a href=\"http://terminology.hl7.org/5.0.0/ValueSet-v3-FamilyMember.html\">FamilyMember</a> (<a href=\"http://hl7.org/fhir/R4/terminologies.html#extensible\" title=\"To be conformant, the concept in this element SHALL be from the specified value set if any of the codes within the value set can apply to the concept being communicated. If the value set does not cover the concept (based on human review), alternate codings (or, data type allowing, text) may be included instead.\">extensible</a>)</td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -20,14 +20,14 @@ fhir:index 1; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; fhir:Extension.valueCode [ fhir:value "patient" ] - ]; - fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship"]; - fhir:StructureDefinition.version [ fhir:value "0.2.0"]; - fhir:StructureDefinition.name [ fhir:value "FamilyRelationship"]; - fhir:StructureDefinition.title [ fhir:value "NCPI Family Relationship"]; - fhir:StructureDefinition.status [ fhir:value "draft"]; - fhir:StructureDefinition.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship"]; # + fhir:StructureDefinition.version [ fhir:value "0.2.0"]; # + fhir:StructureDefinition.name [ fhir:value "FamilyRelationship"]; # + fhir:StructureDefinition.title [ fhir:value "NCPI Family Relationship"]; # + fhir:StructureDefinition.status [ fhir:value "draft"]; # + fhir:StructureDefinition.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:StructureDefinition.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -45,9 +45,9 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:StructureDefinition.description [ fhir:value "Representation of a family relationship."]; - fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; + ]; # + fhir:StructureDefinition.description [ fhir:value "Representation of a family relationship."]; # + fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; # fhir:StructureDefinition.mapping [ fhir:index 0; fhir:StructureDefinition.mapping.identity [ fhir:value "workflow" ]; @@ -78,15 +78,15 @@ fhir:StructureDefinition.mapping.identity [ fhir:value "sct-attr" ]; fhir:StructureDefinition.mapping.uri [ fhir:value "http://snomed.org/attributebinding" ]; fhir:StructureDefinition.mapping.name [ fhir:value "SNOMED CT Attribute Binding" ] - ]; - fhir:StructureDefinition.kind [ fhir:value "resource"]; - fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; - fhir:StructureDefinition.type [ fhir:value "Observation"]; + ]; # + fhir:StructureDefinition.kind [ fhir:value "resource"]; # + fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; # + fhir:StructureDefinition.type [ fhir:value "Observation"]; # fhir:StructureDefinition.baseDefinition [ fhir:value "http://hl7.org/fhir/StructureDefinition/Observation"; fhir:link <http://hl7.org/fhir/StructureDefinition/Observation> - ]; - fhir:StructureDefinition.derivation [ fhir:value "constraint"]; + ]; # + fhir:StructureDefinition.derivation [ fhir:value "constraint"]; # fhir:StructureDefinition.snapshot [ fhir:StructureDefinition.snapshot.element [ fhir:index 0; @@ -3176,7 +3176,7 @@ fhir:ElementDefinition.mapping.map [ fhir:value "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" ] ] ] - ]; + ]; # fhir:StructureDefinition.differential [ fhir:StructureDefinition.differential.element [ fhir:index 0; @@ -3230,7 +3230,7 @@ ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/StructureDefinition-family-relationship.xlsx b/StructureDefinition-family-relationship.xlsx index 5cfeacee..d06dec35 100644 Binary files a/StructureDefinition-family-relationship.xlsx and b/StructureDefinition-family-relationship.xlsx differ diff --git a/StructureDefinition-family-relationship.xml b/StructureDefinition-family-relationship.xml index 7f4fea24..4b0ba392 100644 --- a/StructureDefinition-family-relationship.xml +++ b/StructureDefinition-family-relationship.xml @@ -25,7 +25,7 @@ <name value="FamilyRelationship"/> <title value="NCPI Family Relationship"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/StructureDefinition-ncpi-drs-attachment-definitions.html b/StructureDefinition-ncpi-drs-attachment-definitions.html index 2f174982..3ccf5edb 100644 --- a/StructureDefinition-ncpi-drs-attachment-definitions.html +++ b/StructureDefinition-ncpi-drs-attachment-definitions.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -287,7 +287,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - Detailed Descriptions</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -317,7 +317,8 @@ <h2 id="root">Data Type Profile: DRSAttachment - Detailed Descriptions</h2> </ul> <a name="tabs-diff"> </a> <div id="tabs-diff"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Attachment"> </a><span style="color: grey">1.</span> <b>Attachment</b><a href="#diff_Attachment" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">must-be-drs-uri</b>: attachment.url must start with ^drs://. A drs:// hostname-based URI, as defined in the DRS documentation, that tells clients how to access this object. The intent of this field is to make DRS objects self-contained, and therefore easier for clients to store and pass around. For example, if you arrive at this DRS JSON by resolving a compact identifier-based DRS URI, the `self_uri` presents you with a hostname and properly encoded DRS ID for use in subsequent `access` endpoint calls. (: $this.url.matches('^drs://.*'))</td></tr> @@ -326,7 +327,8 @@ <h2 id="root">Data Type Profile: DRSAttachment - Detailed Descriptions</h2> </div> <a name="tabs-key"> </a> <div id="tabs-key"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="key_Attachment"> </a><span style="color: grey">1.</span> <b>Attachment</b><a href="#key_Attachment" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><span style='color:DarkGray'><p>For referring to data content defined in other formats.</p> </span></td></tr> @@ -340,7 +342,8 @@ <h2 id="root">Data Type Profile: DRSAttachment - Detailed Descriptions</h2> </div> <a name="tabs-snap"> </a> <div id="tabs-snap"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Attachment"> </a><span style="color: grey">1.</span> <b>Attachment</b><a href="#Attachment" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>For referring to data content defined in other formats.</p> </td></tr> @@ -358,7 +361,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -514,7 +517,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - Detailed Descriptions</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-drs-attachment-examples.html b/StructureDefinition-ncpi-drs-attachment-examples.html index 0751ff78..d90280ac 100644 --- a/StructureDefinition-ncpi-drs-attachment-examples.html +++ b/StructureDefinition-ncpi-drs-attachment-examples.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -287,7 +287,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - Examples</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -357,7 +357,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - Examples</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-drs-attachment-mappings.html b/StructureDefinition-ncpi-drs-attachment-mappings.html index 9049fd19..fea0f075 100644 --- a/StructureDefinition-ncpi-drs-attachment-mappings.html +++ b/StructureDefinition-ncpi-drs-attachment-mappings.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -287,7 +287,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - Mappings</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -377,7 +377,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - Mappings</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-drs-attachment-testing.html b/StructureDefinition-ncpi-drs-attachment-testing.html index 1b2a8f5a..5b3baf21 100644 --- a/StructureDefinition-ncpi-drs-attachment-testing.html +++ b/StructureDefinition-ncpi-drs-attachment-testing.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -287,7 +287,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - Testing</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -352,7 +352,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - Testing</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-drs-attachment.html b/StructureDefinition-ncpi-drs-attachment.html index d94c4e88..058bc28c 100644 --- a/StructureDefinition-ncpi-drs-attachment.html +++ b/StructureDefinition-ncpi-drs-attachment.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -311,7 +311,7 @@ <h2 id="root">Data Type Profile: Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -782,7 +782,7 @@ <h4>Constraints</h4> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-drs-attachment.json b/StructureDefinition-ncpi-drs-attachment.json index 5801938e..909ad82d 100644 --- a/StructureDefinition-ncpi-drs-attachment.json +++ b/StructureDefinition-ncpi-drs-attachment.json @@ -1,603 +1,503 @@ -{ - "resourceType": "StructureDefinition", - "id": "ncpi-drs-attachment", - "text": { - "status": "extensions", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck0.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-drs-attachment-definitions.html#Attachment\">Attachment</a><a name=\"Attachment\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"padding-left: 3px; padding-right: 3px; border: 1px maroon solid; font-weight: bold; color: #301212; background-color: #fdf4f4;\" href=\"http://hl7.org/fhir/R4conformance-rules.html#constraints\" title=\"This element has or is affected by constraints (must-be-drs-uri)\">C</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#Attachment\">Attachment</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Content in a format defined elsewhere</span><br/><span style=\"font-weight:bold\">must-be-drs-uri: </span>attachment.url must start with ^drs://. A drs:// hostname-based URI, as defined in the DRS documentation, that tells clients how to access this object. The intent of this field is to make DRS objects self-contained, and therefore easier for clients to store and pass around. For example, if you arrive at this DRS JSON by resolving a compact identifier-based DRS URI, the `self_uri` presents you with a hostname and properly encoded DRS ID for use in subsequent `access` endpoint calls.</td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - }, - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment", - "version": "0.2.0", - "name": "DRSAttachment", - "title": "DRS Attachment", - "status": "draft", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "A FHIR Attachment with a DRS url.", - "fhirVersion": "4.0.1", - "mapping": [ - { - "identity": "v2", - "uri": "http://hl7.org/v2", - "name": "HL7 v2 Mapping" - }, - { - "identity": "rim", - "uri": "http://hl7.org/v3", - "name": "RIM Mapping" - } - ], - "kind": "complex-type", - "abstract": false, - "type": "Attachment", - "baseDefinition": "http://hl7.org/fhir/StructureDefinition/Attachment", - "derivation": "constraint", - "snapshot": { - "element": [ - { - "id": "Attachment", - "path": "Attachment", - "short": "Content in a format defined elsewhere", - "definition": "For referring to data content defined in other formats.", - "comment": "When providing a summary view (for example with Observation.value[x]) Attachment should be represented with a brief display text such as \"Signed Procedure Consent\".", - "min": 0, - "max": "*", - "base": { - "path": "Attachment", - "min": 0, - "max": "*" - }, - "condition": [ - "ele-1" - ], - "constraint": [ - { - "key": "att-1", - "severity": "error", - "human": "If the Attachment has data, it SHALL have a contentType", - "expression": "data.empty() or contentType.exists()", - "xpath": "not(exists(f:data)) or exists(f:contentType)", - "source": "http://hl7.org/fhir/StructureDefinition/Attachment" - }, - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "must-be-drs-uri", - "severity": "error", - "human": "attachment.url must start with ^drs://. A drs:// hostname-based URI, as defined in the DRS documentation, that tells clients how to access this object. The intent of this field is to make DRS objects self-contained, and therefore easier for clients to store and pass around. For example, if you arrive at this DRS JSON by resolving a compact identifier-based DRS URI, the `self_uri` presents you with a hostname and properly encoded DRS ID for use in subsequent `access` endpoint calls.", - "expression": "$this.url.matches('^drs://.*')", - "source": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment" - } - ], - "isModifier": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - }, - { - "identity": "v2", - "map": "ED/RP" - }, - { - "identity": "rim", - "map": "ED" - } - ] - }, - { - "id": "Attachment.id", - "path": "Attachment.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Attachment.extension", - "path": "Attachment.extension", - "slicing": { - "discriminator": [ - { - "type": "value", - "path": "url" - } - ], - "description": "Extensions are always sliced by (at least) url", - "rules": "open" - }, - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Attachment.contentType", - "path": "Attachment.contentType", - "short": "Mime type of the content, with charset etc.", - "definition": "Identifies the type of the data in the attachment and allows a method to be chosen to interpret or render the data. Includes mime type parameters such as charset where appropriate.", - "requirements": "Processors of the data need to be able to know how to interpret the data.", - "min": 0, - "max": "1", - "base": { - "path": "Attachment.contentType", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "example": [ - { - "label": "General", - "valueCode": "text/plain; charset=UTF-8, image/png" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "MimeType" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "required", - "description": "The mime type of an attachment. Any valid mime type is allowed.", - "valueSet": "http://hl7.org/fhir/ValueSet/mimetypes|4.0.1" - }, - "mapping": [ - { - "identity": "v2", - "map": "ED.2+ED.3/RP.2+RP.3. Note conversion may be needed if old style values are being used" - }, - { - "identity": "rim", - "map": "./mediaType, ./charset" - } - ] - }, - { - "id": "Attachment.language", - "path": "Attachment.language", - "short": "Human language of the content (BCP-47)", - "definition": "The human language of the content. The value can be any valid value according to BCP 47.", - "requirements": "Users need to be able to choose between the languages in a set of attachments.", - "min": 0, - "max": "1", - "base": { - "path": "Attachment.language", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "example": [ - { - "label": "General", - "valueCode": "en-AU" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", - "valueCanonical": "http://hl7.org/fhir/ValueSet/all-languages" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "Language" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "preferred", - "description": "A human language.", - "valueSet": "http://hl7.org/fhir/ValueSet/languages" - }, - "mapping": [ - { - "identity": "rim", - "map": "./language" - } - ] - }, - { - "id": "Attachment.data", - "path": "Attachment.data", - "short": "Data inline, base64ed", - "definition": "The actual data of the attachment - a sequence of bytes, base64 encoded.", - "comment": "The base64-encoded data SHALL be expressed in the same character set as the base resource XML or JSON.", - "requirements": "The data needs to able to be transmitted inline.", - "min": 0, - "max": "1", - "base": { - "path": "Attachment.data", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "base64Binary" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "ED.5" - }, - { - "identity": "rim", - "map": "./data" - } - ] - }, - { - "id": "Attachment.url", - "path": "Attachment.url", - "short": "Uri where the data can be found", - "definition": "A location where the data can be accessed.", - "comment": "If both data and url are provided, the url SHALL point to the same content as the data contains. Urls may be relative references or may reference transient locations such as a wrapping envelope using cid: though this has ramifications for using signatures. Relative URLs are interpreted relative to the service url, like a resource reference, rather than relative to the resource itself. If a URL is provided, it SHALL resolve to actual data.", - "requirements": "The data needs to be transmitted by reference.", - "min": 0, - "max": "1", - "base": { - "path": "Attachment.url", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "url" - } - ], - "example": [ - { - "label": "General", - "valueUrl": "http://www.acme.com/logo-small.png" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "RP.1+RP.2 - if they refer to a URL (see v2.6)" - }, - { - "identity": "rim", - "map": "./reference/literal" - } - ] - }, - { - "id": "Attachment.size", - "path": "Attachment.size", - "short": "Number of bytes of content (if url provided)", - "definition": "The number of bytes of data that make up this attachment (before base64 encoding, if that is done).", - "comment": "The number of bytes is redundant if the data is provided as a base64binary, but is useful if the data is provided as a url reference.", - "requirements": "Representing the size allows applications to determine whether they should fetch the content automatically in advance, or refuse to fetch it at all.", - "min": 0, - "max": "1", - "base": { - "path": "Attachment.size", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "unsignedInt" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A (needs data type R3 proposal)" - } - ] - }, - { - "id": "Attachment.hash", - "path": "Attachment.hash", - "short": "Hash of the data (sha-1, base64ed)", - "definition": "The calculated hash of the data using SHA-1. Represented using base64.", - "comment": "The hash is calculated on the data prior to base64 encoding, if the data is based64 encoded. The hash is not intended to support digital signatures. Where protection against malicious threats a digital signature should be considered, see [Provenance.signature](http://hl7.org/fhir/R4/provenance-definitions.html#Provenance.signature) for mechanism to protect a resource with a digital signature.", - "requirements": "Included so that applications can verify that the contents of a location have not changed due to technical failures (e.g., storage rot, transport glitch, incorrect version).", - "min": 0, - "max": "1", - "base": { - "path": "Attachment.hash", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "base64Binary" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": ".integrityCheck[parent::ED/integrityCheckAlgorithm=\"SHA-1\"]" - } - ] - }, - { - "id": "Attachment.title", - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable", - "valueBoolean": true - } - ], - "path": "Attachment.title", - "short": "Label to display in place of the data", - "definition": "A label or set of text to display in place of the data.", - "requirements": "Applications need a label to display to a human user in place of the actual data if the data cannot be rendered or perceived by the viewer.", - "min": 0, - "max": "1", - "base": { - "path": "Attachment.title", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "example": [ - { - "label": "General", - "valueString": "Official Corporate Logo" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "./title/data" - } - ] - }, - { - "id": "Attachment.creation", - "path": "Attachment.creation", - "short": "Date attachment was first created", - "definition": "The date that the attachment was first created.", - "requirements": "This is often tracked as an integrity issue for use of the attachment.", - "min": 0, - "max": "1", - "base": { - "path": "Attachment.creation", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "dateTime" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A (needs data type R3 proposal)" - } - ] - } - ] - }, - "differential": { - "element": [ - { - "id": "Attachment", - "path": "Attachment", - "constraint": [ - { - "key": "must-be-drs-uri", - "severity": "error", - "human": "attachment.url must start with ^drs://. A drs:// hostname-based URI, as defined in the DRS documentation, that tells clients how to access this object. The intent of this field is to make DRS objects self-contained, and therefore easier for clients to store and pass around. For example, if you arrive at this DRS JSON by resolving a compact identifier-based DRS URI, the `self_uri` presents you with a hostname and properly encoded DRS ID for use in subsequent `access` endpoint calls.", - "expression": "$this.url.matches('^drs://.*')", - "source": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment" - } - ] - } - ] - } +{ + "resourceType" : "StructureDefinition", + "id" : "ncpi-drs-attachment", + "text" : { + "status" : "extensions", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck0.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-drs-attachment-definitions.html#Attachment\">Attachment</a><a name=\"Attachment\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"padding-left: 3px; padding-right: 3px; border: 1px maroon solid; font-weight: bold; color: #301212; background-color: #fdf4f4;\" href=\"http://hl7.org/fhir/R4conformance-rules.html#constraints\" title=\"This element has or is affected by constraints (must-be-drs-uri)\">C</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#Attachment\">Attachment</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Content in a format defined elsewhere</span><br/><span style=\"font-weight:bold\">must-be-drs-uri: </span>attachment.url must start with ^drs://. A drs:// hostname-based URI, as defined in the DRS documentation, that tells clients how to access this object. The intent of this field is to make DRS objects self-contained, and therefore easier for clients to store and pass around. For example, if you arrive at this DRS JSON by resolving a compact identifier-based DRS URI, the `self_uri` presents you with a hostname and properly encoded DRS ID for use in subsequent `access` endpoint calls.</td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" + }, + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment", + "version" : "0.2.0", + "name" : "DRSAttachment", + "title" : "DRS Attachment", + "status" : "draft", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "A FHIR Attachment with a DRS url.", + "fhirVersion" : "4.0.1", + "mapping" : [{ + "identity" : "v2", + "uri" : "http://hl7.org/v2", + "name" : "HL7 v2 Mapping" + }, + { + "identity" : "rim", + "uri" : "http://hl7.org/v3", + "name" : "RIM Mapping" + }], + "kind" : "complex-type", + "abstract" : false, + "type" : "Attachment", + "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/Attachment", + "derivation" : "constraint", + "snapshot" : { + "element" : [{ + "id" : "Attachment", + "path" : "Attachment", + "short" : "Content in a format defined elsewhere", + "definition" : "For referring to data content defined in other formats.", + "comment" : "When providing a summary view (for example with Observation.value[x]) Attachment should be represented with a brief display text such as \"Signed Procedure Consent\".", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Attachment", + "min" : 0, + "max" : "*" + }, + "condition" : ["ele-1"], + "constraint" : [{ + "key" : "att-1", + "severity" : "error", + "human" : "If the Attachment has data, it SHALL have a contentType", + "expression" : "data.empty() or contentType.exists()", + "xpath" : "not(exists(f:data)) or exists(f:contentType)", + "source" : "http://hl7.org/fhir/StructureDefinition/Attachment" + }, + { + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "must-be-drs-uri", + "severity" : "error", + "human" : "attachment.url must start with ^drs://. A drs:// hostname-based URI, as defined in the DRS documentation, that tells clients how to access this object. The intent of this field is to make DRS objects self-contained, and therefore easier for clients to store and pass around. For example, if you arrive at this DRS JSON by resolving a compact identifier-based DRS URI, the `self_uri` presents you with a hostname and properly encoded DRS ID for use in subsequent `access` endpoint calls.", + "expression" : "$this.url.matches('^drs://.*')", + "source" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment" + }], + "isModifier" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }, + { + "identity" : "v2", + "map" : "ED/RP" + }, + { + "identity" : "rim", + "map" : "ED" + }] + }, + { + "id" : "Attachment.id", + "path" : "Attachment.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Attachment.extension", + "path" : "Attachment.extension", + "slicing" : { + "discriminator" : [{ + "type" : "value", + "path" : "url" + }], + "description" : "Extensions are always sliced by (at least) url", + "rules" : "open" + }, + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Attachment.contentType", + "path" : "Attachment.contentType", + "short" : "Mime type of the content, with charset etc.", + "definition" : "Identifies the type of the data in the attachment and allows a method to be chosen to interpret or render the data. Includes mime type parameters such as charset where appropriate.", + "requirements" : "Processors of the data need to be able to know how to interpret the data.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Attachment.contentType", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "example" : [{ + "label" : "General", + "valueCode" : "text/plain; charset=UTF-8, image/png" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "MimeType" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "required", + "description" : "The mime type of an attachment. Any valid mime type is allowed.", + "valueSet" : "http://hl7.org/fhir/ValueSet/mimetypes|4.0.1" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "ED.2+ED.3/RP.2+RP.3. Note conversion may be needed if old style values are being used" + }, + { + "identity" : "rim", + "map" : "./mediaType, ./charset" + }] + }, + { + "id" : "Attachment.language", + "path" : "Attachment.language", + "short" : "Human language of the content (BCP-47)", + "definition" : "The human language of the content. The value can be any valid value according to BCP 47.", + "requirements" : "Users need to be able to choose between the languages in a set of attachments.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Attachment.language", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "example" : [{ + "label" : "General", + "valueCode" : "en-AU" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", + "valueCanonical" : "http://hl7.org/fhir/ValueSet/all-languages" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "Language" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "preferred", + "description" : "A human language.", + "valueSet" : "http://hl7.org/fhir/ValueSet/languages" + }, + "mapping" : [{ + "identity" : "rim", + "map" : "./language" + }] + }, + { + "id" : "Attachment.data", + "path" : "Attachment.data", + "short" : "Data inline, base64ed", + "definition" : "The actual data of the attachment - a sequence of bytes, base64 encoded.", + "comment" : "The base64-encoded data SHALL be expressed in the same character set as the base resource XML or JSON.", + "requirements" : "The data needs to able to be transmitted inline.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Attachment.data", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "base64Binary" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "ED.5" + }, + { + "identity" : "rim", + "map" : "./data" + }] + }, + { + "id" : "Attachment.url", + "path" : "Attachment.url", + "short" : "Uri where the data can be found", + "definition" : "A location where the data can be accessed.", + "comment" : "If both data and url are provided, the url SHALL point to the same content as the data contains. Urls may be relative references or may reference transient locations such as a wrapping envelope using cid: though this has ramifications for using signatures. Relative URLs are interpreted relative to the service url, like a resource reference, rather than relative to the resource itself. If a URL is provided, it SHALL resolve to actual data.", + "requirements" : "The data needs to be transmitted by reference.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Attachment.url", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "url" + }], + "example" : [{ + "label" : "General", + "valueUrl" : "http://www.acme.com/logo-small.png" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "RP.1+RP.2 - if they refer to a URL (see v2.6)" + }, + { + "identity" : "rim", + "map" : "./reference/literal" + }] + }, + { + "id" : "Attachment.size", + "path" : "Attachment.size", + "short" : "Number of bytes of content (if url provided)", + "definition" : "The number of bytes of data that make up this attachment (before base64 encoding, if that is done).", + "comment" : "The number of bytes is redundant if the data is provided as a base64binary, but is useful if the data is provided as a url reference.", + "requirements" : "Representing the size allows applications to determine whether they should fetch the content automatically in advance, or refuse to fetch it at all.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Attachment.size", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "unsignedInt" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A (needs data type R3 proposal)" + }] + }, + { + "id" : "Attachment.hash", + "path" : "Attachment.hash", + "short" : "Hash of the data (sha-1, base64ed)", + "definition" : "The calculated hash of the data using SHA-1. Represented using base64.", + "comment" : "The hash is calculated on the data prior to base64 encoding, if the data is based64 encoded. The hash is not intended to support digital signatures. Where protection against malicious threats a digital signature should be considered, see [Provenance.signature](http://hl7.org/fhir/R4/provenance-definitions.html#Provenance.signature) for mechanism to protect a resource with a digital signature.", + "requirements" : "Included so that applications can verify that the contents of a location have not changed due to technical failures (e.g., storage rot, transport glitch, incorrect version).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Attachment.hash", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "base64Binary" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : ".integrityCheck[parent::ED/integrityCheckAlgorithm=\"SHA-1\"]" + }] + }, + { + "id" : "Attachment.title", + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable", + "valueBoolean" : true + }], + "path" : "Attachment.title", + "short" : "Label to display in place of the data", + "definition" : "A label or set of text to display in place of the data.", + "requirements" : "Applications need a label to display to a human user in place of the actual data if the data cannot be rendered or perceived by the viewer.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Attachment.title", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "example" : [{ + "label" : "General", + "valueString" : "Official Corporate Logo" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "./title/data" + }] + }, + { + "id" : "Attachment.creation", + "path" : "Attachment.creation", + "short" : "Date attachment was first created", + "definition" : "The date that the attachment was first created.", + "requirements" : "This is often tracked as an integrity issue for use of the attachment.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Attachment.creation", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "dateTime" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A (needs data type R3 proposal)" + }] + }] + }, + "differential" : { + "element" : [{ + "id" : "Attachment", + "path" : "Attachment", + "constraint" : [{ + "key" : "must-be-drs-uri", + "severity" : "error", + "human" : "attachment.url must start with ^drs://. A drs:// hostname-based URI, as defined in the DRS documentation, that tells clients how to access this object. The intent of this field is to make DRS objects self-contained, and therefore easier for clients to store and pass around. For example, if you arrive at this DRS JSON by resolving a compact identifier-based DRS URI, the `self_uri` presents you with a hostname and properly encoded DRS ID for use in subsequent `access` endpoint calls.", + "expression" : "$this.url.matches('^drs://.*')", + "source" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment" + }] + }] + } } \ No newline at end of file diff --git a/StructureDefinition-ncpi-drs-attachment.profile.history.html b/StructureDefinition-ncpi-drs-attachment.profile.history.html index 0a264795..3568e80c 100644 --- a/StructureDefinition-ncpi-drs-attachment.profile.history.html +++ b/StructureDefinition-ncpi-drs-attachment.profile.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -288,7 +288,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - Change History</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -346,7 +346,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-drs-attachment.profile.json.html b/StructureDefinition-ncpi-drs-attachment.profile.json.html index 63f6e7ce..3909183d 100644 --- a/StructureDefinition-ncpi-drs-attachment.profile.json.html +++ b/StructureDefinition-ncpi-drs-attachment.profile.json.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -291,7 +291,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - JSON Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -322,7 +322,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - JSON Profile</h2> "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a>" : "DRSAttachment", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a>" : "DRS Attachment", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a>" : "draft", - "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>" : [ { @@ -966,7 +966,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - JSON Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-drs-attachment.profile.ttl.html b/StructureDefinition-ncpi-drs-attachment.profile.ttl.html index d7315553..820a62e8 100644 --- a/StructureDefinition-ncpi-drs-attachment.profile.ttl.html +++ b/StructureDefinition-ncpi-drs-attachment.profile.ttl.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -291,7 +291,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - TTL Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -319,18 +319,18 @@ <h2 id="root">Data Type Profile: DRSAttachment - TTL Profile</h2> a fhir:StructureDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-drs-attachment"]; + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-drs-attachment"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description &amp; Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck0.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-drs-attachment-definitions.html#Attachment\">Attachment</a><a name=\"Attachment\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"padding-left: 3px; padding-right: 3px; border: 1px maroon solid; font-weight: bold; color: #301212; background-color: #fdf4f4;\" href=\"http://hl7.org/fhir/R4conformance-rules.html#constraints\" title=\"This element has or is affected by constraints (must-be-drs-uri)\">C</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#Attachment\">Attachment</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Content in a format defined elsewhere</span><br/><span style=\"font-weight:bold\">must-be-drs-uri: </span>attachment.url must start with ^drs://. A drs:// hostname-based URI, as defined in the DRS documentation, that tells clients how to access this object. The intent of this field is to make DRS objects self-contained, and therefore easier for clients to store and pass around. For example, if you arrive at this DRS JSON by resolving a compact identifier-based DRS URI, the `self_uri` presents you with a hostname and properly encoded DRS ID for use in subsequent `access` endpoint calls.</td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "DRSAttachment"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "DRS Attachment"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "DRSAttachment"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "DRS Attachment"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">fhir:StructureDefinition.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -346,9 +346,9 @@ <h2 id="root">Data Type Profile: DRSAttachment - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "A FHIR Attachment with a DRS url."]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "A FHIR Attachment with a DRS url."]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping">fhir:StructureDefinition.mapping</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "v2" ]; @@ -359,15 +359,15 @@ <h2 id="root">Data Type Profile: DRSAttachment - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "rim" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.uri">fhir:StructureDefinition.mapping.uri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/v3" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.name">fhir:StructureDefinition.mapping.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "RIM Mapping" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "complex-type"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Attachment"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "complex-type"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Attachment"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.baseDefinition">fhir:StructureDefinition.baseDefinition</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/Attachment"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/Attachment> - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot">fhir:StructureDefinition.snapshot</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot.element">fhir:StructureDefinition.snapshot.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -814,7 +814,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.identity">fhir:ElementDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "rim" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.map">fhir:ElementDefinition.mapping.map</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "N/A (needs data type R3 proposal)" ] ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential">fhir:StructureDefinition.differential</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential.element">fhir:StructureDefinition.differential.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -829,7 +829,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.constraint.source">fhir:ElementDefinition.constraint.source</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment> ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -891,7 +891,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - TTL Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-drs-attachment.profile.xml.html b/StructureDefinition-ncpi-drs-attachment.profile.xml.html index 5a0c9736..4b18603b 100644 --- a/StructureDefinition-ncpi-drs-attachment.profile.xml.html +++ b/StructureDefinition-ncpi-drs-attachment.profile.xml.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -291,7 +291,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - XML Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -324,7 +324,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - XML Profile</h2> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="DRSAttachment"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="DRS Attachment"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> - <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -896,7 +896,7 @@ <h2 id="root">Data Type Profile: DRSAttachment - XML Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-drs-attachment.ttl b/StructureDefinition-ncpi-drs-attachment.ttl index 5b694619..ba8572f7 100644 --- a/StructureDefinition-ncpi-drs-attachment.ttl +++ b/StructureDefinition-ncpi-drs-attachment.ttl @@ -7,18 +7,18 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment> a fhir:StructureDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "ncpi-drs-attachment"]; + fhir:Resource.id [ fhir:value "ncpi-drs-attachment"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck0.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-drs-attachment-definitions.html#Attachment\">Attachment</a><a name=\"Attachment\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"padding-left: 3px; padding-right: 3px; border: 1px maroon solid; font-weight: bold; color: #301212; background-color: #fdf4f4;\" href=\"http://hl7.org/fhir/R4conformance-rules.html#constraints\" title=\"This element has or is affected by constraints (must-be-drs-uri)\">C</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#Attachment\">Attachment</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Content in a format defined elsewhere</span><br/><span style=\"font-weight:bold\">must-be-drs-uri: </span>attachment.url must start with ^drs://. A drs:// hostname-based URI, as defined in the DRS documentation, that tells clients how to access this object. The intent of this field is to make DRS objects self-contained, and therefore easier for clients to store and pass around. For example, if you arrive at this DRS JSON by resolving a compact identifier-based DRS URI, the `self_uri` presents you with a hostname and properly encoded DRS ID for use in subsequent `access` endpoint calls.</td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; - fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment"]; - fhir:StructureDefinition.version [ fhir:value "0.2.0"]; - fhir:StructureDefinition.name [ fhir:value "DRSAttachment"]; - fhir:StructureDefinition.title [ fhir:value "DRS Attachment"]; - fhir:StructureDefinition.status [ fhir:value "draft"]; - fhir:StructureDefinition.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment"]; # + fhir:StructureDefinition.version [ fhir:value "0.2.0"]; # + fhir:StructureDefinition.name [ fhir:value "DRSAttachment"]; # + fhir:StructureDefinition.title [ fhir:value "DRS Attachment"]; # + fhir:StructureDefinition.status [ fhir:value "draft"]; # + fhir:StructureDefinition.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:StructureDefinition.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -36,9 +36,9 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:StructureDefinition.description [ fhir:value "A FHIR Attachment with a DRS url."]; - fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; + ]; # + fhir:StructureDefinition.description [ fhir:value "A FHIR Attachment with a DRS url."]; # + fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; # fhir:StructureDefinition.mapping [ fhir:index 0; fhir:StructureDefinition.mapping.identity [ fhir:value "v2" ]; @@ -49,15 +49,15 @@ fhir:StructureDefinition.mapping.identity [ fhir:value "rim" ]; fhir:StructureDefinition.mapping.uri [ fhir:value "http://hl7.org/v3" ]; fhir:StructureDefinition.mapping.name [ fhir:value "RIM Mapping" ] - ]; - fhir:StructureDefinition.kind [ fhir:value "complex-type"]; - fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; - fhir:StructureDefinition.type [ fhir:value "Attachment"]; + ]; # + fhir:StructureDefinition.kind [ fhir:value "complex-type"]; # + fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; # + fhir:StructureDefinition.type [ fhir:value "Attachment"]; # fhir:StructureDefinition.baseDefinition [ fhir:value "http://hl7.org/fhir/StructureDefinition/Attachment"; fhir:link <http://hl7.org/fhir/StructureDefinition/Attachment> - ]; - fhir:StructureDefinition.derivation [ fhir:value "constraint"]; + ]; # + fhir:StructureDefinition.derivation [ fhir:value "constraint"]; # fhir:StructureDefinition.snapshot [ fhir:StructureDefinition.snapshot.element [ fhir:index 0; @@ -600,7 +600,7 @@ fhir:ElementDefinition.mapping.map [ fhir:value "N/A (needs data type R3 proposal)" ] ] ] - ]; + ]; # fhir:StructureDefinition.differential [ fhir:StructureDefinition.differential.element [ fhir:index 0; @@ -618,7 +618,7 @@ ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/StructureDefinition-ncpi-drs-attachment.xlsx b/StructureDefinition-ncpi-drs-attachment.xlsx index 0de58d3c..b5ac97d0 100644 Binary files a/StructureDefinition-ncpi-drs-attachment.xlsx and b/StructureDefinition-ncpi-drs-attachment.xlsx differ diff --git a/StructureDefinition-ncpi-drs-attachment.xml b/StructureDefinition-ncpi-drs-attachment.xml index e6ddfc66..8583f525 100644 --- a/StructureDefinition-ncpi-drs-attachment.xml +++ b/StructureDefinition-ncpi-drs-attachment.xml @@ -11,7 +11,7 @@ <name value="DRSAttachment"/> <title value="DRS Attachment"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/StructureDefinition-ncpi-drs-document-reference-definitions.html b/StructureDefinition-ncpi-drs-document-reference-definitions.html index 62eb426b..b14f7504 100644 --- a/StructureDefinition-ncpi-drs-document-reference-definitions.html +++ b/StructureDefinition-ncpi-drs-document-reference-definitions.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -327,7 +327,8 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 </ul> <a name="tabs-diff"> </a> <div id="tabs-diff"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_DocumentReference"> </a><span style="color: grey">1.</span> <b>DocumentReference</b><a href="#diff_DocumentReference" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_DocumentReference.content"> </a><span style="color: grey">2.</span> <b>DocumentReference.content</b><a href="#diff_DocumentReference.content" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..?</td></tr> @@ -338,7 +339,8 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 </div> <a name="tabs-key"> </a> <div id="tabs-key"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="key_DocumentReference"> </a><span style="color: grey">1.</span> <b>DocumentReference</b><a href="#key_DocumentReference" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><span style='color:DarkGray'><p>A reference to a document of any kind for any purpose. Provides metadata about the document so that the document can be discovered and managed. The scope of a document is any seralized object with a mime-type, so includes formal patient centric documents (CDA), cliical notes, scanned paper, and non-patient specific documents like policy text.</p> </span></td></tr> @@ -420,7 +422,8 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 </div> <a name="tabs-snap"> </a> <div id="tabs-snap"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="DocumentReference"> </a><span style="color: grey">1.</span> <b>DocumentReference</b><a href="#DocumentReference" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>A reference to a document of any kind for any purpose. Provides metadata about the document so that the document can be discovered and managed. The scope of a document is any seralized object with a mime-type, so includes formal patient centric documents (CDA), cliical notes, scanned paper, and non-patient specific documents like policy text.</p> </td></tr> @@ -468,7 +471,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#Narrative">Narrative</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrativehtmlxhtmldisplay</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrative, html, xhtml, display</td></tr> <tr><td>Comments</td><td><p>Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a "text blob" or where text is additionally entered raw or narrated and encoded information is added later.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -478,7 +481,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/resource.html">Resource</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resourcesanonymous resourcescontained resources</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resources, anonymous resources, contained resources</td></tr> <tr><td>Comments</td><td><p>This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="DocumentReference.extension"> </a><span style="color: grey">8.</span> <b>DocumentReference.extension</b><a href="#DocumentReference.extension" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -486,7 +489,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -500,7 +503,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -579,7 +582,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 <tr><td>Definition</td><td><p>Who or what the document is about. The document can be about a person, (patient or healthcare practitioner), a device (e.g. a machine) or even a group of subjects (such as a document about a herd of farm animals, or a set of patients that share a common exposure).</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a><a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a>|<a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a>|<a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="DocumentReference.date"> </a><span style="color: grey">17.</span> <b>DocumentReference.date</b><a href="#DocumentReference.date" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -596,7 +599,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 <tr><td>Definition</td><td><p>Identifies who is responsible for adding the information to the document.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a><a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a><a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a>|<a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a>|<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>|<a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a>|<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>)</td></tr> <tr><td>Comments</td><td><p>Not necessarily who did the actual data entry (i.e. typist) or who was the source (informant).</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -605,7 +608,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 <tr><td>Definition</td><td><p>Which person or organization authenticates that this document is valid.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a><a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a>|<a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a>|<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>)</td></tr> <tr><td>Comments</td><td><p>Represents a participant within the author institution who has legally authenticated or attested the document. Legal authentication implies that a document has been signed manually or electronically by the legal Authenticator.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -614,7 +617,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 <tr><td>Definition</td><td><p>Identifies the organization or group who is responsible for ongoing maintenance of and access to the document.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>)</td></tr> <tr><td>Comments</td><td><p>Identifies the logical organization (software system, vendor, or department) to go to find the current version, where to report issues, etc. This is different from the physical location (URL, disk drive, or server) of the document, which is the technical location of the document, which host may be delegated to the management of some other organization.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -639,7 +642,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -653,7 +656,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -674,7 +677,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 <tr><td>Definition</td><td><p>The target document of this relationship.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/documentreference.html" title="http://hl7.org/fhir/StructureDefinition/DocumentReference">DocumentReference</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/documentreference.html" title="http://hl7.org/fhir/StructureDefinition/DocumentReference">DocumentReference</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="DocumentReference.description"> </a><span style="color: grey">27.</span> <b>DocumentReference.description</b><a href="#DocumentReference.description" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -721,7 +724,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -735,7 +738,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -781,7 +784,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -795,7 +798,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -804,7 +807,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 <tr><td>Definition</td><td><p>Describes the clinical encounter or type of care that the document content is associated with.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html" title="http://hl7.org/fhir/StructureDefinition/Encounter">Encounter</a><a href="http://hl7.org/fhir/R4/episodeofcare.html" title="http://hl7.org/fhir/StructureDefinition/EpisodeOfCare">EpisodeOfCare</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html" title="http://hl7.org/fhir/StructureDefinition/Encounter">Encounter</a>|<a href="http://hl7.org/fhir/R4/episodeofcare.html" title="http://hl7.org/fhir/StructureDefinition/EpisodeOfCare">EpisodeOfCare</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="DocumentReference.context.event"> </a><span style="color: grey">40.</span> <b>DocumentReference.context.event</b><a href="#DocumentReference.context.event" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -854,14 +857,14 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 <tr><td>Definition</td><td><p>The Patient Information as known when the document was published. May be a reference to a version specific, or contained.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="DocumentReference.context.related"> </a><span style="color: grey">45.</span> <b>DocumentReference.context.related</b><a href="#DocumentReference.context.related" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>Related identifiers or resources associated with the DocumentReference.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>)</td></tr> <tr><td>Comments</td><td><p>May be identifiers or resources that caused the DocumentReference or referenced Document to be created.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -922,7 +925,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Detailed Descriptions</h2 <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-drs-document-reference-examples.html b/StructureDefinition-ncpi-drs-document-reference-examples.html index 65bc9338..ee7c30bf 100644 --- a/StructureDefinition-ncpi-drs-document-reference-examples.html +++ b/StructureDefinition-ncpi-drs-document-reference-examples.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Examples</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -378,7 +378,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Examples</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-drs-document-reference-mappings.html b/StructureDefinition-ncpi-drs-document-reference-mappings.html index 8f706cdd..62ebbf37 100644 --- a/StructureDefinition-ncpi-drs-document-reference-mappings.html +++ b/StructureDefinition-ncpi-drs-document-reference-mappings.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Mappings</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -534,7 +534,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Mappings</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-drs-document-reference-testing.html b/StructureDefinition-ncpi-drs-document-reference-testing.html index d9d4a3e2..ea533530 100644 --- a/StructureDefinition-ncpi-drs-document-reference-testing.html +++ b/StructureDefinition-ncpi-drs-document-reference-testing.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Testing</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -362,7 +362,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Testing</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-drs-document-reference.html b/StructureDefinition-ncpi-drs-document-reference.html index 042e7dd3..b8c9969f 100644 --- a/StructureDefinition-ncpi-drs-document-reference.html +++ b/StructureDefinition-ncpi-drs-document-reference.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -321,7 +321,7 @@ <h2 id="root">Resource Profile: Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -1008,7 +1008,7 @@ <h4>Constraints</h4> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-drs-document-reference.json b/StructureDefinition-ncpi-drs-document-reference.json index 95908c49..78e83dff 100644 --- a/StructureDefinition-ncpi-drs-document-reference.json +++ b/StructureDefinition-ncpi-drs-document-reference.json @@ -1,2453 +1,2103 @@ -{ - "resourceType": "StructureDefinition", - "id": "ncpi-drs-document-reference", - "text": { - "status": "extensions", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-drs-document-reference-definitions.html#DocumentReference\">DocumentReference</a><a name=\"DocumentReference\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/documentreference.html\">DocumentReference</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">A reference to a document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck01.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-drs-document-reference-definitions.html#DocumentReference.content\">content</a><a name=\"DocumentReference.content\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_datatype.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Data Type\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-drs-document-reference-definitions.html#DocumentReference.content.attachment\">attachment</a><a name=\"DocumentReference.content.attachment\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"StructureDefinition-ncpi-drs-attachment.html\" title=\"Attachment\">DRSAttachment</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Content in a format defined elsewhere</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - }, - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", - "valueString": "Foundation.Documents" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", - "valueCode": "not-classified" - } - ], - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-document-reference", - "version": "0.2.0", - "name": "DRSDocumentReference", - "title": "DRS Document Reference", - "status": "draft", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "A FHIR Document Reference with an embedded DRS URI. See https://github.com/ga4gh/data-repository-service-schemas.", - "fhirVersion": "4.0.1", - "mapping": [ - { - "identity": "workflow", - "uri": "http://hl7.org/fhir/workflow", - "name": "Workflow Pattern" - }, - { - "identity": "fhircomposition", - "uri": "http://hl7.org/fhir/composition", - "name": "FHIR Composition" - }, - { - "identity": "rim", - "uri": "http://hl7.org/v3", - "name": "RIM Mapping" - }, - { - "identity": "cda", - "uri": "http://hl7.org/v3/cda", - "name": "CDA (R2)" - }, - { - "identity": "w5", - "uri": "http://hl7.org/fhir/fivews", - "name": "FiveWs Pattern Mapping" - }, - { - "identity": "v2", - "uri": "http://hl7.org/v2", - "name": "HL7 v2 Mapping" - }, - { - "identity": "xds", - "uri": "http://ihe.net/xds", - "name": "XDS metadata equivalent" - } - ], - "kind": "resource", - "abstract": false, - "type": "DocumentReference", - "baseDefinition": "http://hl7.org/fhir/StructureDefinition/DocumentReference", - "derivation": "constraint", - "snapshot": { - "element": [ - { - "id": "DocumentReference", - "path": "DocumentReference", - "short": "A reference to a document", - "definition": "A reference to a document of any kind for any purpose. Provides metadata about the document so that the document can be discovered and managed. The scope of a document is any seralized object with a mime-type, so includes formal patient centric documents (CDA), cliical notes, scanned paper, and non-patient specific documents like policy text.", - "comment": "Usually, this is used for documents other than those defined by FHIR.", - "min": 0, - "max": "*", - "base": { - "path": "DocumentReference", - "min": 0, - "max": "*" - }, - "constraint": [ - { - "key": "dom-2", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL NOT contain nested Resources", - "expression": "contained.contained.empty()", - "xpath": "not(parent::f:contained and f:contained)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-3", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", - "expression": "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", - "xpath": "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-4", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", - "expression": "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-5", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a security label", - "expression": "contained.meta.security.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:security))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", - "valueBoolean": true - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", - "valueMarkdown": "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." - } - ], - "key": "dom-6", - "severity": "warning", - "human": "A resource should have narrative for robust management", - "expression": "text.`div`.exists()", - "xpath": "exists(f:text/h:div)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Entity. Role, or Act" - }, - { - "identity": "workflow", - "map": "Event" - }, - { - "identity": "fhircomposition", - "map": "when describing a Composition" - }, - { - "identity": "rim", - "map": "Document[classCode=\"DOC\" and moodCode=\"EVN\"]" - }, - { - "identity": "cda", - "map": "when describing a CDA" - } - ] - }, - { - "id": "DocumentReference.id", - "path": "DocumentReference.id", - "short": "Logical id of this artifact", - "definition": "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", - "comment": "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "id" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "DocumentReference.meta", - "path": "DocumentReference.meta", - "short": "Metadata about the resource", - "definition": "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.meta", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Meta" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "DocumentReference.implicitRules", - "path": "DocumentReference.implicitRules", - "short": "A set of rules under which this content was created", - "definition": "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", - "comment": "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.implicitRules", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", - "isSummary": true - }, - { - "id": "DocumentReference.language", - "path": "DocumentReference.language", - "short": "Language of the resource content", - "definition": "The base language in which the resource is written.", - "comment": "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", - "min": 0, - "max": "1", - "base": { - "path": "Resource.language", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", - "valueCanonical": "http://hl7.org/fhir/ValueSet/all-languages" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "Language" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "preferred", - "description": "A human language.", - "valueSet": "http://hl7.org/fhir/ValueSet/languages" - } - }, - { - "id": "DocumentReference.text", - "path": "DocumentReference.text", - "short": "Text summary of the resource, for human interpretation", - "definition": "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", - "comment": "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", - "alias": [ - "narrative", - "html", - "xhtml", - "display" - ], - "min": 0, - "max": "1", - "base": { - "path": "DomainResource.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Narrative" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Act.text?" - } - ] - }, - { - "id": "DocumentReference.contained", - "path": "DocumentReference.contained", - "short": "Contained, inline Resources", - "definition": "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", - "comment": "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", - "alias": [ - "inline resources", - "anonymous resources", - "contained resources" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.contained", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Resource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "DocumentReference.extension", - "path": "DocumentReference.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "DocumentReference.modifierExtension", - "path": "DocumentReference.modifierExtension", - "short": "Extensions that cannot be ignored", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "DocumentReference.masterIdentifier", - "path": "DocumentReference.masterIdentifier", - "short": "Master Version Specific Identifier", - "definition": "Document identifier as assigned by the source of the document. This identifier is specific to this version of the document. This unique identifier may be used elsewhere to identify this version of the document.", - "comment": "CDA Document Id extension and root.", - "requirements": "The structure and format of this Id shall be consistent with the specification corresponding to the formatCode attribute. (e.g. for a DICOM standard document a 64-character numeric UID, for an HL7 CDA format a serialization of the CDA Document Id extension and root in the form \"oid^extension\", where OID is a 64 digits max, and the Id is a 16 UTF-8 char max. If the OID is coded without the extension then the '^' character shall not be included.).", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.masterIdentifier", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Identifier" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.identifier" - }, - { - "identity": "w5", - "map": "FiveWs.identifier" - }, - { - "identity": "fhircomposition", - "map": "Composition.identifier" - }, - { - "identity": "v2", - "map": "TXA-12" - }, - { - "identity": "rim", - "map": ".id" - }, - { - "identity": "xds", - "map": "DocumentEntry.uniqueId" - }, - { - "identity": "cda", - "map": "ClinicalDocument/id" - } - ] - }, - { - "id": "DocumentReference.identifier", - "path": "DocumentReference.identifier", - "short": "Other identifiers for the document", - "definition": "Other identifiers associated with the document, including version independent identifiers.", - "min": 0, - "max": "*", - "base": { - "path": "DocumentReference.identifier", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Identifier" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.identifier" - }, - { - "identity": "w5", - "map": "FiveWs.identifier" - }, - { - "identity": "v2", - "map": "TXA-16?" - }, - { - "identity": "rim", - "map": ".id / .setId" - }, - { - "identity": "xds", - "map": "DocumentEntry.entryUUID" - } - ] - }, - { - "id": "DocumentReference.status", - "path": "DocumentReference.status", - "short": "current | superseded | entered-in-error", - "definition": "The status of this document reference.", - "comment": "This is the status of the DocumentReference object, which might be independent from the docStatus element.\n\nThis element is labeled as a modifier because the status contains the codes that mark the document or reference as not currently valid.", - "min": 1, - "max": "1", - "base": { - "path": "DocumentReference.status", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labelled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid", - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "DocumentReferenceStatus" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "required", - "description": "The status of the document reference.", - "valueSet": "http://hl7.org/fhir/ValueSet/document-reference-status|4.0.1" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.status" - }, - { - "identity": "w5", - "map": "FiveWs.status" - }, - { - "identity": "v2", - "map": "TXA-19" - }, - { - "identity": "rim", - "map": "interim: .completionCode=\"IN\" & ./statusCode[isNormalDatatype()]=\"active\"; final: .completionCode=\"AU\" && ./statusCode[isNormalDatatype()]=\"complete\" and not(./inboundRelationship[typeCode=\"SUBJ\" and isNormalActRelationship()]/source[subsumesCode(\"ActClass#CACT\") and moodCode=\"EVN\" and domainMember(\"ReviseDocument\", code) and isNormalAct()]); amended: .completionCode=\"AU\" && ./statusCode[isNormalDatatype()]=\"complete\" and ./inboundRelationship[typeCode=\"SUBJ\" and isNormalActRelationship()]/source[subsumesCode(\"ActClass#CACT\") and moodCode=\"EVN\" and domainMember(\"ReviseDocument\", code) and isNormalAct() and statusCode=\"completed\"]; withdrawn : .completionCode=NI && ./statusCode[isNormalDatatype()]=\"obsolete\"" - }, - { - "identity": "xds", - "map": "DocumentEntry.availabilityStatus" - } - ] - }, - { - "id": "DocumentReference.docStatus", - "path": "DocumentReference.docStatus", - "short": "preliminary | final | amended | entered-in-error", - "definition": "The status of the underlying document.", - "comment": "The document that is pointed to might be in various lifecycle states.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.docStatus", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ReferredDocumentStatus" - } - ], - "strength": "required", - "description": "Status of the underlying document.", - "valueSet": "http://hl7.org/fhir/ValueSet/composition-status|4.0.1" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.status" - }, - { - "identity": "fhircomposition", - "map": "Composition.status" - }, - { - "identity": "v2", - "map": "TXA-17" - }, - { - "identity": "rim", - "map": ".statusCode" - } - ] - }, - { - "id": "DocumentReference.type", - "path": "DocumentReference.type", - "short": "Kind of document (LOINC if possible)", - "definition": "Specifies the particular kind of document referenced (e.g. History and Physical, Discharge Summary, Progress Note). This usually equates to the purpose of making the document referenced.", - "comment": "Key metadata element describing the document that describes he exact type of document. Helps humans to assess whether the document is of interest when viewing a list of documents.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.type", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "DocumentC80Type" - } - ], - "strength": "preferred", - "description": "Precise type of clinical document.", - "valueSet": "http://hl7.org/fhir/ValueSet/c80-doc-typecodes" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.code" - }, - { - "identity": "w5", - "map": "FiveWs.class" - }, - { - "identity": "fhircomposition", - "map": "Composition.type" - }, - { - "identity": "v2", - "map": "TXA-2" - }, - { - "identity": "rim", - "map": "./code" - }, - { - "identity": "xds", - "map": "DocumentEntry.type" - }, - { - "identity": "cda", - "map": "ClinicalDocument/code/@code \n\nThe typeCode should be mapped from the ClinicalDocument/code element to a set of document type codes configured in the affinity domain. One suggested coding system to use for typeCode is LOINC, in which case the mapping step can be omitted." - } - ] - }, - { - "id": "DocumentReference.category", - "path": "DocumentReference.category", - "short": "Categorization of document", - "definition": "A categorization for the type of document referenced - helps for indexing and searching. This may be implied by or derived from the code specified in the DocumentReference.type.", - "comment": "Key metadata element describing the the category or classification of the document. This is a broader perspective that groups similar documents based on how they would be used. This is a primary key used in searching.", - "alias": [ - "claxs" - ], - "min": 0, - "max": "*", - "base": { - "path": "DocumentReference.category", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "DocumentC80Class" - } - ], - "strength": "example", - "description": "High-level kind of a clinical document at a macro level.", - "valueSet": "http://hl7.org/fhir/ValueSet/document-classcodes" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.class" - }, - { - "identity": "fhircomposition", - "map": "Composition.class" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=\"COMP].target[classCode=\"LIST\", moodCode=\"EVN\"].code" - }, - { - "identity": "xds", - "map": "DocumentEntry.class" - }, - { - "identity": "cda", - "map": "Derived from a mapping of /ClinicalDocument/code/@code to an Affinity Domain specified coded value to use and coding system. Affinity Domains are encouraged to use the appropriate value for Type of Service, based on the LOINC Type of Service (see Page 53 of the LOINC User's Manual). Must be consistent with /ClinicalDocument/code/@code" - } - ] - }, - { - "id": "DocumentReference.subject", - "path": "DocumentReference.subject", - "short": "Who/what is the subject of the document", - "definition": "Who or what the document is about. The document can be about a person, (patient or healthcare practitioner), a device (e.g. a machine) or even a group of subjects (such as a document about a herd of farm animals, or a set of patients that share a common exposure).", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.subject", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Patient", - "http://hl7.org/fhir/StructureDefinition/Practitioner", - "http://hl7.org/fhir/StructureDefinition/Group", - "http://hl7.org/fhir/StructureDefinition/Device" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.subject" - }, - { - "identity": "w5", - "map": "FiveWs.subject[x]" - }, - { - "identity": "fhircomposition", - "map": "Composition.subject" - }, - { - "identity": "v2", - "map": "PID-3 (No standard way to define a Practitioner or Group subject in HL7 v2 MDM message)" - }, - { - "identity": "rim", - "map": ".participation[typeCode=\"SBJ\"].role[typeCode=\"PAT\"]" - }, - { - "identity": "xds", - "map": "DocumentEntry.patientId" - }, - { - "identity": "cda", - "map": "ClinicalDocument/recordTarget/" - }, - { - "identity": "w5", - "map": "FiveWs.subject" - } - ] - }, - { - "id": "DocumentReference.date", - "path": "DocumentReference.date", - "short": "When this document reference was created", - "definition": "When the document reference was created.", - "comment": "Referencing/indexing time is used for tracking, organizing versions and searching.", - "alias": [ - "indexed" - ], - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.date", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "instant" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.occurrence[x]" - }, - { - "identity": "w5", - "map": "FiveWs.recorded" - }, - { - "identity": "fhircomposition", - "map": "Composition.date" - }, - { - "identity": "rim", - "map": ".availabilityTime[type=\"TS\"]" - } - ] - }, - { - "id": "DocumentReference.author", - "path": "DocumentReference.author", - "short": "Who and/or what authored the document", - "definition": "Identifies who is responsible for adding the information to the document.", - "comment": "Not necessarily who did the actual data entry (i.e. typist) or who was the source (informant).", - "min": 0, - "max": "*", - "base": { - "path": "DocumentReference.author", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Practitioner", - "http://hl7.org/fhir/StructureDefinition/PractitionerRole", - "http://hl7.org/fhir/StructureDefinition/Organization", - "http://hl7.org/fhir/StructureDefinition/Device", - "http://hl7.org/fhir/StructureDefinition/Patient", - "http://hl7.org/fhir/StructureDefinition/RelatedPerson" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.performer.actor" - }, - { - "identity": "fhircomposition", - "map": "Composition.author" - }, - { - "identity": "v2", - "map": "TXA-9 (No standard way to indicate a Device in HL7 v2 MDM message)" - }, - { - "identity": "rim", - "map": ".participation[typeCode=\"AUT\"].role[classCode=\"ASSIGNED\"]" - }, - { - "identity": "xds", - "map": "DocumentEntry.author" - }, - { - "identity": "cda", - "map": "ClinicalDocument/author" - } - ] - }, - { - "id": "DocumentReference.authenticator", - "path": "DocumentReference.authenticator", - "short": "Who/what authenticated the document", - "definition": "Which person or organization authenticates that this document is valid.", - "comment": "Represents a participant within the author institution who has legally authenticated or attested the document. Legal authentication implies that a document has been signed manually or electronically by the legal Authenticator.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.authenticator", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Practitioner", - "http://hl7.org/fhir/StructureDefinition/PractitionerRole", - "http://hl7.org/fhir/StructureDefinition/Organization" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Event.performer.actor" - }, - { - "identity": "w5", - "map": "FiveWs.witness" - }, - { - "identity": "fhircomposition", - "map": "Composition.attester" - }, - { - "identity": "v2", - "map": "TXA-10" - }, - { - "identity": "rim", - "map": ".participation[typeCode=\"AUTHEN\"].role[classCode=\"ASSIGNED\"]" - }, - { - "identity": "xds", - "map": "DocumentEntry.legalAuthenticator" - }, - { - "identity": "cda", - "map": "ClinicalDocument/legalAuthenticator" - } - ] - }, - { - "id": "DocumentReference.custodian", - "path": "DocumentReference.custodian", - "short": "Organization which maintains the document", - "definition": "Identifies the organization or group who is responsible for ongoing maintenance of and access to the document.", - "comment": "Identifies the logical organization (software system, vendor, or department) to go to find the current version, where to report issues, etc. This is different from the physical location (URL, disk drive, or server) of the document, which is the technical location of the document, which host may be delegated to the management of some other organization.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.custodian", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Organization" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Event.performer.actor" - }, - { - "identity": "fhircomposition", - "map": "Composition.custodian" - }, - { - "identity": "rim", - "map": ".participation[typeCode=\"RCV\"].role[classCode=\"CUST\"].scoper[classCode=\"ORG\" and determinerCode=\"INST\"]" - } - ] - }, - { - "id": "DocumentReference.relatesTo", - "path": "DocumentReference.relatesTo", - "short": "Relationships to other documents", - "definition": "Relationships that this document has with other document references that already exist.", - "comment": "This element is labeled as a modifier because documents that append to other documents are incomplete on their own.", - "min": 0, - "max": "*", - "base": { - "path": "DocumentReference.relatesTo", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Composition.relatesTo" - }, - { - "identity": "rim", - "map": ".outboundRelationship" - }, - { - "identity": "xds", - "map": "DocumentEntry Associations" - } - ] - }, - { - "id": "DocumentReference.relatesTo.id", - "path": "DocumentReference.relatesTo.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "DocumentReference.relatesTo.extension", - "path": "DocumentReference.relatesTo.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "DocumentReference.relatesTo.modifierExtension", - "path": "DocumentReference.relatesTo.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "DocumentReference.relatesTo.code", - "path": "DocumentReference.relatesTo.code", - "short": "replaces | transforms | signs | appends", - "definition": "The type of relationship that this document has with anther document.", - "comment": "If this document appends another document, then the document cannot be fully understood without also accessing the referenced document.", - "min": 1, - "max": "1", - "base": { - "path": "DocumentReference.relatesTo.code", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "DocumentRelationshipType" - } - ], - "strength": "required", - "description": "The type of relationship between documents.", - "valueSet": "http://hl7.org/fhir/ValueSet/document-relationship-type|4.0.1" - }, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Composition.relatesTo.code" - }, - { - "identity": "rim", - "map": ".outboundRelationship.typeCode" - }, - { - "identity": "xds", - "map": "DocumentEntry Associations type" - } - ] - }, - { - "id": "DocumentReference.relatesTo.target", - "path": "DocumentReference.relatesTo.target", - "short": "Target of the relationship", - "definition": "The target document of this relationship.", - "min": 1, - "max": "1", - "base": { - "path": "DocumentReference.relatesTo.target", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/DocumentReference" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Composition.relatesTo.target" - }, - { - "identity": "rim", - "map": ".target[classCode=\"DOC\", moodCode=\"EVN\"].id" - }, - { - "identity": "xds", - "map": "DocumentEntry Associations reference" - } - ] - }, - { - "id": "DocumentReference.description", - "path": "DocumentReference.description", - "short": "Human-readable description", - "definition": "Human-readable description of the source document.", - "comment": "What the document is about, a terse summary of the document.", - "requirements": "Helps humans to assess whether the document is of interest.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.description", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "TXA-25" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=\"SUBJ\"].target.text" - }, - { - "identity": "xds", - "map": "DocumentEntry.comments" - } - ] - }, - { - "id": "DocumentReference.securityLabel", - "path": "DocumentReference.securityLabel", - "short": "Document security-tags", - "definition": "A set of Security-Tag codes specifying the level of privacy/security of the Document. Note that DocumentReference.meta.security contains the security labels of the \"reference\" to the document, while DocumentReference.securityLabel contains a snapshot of the security labels on the document the reference refers to.", - "comment": "The confidentiality codes can carry multiple vocabulary items. HL7 has developed an understanding of security and privacy tags that might be desirable in a Document Sharing environment, called HL7 Healthcare Privacy and Security Classification System (HCS). The following specification is recommended but not mandated, as the vocabulary bindings are an administrative domain responsibility. The use of this method is up to the policy domain such as the XDS Affinity Domain or other Trust Domain where all parties including sender and recipients are trusted to appropriately tag and enforce. \n\nIn the HL7 Healthcare Privacy and Security Classification (HCS) there are code systems specific to Confidentiality, Sensitivity, Integrity, and Handling Caveats. Some values would come from a local vocabulary as they are related to workflow roles and special projects.", - "requirements": "Use of the Health Care Privacy/Security Classification (HCS) system of security-tag use is recommended.", - "min": 0, - "max": "*", - "base": { - "path": "DocumentReference.securityLabel", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "SecurityLabels" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "extensible", - "description": "Security Labels from the Healthcare Privacy and Security Classification System.", - "valueSet": "http://hl7.org/fhir/ValueSet/security-labels" - }, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Composition.confidentiality, Composition.meta.security" - }, - { - "identity": "v2", - "map": "TXA-18" - }, - { - "identity": "rim", - "map": ".confidentialityCode" - }, - { - "identity": "xds", - "map": "DocumentEntry.confidentialityCode" - }, - { - "identity": "cda", - "map": "ClinicalDocument/confidentialityCode/@code" - } - ] - }, - { - "id": "DocumentReference.content", - "path": "DocumentReference.content", - "short": "Document referenced", - "definition": "The document and format referenced. There may be multiple content element repetitions, each with a different format.", - "min": 1, - "max": "*", - "base": { - "path": "DocumentReference.content", - "min": 1, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Bundle(Composition+*)" - }, - { - "identity": "rim", - "map": "document.text" - } - ] - }, - { - "id": "DocumentReference.content.id", - "path": "DocumentReference.content.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "DocumentReference.content.extension", - "path": "DocumentReference.content.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "DocumentReference.content.modifierExtension", - "path": "DocumentReference.content.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "DocumentReference.content.attachment", - "path": "DocumentReference.content.attachment", - "short": "Content in a format defined elsewhere", - "definition": "For referring to data content defined in other formats.", - "comment": "When providing a summary view (for example with Observation.value[x]) Attachment should be represented with a brief display text such as \"Signed Procedure Consent\".", - "min": 1, - "max": "1", - "base": { - "path": "DocumentReference.content.attachment", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "Attachment", - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment" - ] - } - ], - "condition": [ - "ele-1" - ], - "constraint": [ - { - "key": "att-1", - "severity": "error", - "human": "If the Attachment has data, it SHALL have a contentType", - "expression": "data.empty() or contentType.exists()", - "xpath": "not(exists(f:data)) or exists(f:contentType)", - "source": "http://hl7.org/fhir/StructureDefinition/Attachment" - }, - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "must-be-drs-uri", - "severity": "error", - "human": "attachment.url must start with ^drs://. A drs:// hostname-based URI, as defined in the DRS documentation, that tells clients how to access this object. The intent of this field is to make DRS objects self-contained, and therefore easier for clients to store and pass around. For example, if you arrive at this DRS JSON by resolving a compact identifier-based DRS URI, the `self_uri` presents you with a hostname and properly encoded DRS ID for use in subsequent `access` endpoint calls.", - "expression": "$this.url.matches('^drs://.*')", - "source": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment" - } - ], - "isModifier": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - }, - { - "identity": "v2", - "map": "ED/RP" - }, - { - "identity": "rim", - "map": "ED" - } - ] - }, - { - "id": "DocumentReference.content.format", - "path": "DocumentReference.content.format", - "short": "Format/content rules for the document", - "definition": "An identifier of the document encoding, structure, and template that the document conforms to beyond the base format indicated in the mimeType.", - "comment": "Note that while IHE mostly issues URNs for format types, not all documents can be identified by a URI.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.content.format", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Coding" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "DocumentFormat" - } - ], - "strength": "preferred", - "description": "Document Format Codes.", - "valueSet": "http://hl7.org/fhir/ValueSet/formatcodes" - }, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Composition.meta.profile" - }, - { - "identity": "rim", - "map": "document.text" - }, - { - "identity": "xds", - "map": "DocumentEntry.formatCode" - }, - { - "identity": "cda", - "map": "derived from the IHE Profile or Implementation Guide templateID" - } - ] - }, - { - "id": "DocumentReference.context", - "path": "DocumentReference.context", - "short": "Clinical context of document", - "definition": "The clinical context in which the document was prepared.", - "comment": "These values are primarily added to help with searching for interesting/relevant documents.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.context", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "outboundRelationship[typeCode=\"SUBJ\"].target[classCode<'ACT']" - } - ] - }, - { - "id": "DocumentReference.context.id", - "path": "DocumentReference.context.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "DocumentReference.context.extension", - "path": "DocumentReference.context.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "DocumentReference.context.modifierExtension", - "path": "DocumentReference.context.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "DocumentReference.context.encounter", - "path": "DocumentReference.context.encounter", - "short": "Context of the document content", - "definition": "Describes the clinical encounter or type of care that the document content is associated with.", - "min": 0, - "max": "*", - "base": { - "path": "DocumentReference.context.encounter", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Encounter", - "http://hl7.org/fhir/StructureDefinition/EpisodeOfCare" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Event.context" - }, - { - "identity": "w5", - "map": "FiveWs.context" - }, - { - "identity": "fhircomposition", - "map": "Composition.encounter" - }, - { - "identity": "rim", - "map": "unique(highest(./outboundRelationship[typeCode=\"SUBJ\" and isNormalActRelationship()], priorityNumber)/target[moodCode=\"EVN\" and classCode=(\"ENC\", \"PCPR\") and isNormalAct])" - } - ] - }, - { - "id": "DocumentReference.context.event", - "path": "DocumentReference.context.event", - "short": "Main clinical acts documented", - "definition": "This list of codes represents the main clinical acts, such as a colonoscopy or an appendectomy, being documented. In some cases, the event is inherent in the type Code, such as a \"History and Physical Report\" in which the procedure being documented is necessarily a \"History and Physical\" act.", - "comment": "An event can further specialize the act inherent in the type, such as where it is simply \"Procedure Report\" and the procedure was a \"colonoscopy\". If one or more event codes are included, they shall not conflict with the values inherent in the class or type elements as such a conflict would create an ambiguous situation.", - "min": 0, - "max": "*", - "base": { - "path": "DocumentReference.context.event", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "DocumentEventType" - } - ], - "strength": "example", - "description": "This list of codes represents the main clinical acts being documented.", - "valueSet": "http://terminology.hl7.org/ValueSet/v3-ActCode" - }, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Composition.event.code" - }, - { - "identity": "rim", - "map": ".code" - }, - { - "identity": "xds", - "map": "DocumentEntry.eventCodeList" - } - ] - }, - { - "id": "DocumentReference.context.period", - "path": "DocumentReference.context.period", - "short": "Time of service that is being documented", - "definition": "The time period over which the service that is described by the document was provided.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.context.period", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Period" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Composition.event.period" - }, - { - "identity": "rim", - "map": ".effectiveTime" - }, - { - "identity": "xds", - "map": "DocumentEntry.serviceStartTime, DocumentEntry.serviceStopTime" - }, - { - "identity": "cda", - "map": "ClinicalDocument/documentationOf/\nserviceEvent/effectiveTime/low/\n@value --> ClinicalDocument/documentationOf/\nserviceEvent/effectiveTime/high/\n@value" - } - ] - }, - { - "id": "DocumentReference.context.facilityType", - "path": "DocumentReference.context.facilityType", - "short": "Kind of facility where patient was seen", - "definition": "The kind of facility where the patient was seen.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.context.facilityType", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "DocumentC80FacilityType" - } - ], - "strength": "example", - "description": "XDS Facility Type.", - "valueSet": "http://hl7.org/fhir/ValueSet/c80-facilitycodes" - }, - "mapping": [ - { - "identity": "fhircomposition", - "map": "usually from a mapping to a local ValueSet" - }, - { - "identity": "rim", - "map": ".participation[typeCode=\"LOC\"].role[classCode=\"DSDLOC\"].code" - }, - { - "identity": "xds", - "map": "DocumentEntry.healthcareFacilityTypeCode" - }, - { - "identity": "cda", - "map": "usually a mapping to a local ValueSet. Must be consistent with /clinicalDocument/code" - } - ] - }, - { - "id": "DocumentReference.context.practiceSetting", - "path": "DocumentReference.context.practiceSetting", - "short": "Additional details about where the content was created (e.g. clinical specialty)", - "definition": "This property may convey specifics about the practice setting where the content was created, often reflecting the clinical specialty.", - "comment": "This element should be based on a coarse classification system for the class of specialty practice. Recommend the use of the classification system for Practice Setting, such as that described by the Subject Matter Domain in LOINC.", - "requirements": "This is an important piece of metadata that providers often rely upon to quickly sort and/or filter out to find specific content.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.context.practiceSetting", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "DocumentC80PracticeSetting" - } - ], - "strength": "example", - "description": "Additional details about where the content was created (e.g. clinical specialty).", - "valueSet": "http://hl7.org/fhir/ValueSet/c80-practice-codes" - }, - "mapping": [ - { - "identity": "fhircomposition", - "map": "usually from a mapping to a local ValueSet" - }, - { - "identity": "rim", - "map": ".participation[typeCode=\"LOC\"].role[classCode=\"DSDLOC\"].code" - }, - { - "identity": "xds", - "map": "DocumentEntry.practiceSettingCode" - }, - { - "identity": "cda", - "map": "usually from a mapping to a local ValueSet" - } - ] - }, - { - "id": "DocumentReference.context.sourcePatientInfo", - "path": "DocumentReference.context.sourcePatientInfo", - "short": "Patient demographics from source", - "definition": "The Patient Information as known when the document was published. May be a reference to a version specific, or contained.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.context.sourcePatientInfo", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Patient" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Composition.subject" - }, - { - "identity": "rim", - "map": ".participation[typeCode=\"SBJ\"].role[typeCode=\"PAT\"]" - }, - { - "identity": "xds", - "map": "DocumentEntry.sourcePatientInfo, DocumentEntry.sourcePatientId" - }, - { - "identity": "cda", - "map": "ClinicalDocument/recordTarget/" - } - ] - }, - { - "id": "DocumentReference.context.related", - "path": "DocumentReference.context.related", - "short": "Related identifiers or resources", - "definition": "Related identifiers or resources associated with the DocumentReference.", - "comment": "May be identifiers or resources that caused the DocumentReference or referenced Document to be created.", - "min": 0, - "max": "*", - "base": { - "path": "DocumentReference.context.related", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Resource" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Composition.event.detail" - }, - { - "identity": "rim", - "map": "./outboundRelationship[typeCode=\"PERT\" and isNormalActRelationship()] / target[isNormalAct]" - }, - { - "identity": "xds", - "map": "DocumentEntry.referenceIdList" - }, - { - "identity": "cda", - "map": "ClinicalDocument/relatedDocument" - } - ] - } - ] - }, - "differential": { - "element": [ - { - "id": "DocumentReference", - "path": "DocumentReference" - }, - { - "id": "DocumentReference.content.attachment", - "path": "DocumentReference.content.attachment", - "type": [ - { - "code": "Attachment", - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment" - ] - } - ] - } - ] - } +{ + "resourceType" : "StructureDefinition", + "id" : "ncpi-drs-document-reference", + "text" : { + "status" : "extensions", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-drs-document-reference-definitions.html#DocumentReference\">DocumentReference</a><a name=\"DocumentReference\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/documentreference.html\">DocumentReference</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">A reference to a document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck01.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-drs-document-reference-definitions.html#DocumentReference.content\">content</a><a name=\"DocumentReference.content\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_datatype.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Data Type\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-drs-document-reference-definitions.html#DocumentReference.content.attachment\">attachment</a><a name=\"DocumentReference.content.attachment\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"StructureDefinition-ncpi-drs-attachment.html\" title=\"Attachment\">DRSAttachment</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Content in a format defined elsewhere</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" + }, + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", + "valueString" : "Foundation.Documents" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", + "valueCode" : "not-classified" + }], + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-document-reference", + "version" : "0.2.0", + "name" : "DRSDocumentReference", + "title" : "DRS Document Reference", + "status" : "draft", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "A FHIR Document Reference with an embedded DRS URI. See https://github.com/ga4gh/data-repository-service-schemas.", + "fhirVersion" : "4.0.1", + "mapping" : [{ + "identity" : "workflow", + "uri" : "http://hl7.org/fhir/workflow", + "name" : "Workflow Pattern" + }, + { + "identity" : "fhircomposition", + "uri" : "http://hl7.org/fhir/composition", + "name" : "FHIR Composition" + }, + { + "identity" : "rim", + "uri" : "http://hl7.org/v3", + "name" : "RIM Mapping" + }, + { + "identity" : "cda", + "uri" : "http://hl7.org/v3/cda", + "name" : "CDA (R2)" + }, + { + "identity" : "w5", + "uri" : "http://hl7.org/fhir/fivews", + "name" : "FiveWs Pattern Mapping" + }, + { + "identity" : "v2", + "uri" : "http://hl7.org/v2", + "name" : "HL7 v2 Mapping" + }, + { + "identity" : "xds", + "uri" : "http://ihe.net/xds", + "name" : "XDS metadata equivalent" + }], + "kind" : "resource", + "abstract" : false, + "type" : "DocumentReference", + "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/DocumentReference", + "derivation" : "constraint", + "snapshot" : { + "element" : [{ + "id" : "DocumentReference", + "path" : "DocumentReference", + "short" : "A reference to a document", + "definition" : "A reference to a document of any kind for any purpose. Provides metadata about the document so that the document can be discovered and managed. The scope of a document is any seralized object with a mime-type, so includes formal patient centric documents (CDA), cliical notes, scanned paper, and non-patient specific documents like policy text.", + "comment" : "Usually, this is used for documents other than those defined by FHIR.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "DocumentReference", + "min" : 0, + "max" : "*" + }, + "constraint" : [{ + "key" : "dom-2", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL NOT contain nested Resources", + "expression" : "contained.contained.empty()", + "xpath" : "not(parent::f:contained and f:contained)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-3", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", + "expression" : "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", + "xpath" : "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-4", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", + "expression" : "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-5", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a security label", + "expression" : "contained.meta.security.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:security))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", + "valueBoolean" : true + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", + "valueMarkdown" : "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." + }], + "key" : "dom-6", + "severity" : "warning", + "human" : "A resource should have narrative for robust management", + "expression" : "text.`div`.exists()", + "xpath" : "exists(f:text/h:div)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Entity. Role, or Act" + }, + { + "identity" : "workflow", + "map" : "Event" + }, + { + "identity" : "fhircomposition", + "map" : "when describing a Composition" + }, + { + "identity" : "rim", + "map" : "Document[classCode=\"DOC\" and moodCode=\"EVN\"]" + }, + { + "identity" : "cda", + "map" : "when describing a CDA" + }] + }, + { + "id" : "DocumentReference.id", + "path" : "DocumentReference.id", + "short" : "Logical id of this artifact", + "definition" : "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", + "comment" : "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "id" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "DocumentReference.meta", + "path" : "DocumentReference.meta", + "short" : "Metadata about the resource", + "definition" : "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.meta", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Meta" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "DocumentReference.implicitRules", + "path" : "DocumentReference.implicitRules", + "short" : "A set of rules under which this content was created", + "definition" : "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", + "comment" : "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.implicitRules", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", + "isSummary" : true + }, + { + "id" : "DocumentReference.language", + "path" : "DocumentReference.language", + "short" : "Language of the resource content", + "definition" : "The base language in which the resource is written.", + "comment" : "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.language", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", + "valueCanonical" : "http://hl7.org/fhir/ValueSet/all-languages" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "Language" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "preferred", + "description" : "A human language.", + "valueSet" : "http://hl7.org/fhir/ValueSet/languages" + } + }, + { + "id" : "DocumentReference.text", + "path" : "DocumentReference.text", + "short" : "Text summary of the resource, for human interpretation", + "definition" : "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", + "comment" : "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", + "alias" : ["narrative", + "html", + "xhtml", + "display"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "DomainResource.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Narrative" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Act.text?" + }] + }, + { + "id" : "DocumentReference.contained", + "path" : "DocumentReference.contained", + "short" : "Contained, inline Resources", + "definition" : "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", + "comment" : "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", + "alias" : ["inline resources", + "anonymous resources", + "contained resources"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.contained", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Resource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "DocumentReference.extension", + "path" : "DocumentReference.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "DocumentReference.modifierExtension", + "path" : "DocumentReference.modifierExtension", + "short" : "Extensions that cannot be ignored", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "DocumentReference.masterIdentifier", + "path" : "DocumentReference.masterIdentifier", + "short" : "Master Version Specific Identifier", + "definition" : "Document identifier as assigned by the source of the document. This identifier is specific to this version of the document. This unique identifier may be used elsewhere to identify this version of the document.", + "comment" : "CDA Document Id extension and root.", + "requirements" : "The structure and format of this Id shall be consistent with the specification corresponding to the formatCode attribute. (e.g. for a DICOM standard document a 64-character numeric UID, for an HL7 CDA format a serialization of the CDA Document Id extension and root in the form \"oid^extension\", where OID is a 64 digits max, and the Id is a 16 UTF-8 char max. If the OID is coded without the extension then the '^' character shall not be included.).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.masterIdentifier", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Identifier" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.identifier" + }, + { + "identity" : "w5", + "map" : "FiveWs.identifier" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.identifier" + }, + { + "identity" : "v2", + "map" : "TXA-12" + }, + { + "identity" : "rim", + "map" : ".id" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.uniqueId" + }, + { + "identity" : "cda", + "map" : "ClinicalDocument/id" + }] + }, + { + "id" : "DocumentReference.identifier", + "path" : "DocumentReference.identifier", + "short" : "Other identifiers for the document", + "definition" : "Other identifiers associated with the document, including version independent identifiers.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "DocumentReference.identifier", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Identifier" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.identifier" + }, + { + "identity" : "w5", + "map" : "FiveWs.identifier" + }, + { + "identity" : "v2", + "map" : "TXA-16?" + }, + { + "identity" : "rim", + "map" : ".id / .setId" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.entryUUID" + }] + }, + { + "id" : "DocumentReference.status", + "path" : "DocumentReference.status", + "short" : "current | superseded | entered-in-error", + "definition" : "The status of this document reference.", + "comment" : "This is the status of the DocumentReference object, which might be independent from the docStatus element.\n\nThis element is labeled as a modifier because the status contains the codes that mark the document or reference as not currently valid.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "DocumentReference.status", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labelled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid", + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "DocumentReferenceStatus" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "required", + "description" : "The status of the document reference.", + "valueSet" : "http://hl7.org/fhir/ValueSet/document-reference-status|4.0.1" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.status" + }, + { + "identity" : "w5", + "map" : "FiveWs.status" + }, + { + "identity" : "v2", + "map" : "TXA-19" + }, + { + "identity" : "rim", + "map" : "interim: .completionCode=\"IN\" & ./statusCode[isNormalDatatype()]=\"active\"; final: .completionCode=\"AU\" && ./statusCode[isNormalDatatype()]=\"complete\" and not(./inboundRelationship[typeCode=\"SUBJ\" and isNormalActRelationship()]/source[subsumesCode(\"ActClass#CACT\") and moodCode=\"EVN\" and domainMember(\"ReviseDocument\", code) and isNormalAct()]); amended: .completionCode=\"AU\" && ./statusCode[isNormalDatatype()]=\"complete\" and ./inboundRelationship[typeCode=\"SUBJ\" and isNormalActRelationship()]/source[subsumesCode(\"ActClass#CACT\") and moodCode=\"EVN\" and domainMember(\"ReviseDocument\", code) and isNormalAct() and statusCode=\"completed\"]; withdrawn : .completionCode=NI && ./statusCode[isNormalDatatype()]=\"obsolete\"" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.availabilityStatus" + }] + }, + { + "id" : "DocumentReference.docStatus", + "path" : "DocumentReference.docStatus", + "short" : "preliminary | final | amended | entered-in-error", + "definition" : "The status of the underlying document.", + "comment" : "The document that is pointed to might be in various lifecycle states.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.docStatus", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ReferredDocumentStatus" + }], + "strength" : "required", + "description" : "Status of the underlying document.", + "valueSet" : "http://hl7.org/fhir/ValueSet/composition-status|4.0.1" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.status" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.status" + }, + { + "identity" : "v2", + "map" : "TXA-17" + }, + { + "identity" : "rim", + "map" : ".statusCode" + }] + }, + { + "id" : "DocumentReference.type", + "path" : "DocumentReference.type", + "short" : "Kind of document (LOINC if possible)", + "definition" : "Specifies the particular kind of document referenced (e.g. History and Physical, Discharge Summary, Progress Note). This usually equates to the purpose of making the document referenced.", + "comment" : "Key metadata element describing the document that describes he exact type of document. Helps humans to assess whether the document is of interest when viewing a list of documents.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.type", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "DocumentC80Type" + }], + "strength" : "preferred", + "description" : "Precise type of clinical document.", + "valueSet" : "http://hl7.org/fhir/ValueSet/c80-doc-typecodes" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.code" + }, + { + "identity" : "w5", + "map" : "FiveWs.class" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.type" + }, + { + "identity" : "v2", + "map" : "TXA-2" + }, + { + "identity" : "rim", + "map" : "./code" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.type" + }, + { + "identity" : "cda", + "map" : "ClinicalDocument/code/@code \n\nThe typeCode should be mapped from the ClinicalDocument/code element to a set of document type codes configured in the affinity domain. One suggested coding system to use for typeCode is LOINC, in which case the mapping step can be omitted." + }] + }, + { + "id" : "DocumentReference.category", + "path" : "DocumentReference.category", + "short" : "Categorization of document", + "definition" : "A categorization for the type of document referenced - helps for indexing and searching. This may be implied by or derived from the code specified in the DocumentReference.type.", + "comment" : "Key metadata element describing the the category or classification of the document. This is a broader perspective that groups similar documents based on how they would be used. This is a primary key used in searching.", + "alias" : ["claxs"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DocumentReference.category", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "DocumentC80Class" + }], + "strength" : "example", + "description" : "High-level kind of a clinical document at a macro level.", + "valueSet" : "http://hl7.org/fhir/ValueSet/document-classcodes" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.class" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.class" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=\"COMP].target[classCode=\"LIST\", moodCode=\"EVN\"].code" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.class" + }, + { + "identity" : "cda", + "map" : "Derived from a mapping of /ClinicalDocument/code/@code to an Affinity Domain specified coded value to use and coding system. Affinity Domains are encouraged to use the appropriate value for Type of Service, based on the LOINC Type of Service (see Page 53 of the LOINC User's Manual). Must be consistent with /ClinicalDocument/code/@code" + }] + }, + { + "id" : "DocumentReference.subject", + "path" : "DocumentReference.subject", + "short" : "Who/what is the subject of the document", + "definition" : "Who or what the document is about. The document can be about a person, (patient or healthcare practitioner), a device (e.g. a machine) or even a group of subjects (such as a document about a herd of farm animals, or a set of patients that share a common exposure).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.subject", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Patient", + "http://hl7.org/fhir/StructureDefinition/Practitioner", + "http://hl7.org/fhir/StructureDefinition/Group", + "http://hl7.org/fhir/StructureDefinition/Device"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.subject" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject[x]" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.subject" + }, + { + "identity" : "v2", + "map" : "PID-3 (No standard way to define a Practitioner or Group subject in HL7 v2 MDM message)" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=\"SBJ\"].role[typeCode=\"PAT\"]" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.patientId" + }, + { + "identity" : "cda", + "map" : "ClinicalDocument/recordTarget/" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject" + }] + }, + { + "id" : "DocumentReference.date", + "path" : "DocumentReference.date", + "short" : "When this document reference was created", + "definition" : "When the document reference was created.", + "comment" : "Referencing/indexing time is used for tracking, organizing versions and searching.", + "alias" : ["indexed"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.date", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "instant" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.occurrence[x]" + }, + { + "identity" : "w5", + "map" : "FiveWs.recorded" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.date" + }, + { + "identity" : "rim", + "map" : ".availabilityTime[type=\"TS\"]" + }] + }, + { + "id" : "DocumentReference.author", + "path" : "DocumentReference.author", + "short" : "Who and/or what authored the document", + "definition" : "Identifies who is responsible for adding the information to the document.", + "comment" : "Not necessarily who did the actual data entry (i.e. typist) or who was the source (informant).", + "min" : 0, + "max" : "*", + "base" : { + "path" : "DocumentReference.author", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Practitioner", + "http://hl7.org/fhir/StructureDefinition/PractitionerRole", + "http://hl7.org/fhir/StructureDefinition/Organization", + "http://hl7.org/fhir/StructureDefinition/Device", + "http://hl7.org/fhir/StructureDefinition/Patient", + "http://hl7.org/fhir/StructureDefinition/RelatedPerson"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.performer.actor" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.author" + }, + { + "identity" : "v2", + "map" : "TXA-9 (No standard way to indicate a Device in HL7 v2 MDM message)" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=\"AUT\"].role[classCode=\"ASSIGNED\"]" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.author" + }, + { + "identity" : "cda", + "map" : "ClinicalDocument/author" + }] + }, + { + "id" : "DocumentReference.authenticator", + "path" : "DocumentReference.authenticator", + "short" : "Who/what authenticated the document", + "definition" : "Which person or organization authenticates that this document is valid.", + "comment" : "Represents a participant within the author institution who has legally authenticated or attested the document. Legal authentication implies that a document has been signed manually or electronically by the legal Authenticator.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.authenticator", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Practitioner", + "http://hl7.org/fhir/StructureDefinition/PractitionerRole", + "http://hl7.org/fhir/StructureDefinition/Organization"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.performer.actor" + }, + { + "identity" : "w5", + "map" : "FiveWs.witness" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.attester" + }, + { + "identity" : "v2", + "map" : "TXA-10" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=\"AUTHEN\"].role[classCode=\"ASSIGNED\"]" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.legalAuthenticator" + }, + { + "identity" : "cda", + "map" : "ClinicalDocument/legalAuthenticator" + }] + }, + { + "id" : "DocumentReference.custodian", + "path" : "DocumentReference.custodian", + "short" : "Organization which maintains the document", + "definition" : "Identifies the organization or group who is responsible for ongoing maintenance of and access to the document.", + "comment" : "Identifies the logical organization (software system, vendor, or department) to go to find the current version, where to report issues, etc. This is different from the physical location (URL, disk drive, or server) of the document, which is the technical location of the document, which host may be delegated to the management of some other organization.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.custodian", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Organization"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.performer.actor" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.custodian" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=\"RCV\"].role[classCode=\"CUST\"].scoper[classCode=\"ORG\" and determinerCode=\"INST\"]" + }] + }, + { + "id" : "DocumentReference.relatesTo", + "path" : "DocumentReference.relatesTo", + "short" : "Relationships to other documents", + "definition" : "Relationships that this document has with other document references that already exist.", + "comment" : "This element is labeled as a modifier because documents that append to other documents are incomplete on their own.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "DocumentReference.relatesTo", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Composition.relatesTo" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship" + }, + { + "identity" : "xds", + "map" : "DocumentEntry Associations" + }] + }, + { + "id" : "DocumentReference.relatesTo.id", + "path" : "DocumentReference.relatesTo.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "DocumentReference.relatesTo.extension", + "path" : "DocumentReference.relatesTo.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "DocumentReference.relatesTo.modifierExtension", + "path" : "DocumentReference.relatesTo.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "DocumentReference.relatesTo.code", + "path" : "DocumentReference.relatesTo.code", + "short" : "replaces | transforms | signs | appends", + "definition" : "The type of relationship that this document has with anther document.", + "comment" : "If this document appends another document, then the document cannot be fully understood without also accessing the referenced document.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "DocumentReference.relatesTo.code", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "DocumentRelationshipType" + }], + "strength" : "required", + "description" : "The type of relationship between documents.", + "valueSet" : "http://hl7.org/fhir/ValueSet/document-relationship-type|4.0.1" + }, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Composition.relatesTo.code" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship.typeCode" + }, + { + "identity" : "xds", + "map" : "DocumentEntry Associations type" + }] + }, + { + "id" : "DocumentReference.relatesTo.target", + "path" : "DocumentReference.relatesTo.target", + "short" : "Target of the relationship", + "definition" : "The target document of this relationship.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "DocumentReference.relatesTo.target", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/DocumentReference"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Composition.relatesTo.target" + }, + { + "identity" : "rim", + "map" : ".target[classCode=\"DOC\", moodCode=\"EVN\"].id" + }, + { + "identity" : "xds", + "map" : "DocumentEntry Associations reference" + }] + }, + { + "id" : "DocumentReference.description", + "path" : "DocumentReference.description", + "short" : "Human-readable description", + "definition" : "Human-readable description of the source document.", + "comment" : "What the document is about, a terse summary of the document.", + "requirements" : "Helps humans to assess whether the document is of interest.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.description", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "TXA-25" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=\"SUBJ\"].target.text" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.comments" + }] + }, + { + "id" : "DocumentReference.securityLabel", + "path" : "DocumentReference.securityLabel", + "short" : "Document security-tags", + "definition" : "A set of Security-Tag codes specifying the level of privacy/security of the Document. Note that DocumentReference.meta.security contains the security labels of the \"reference\" to the document, while DocumentReference.securityLabel contains a snapshot of the security labels on the document the reference refers to.", + "comment" : "The confidentiality codes can carry multiple vocabulary items. HL7 has developed an understanding of security and privacy tags that might be desirable in a Document Sharing environment, called HL7 Healthcare Privacy and Security Classification System (HCS). The following specification is recommended but not mandated, as the vocabulary bindings are an administrative domain responsibility. The use of this method is up to the policy domain such as the XDS Affinity Domain or other Trust Domain where all parties including sender and recipients are trusted to appropriately tag and enforce. \n\nIn the HL7 Healthcare Privacy and Security Classification (HCS) there are code systems specific to Confidentiality, Sensitivity, Integrity, and Handling Caveats. Some values would come from a local vocabulary as they are related to workflow roles and special projects.", + "requirements" : "Use of the Health Care Privacy/Security Classification (HCS) system of security-tag use is recommended.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "DocumentReference.securityLabel", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "SecurityLabels" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "extensible", + "description" : "Security Labels from the Healthcare Privacy and Security Classification System.", + "valueSet" : "http://hl7.org/fhir/ValueSet/security-labels" + }, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Composition.confidentiality, Composition.meta.security" + }, + { + "identity" : "v2", + "map" : "TXA-18" + }, + { + "identity" : "rim", + "map" : ".confidentialityCode" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.confidentialityCode" + }, + { + "identity" : "cda", + "map" : "ClinicalDocument/confidentialityCode/@code" + }] + }, + { + "id" : "DocumentReference.content", + "path" : "DocumentReference.content", + "short" : "Document referenced", + "definition" : "The document and format referenced. There may be multiple content element repetitions, each with a different format.", + "min" : 1, + "max" : "*", + "base" : { + "path" : "DocumentReference.content", + "min" : 1, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Bundle(Composition+*)" + }, + { + "identity" : "rim", + "map" : "document.text" + }] + }, + { + "id" : "DocumentReference.content.id", + "path" : "DocumentReference.content.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "DocumentReference.content.extension", + "path" : "DocumentReference.content.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "DocumentReference.content.modifierExtension", + "path" : "DocumentReference.content.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "DocumentReference.content.attachment", + "path" : "DocumentReference.content.attachment", + "short" : "Content in a format defined elsewhere", + "definition" : "For referring to data content defined in other formats.", + "comment" : "When providing a summary view (for example with Observation.value[x]) Attachment should be represented with a brief display text such as \"Signed Procedure Consent\".", + "min" : 1, + "max" : "1", + "base" : { + "path" : "DocumentReference.content.attachment", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "Attachment", + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment"] + }], + "condition" : ["ele-1"], + "constraint" : [{ + "key" : "att-1", + "severity" : "error", + "human" : "If the Attachment has data, it SHALL have a contentType", + "expression" : "data.empty() or contentType.exists()", + "xpath" : "not(exists(f:data)) or exists(f:contentType)", + "source" : "http://hl7.org/fhir/StructureDefinition/Attachment" + }, + { + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "must-be-drs-uri", + "severity" : "error", + "human" : "attachment.url must start with ^drs://. A drs:// hostname-based URI, as defined in the DRS documentation, that tells clients how to access this object. The intent of this field is to make DRS objects self-contained, and therefore easier for clients to store and pass around. For example, if you arrive at this DRS JSON by resolving a compact identifier-based DRS URI, the `self_uri` presents you with a hostname and properly encoded DRS ID for use in subsequent `access` endpoint calls.", + "expression" : "$this.url.matches('^drs://.*')", + "source" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment" + }], + "isModifier" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }, + { + "identity" : "v2", + "map" : "ED/RP" + }, + { + "identity" : "rim", + "map" : "ED" + }] + }, + { + "id" : "DocumentReference.content.format", + "path" : "DocumentReference.content.format", + "short" : "Format/content rules for the document", + "definition" : "An identifier of the document encoding, structure, and template that the document conforms to beyond the base format indicated in the mimeType.", + "comment" : "Note that while IHE mostly issues URNs for format types, not all documents can be identified by a URI.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.content.format", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Coding" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "DocumentFormat" + }], + "strength" : "preferred", + "description" : "Document Format Codes.", + "valueSet" : "http://hl7.org/fhir/ValueSet/formatcodes" + }, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Composition.meta.profile" + }, + { + "identity" : "rim", + "map" : "document.text" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.formatCode" + }, + { + "identity" : "cda", + "map" : "derived from the IHE Profile or Implementation Guide templateID" + }] + }, + { + "id" : "DocumentReference.context", + "path" : "DocumentReference.context", + "short" : "Clinical context of document", + "definition" : "The clinical context in which the document was prepared.", + "comment" : "These values are primarily added to help with searching for interesting/relevant documents.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.context", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "outboundRelationship[typeCode=\"SUBJ\"].target[classCode<'ACT']" + }] + }, + { + "id" : "DocumentReference.context.id", + "path" : "DocumentReference.context.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "DocumentReference.context.extension", + "path" : "DocumentReference.context.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "DocumentReference.context.modifierExtension", + "path" : "DocumentReference.context.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "DocumentReference.context.encounter", + "path" : "DocumentReference.context.encounter", + "short" : "Context of the document content", + "definition" : "Describes the clinical encounter or type of care that the document content is associated with.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "DocumentReference.context.encounter", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Encounter", + "http://hl7.org/fhir/StructureDefinition/EpisodeOfCare"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.context" + }, + { + "identity" : "w5", + "map" : "FiveWs.context" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.encounter" + }, + { + "identity" : "rim", + "map" : "unique(highest(./outboundRelationship[typeCode=\"SUBJ\" and isNormalActRelationship()], priorityNumber)/target[moodCode=\"EVN\" and classCode=(\"ENC\", \"PCPR\") and isNormalAct])" + }] + }, + { + "id" : "DocumentReference.context.event", + "path" : "DocumentReference.context.event", + "short" : "Main clinical acts documented", + "definition" : "This list of codes represents the main clinical acts, such as a colonoscopy or an appendectomy, being documented. In some cases, the event is inherent in the type Code, such as a \"History and Physical Report\" in which the procedure being documented is necessarily a \"History and Physical\" act.", + "comment" : "An event can further specialize the act inherent in the type, such as where it is simply \"Procedure Report\" and the procedure was a \"colonoscopy\". If one or more event codes are included, they shall not conflict with the values inherent in the class or type elements as such a conflict would create an ambiguous situation.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "DocumentReference.context.event", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "DocumentEventType" + }], + "strength" : "example", + "description" : "This list of codes represents the main clinical acts being documented.", + "valueSet" : "http://terminology.hl7.org/ValueSet/v3-ActCode" + }, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Composition.event.code" + }, + { + "identity" : "rim", + "map" : ".code" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.eventCodeList" + }] + }, + { + "id" : "DocumentReference.context.period", + "path" : "DocumentReference.context.period", + "short" : "Time of service that is being documented", + "definition" : "The time period over which the service that is described by the document was provided.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.context.period", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Period" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Composition.event.period" + }, + { + "identity" : "rim", + "map" : ".effectiveTime" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.serviceStartTime, DocumentEntry.serviceStopTime" + }, + { + "identity" : "cda", + "map" : "ClinicalDocument/documentationOf/\nserviceEvent/effectiveTime/low/\n@value --> ClinicalDocument/documentationOf/\nserviceEvent/effectiveTime/high/\n@value" + }] + }, + { + "id" : "DocumentReference.context.facilityType", + "path" : "DocumentReference.context.facilityType", + "short" : "Kind of facility where patient was seen", + "definition" : "The kind of facility where the patient was seen.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.context.facilityType", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "DocumentC80FacilityType" + }], + "strength" : "example", + "description" : "XDS Facility Type.", + "valueSet" : "http://hl7.org/fhir/ValueSet/c80-facilitycodes" + }, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "usually from a mapping to a local ValueSet" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=\"LOC\"].role[classCode=\"DSDLOC\"].code" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.healthcareFacilityTypeCode" + }, + { + "identity" : "cda", + "map" : "usually a mapping to a local ValueSet. Must be consistent with /clinicalDocument/code" + }] + }, + { + "id" : "DocumentReference.context.practiceSetting", + "path" : "DocumentReference.context.practiceSetting", + "short" : "Additional details about where the content was created (e.g. clinical specialty)", + "definition" : "This property may convey specifics about the practice setting where the content was created, often reflecting the clinical specialty.", + "comment" : "This element should be based on a coarse classification system for the class of specialty practice. Recommend the use of the classification system for Practice Setting, such as that described by the Subject Matter Domain in LOINC.", + "requirements" : "This is an important piece of metadata that providers often rely upon to quickly sort and/or filter out to find specific content.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.context.practiceSetting", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "DocumentC80PracticeSetting" + }], + "strength" : "example", + "description" : "Additional details about where the content was created (e.g. clinical specialty).", + "valueSet" : "http://hl7.org/fhir/ValueSet/c80-practice-codes" + }, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "usually from a mapping to a local ValueSet" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=\"LOC\"].role[classCode=\"DSDLOC\"].code" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.practiceSettingCode" + }, + { + "identity" : "cda", + "map" : "usually from a mapping to a local ValueSet" + }] + }, + { + "id" : "DocumentReference.context.sourcePatientInfo", + "path" : "DocumentReference.context.sourcePatientInfo", + "short" : "Patient demographics from source", + "definition" : "The Patient Information as known when the document was published. May be a reference to a version specific, or contained.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.context.sourcePatientInfo", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Patient"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Composition.subject" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=\"SBJ\"].role[typeCode=\"PAT\"]" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.sourcePatientInfo, DocumentEntry.sourcePatientId" + }, + { + "identity" : "cda", + "map" : "ClinicalDocument/recordTarget/" + }] + }, + { + "id" : "DocumentReference.context.related", + "path" : "DocumentReference.context.related", + "short" : "Related identifiers or resources", + "definition" : "Related identifiers or resources associated with the DocumentReference.", + "comment" : "May be identifiers or resources that caused the DocumentReference or referenced Document to be created.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "DocumentReference.context.related", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Resource"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Composition.event.detail" + }, + { + "identity" : "rim", + "map" : "./outboundRelationship[typeCode=\"PERT\" and isNormalActRelationship()] / target[isNormalAct]" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.referenceIdList" + }, + { + "identity" : "cda", + "map" : "ClinicalDocument/relatedDocument" + }] + }] + }, + "differential" : { + "element" : [{ + "id" : "DocumentReference", + "path" : "DocumentReference" + }, + { + "id" : "DocumentReference.content.attachment", + "path" : "DocumentReference.content.attachment", + "type" : [{ + "code" : "Attachment", + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment"] + }] + }] + } } \ No newline at end of file diff --git a/StructureDefinition-ncpi-drs-document-reference.profile.history.html b/StructureDefinition-ncpi-drs-document-reference.profile.history.html index fd18e7a4..03649810 100644 --- a/StructureDefinition-ncpi-drs-document-reference.profile.history.html +++ b/StructureDefinition-ncpi-drs-document-reference.profile.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -298,7 +298,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Change History</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -356,7 +356,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-drs-document-reference.profile.json.html b/StructureDefinition-ncpi-drs-document-reference.profile.json.html index 800ec5b9..978c7916 100644 --- a/StructureDefinition-ncpi-drs-document-reference.profile.json.html +++ b/StructureDefinition-ncpi-drs-document-reference.profile.json.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - JSON Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -342,7 +342,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - JSON Profile</h2> "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a>" : "DRSDocumentReference", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a>" : "DRS Document Reference", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a>" : "draft", - "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>" : [ { @@ -2826,7 +2826,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - JSON Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-drs-document-reference.profile.ttl.html b/StructureDefinition-ncpi-drs-document-reference.profile.ttl.html index 1377a59a..8f80a74a 100644 --- a/StructureDefinition-ncpi-drs-document-reference.profile.ttl.html +++ b/StructureDefinition-ncpi-drs-document-reference.profile.ttl.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - TTL Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -329,11 +329,11 @@ <h2 id="root">Resource Profile: DRSDocumentReference - TTL Profile</h2> a fhir:StructureDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-drs-document-reference"]; + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-drs-document-reference"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description &amp; Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-drs-document-reference-definitions.html#DocumentReference\">DocumentReference</a><a name=\"DocumentReference\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/documentreference.html\">DocumentReference</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">A reference to a document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck01.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-drs-document-reference-definitions.html#DocumentReference.content\">content</a><a name=\"DocumentReference.content\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_datatype.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Data Type\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-drs-document-reference-definitions.html#DocumentReference.content.attachment\">attachment</a><a name=\"DocumentReference.content.attachment\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"StructureDefinition-ncpi-drs-attachment.html\" title=\"Attachment\">DRSAttachment</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Content in a format defined elsewhere</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -342,14 +342,14 @@ <h2 id="root">Resource Profile: DRSDocumentReference - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "not-classified" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-document-reference"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "DRSDocumentReference"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "DRS Document Reference"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-document-reference"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "DRSDocumentReference"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "DRS Document Reference"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">fhir:StructureDefinition.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -365,9 +365,9 @@ <h2 id="root">Resource Profile: DRSDocumentReference - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "A FHIR Document Reference with an embedded DRS URI. See https://github.com/ga4gh/data-repository-service-schemas."]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "A FHIR Document Reference with an embedded DRS URI. See https://github.com/ga4gh/data-repository-service-schemas."]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping">fhir:StructureDefinition.mapping</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "workflow" ]; @@ -403,15 +403,15 @@ <h2 id="root">Resource Profile: DRSDocumentReference - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "xds" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.uri">fhir:StructureDefinition.mapping.uri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://ihe.net/xds" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.name">fhir:StructureDefinition.mapping.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "XDS metadata equivalent" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "DocumentReference"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "DocumentReference"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.baseDefinition">fhir:StructureDefinition.baseDefinition</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/DocumentReference"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/DocumentReference> - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot">fhir:StructureDefinition.snapshot</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot.element">fhir:StructureDefinition.snapshot.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2438,7 +2438,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 3; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.identity">fhir:ElementDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "cda" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.map">fhir:ElementDefinition.mapping.map</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ClinicalDocument/relatedDocument" ] ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential">fhir:StructureDefinition.differential</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential.element">fhir:StructureDefinition.differential.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2454,7 +2454,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment> ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -2516,7 +2516,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - TTL Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-drs-document-reference.profile.xml.html b/StructureDefinition-ncpi-drs-document-reference.profile.xml.html index 79f7ab26..972c4bcb 100644 --- a/StructureDefinition-ncpi-drs-document-reference.profile.xml.html +++ b/StructureDefinition-ncpi-drs-document-reference.profile.xml.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - XML Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -344,7 +344,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - XML Profile</h2> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="DRSDocumentReference"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="DRS Document Reference"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> - <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -2655,7 +2655,7 @@ <h2 id="root">Resource Profile: DRSDocumentReference - XML Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-drs-document-reference.ttl b/StructureDefinition-ncpi-drs-document-reference.ttl index 46b39948..f80dd858 100644 --- a/StructureDefinition-ncpi-drs-document-reference.ttl +++ b/StructureDefinition-ncpi-drs-document-reference.ttl @@ -7,11 +7,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-document-reference> a fhir:StructureDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "ncpi-drs-document-reference"]; + fhir:Resource.id [ fhir:value "ncpi-drs-document-reference"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-drs-document-reference-definitions.html#DocumentReference\">DocumentReference</a><a name=\"DocumentReference\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/documentreference.html\">DocumentReference</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">A reference to a document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck01.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-drs-document-reference-definitions.html#DocumentReference.content\">content</a><a name=\"DocumentReference.content\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_datatype.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Data Type\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-drs-document-reference-definitions.html#DocumentReference.content.attachment\">attachment</a><a name=\"DocumentReference.content.attachment\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"StructureDefinition-ncpi-drs-attachment.html\" title=\"Attachment\">DRSAttachment</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Content in a format defined elsewhere</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -20,14 +20,14 @@ fhir:index 1; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; fhir:Extension.valueCode [ fhir:value "not-classified" ] - ]; - fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-document-reference"]; - fhir:StructureDefinition.version [ fhir:value "0.2.0"]; - fhir:StructureDefinition.name [ fhir:value "DRSDocumentReference"]; - fhir:StructureDefinition.title [ fhir:value "DRS Document Reference"]; - fhir:StructureDefinition.status [ fhir:value "draft"]; - fhir:StructureDefinition.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-document-reference"]; # + fhir:StructureDefinition.version [ fhir:value "0.2.0"]; # + fhir:StructureDefinition.name [ fhir:value "DRSDocumentReference"]; # + fhir:StructureDefinition.title [ fhir:value "DRS Document Reference"]; # + fhir:StructureDefinition.status [ fhir:value "draft"]; # + fhir:StructureDefinition.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:StructureDefinition.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -45,9 +45,9 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:StructureDefinition.description [ fhir:value "A FHIR Document Reference with an embedded DRS URI. See https://github.com/ga4gh/data-repository-service-schemas."]; - fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; + ]; # + fhir:StructureDefinition.description [ fhir:value "A FHIR Document Reference with an embedded DRS URI. See https://github.com/ga4gh/data-repository-service-schemas."]; # + fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; # fhir:StructureDefinition.mapping [ fhir:index 0; fhir:StructureDefinition.mapping.identity [ fhir:value "workflow" ]; @@ -83,15 +83,15 @@ fhir:StructureDefinition.mapping.identity [ fhir:value "xds" ]; fhir:StructureDefinition.mapping.uri [ fhir:value "http://ihe.net/xds" ]; fhir:StructureDefinition.mapping.name [ fhir:value "XDS metadata equivalent" ] - ]; - fhir:StructureDefinition.kind [ fhir:value "resource"]; - fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; - fhir:StructureDefinition.type [ fhir:value "DocumentReference"]; + ]; # + fhir:StructureDefinition.kind [ fhir:value "resource"]; # + fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; # + fhir:StructureDefinition.type [ fhir:value "DocumentReference"]; # fhir:StructureDefinition.baseDefinition [ fhir:value "http://hl7.org/fhir/StructureDefinition/DocumentReference"; fhir:link <http://hl7.org/fhir/StructureDefinition/DocumentReference> - ]; - fhir:StructureDefinition.derivation [ fhir:value "constraint"]; + ]; # + fhir:StructureDefinition.derivation [ fhir:value "constraint"]; # fhir:StructureDefinition.snapshot [ fhir:StructureDefinition.snapshot.element [ fhir:index 0; @@ -2589,7 +2589,7 @@ fhir:ElementDefinition.mapping.map [ fhir:value "ClinicalDocument/relatedDocument" ] ] ] - ]; + ]; # fhir:StructureDefinition.differential [ fhir:StructureDefinition.differential.element [ fhir:index 0; @@ -2609,7 +2609,7 @@ ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/StructureDefinition-ncpi-drs-document-reference.xlsx b/StructureDefinition-ncpi-drs-document-reference.xlsx index 04b432f9..fe194556 100644 Binary files a/StructureDefinition-ncpi-drs-document-reference.xlsx and b/StructureDefinition-ncpi-drs-document-reference.xlsx differ diff --git a/StructureDefinition-ncpi-drs-document-reference.xml b/StructureDefinition-ncpi-drs-document-reference.xml index a9d2c5be..ed2c06e4 100644 --- a/StructureDefinition-ncpi-drs-document-reference.xml +++ b/StructureDefinition-ncpi-drs-document-reference.xml @@ -19,7 +19,7 @@ <name value="DRSDocumentReference"/> <title value="DRS Document Reference"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/StructureDefinition-ncpi-research-document-reference-definitions.html b/StructureDefinition-ncpi-research-document-reference-definitions.html index a42a3316..dbc7f612 100644 --- a/StructureDefinition-ncpi-research-document-reference-definitions.html +++ b/StructureDefinition-ncpi-research-document-reference-definitions.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -327,7 +327,8 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description </ul> <a name="tabs-diff"> </a> <div id="tabs-diff"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_DocumentReference"> </a><span style="color: grey">1.</span> <b>DocumentReference</b><a href="#diff_DocumentReference" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_DocumentReference.subject"> </a><span style="color: grey">2.</span> <b>DocumentReference.subject</b><a href="#diff_DocumentReference.subject" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>1</span></td></tr> @@ -340,13 +341,14 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_DocumentReference.context"> </a><span style="color: grey">6.</span> <b>DocumentReference.context</b><a href="#diff_DocumentReference.context" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>1</span></td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_DocumentReference.context.related"> </a><span style="color: grey">7.</span> <b>DocumentReference.context.related</b><a href="#diff_DocumentReference.context.related" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="http://hl7.org/fhir/R4/task.html" title="http://hl7.org/fhir/StructureDefinition/Task">Task</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="http://hl7.org/fhir/R4/task.html" title="http://hl7.org/fhir/StructureDefinition/Task">Task</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>)</td></tr> </table> </div> <a name="tabs-key"> </a> <div id="tabs-key"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="key_DocumentReference"> </a><span style="color: grey">1.</span> <b>DocumentReference</b><a href="#key_DocumentReference" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><span style='color:DarkGray'><p>A reference to a document of any kind for any purpose. Provides metadata about the document so that the document can be discovered and managed. The scope of a document is any seralized object with a mime-type, so includes formal patient centric documents (CDA), cliical notes, scanned paper, and non-patient specific documents like policy text.</p> </span></td></tr> @@ -396,14 +398,14 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description <tr><td>Definition</td><td><span style='color:DarkGray'><p>Who or what the document is about. The document can be about a person, (patient or healthcare practitioner), a device (e.g. a machine) or even a group of subjects (such as a document about a herd of farm animals, or a set of patients that share a common exposure).</p> </span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>1</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a></span>|<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>|<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a></span>|<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>|<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a></span>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: <span style='color:DarkGray'>All FHIR elements must have a @value or children</span> (: <span style='color:DarkGray'>hasValue() or (children().count() > id.count())</span>)</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="key_DocumentReference.custodian"> </a><span style="color: grey">6.</span> <b>DocumentReference.custodian</b><a href="#key_DocumentReference.custodian" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><span style='color:DarkGray'><p>Identifies the organization or group who is responsible for ongoing maintenance of and access to the document.</p> </span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>1</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a></span>)</td></tr> <tr><td>Comments</td><td><span style='color:DarkGray'><p>Identifies the logical organization (software system, vendor, or department) to go to find the current version, where to report issues, etc. This is different from the physical location (URL, disk drive, or server) of the document, which is the technical location of the document, which host may be delegated to the management of some other organization.</p> </span></td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -466,7 +468,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description <tr><td>Definition</td><td><span style='color:DarkGray'><p>Related identifiers or resources associated with the DocumentReference.</p> </span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td><span style='color:DarkGray'>0</span>..<span style='color:DarkGray'>*</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="http://hl7.org/fhir/R4/task.html" title="http://hl7.org/fhir/StructureDefinition/Task">Task</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="http://hl7.org/fhir/R4/task.html" title="http://hl7.org/fhir/StructureDefinition/Task">Task</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>)</td></tr> <tr><td>Comments</td><td><span style='color:DarkGray'><p>May be identifiers or resources that caused the DocumentReference or referenced Document to be created.</p> </span></td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -476,7 +478,8 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description </div> <a name="tabs-snap"> </a> <div id="tabs-snap"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="DocumentReference"> </a><span style="color: grey">1.</span> <b>DocumentReference</b><a href="#DocumentReference" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>A reference to a document of any kind for any purpose. Provides metadata about the document so that the document can be discovered and managed. The scope of a document is any seralized object with a mime-type, so includes formal patient centric documents (CDA), cliical notes, scanned paper, and non-patient specific documents like policy text.</p> </td></tr> @@ -524,7 +527,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#Narrative">Narrative</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrativehtmlxhtmldisplay</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrative, html, xhtml, display</td></tr> <tr><td>Comments</td><td><p>Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a "text blob" or where text is additionally entered raw or narrated and encoded information is added later.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -534,7 +537,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/resource.html">Resource</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resourcesanonymous resourcescontained resources</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resources, anonymous resources, contained resources</td></tr> <tr><td>Comments</td><td><p>This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="DocumentReference.extension"> </a><span style="color: grey">8.</span> <b>DocumentReference.extension</b><a href="#DocumentReference.extension" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -542,7 +545,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -556,7 +559,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -635,7 +638,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description <tr><td>Definition</td><td><p>Who or what the document is about. The document can be about a person, (patient or healthcare practitioner), a device (e.g. a machine) or even a group of subjects (such as a document about a herd of farm animals, or a set of patients that share a common exposure).</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a><a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a>|<a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a>|<a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="DocumentReference.date"> </a><span style="color: grey">17.</span> <b>DocumentReference.date</b><a href="#DocumentReference.date" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -652,7 +655,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description <tr><td>Definition</td><td><p>Identifies who is responsible for adding the information to the document.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a><a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a><a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a>|<a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a>|<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>|<a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a>|<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>)</td></tr> <tr><td>Comments</td><td><p>Not necessarily who did the actual data entry (i.e. typist) or who was the source (informant).</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -661,7 +664,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description <tr><td>Definition</td><td><p>Which person or organization authenticates that this document is valid.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a><a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a>|<a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a>|<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>)</td></tr> <tr><td>Comments</td><td><p>Represents a participant within the author institution who has legally authenticated or attested the document. Legal authentication implies that a document has been signed manually or electronically by the legal Authenticator.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -670,7 +673,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description <tr><td>Definition</td><td><p>Identifies the organization or group who is responsible for ongoing maintenance of and access to the document.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>)</td></tr> <tr><td>Comments</td><td><p>Identifies the logical organization (software system, vendor, or department) to go to find the current version, where to report issues, etc. This is different from the physical location (URL, disk drive, or server) of the document, which is the technical location of the document, which host may be delegated to the management of some other organization.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -695,7 +698,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -709,7 +712,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -730,7 +733,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description <tr><td>Definition</td><td><p>The target document of this relationship.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/documentreference.html" title="http://hl7.org/fhir/StructureDefinition/DocumentReference">DocumentReference</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/documentreference.html" title="http://hl7.org/fhir/StructureDefinition/DocumentReference">DocumentReference</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="DocumentReference.description"> </a><span style="color: grey">27.</span> <b>DocumentReference.description</b><a href="#DocumentReference.description" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -777,7 +780,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -791,7 +794,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -837,7 +840,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -851,7 +854,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -860,7 +863,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description <tr><td>Definition</td><td><p>Describes the clinical encounter or type of care that the document content is associated with.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html" title="http://hl7.org/fhir/StructureDefinition/Encounter">Encounter</a><a href="http://hl7.org/fhir/R4/episodeofcare.html" title="http://hl7.org/fhir/StructureDefinition/EpisodeOfCare">EpisodeOfCare</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html" title="http://hl7.org/fhir/StructureDefinition/Encounter">Encounter</a>|<a href="http://hl7.org/fhir/R4/episodeofcare.html" title="http://hl7.org/fhir/StructureDefinition/EpisodeOfCare">EpisodeOfCare</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="DocumentReference.context.event"> </a><span style="color: grey">40.</span> <b>DocumentReference.context.event</b><a href="#DocumentReference.context.event" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -910,14 +913,14 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description <tr><td>Definition</td><td><p>The Patient Information as known when the document was published. May be a reference to a version specific, or contained.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="DocumentReference.context.related"> </a><span style="color: grey">45.</span> <b>DocumentReference.context.related</b><a href="#DocumentReference.context.related" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>Related identifiers or resources associated with the DocumentReference.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/task.html" title="http://hl7.org/fhir/StructureDefinition/Task">Task</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/task.html" title="http://hl7.org/fhir/StructureDefinition/Task">Task</a>)</td></tr> <tr><td>Comments</td><td><p>May be identifiers or resources that caused the DocumentReference or referenced Document to be created.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -978,7 +981,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Detailed Description <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-research-document-reference-examples.html b/StructureDefinition-ncpi-research-document-reference-examples.html index 9e8d04e0..71e06421 100644 --- a/StructureDefinition-ncpi-research-document-reference-examples.html +++ b/StructureDefinition-ncpi-research-document-reference-examples.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Examples</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -378,7 +378,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Examples</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-research-document-reference-mappings.html b/StructureDefinition-ncpi-research-document-reference-mappings.html index 403a2822..d6222276 100644 --- a/StructureDefinition-ncpi-research-document-reference-mappings.html +++ b/StructureDefinition-ncpi-research-document-reference-mappings.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Mappings</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -534,7 +534,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Mappings</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-research-document-reference-testing.html b/StructureDefinition-ncpi-research-document-reference-testing.html index 1d4a0e2e..b572daf9 100644 --- a/StructureDefinition-ncpi-research-document-reference-testing.html +++ b/StructureDefinition-ncpi-research-document-reference-testing.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Testing</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -362,7 +362,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Testing</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-research-document-reference.html b/StructureDefinition-ncpi-research-document-reference.html index 5f7de037..213d08e2 100644 --- a/StructureDefinition-ncpi-research-document-reference.html +++ b/StructureDefinition-ncpi-research-document-reference.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -321,7 +321,7 @@ <h2 id="root">Resource Profile: Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -1030,7 +1030,7 @@ <h4>Constraints</h4> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-research-document-reference.json b/StructureDefinition-ncpi-research-document-reference.json index 5942879a..b4584715 100644 --- a/StructureDefinition-ncpi-research-document-reference.json +++ b/StructureDefinition-ncpi-research-document-reference.json @@ -1,2480 +1,2126 @@ -{ - "resourceType": "StructureDefinition", - "id": "ncpi-research-document-reference", - "text": { - "status": "extensions", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference\">DocumentReference</a><a name=\"DocumentReference\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/documentreference.html\">DocumentReference</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">A reference to a document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.subject\">subject</a><a name=\"DocumentReference.subject\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/patient.html\">Patient</a> | <a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/practitioner.html\">Practitioner</a> | <a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/group.html\">Group</a> | <a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/device.html\">Device</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Who/what is the subject of the document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.custodian\">custodian</a><a name=\"DocumentReference.custodian\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/organization.html\">Organization</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Organization which maintains the document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.content\">content</a><a name=\"DocumentReference.content\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck100.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_datatype.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Data Type\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.content.attachment\">attachment</a><a name=\"DocumentReference.content.attachment\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"StructureDefinition-ncpi-drs-attachment.html\" title=\"Attachment\">DRSAttachment</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Content in a format defined elsewhere</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck01.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.context\">context</a><a name=\"DocumentReference.context\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#BackboneElement\">BackboneElement</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Clinical context of document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.context.related\">related</a><a name=\"DocumentReference.context.related\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/task.html\">Task</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Related identifiers or resources</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - }, - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", - "valueString": "Foundation.Documents" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", - "valueCode": "not-classified" - } - ], - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-document-reference", - "version": "0.2.0", - "name": "ResearchDocumentReference", - "title": "Research Document Reference", - "status": "draft", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "A FHIR Document Reference created by an analysis task. Context.related = Task ", - "fhirVersion": "4.0.1", - "mapping": [ - { - "identity": "workflow", - "uri": "http://hl7.org/fhir/workflow", - "name": "Workflow Pattern" - }, - { - "identity": "fhircomposition", - "uri": "http://hl7.org/fhir/composition", - "name": "FHIR Composition" - }, - { - "identity": "rim", - "uri": "http://hl7.org/v3", - "name": "RIM Mapping" - }, - { - "identity": "cda", - "uri": "http://hl7.org/v3/cda", - "name": "CDA (R2)" - }, - { - "identity": "w5", - "uri": "http://hl7.org/fhir/fivews", - "name": "FiveWs Pattern Mapping" - }, - { - "identity": "v2", - "uri": "http://hl7.org/v2", - "name": "HL7 v2 Mapping" - }, - { - "identity": "xds", - "uri": "http://ihe.net/xds", - "name": "XDS metadata equivalent" - } - ], - "kind": "resource", - "abstract": false, - "type": "DocumentReference", - "baseDefinition": "http://hl7.org/fhir/StructureDefinition/DocumentReference", - "derivation": "constraint", - "snapshot": { - "element": [ - { - "id": "DocumentReference", - "path": "DocumentReference", - "short": "A reference to a document", - "definition": "A reference to a document of any kind for any purpose. Provides metadata about the document so that the document can be discovered and managed. The scope of a document is any seralized object with a mime-type, so includes formal patient centric documents (CDA), cliical notes, scanned paper, and non-patient specific documents like policy text.", - "comment": "Usually, this is used for documents other than those defined by FHIR.", - "min": 0, - "max": "*", - "base": { - "path": "DocumentReference", - "min": 0, - "max": "*" - }, - "constraint": [ - { - "key": "dom-2", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL NOT contain nested Resources", - "expression": "contained.contained.empty()", - "xpath": "not(parent::f:contained and f:contained)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-3", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", - "expression": "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", - "xpath": "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-4", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", - "expression": "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-5", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a security label", - "expression": "contained.meta.security.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:security))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", - "valueBoolean": true - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", - "valueMarkdown": "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." - } - ], - "key": "dom-6", - "severity": "warning", - "human": "A resource should have narrative for robust management", - "expression": "text.`div`.exists()", - "xpath": "exists(f:text/h:div)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Entity. Role, or Act" - }, - { - "identity": "workflow", - "map": "Event" - }, - { - "identity": "fhircomposition", - "map": "when describing a Composition" - }, - { - "identity": "rim", - "map": "Document[classCode=\"DOC\" and moodCode=\"EVN\"]" - }, - { - "identity": "cda", - "map": "when describing a CDA" - } - ] - }, - { - "id": "DocumentReference.id", - "path": "DocumentReference.id", - "short": "Logical id of this artifact", - "definition": "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", - "comment": "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "id" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "DocumentReference.meta", - "path": "DocumentReference.meta", - "short": "Metadata about the resource", - "definition": "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.meta", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Meta" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "DocumentReference.implicitRules", - "path": "DocumentReference.implicitRules", - "short": "A set of rules under which this content was created", - "definition": "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", - "comment": "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.implicitRules", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", - "isSummary": true - }, - { - "id": "DocumentReference.language", - "path": "DocumentReference.language", - "short": "Language of the resource content", - "definition": "The base language in which the resource is written.", - "comment": "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", - "min": 0, - "max": "1", - "base": { - "path": "Resource.language", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", - "valueCanonical": "http://hl7.org/fhir/ValueSet/all-languages" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "Language" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "preferred", - "description": "A human language.", - "valueSet": "http://hl7.org/fhir/ValueSet/languages" - } - }, - { - "id": "DocumentReference.text", - "path": "DocumentReference.text", - "short": "Text summary of the resource, for human interpretation", - "definition": "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", - "comment": "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", - "alias": [ - "narrative", - "html", - "xhtml", - "display" - ], - "min": 0, - "max": "1", - "base": { - "path": "DomainResource.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Narrative" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Act.text?" - } - ] - }, - { - "id": "DocumentReference.contained", - "path": "DocumentReference.contained", - "short": "Contained, inline Resources", - "definition": "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", - "comment": "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", - "alias": [ - "inline resources", - "anonymous resources", - "contained resources" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.contained", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Resource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "DocumentReference.extension", - "path": "DocumentReference.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "DocumentReference.modifierExtension", - "path": "DocumentReference.modifierExtension", - "short": "Extensions that cannot be ignored", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "DocumentReference.masterIdentifier", - "path": "DocumentReference.masterIdentifier", - "short": "Master Version Specific Identifier", - "definition": "Document identifier as assigned by the source of the document. This identifier is specific to this version of the document. This unique identifier may be used elsewhere to identify this version of the document.", - "comment": "CDA Document Id extension and root.", - "requirements": "The structure and format of this Id shall be consistent with the specification corresponding to the formatCode attribute. (e.g. for a DICOM standard document a 64-character numeric UID, for an HL7 CDA format a serialization of the CDA Document Id extension and root in the form \"oid^extension\", where OID is a 64 digits max, and the Id is a 16 UTF-8 char max. If the OID is coded without the extension then the '^' character shall not be included.).", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.masterIdentifier", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Identifier" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.identifier" - }, - { - "identity": "w5", - "map": "FiveWs.identifier" - }, - { - "identity": "fhircomposition", - "map": "Composition.identifier" - }, - { - "identity": "v2", - "map": "TXA-12" - }, - { - "identity": "rim", - "map": ".id" - }, - { - "identity": "xds", - "map": "DocumentEntry.uniqueId" - }, - { - "identity": "cda", - "map": "ClinicalDocument/id" - } - ] - }, - { - "id": "DocumentReference.identifier", - "path": "DocumentReference.identifier", - "short": "Other identifiers for the document", - "definition": "Other identifiers associated with the document, including version independent identifiers.", - "min": 0, - "max": "*", - "base": { - "path": "DocumentReference.identifier", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Identifier" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.identifier" - }, - { - "identity": "w5", - "map": "FiveWs.identifier" - }, - { - "identity": "v2", - "map": "TXA-16?" - }, - { - "identity": "rim", - "map": ".id / .setId" - }, - { - "identity": "xds", - "map": "DocumentEntry.entryUUID" - } - ] - }, - { - "id": "DocumentReference.status", - "path": "DocumentReference.status", - "short": "current | superseded | entered-in-error", - "definition": "The status of this document reference.", - "comment": "This is the status of the DocumentReference object, which might be independent from the docStatus element.\n\nThis element is labeled as a modifier because the status contains the codes that mark the document or reference as not currently valid.", - "min": 1, - "max": "1", - "base": { - "path": "DocumentReference.status", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labelled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid", - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "DocumentReferenceStatus" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "required", - "description": "The status of the document reference.", - "valueSet": "http://hl7.org/fhir/ValueSet/document-reference-status|4.0.1" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.status" - }, - { - "identity": "w5", - "map": "FiveWs.status" - }, - { - "identity": "v2", - "map": "TXA-19" - }, - { - "identity": "rim", - "map": "interim: .completionCode=\"IN\" & ./statusCode[isNormalDatatype()]=\"active\"; final: .completionCode=\"AU\" && ./statusCode[isNormalDatatype()]=\"complete\" and not(./inboundRelationship[typeCode=\"SUBJ\" and isNormalActRelationship()]/source[subsumesCode(\"ActClass#CACT\") and moodCode=\"EVN\" and domainMember(\"ReviseDocument\", code) and isNormalAct()]); amended: .completionCode=\"AU\" && ./statusCode[isNormalDatatype()]=\"complete\" and ./inboundRelationship[typeCode=\"SUBJ\" and isNormalActRelationship()]/source[subsumesCode(\"ActClass#CACT\") and moodCode=\"EVN\" and domainMember(\"ReviseDocument\", code) and isNormalAct() and statusCode=\"completed\"]; withdrawn : .completionCode=NI && ./statusCode[isNormalDatatype()]=\"obsolete\"" - }, - { - "identity": "xds", - "map": "DocumentEntry.availabilityStatus" - } - ] - }, - { - "id": "DocumentReference.docStatus", - "path": "DocumentReference.docStatus", - "short": "preliminary | final | amended | entered-in-error", - "definition": "The status of the underlying document.", - "comment": "The document that is pointed to might be in various lifecycle states.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.docStatus", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ReferredDocumentStatus" - } - ], - "strength": "required", - "description": "Status of the underlying document.", - "valueSet": "http://hl7.org/fhir/ValueSet/composition-status|4.0.1" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.status" - }, - { - "identity": "fhircomposition", - "map": "Composition.status" - }, - { - "identity": "v2", - "map": "TXA-17" - }, - { - "identity": "rim", - "map": ".statusCode" - } - ] - }, - { - "id": "DocumentReference.type", - "path": "DocumentReference.type", - "short": "Kind of document (LOINC if possible)", - "definition": "Specifies the particular kind of document referenced (e.g. History and Physical, Discharge Summary, Progress Note). This usually equates to the purpose of making the document referenced.", - "comment": "Key metadata element describing the document that describes he exact type of document. Helps humans to assess whether the document is of interest when viewing a list of documents.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.type", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "DocumentC80Type" - } - ], - "strength": "preferred", - "description": "Precise type of clinical document.", - "valueSet": "http://hl7.org/fhir/ValueSet/c80-doc-typecodes" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.code" - }, - { - "identity": "w5", - "map": "FiveWs.class" - }, - { - "identity": "fhircomposition", - "map": "Composition.type" - }, - { - "identity": "v2", - "map": "TXA-2" - }, - { - "identity": "rim", - "map": "./code" - }, - { - "identity": "xds", - "map": "DocumentEntry.type" - }, - { - "identity": "cda", - "map": "ClinicalDocument/code/@code \n\nThe typeCode should be mapped from the ClinicalDocument/code element to a set of document type codes configured in the affinity domain. One suggested coding system to use for typeCode is LOINC, in which case the mapping step can be omitted." - } - ] - }, - { - "id": "DocumentReference.category", - "path": "DocumentReference.category", - "short": "Categorization of document", - "definition": "A categorization for the type of document referenced - helps for indexing and searching. This may be implied by or derived from the code specified in the DocumentReference.type.", - "comment": "Key metadata element describing the the category or classification of the document. This is a broader perspective that groups similar documents based on how they would be used. This is a primary key used in searching.", - "alias": [ - "claxs" - ], - "min": 0, - "max": "*", - "base": { - "path": "DocumentReference.category", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "DocumentC80Class" - } - ], - "strength": "example", - "description": "High-level kind of a clinical document at a macro level.", - "valueSet": "http://hl7.org/fhir/ValueSet/document-classcodes" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.class" - }, - { - "identity": "fhircomposition", - "map": "Composition.class" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=\"COMP].target[classCode=\"LIST\", moodCode=\"EVN\"].code" - }, - { - "identity": "xds", - "map": "DocumentEntry.class" - }, - { - "identity": "cda", - "map": "Derived from a mapping of /ClinicalDocument/code/@code to an Affinity Domain specified coded value to use and coding system. Affinity Domains are encouraged to use the appropriate value for Type of Service, based on the LOINC Type of Service (see Page 53 of the LOINC User's Manual). Must be consistent with /ClinicalDocument/code/@code" - } - ] - }, - { - "id": "DocumentReference.subject", - "path": "DocumentReference.subject", - "short": "Who/what is the subject of the document", - "definition": "Who or what the document is about. The document can be about a person, (patient or healthcare practitioner), a device (e.g. a machine) or even a group of subjects (such as a document about a herd of farm animals, or a set of patients that share a common exposure).", - "min": 1, - "max": "1", - "base": { - "path": "DocumentReference.subject", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Patient", - "http://hl7.org/fhir/StructureDefinition/Practitioner", - "http://hl7.org/fhir/StructureDefinition/Group", - "http://hl7.org/fhir/StructureDefinition/Device" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.subject" - }, - { - "identity": "w5", - "map": "FiveWs.subject[x]" - }, - { - "identity": "fhircomposition", - "map": "Composition.subject" - }, - { - "identity": "v2", - "map": "PID-3 (No standard way to define a Practitioner or Group subject in HL7 v2 MDM message)" - }, - { - "identity": "rim", - "map": ".participation[typeCode=\"SBJ\"].role[typeCode=\"PAT\"]" - }, - { - "identity": "xds", - "map": "DocumentEntry.patientId" - }, - { - "identity": "cda", - "map": "ClinicalDocument/recordTarget/" - }, - { - "identity": "w5", - "map": "FiveWs.subject" - } - ] - }, - { - "id": "DocumentReference.date", - "path": "DocumentReference.date", - "short": "When this document reference was created", - "definition": "When the document reference was created.", - "comment": "Referencing/indexing time is used for tracking, organizing versions and searching.", - "alias": [ - "indexed" - ], - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.date", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "instant" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.occurrence[x]" - }, - { - "identity": "w5", - "map": "FiveWs.recorded" - }, - { - "identity": "fhircomposition", - "map": "Composition.date" - }, - { - "identity": "rim", - "map": ".availabilityTime[type=\"TS\"]" - } - ] - }, - { - "id": "DocumentReference.author", - "path": "DocumentReference.author", - "short": "Who and/or what authored the document", - "definition": "Identifies who is responsible for adding the information to the document.", - "comment": "Not necessarily who did the actual data entry (i.e. typist) or who was the source (informant).", - "min": 0, - "max": "*", - "base": { - "path": "DocumentReference.author", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Practitioner", - "http://hl7.org/fhir/StructureDefinition/PractitionerRole", - "http://hl7.org/fhir/StructureDefinition/Organization", - "http://hl7.org/fhir/StructureDefinition/Device", - "http://hl7.org/fhir/StructureDefinition/Patient", - "http://hl7.org/fhir/StructureDefinition/RelatedPerson" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.performer.actor" - }, - { - "identity": "fhircomposition", - "map": "Composition.author" - }, - { - "identity": "v2", - "map": "TXA-9 (No standard way to indicate a Device in HL7 v2 MDM message)" - }, - { - "identity": "rim", - "map": ".participation[typeCode=\"AUT\"].role[classCode=\"ASSIGNED\"]" - }, - { - "identity": "xds", - "map": "DocumentEntry.author" - }, - { - "identity": "cda", - "map": "ClinicalDocument/author" - } - ] - }, - { - "id": "DocumentReference.authenticator", - "path": "DocumentReference.authenticator", - "short": "Who/what authenticated the document", - "definition": "Which person or organization authenticates that this document is valid.", - "comment": "Represents a participant within the author institution who has legally authenticated or attested the document. Legal authentication implies that a document has been signed manually or electronically by the legal Authenticator.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.authenticator", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Practitioner", - "http://hl7.org/fhir/StructureDefinition/PractitionerRole", - "http://hl7.org/fhir/StructureDefinition/Organization" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Event.performer.actor" - }, - { - "identity": "w5", - "map": "FiveWs.witness" - }, - { - "identity": "fhircomposition", - "map": "Composition.attester" - }, - { - "identity": "v2", - "map": "TXA-10" - }, - { - "identity": "rim", - "map": ".participation[typeCode=\"AUTHEN\"].role[classCode=\"ASSIGNED\"]" - }, - { - "identity": "xds", - "map": "DocumentEntry.legalAuthenticator" - }, - { - "identity": "cda", - "map": "ClinicalDocument/legalAuthenticator" - } - ] - }, - { - "id": "DocumentReference.custodian", - "path": "DocumentReference.custodian", - "short": "Organization which maintains the document", - "definition": "Identifies the organization or group who is responsible for ongoing maintenance of and access to the document.", - "comment": "Identifies the logical organization (software system, vendor, or department) to go to find the current version, where to report issues, etc. This is different from the physical location (URL, disk drive, or server) of the document, which is the technical location of the document, which host may be delegated to the management of some other organization.", - "min": 1, - "max": "1", - "base": { - "path": "DocumentReference.custodian", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Organization" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Event.performer.actor" - }, - { - "identity": "fhircomposition", - "map": "Composition.custodian" - }, - { - "identity": "rim", - "map": ".participation[typeCode=\"RCV\"].role[classCode=\"CUST\"].scoper[classCode=\"ORG\" and determinerCode=\"INST\"]" - } - ] - }, - { - "id": "DocumentReference.relatesTo", - "path": "DocumentReference.relatesTo", - "short": "Relationships to other documents", - "definition": "Relationships that this document has with other document references that already exist.", - "comment": "This element is labeled as a modifier because documents that append to other documents are incomplete on their own.", - "min": 0, - "max": "*", - "base": { - "path": "DocumentReference.relatesTo", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Composition.relatesTo" - }, - { - "identity": "rim", - "map": ".outboundRelationship" - }, - { - "identity": "xds", - "map": "DocumentEntry Associations" - } - ] - }, - { - "id": "DocumentReference.relatesTo.id", - "path": "DocumentReference.relatesTo.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "DocumentReference.relatesTo.extension", - "path": "DocumentReference.relatesTo.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "DocumentReference.relatesTo.modifierExtension", - "path": "DocumentReference.relatesTo.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "DocumentReference.relatesTo.code", - "path": "DocumentReference.relatesTo.code", - "short": "replaces | transforms | signs | appends", - "definition": "The type of relationship that this document has with anther document.", - "comment": "If this document appends another document, then the document cannot be fully understood without also accessing the referenced document.", - "min": 1, - "max": "1", - "base": { - "path": "DocumentReference.relatesTo.code", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "DocumentRelationshipType" - } - ], - "strength": "required", - "description": "The type of relationship between documents.", - "valueSet": "http://hl7.org/fhir/ValueSet/document-relationship-type|4.0.1" - }, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Composition.relatesTo.code" - }, - { - "identity": "rim", - "map": ".outboundRelationship.typeCode" - }, - { - "identity": "xds", - "map": "DocumentEntry Associations type" - } - ] - }, - { - "id": "DocumentReference.relatesTo.target", - "path": "DocumentReference.relatesTo.target", - "short": "Target of the relationship", - "definition": "The target document of this relationship.", - "min": 1, - "max": "1", - "base": { - "path": "DocumentReference.relatesTo.target", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/DocumentReference" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Composition.relatesTo.target" - }, - { - "identity": "rim", - "map": ".target[classCode=\"DOC\", moodCode=\"EVN\"].id" - }, - { - "identity": "xds", - "map": "DocumentEntry Associations reference" - } - ] - }, - { - "id": "DocumentReference.description", - "path": "DocumentReference.description", - "short": "Human-readable description", - "definition": "Human-readable description of the source document.", - "comment": "What the document is about, a terse summary of the document.", - "requirements": "Helps humans to assess whether the document is of interest.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.description", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "TXA-25" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=\"SUBJ\"].target.text" - }, - { - "identity": "xds", - "map": "DocumentEntry.comments" - } - ] - }, - { - "id": "DocumentReference.securityLabel", - "path": "DocumentReference.securityLabel", - "short": "Document security-tags", - "definition": "A set of Security-Tag codes specifying the level of privacy/security of the Document. Note that DocumentReference.meta.security contains the security labels of the \"reference\" to the document, while DocumentReference.securityLabel contains a snapshot of the security labels on the document the reference refers to.", - "comment": "The confidentiality codes can carry multiple vocabulary items. HL7 has developed an understanding of security and privacy tags that might be desirable in a Document Sharing environment, called HL7 Healthcare Privacy and Security Classification System (HCS). The following specification is recommended but not mandated, as the vocabulary bindings are an administrative domain responsibility. The use of this method is up to the policy domain such as the XDS Affinity Domain or other Trust Domain where all parties including sender and recipients are trusted to appropriately tag and enforce. \n\nIn the HL7 Healthcare Privacy and Security Classification (HCS) there are code systems specific to Confidentiality, Sensitivity, Integrity, and Handling Caveats. Some values would come from a local vocabulary as they are related to workflow roles and special projects.", - "requirements": "Use of the Health Care Privacy/Security Classification (HCS) system of security-tag use is recommended.", - "min": 0, - "max": "*", - "base": { - "path": "DocumentReference.securityLabel", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "SecurityLabels" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "extensible", - "description": "Security Labels from the Healthcare Privacy and Security Classification System.", - "valueSet": "http://hl7.org/fhir/ValueSet/security-labels" - }, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Composition.confidentiality, Composition.meta.security" - }, - { - "identity": "v2", - "map": "TXA-18" - }, - { - "identity": "rim", - "map": ".confidentialityCode" - }, - { - "identity": "xds", - "map": "DocumentEntry.confidentialityCode" - }, - { - "identity": "cda", - "map": "ClinicalDocument/confidentialityCode/@code" - } - ] - }, - { - "id": "DocumentReference.content", - "path": "DocumentReference.content", - "short": "Document referenced", - "definition": "The document and format referenced. There may be multiple content element repetitions, each with a different format.", - "min": 1, - "max": "*", - "base": { - "path": "DocumentReference.content", - "min": 1, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Bundle(Composition+*)" - }, - { - "identity": "rim", - "map": "document.text" - } - ] - }, - { - "id": "DocumentReference.content.id", - "path": "DocumentReference.content.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "DocumentReference.content.extension", - "path": "DocumentReference.content.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "DocumentReference.content.modifierExtension", - "path": "DocumentReference.content.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "DocumentReference.content.attachment", - "path": "DocumentReference.content.attachment", - "short": "Content in a format defined elsewhere", - "definition": "For referring to data content defined in other formats.", - "comment": "When providing a summary view (for example with Observation.value[x]) Attachment should be represented with a brief display text such as \"Signed Procedure Consent\".", - "min": 1, - "max": "1", - "base": { - "path": "DocumentReference.content.attachment", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "Attachment", - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment" - ] - } - ], - "condition": [ - "ele-1" - ], - "constraint": [ - { - "key": "att-1", - "severity": "error", - "human": "If the Attachment has data, it SHALL have a contentType", - "expression": "data.empty() or contentType.exists()", - "xpath": "not(exists(f:data)) or exists(f:contentType)", - "source": "http://hl7.org/fhir/StructureDefinition/Attachment" - }, - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "must-be-drs-uri", - "severity": "error", - "human": "attachment.url must start with ^drs://. A drs:// hostname-based URI, as defined in the DRS documentation, that tells clients how to access this object. The intent of this field is to make DRS objects self-contained, and therefore easier for clients to store and pass around. For example, if you arrive at this DRS JSON by resolving a compact identifier-based DRS URI, the `self_uri` presents you with a hostname and properly encoded DRS ID for use in subsequent `access` endpoint calls.", - "expression": "$this.url.matches('^drs://.*')", - "source": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment" - } - ], - "isModifier": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - }, - { - "identity": "v2", - "map": "ED/RP" - }, - { - "identity": "rim", - "map": "ED" - } - ] - }, - { - "id": "DocumentReference.content.format", - "path": "DocumentReference.content.format", - "short": "Format/content rules for the document", - "definition": "An identifier of the document encoding, structure, and template that the document conforms to beyond the base format indicated in the mimeType.", - "comment": "Note that while IHE mostly issues URNs for format types, not all documents can be identified by a URI.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.content.format", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Coding" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "DocumentFormat" - } - ], - "strength": "preferred", - "description": "Document Format Codes.", - "valueSet": "http://hl7.org/fhir/ValueSet/formatcodes" - }, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Composition.meta.profile" - }, - { - "identity": "rim", - "map": "document.text" - }, - { - "identity": "xds", - "map": "DocumentEntry.formatCode" - }, - { - "identity": "cda", - "map": "derived from the IHE Profile or Implementation Guide templateID" - } - ] - }, - { - "id": "DocumentReference.context", - "path": "DocumentReference.context", - "short": "Clinical context of document", - "definition": "The clinical context in which the document was prepared.", - "comment": "These values are primarily added to help with searching for interesting/relevant documents.", - "min": 1, - "max": "1", - "base": { - "path": "DocumentReference.context", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "outboundRelationship[typeCode=\"SUBJ\"].target[classCode<'ACT']" - } - ] - }, - { - "id": "DocumentReference.context.id", - "path": "DocumentReference.context.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "DocumentReference.context.extension", - "path": "DocumentReference.context.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "DocumentReference.context.modifierExtension", - "path": "DocumentReference.context.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "DocumentReference.context.encounter", - "path": "DocumentReference.context.encounter", - "short": "Context of the document content", - "definition": "Describes the clinical encounter or type of care that the document content is associated with.", - "min": 0, - "max": "*", - "base": { - "path": "DocumentReference.context.encounter", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Encounter", - "http://hl7.org/fhir/StructureDefinition/EpisodeOfCare" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Event.context" - }, - { - "identity": "w5", - "map": "FiveWs.context" - }, - { - "identity": "fhircomposition", - "map": "Composition.encounter" - }, - { - "identity": "rim", - "map": "unique(highest(./outboundRelationship[typeCode=\"SUBJ\" and isNormalActRelationship()], priorityNumber)/target[moodCode=\"EVN\" and classCode=(\"ENC\", \"PCPR\") and isNormalAct])" - } - ] - }, - { - "id": "DocumentReference.context.event", - "path": "DocumentReference.context.event", - "short": "Main clinical acts documented", - "definition": "This list of codes represents the main clinical acts, such as a colonoscopy or an appendectomy, being documented. In some cases, the event is inherent in the type Code, such as a \"History and Physical Report\" in which the procedure being documented is necessarily a \"History and Physical\" act.", - "comment": "An event can further specialize the act inherent in the type, such as where it is simply \"Procedure Report\" and the procedure was a \"colonoscopy\". If one or more event codes are included, they shall not conflict with the values inherent in the class or type elements as such a conflict would create an ambiguous situation.", - "min": 0, - "max": "*", - "base": { - "path": "DocumentReference.context.event", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "DocumentEventType" - } - ], - "strength": "example", - "description": "This list of codes represents the main clinical acts being documented.", - "valueSet": "http://terminology.hl7.org/ValueSet/v3-ActCode" - }, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Composition.event.code" - }, - { - "identity": "rim", - "map": ".code" - }, - { - "identity": "xds", - "map": "DocumentEntry.eventCodeList" - } - ] - }, - { - "id": "DocumentReference.context.period", - "path": "DocumentReference.context.period", - "short": "Time of service that is being documented", - "definition": "The time period over which the service that is described by the document was provided.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.context.period", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Period" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Composition.event.period" - }, - { - "identity": "rim", - "map": ".effectiveTime" - }, - { - "identity": "xds", - "map": "DocumentEntry.serviceStartTime, DocumentEntry.serviceStopTime" - }, - { - "identity": "cda", - "map": "ClinicalDocument/documentationOf/\nserviceEvent/effectiveTime/low/\n@value --> ClinicalDocument/documentationOf/\nserviceEvent/effectiveTime/high/\n@value" - } - ] - }, - { - "id": "DocumentReference.context.facilityType", - "path": "DocumentReference.context.facilityType", - "short": "Kind of facility where patient was seen", - "definition": "The kind of facility where the patient was seen.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.context.facilityType", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "DocumentC80FacilityType" - } - ], - "strength": "example", - "description": "XDS Facility Type.", - "valueSet": "http://hl7.org/fhir/ValueSet/c80-facilitycodes" - }, - "mapping": [ - { - "identity": "fhircomposition", - "map": "usually from a mapping to a local ValueSet" - }, - { - "identity": "rim", - "map": ".participation[typeCode=\"LOC\"].role[classCode=\"DSDLOC\"].code" - }, - { - "identity": "xds", - "map": "DocumentEntry.healthcareFacilityTypeCode" - }, - { - "identity": "cda", - "map": "usually a mapping to a local ValueSet. Must be consistent with /clinicalDocument/code" - } - ] - }, - { - "id": "DocumentReference.context.practiceSetting", - "path": "DocumentReference.context.practiceSetting", - "short": "Additional details about where the content was created (e.g. clinical specialty)", - "definition": "This property may convey specifics about the practice setting where the content was created, often reflecting the clinical specialty.", - "comment": "This element should be based on a coarse classification system for the class of specialty practice. Recommend the use of the classification system for Practice Setting, such as that described by the Subject Matter Domain in LOINC.", - "requirements": "This is an important piece of metadata that providers often rely upon to quickly sort and/or filter out to find specific content.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.context.practiceSetting", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "DocumentC80PracticeSetting" - } - ], - "strength": "example", - "description": "Additional details about where the content was created (e.g. clinical specialty).", - "valueSet": "http://hl7.org/fhir/ValueSet/c80-practice-codes" - }, - "mapping": [ - { - "identity": "fhircomposition", - "map": "usually from a mapping to a local ValueSet" - }, - { - "identity": "rim", - "map": ".participation[typeCode=\"LOC\"].role[classCode=\"DSDLOC\"].code" - }, - { - "identity": "xds", - "map": "DocumentEntry.practiceSettingCode" - }, - { - "identity": "cda", - "map": "usually from a mapping to a local ValueSet" - } - ] - }, - { - "id": "DocumentReference.context.sourcePatientInfo", - "path": "DocumentReference.context.sourcePatientInfo", - "short": "Patient demographics from source", - "definition": "The Patient Information as known when the document was published. May be a reference to a version specific, or contained.", - "min": 0, - "max": "1", - "base": { - "path": "DocumentReference.context.sourcePatientInfo", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Patient" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Composition.subject" - }, - { - "identity": "rim", - "map": ".participation[typeCode=\"SBJ\"].role[typeCode=\"PAT\"]" - }, - { - "identity": "xds", - "map": "DocumentEntry.sourcePatientInfo, DocumentEntry.sourcePatientId" - }, - { - "identity": "cda", - "map": "ClinicalDocument/recordTarget/" - } - ] - }, - { - "id": "DocumentReference.context.related", - "path": "DocumentReference.context.related", - "short": "Related identifiers or resources", - "definition": "Related identifiers or resources associated with the DocumentReference.", - "comment": "May be identifiers or resources that caused the DocumentReference or referenced Document to be created.", - "min": 0, - "max": "*", - "base": { - "path": "DocumentReference.context.related", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Task" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "fhircomposition", - "map": "Composition.event.detail" - }, - { - "identity": "rim", - "map": "./outboundRelationship[typeCode=\"PERT\" and isNormalActRelationship()] / target[isNormalAct]" - }, - { - "identity": "xds", - "map": "DocumentEntry.referenceIdList" - }, - { - "identity": "cda", - "map": "ClinicalDocument/relatedDocument" - } - ] - } - ] - }, - "differential": { - "element": [ - { - "id": "DocumentReference", - "path": "DocumentReference" - }, - { - "id": "DocumentReference.subject", - "path": "DocumentReference.subject", - "min": 1 - }, - { - "id": "DocumentReference.custodian", - "path": "DocumentReference.custodian", - "min": 1 - }, - { - "id": "DocumentReference.content.attachment", - "path": "DocumentReference.content.attachment", - "type": [ - { - "code": "Attachment", - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment" - ] - } - ] - }, - { - "id": "DocumentReference.context", - "path": "DocumentReference.context", - "min": 1 - }, - { - "id": "DocumentReference.context.related", - "path": "DocumentReference.context.related", - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Task" - ] - } - ] - } - ] - } +{ + "resourceType" : "StructureDefinition", + "id" : "ncpi-research-document-reference", + "text" : { + "status" : "extensions", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference\">DocumentReference</a><a name=\"DocumentReference\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/documentreference.html\">DocumentReference</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">A reference to a document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.subject\">subject</a><a name=\"DocumentReference.subject\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/patient.html\">Patient</a> | <a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/practitioner.html\">Practitioner</a> | <a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/group.html\">Group</a> | <a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/device.html\">Device</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Who/what is the subject of the document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.custodian\">custodian</a><a name=\"DocumentReference.custodian\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/organization.html\">Organization</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Organization which maintains the document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.content\">content</a><a name=\"DocumentReference.content\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck100.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_datatype.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Data Type\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.content.attachment\">attachment</a><a name=\"DocumentReference.content.attachment\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"StructureDefinition-ncpi-drs-attachment.html\" title=\"Attachment\">DRSAttachment</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Content in a format defined elsewhere</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck01.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.context\">context</a><a name=\"DocumentReference.context\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#BackboneElement\">BackboneElement</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Clinical context of document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.context.related\">related</a><a name=\"DocumentReference.context.related\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/task.html\">Task</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Related identifiers or resources</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" + }, + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", + "valueString" : "Foundation.Documents" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", + "valueCode" : "not-classified" + }], + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-document-reference", + "version" : "0.2.0", + "name" : "ResearchDocumentReference", + "title" : "Research Document Reference", + "status" : "draft", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "A FHIR Document Reference created by an analysis task. Context.related = Task ", + "fhirVersion" : "4.0.1", + "mapping" : [{ + "identity" : "workflow", + "uri" : "http://hl7.org/fhir/workflow", + "name" : "Workflow Pattern" + }, + { + "identity" : "fhircomposition", + "uri" : "http://hl7.org/fhir/composition", + "name" : "FHIR Composition" + }, + { + "identity" : "rim", + "uri" : "http://hl7.org/v3", + "name" : "RIM Mapping" + }, + { + "identity" : "cda", + "uri" : "http://hl7.org/v3/cda", + "name" : "CDA (R2)" + }, + { + "identity" : "w5", + "uri" : "http://hl7.org/fhir/fivews", + "name" : "FiveWs Pattern Mapping" + }, + { + "identity" : "v2", + "uri" : "http://hl7.org/v2", + "name" : "HL7 v2 Mapping" + }, + { + "identity" : "xds", + "uri" : "http://ihe.net/xds", + "name" : "XDS metadata equivalent" + }], + "kind" : "resource", + "abstract" : false, + "type" : "DocumentReference", + "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/DocumentReference", + "derivation" : "constraint", + "snapshot" : { + "element" : [{ + "id" : "DocumentReference", + "path" : "DocumentReference", + "short" : "A reference to a document", + "definition" : "A reference to a document of any kind for any purpose. Provides metadata about the document so that the document can be discovered and managed. The scope of a document is any seralized object with a mime-type, so includes formal patient centric documents (CDA), cliical notes, scanned paper, and non-patient specific documents like policy text.", + "comment" : "Usually, this is used for documents other than those defined by FHIR.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "DocumentReference", + "min" : 0, + "max" : "*" + }, + "constraint" : [{ + "key" : "dom-2", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL NOT contain nested Resources", + "expression" : "contained.contained.empty()", + "xpath" : "not(parent::f:contained and f:contained)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-3", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", + "expression" : "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", + "xpath" : "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-4", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", + "expression" : "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-5", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a security label", + "expression" : "contained.meta.security.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:security))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", + "valueBoolean" : true + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", + "valueMarkdown" : "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." + }], + "key" : "dom-6", + "severity" : "warning", + "human" : "A resource should have narrative for robust management", + "expression" : "text.`div`.exists()", + "xpath" : "exists(f:text/h:div)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Entity. Role, or Act" + }, + { + "identity" : "workflow", + "map" : "Event" + }, + { + "identity" : "fhircomposition", + "map" : "when describing a Composition" + }, + { + "identity" : "rim", + "map" : "Document[classCode=\"DOC\" and moodCode=\"EVN\"]" + }, + { + "identity" : "cda", + "map" : "when describing a CDA" + }] + }, + { + "id" : "DocumentReference.id", + "path" : "DocumentReference.id", + "short" : "Logical id of this artifact", + "definition" : "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", + "comment" : "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "id" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "DocumentReference.meta", + "path" : "DocumentReference.meta", + "short" : "Metadata about the resource", + "definition" : "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.meta", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Meta" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "DocumentReference.implicitRules", + "path" : "DocumentReference.implicitRules", + "short" : "A set of rules under which this content was created", + "definition" : "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", + "comment" : "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.implicitRules", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", + "isSummary" : true + }, + { + "id" : "DocumentReference.language", + "path" : "DocumentReference.language", + "short" : "Language of the resource content", + "definition" : "The base language in which the resource is written.", + "comment" : "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.language", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", + "valueCanonical" : "http://hl7.org/fhir/ValueSet/all-languages" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "Language" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "preferred", + "description" : "A human language.", + "valueSet" : "http://hl7.org/fhir/ValueSet/languages" + } + }, + { + "id" : "DocumentReference.text", + "path" : "DocumentReference.text", + "short" : "Text summary of the resource, for human interpretation", + "definition" : "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", + "comment" : "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", + "alias" : ["narrative", + "html", + "xhtml", + "display"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "DomainResource.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Narrative" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Act.text?" + }] + }, + { + "id" : "DocumentReference.contained", + "path" : "DocumentReference.contained", + "short" : "Contained, inline Resources", + "definition" : "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", + "comment" : "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", + "alias" : ["inline resources", + "anonymous resources", + "contained resources"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.contained", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Resource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "DocumentReference.extension", + "path" : "DocumentReference.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "DocumentReference.modifierExtension", + "path" : "DocumentReference.modifierExtension", + "short" : "Extensions that cannot be ignored", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "DocumentReference.masterIdentifier", + "path" : "DocumentReference.masterIdentifier", + "short" : "Master Version Specific Identifier", + "definition" : "Document identifier as assigned by the source of the document. This identifier is specific to this version of the document. This unique identifier may be used elsewhere to identify this version of the document.", + "comment" : "CDA Document Id extension and root.", + "requirements" : "The structure and format of this Id shall be consistent with the specification corresponding to the formatCode attribute. (e.g. for a DICOM standard document a 64-character numeric UID, for an HL7 CDA format a serialization of the CDA Document Id extension and root in the form \"oid^extension\", where OID is a 64 digits max, and the Id is a 16 UTF-8 char max. If the OID is coded without the extension then the '^' character shall not be included.).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.masterIdentifier", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Identifier" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.identifier" + }, + { + "identity" : "w5", + "map" : "FiveWs.identifier" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.identifier" + }, + { + "identity" : "v2", + "map" : "TXA-12" + }, + { + "identity" : "rim", + "map" : ".id" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.uniqueId" + }, + { + "identity" : "cda", + "map" : "ClinicalDocument/id" + }] + }, + { + "id" : "DocumentReference.identifier", + "path" : "DocumentReference.identifier", + "short" : "Other identifiers for the document", + "definition" : "Other identifiers associated with the document, including version independent identifiers.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "DocumentReference.identifier", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Identifier" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.identifier" + }, + { + "identity" : "w5", + "map" : "FiveWs.identifier" + }, + { + "identity" : "v2", + "map" : "TXA-16?" + }, + { + "identity" : "rim", + "map" : ".id / .setId" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.entryUUID" + }] + }, + { + "id" : "DocumentReference.status", + "path" : "DocumentReference.status", + "short" : "current | superseded | entered-in-error", + "definition" : "The status of this document reference.", + "comment" : "This is the status of the DocumentReference object, which might be independent from the docStatus element.\n\nThis element is labeled as a modifier because the status contains the codes that mark the document or reference as not currently valid.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "DocumentReference.status", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labelled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid", + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "DocumentReferenceStatus" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "required", + "description" : "The status of the document reference.", + "valueSet" : "http://hl7.org/fhir/ValueSet/document-reference-status|4.0.1" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.status" + }, + { + "identity" : "w5", + "map" : "FiveWs.status" + }, + { + "identity" : "v2", + "map" : "TXA-19" + }, + { + "identity" : "rim", + "map" : "interim: .completionCode=\"IN\" & ./statusCode[isNormalDatatype()]=\"active\"; final: .completionCode=\"AU\" && ./statusCode[isNormalDatatype()]=\"complete\" and not(./inboundRelationship[typeCode=\"SUBJ\" and isNormalActRelationship()]/source[subsumesCode(\"ActClass#CACT\") and moodCode=\"EVN\" and domainMember(\"ReviseDocument\", code) and isNormalAct()]); amended: .completionCode=\"AU\" && ./statusCode[isNormalDatatype()]=\"complete\" and ./inboundRelationship[typeCode=\"SUBJ\" and isNormalActRelationship()]/source[subsumesCode(\"ActClass#CACT\") and moodCode=\"EVN\" and domainMember(\"ReviseDocument\", code) and isNormalAct() and statusCode=\"completed\"]; withdrawn : .completionCode=NI && ./statusCode[isNormalDatatype()]=\"obsolete\"" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.availabilityStatus" + }] + }, + { + "id" : "DocumentReference.docStatus", + "path" : "DocumentReference.docStatus", + "short" : "preliminary | final | amended | entered-in-error", + "definition" : "The status of the underlying document.", + "comment" : "The document that is pointed to might be in various lifecycle states.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.docStatus", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ReferredDocumentStatus" + }], + "strength" : "required", + "description" : "Status of the underlying document.", + "valueSet" : "http://hl7.org/fhir/ValueSet/composition-status|4.0.1" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.status" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.status" + }, + { + "identity" : "v2", + "map" : "TXA-17" + }, + { + "identity" : "rim", + "map" : ".statusCode" + }] + }, + { + "id" : "DocumentReference.type", + "path" : "DocumentReference.type", + "short" : "Kind of document (LOINC if possible)", + "definition" : "Specifies the particular kind of document referenced (e.g. History and Physical, Discharge Summary, Progress Note). This usually equates to the purpose of making the document referenced.", + "comment" : "Key metadata element describing the document that describes he exact type of document. Helps humans to assess whether the document is of interest when viewing a list of documents.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.type", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "DocumentC80Type" + }], + "strength" : "preferred", + "description" : "Precise type of clinical document.", + "valueSet" : "http://hl7.org/fhir/ValueSet/c80-doc-typecodes" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.code" + }, + { + "identity" : "w5", + "map" : "FiveWs.class" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.type" + }, + { + "identity" : "v2", + "map" : "TXA-2" + }, + { + "identity" : "rim", + "map" : "./code" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.type" + }, + { + "identity" : "cda", + "map" : "ClinicalDocument/code/@code \n\nThe typeCode should be mapped from the ClinicalDocument/code element to a set of document type codes configured in the affinity domain. One suggested coding system to use for typeCode is LOINC, in which case the mapping step can be omitted." + }] + }, + { + "id" : "DocumentReference.category", + "path" : "DocumentReference.category", + "short" : "Categorization of document", + "definition" : "A categorization for the type of document referenced - helps for indexing and searching. This may be implied by or derived from the code specified in the DocumentReference.type.", + "comment" : "Key metadata element describing the the category or classification of the document. This is a broader perspective that groups similar documents based on how they would be used. This is a primary key used in searching.", + "alias" : ["claxs"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DocumentReference.category", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "DocumentC80Class" + }], + "strength" : "example", + "description" : "High-level kind of a clinical document at a macro level.", + "valueSet" : "http://hl7.org/fhir/ValueSet/document-classcodes" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.class" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.class" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=\"COMP].target[classCode=\"LIST\", moodCode=\"EVN\"].code" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.class" + }, + { + "identity" : "cda", + "map" : "Derived from a mapping of /ClinicalDocument/code/@code to an Affinity Domain specified coded value to use and coding system. Affinity Domains are encouraged to use the appropriate value for Type of Service, based on the LOINC Type of Service (see Page 53 of the LOINC User's Manual). Must be consistent with /ClinicalDocument/code/@code" + }] + }, + { + "id" : "DocumentReference.subject", + "path" : "DocumentReference.subject", + "short" : "Who/what is the subject of the document", + "definition" : "Who or what the document is about. The document can be about a person, (patient or healthcare practitioner), a device (e.g. a machine) or even a group of subjects (such as a document about a herd of farm animals, or a set of patients that share a common exposure).", + "min" : 1, + "max" : "1", + "base" : { + "path" : "DocumentReference.subject", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Patient", + "http://hl7.org/fhir/StructureDefinition/Practitioner", + "http://hl7.org/fhir/StructureDefinition/Group", + "http://hl7.org/fhir/StructureDefinition/Device"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.subject" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject[x]" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.subject" + }, + { + "identity" : "v2", + "map" : "PID-3 (No standard way to define a Practitioner or Group subject in HL7 v2 MDM message)" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=\"SBJ\"].role[typeCode=\"PAT\"]" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.patientId" + }, + { + "identity" : "cda", + "map" : "ClinicalDocument/recordTarget/" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject" + }] + }, + { + "id" : "DocumentReference.date", + "path" : "DocumentReference.date", + "short" : "When this document reference was created", + "definition" : "When the document reference was created.", + "comment" : "Referencing/indexing time is used for tracking, organizing versions and searching.", + "alias" : ["indexed"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.date", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "instant" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.occurrence[x]" + }, + { + "identity" : "w5", + "map" : "FiveWs.recorded" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.date" + }, + { + "identity" : "rim", + "map" : ".availabilityTime[type=\"TS\"]" + }] + }, + { + "id" : "DocumentReference.author", + "path" : "DocumentReference.author", + "short" : "Who and/or what authored the document", + "definition" : "Identifies who is responsible for adding the information to the document.", + "comment" : "Not necessarily who did the actual data entry (i.e. typist) or who was the source (informant).", + "min" : 0, + "max" : "*", + "base" : { + "path" : "DocumentReference.author", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Practitioner", + "http://hl7.org/fhir/StructureDefinition/PractitionerRole", + "http://hl7.org/fhir/StructureDefinition/Organization", + "http://hl7.org/fhir/StructureDefinition/Device", + "http://hl7.org/fhir/StructureDefinition/Patient", + "http://hl7.org/fhir/StructureDefinition/RelatedPerson"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.performer.actor" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.author" + }, + { + "identity" : "v2", + "map" : "TXA-9 (No standard way to indicate a Device in HL7 v2 MDM message)" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=\"AUT\"].role[classCode=\"ASSIGNED\"]" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.author" + }, + { + "identity" : "cda", + "map" : "ClinicalDocument/author" + }] + }, + { + "id" : "DocumentReference.authenticator", + "path" : "DocumentReference.authenticator", + "short" : "Who/what authenticated the document", + "definition" : "Which person or organization authenticates that this document is valid.", + "comment" : "Represents a participant within the author institution who has legally authenticated or attested the document. Legal authentication implies that a document has been signed manually or electronically by the legal Authenticator.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.authenticator", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Practitioner", + "http://hl7.org/fhir/StructureDefinition/PractitionerRole", + "http://hl7.org/fhir/StructureDefinition/Organization"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.performer.actor" + }, + { + "identity" : "w5", + "map" : "FiveWs.witness" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.attester" + }, + { + "identity" : "v2", + "map" : "TXA-10" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=\"AUTHEN\"].role[classCode=\"ASSIGNED\"]" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.legalAuthenticator" + }, + { + "identity" : "cda", + "map" : "ClinicalDocument/legalAuthenticator" + }] + }, + { + "id" : "DocumentReference.custodian", + "path" : "DocumentReference.custodian", + "short" : "Organization which maintains the document", + "definition" : "Identifies the organization or group who is responsible for ongoing maintenance of and access to the document.", + "comment" : "Identifies the logical organization (software system, vendor, or department) to go to find the current version, where to report issues, etc. This is different from the physical location (URL, disk drive, or server) of the document, which is the technical location of the document, which host may be delegated to the management of some other organization.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "DocumentReference.custodian", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Organization"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.performer.actor" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.custodian" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=\"RCV\"].role[classCode=\"CUST\"].scoper[classCode=\"ORG\" and determinerCode=\"INST\"]" + }] + }, + { + "id" : "DocumentReference.relatesTo", + "path" : "DocumentReference.relatesTo", + "short" : "Relationships to other documents", + "definition" : "Relationships that this document has with other document references that already exist.", + "comment" : "This element is labeled as a modifier because documents that append to other documents are incomplete on their own.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "DocumentReference.relatesTo", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Composition.relatesTo" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship" + }, + { + "identity" : "xds", + "map" : "DocumentEntry Associations" + }] + }, + { + "id" : "DocumentReference.relatesTo.id", + "path" : "DocumentReference.relatesTo.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "DocumentReference.relatesTo.extension", + "path" : "DocumentReference.relatesTo.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "DocumentReference.relatesTo.modifierExtension", + "path" : "DocumentReference.relatesTo.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "DocumentReference.relatesTo.code", + "path" : "DocumentReference.relatesTo.code", + "short" : "replaces | transforms | signs | appends", + "definition" : "The type of relationship that this document has with anther document.", + "comment" : "If this document appends another document, then the document cannot be fully understood without also accessing the referenced document.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "DocumentReference.relatesTo.code", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "DocumentRelationshipType" + }], + "strength" : "required", + "description" : "The type of relationship between documents.", + "valueSet" : "http://hl7.org/fhir/ValueSet/document-relationship-type|4.0.1" + }, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Composition.relatesTo.code" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship.typeCode" + }, + { + "identity" : "xds", + "map" : "DocumentEntry Associations type" + }] + }, + { + "id" : "DocumentReference.relatesTo.target", + "path" : "DocumentReference.relatesTo.target", + "short" : "Target of the relationship", + "definition" : "The target document of this relationship.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "DocumentReference.relatesTo.target", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/DocumentReference"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Composition.relatesTo.target" + }, + { + "identity" : "rim", + "map" : ".target[classCode=\"DOC\", moodCode=\"EVN\"].id" + }, + { + "identity" : "xds", + "map" : "DocumentEntry Associations reference" + }] + }, + { + "id" : "DocumentReference.description", + "path" : "DocumentReference.description", + "short" : "Human-readable description", + "definition" : "Human-readable description of the source document.", + "comment" : "What the document is about, a terse summary of the document.", + "requirements" : "Helps humans to assess whether the document is of interest.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.description", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "TXA-25" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=\"SUBJ\"].target.text" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.comments" + }] + }, + { + "id" : "DocumentReference.securityLabel", + "path" : "DocumentReference.securityLabel", + "short" : "Document security-tags", + "definition" : "A set of Security-Tag codes specifying the level of privacy/security of the Document. Note that DocumentReference.meta.security contains the security labels of the \"reference\" to the document, while DocumentReference.securityLabel contains a snapshot of the security labels on the document the reference refers to.", + "comment" : "The confidentiality codes can carry multiple vocabulary items. HL7 has developed an understanding of security and privacy tags that might be desirable in a Document Sharing environment, called HL7 Healthcare Privacy and Security Classification System (HCS). The following specification is recommended but not mandated, as the vocabulary bindings are an administrative domain responsibility. The use of this method is up to the policy domain such as the XDS Affinity Domain or other Trust Domain where all parties including sender and recipients are trusted to appropriately tag and enforce. \n\nIn the HL7 Healthcare Privacy and Security Classification (HCS) there are code systems specific to Confidentiality, Sensitivity, Integrity, and Handling Caveats. Some values would come from a local vocabulary as they are related to workflow roles and special projects.", + "requirements" : "Use of the Health Care Privacy/Security Classification (HCS) system of security-tag use is recommended.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "DocumentReference.securityLabel", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "SecurityLabels" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "extensible", + "description" : "Security Labels from the Healthcare Privacy and Security Classification System.", + "valueSet" : "http://hl7.org/fhir/ValueSet/security-labels" + }, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Composition.confidentiality, Composition.meta.security" + }, + { + "identity" : "v2", + "map" : "TXA-18" + }, + { + "identity" : "rim", + "map" : ".confidentialityCode" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.confidentialityCode" + }, + { + "identity" : "cda", + "map" : "ClinicalDocument/confidentialityCode/@code" + }] + }, + { + "id" : "DocumentReference.content", + "path" : "DocumentReference.content", + "short" : "Document referenced", + "definition" : "The document and format referenced. There may be multiple content element repetitions, each with a different format.", + "min" : 1, + "max" : "*", + "base" : { + "path" : "DocumentReference.content", + "min" : 1, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Bundle(Composition+*)" + }, + { + "identity" : "rim", + "map" : "document.text" + }] + }, + { + "id" : "DocumentReference.content.id", + "path" : "DocumentReference.content.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "DocumentReference.content.extension", + "path" : "DocumentReference.content.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "DocumentReference.content.modifierExtension", + "path" : "DocumentReference.content.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "DocumentReference.content.attachment", + "path" : "DocumentReference.content.attachment", + "short" : "Content in a format defined elsewhere", + "definition" : "For referring to data content defined in other formats.", + "comment" : "When providing a summary view (for example with Observation.value[x]) Attachment should be represented with a brief display text such as \"Signed Procedure Consent\".", + "min" : 1, + "max" : "1", + "base" : { + "path" : "DocumentReference.content.attachment", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "Attachment", + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment"] + }], + "condition" : ["ele-1"], + "constraint" : [{ + "key" : "att-1", + "severity" : "error", + "human" : "If the Attachment has data, it SHALL have a contentType", + "expression" : "data.empty() or contentType.exists()", + "xpath" : "not(exists(f:data)) or exists(f:contentType)", + "source" : "http://hl7.org/fhir/StructureDefinition/Attachment" + }, + { + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "must-be-drs-uri", + "severity" : "error", + "human" : "attachment.url must start with ^drs://. A drs:// hostname-based URI, as defined in the DRS documentation, that tells clients how to access this object. The intent of this field is to make DRS objects self-contained, and therefore easier for clients to store and pass around. For example, if you arrive at this DRS JSON by resolving a compact identifier-based DRS URI, the `self_uri` presents you with a hostname and properly encoded DRS ID for use in subsequent `access` endpoint calls.", + "expression" : "$this.url.matches('^drs://.*')", + "source" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment" + }], + "isModifier" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }, + { + "identity" : "v2", + "map" : "ED/RP" + }, + { + "identity" : "rim", + "map" : "ED" + }] + }, + { + "id" : "DocumentReference.content.format", + "path" : "DocumentReference.content.format", + "short" : "Format/content rules for the document", + "definition" : "An identifier of the document encoding, structure, and template that the document conforms to beyond the base format indicated in the mimeType.", + "comment" : "Note that while IHE mostly issues URNs for format types, not all documents can be identified by a URI.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.content.format", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Coding" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "DocumentFormat" + }], + "strength" : "preferred", + "description" : "Document Format Codes.", + "valueSet" : "http://hl7.org/fhir/ValueSet/formatcodes" + }, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Composition.meta.profile" + }, + { + "identity" : "rim", + "map" : "document.text" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.formatCode" + }, + { + "identity" : "cda", + "map" : "derived from the IHE Profile or Implementation Guide templateID" + }] + }, + { + "id" : "DocumentReference.context", + "path" : "DocumentReference.context", + "short" : "Clinical context of document", + "definition" : "The clinical context in which the document was prepared.", + "comment" : "These values are primarily added to help with searching for interesting/relevant documents.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "DocumentReference.context", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "outboundRelationship[typeCode=\"SUBJ\"].target[classCode<'ACT']" + }] + }, + { + "id" : "DocumentReference.context.id", + "path" : "DocumentReference.context.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "DocumentReference.context.extension", + "path" : "DocumentReference.context.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "DocumentReference.context.modifierExtension", + "path" : "DocumentReference.context.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "DocumentReference.context.encounter", + "path" : "DocumentReference.context.encounter", + "short" : "Context of the document content", + "definition" : "Describes the clinical encounter or type of care that the document content is associated with.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "DocumentReference.context.encounter", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Encounter", + "http://hl7.org/fhir/StructureDefinition/EpisodeOfCare"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.context" + }, + { + "identity" : "w5", + "map" : "FiveWs.context" + }, + { + "identity" : "fhircomposition", + "map" : "Composition.encounter" + }, + { + "identity" : "rim", + "map" : "unique(highest(./outboundRelationship[typeCode=\"SUBJ\" and isNormalActRelationship()], priorityNumber)/target[moodCode=\"EVN\" and classCode=(\"ENC\", \"PCPR\") and isNormalAct])" + }] + }, + { + "id" : "DocumentReference.context.event", + "path" : "DocumentReference.context.event", + "short" : "Main clinical acts documented", + "definition" : "This list of codes represents the main clinical acts, such as a colonoscopy or an appendectomy, being documented. In some cases, the event is inherent in the type Code, such as a \"History and Physical Report\" in which the procedure being documented is necessarily a \"History and Physical\" act.", + "comment" : "An event can further specialize the act inherent in the type, such as where it is simply \"Procedure Report\" and the procedure was a \"colonoscopy\". If one or more event codes are included, they shall not conflict with the values inherent in the class or type elements as such a conflict would create an ambiguous situation.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "DocumentReference.context.event", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "DocumentEventType" + }], + "strength" : "example", + "description" : "This list of codes represents the main clinical acts being documented.", + "valueSet" : "http://terminology.hl7.org/ValueSet/v3-ActCode" + }, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Composition.event.code" + }, + { + "identity" : "rim", + "map" : ".code" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.eventCodeList" + }] + }, + { + "id" : "DocumentReference.context.period", + "path" : "DocumentReference.context.period", + "short" : "Time of service that is being documented", + "definition" : "The time period over which the service that is described by the document was provided.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.context.period", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Period" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Composition.event.period" + }, + { + "identity" : "rim", + "map" : ".effectiveTime" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.serviceStartTime, DocumentEntry.serviceStopTime" + }, + { + "identity" : "cda", + "map" : "ClinicalDocument/documentationOf/\nserviceEvent/effectiveTime/low/\n@value --> ClinicalDocument/documentationOf/\nserviceEvent/effectiveTime/high/\n@value" + }] + }, + { + "id" : "DocumentReference.context.facilityType", + "path" : "DocumentReference.context.facilityType", + "short" : "Kind of facility where patient was seen", + "definition" : "The kind of facility where the patient was seen.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.context.facilityType", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "DocumentC80FacilityType" + }], + "strength" : "example", + "description" : "XDS Facility Type.", + "valueSet" : "http://hl7.org/fhir/ValueSet/c80-facilitycodes" + }, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "usually from a mapping to a local ValueSet" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=\"LOC\"].role[classCode=\"DSDLOC\"].code" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.healthcareFacilityTypeCode" + }, + { + "identity" : "cda", + "map" : "usually a mapping to a local ValueSet. Must be consistent with /clinicalDocument/code" + }] + }, + { + "id" : "DocumentReference.context.practiceSetting", + "path" : "DocumentReference.context.practiceSetting", + "short" : "Additional details about where the content was created (e.g. clinical specialty)", + "definition" : "This property may convey specifics about the practice setting where the content was created, often reflecting the clinical specialty.", + "comment" : "This element should be based on a coarse classification system for the class of specialty practice. Recommend the use of the classification system for Practice Setting, such as that described by the Subject Matter Domain in LOINC.", + "requirements" : "This is an important piece of metadata that providers often rely upon to quickly sort and/or filter out to find specific content.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.context.practiceSetting", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "DocumentC80PracticeSetting" + }], + "strength" : "example", + "description" : "Additional details about where the content was created (e.g. clinical specialty).", + "valueSet" : "http://hl7.org/fhir/ValueSet/c80-practice-codes" + }, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "usually from a mapping to a local ValueSet" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=\"LOC\"].role[classCode=\"DSDLOC\"].code" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.practiceSettingCode" + }, + { + "identity" : "cda", + "map" : "usually from a mapping to a local ValueSet" + }] + }, + { + "id" : "DocumentReference.context.sourcePatientInfo", + "path" : "DocumentReference.context.sourcePatientInfo", + "short" : "Patient demographics from source", + "definition" : "The Patient Information as known when the document was published. May be a reference to a version specific, or contained.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "DocumentReference.context.sourcePatientInfo", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Patient"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Composition.subject" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=\"SBJ\"].role[typeCode=\"PAT\"]" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.sourcePatientInfo, DocumentEntry.sourcePatientId" + }, + { + "identity" : "cda", + "map" : "ClinicalDocument/recordTarget/" + }] + }, + { + "id" : "DocumentReference.context.related", + "path" : "DocumentReference.context.related", + "short" : "Related identifiers or resources", + "definition" : "Related identifiers or resources associated with the DocumentReference.", + "comment" : "May be identifiers or resources that caused the DocumentReference or referenced Document to be created.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "DocumentReference.context.related", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Task"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "fhircomposition", + "map" : "Composition.event.detail" + }, + { + "identity" : "rim", + "map" : "./outboundRelationship[typeCode=\"PERT\" and isNormalActRelationship()] / target[isNormalAct]" + }, + { + "identity" : "xds", + "map" : "DocumentEntry.referenceIdList" + }, + { + "identity" : "cda", + "map" : "ClinicalDocument/relatedDocument" + }] + }] + }, + "differential" : { + "element" : [{ + "id" : "DocumentReference", + "path" : "DocumentReference" + }, + { + "id" : "DocumentReference.subject", + "path" : "DocumentReference.subject", + "min" : 1 + }, + { + "id" : "DocumentReference.custodian", + "path" : "DocumentReference.custodian", + "min" : 1 + }, + { + "id" : "DocumentReference.content.attachment", + "path" : "DocumentReference.content.attachment", + "type" : [{ + "code" : "Attachment", + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment"] + }] + }, + { + "id" : "DocumentReference.context", + "path" : "DocumentReference.context", + "min" : 1 + }, + { + "id" : "DocumentReference.context.related", + "path" : "DocumentReference.context.related", + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Task"] + }] + }] + } } \ No newline at end of file diff --git a/StructureDefinition-ncpi-research-document-reference.profile.history.html b/StructureDefinition-ncpi-research-document-reference.profile.history.html index 357c4151..b7640916 100644 --- a/StructureDefinition-ncpi-research-document-reference.profile.history.html +++ b/StructureDefinition-ncpi-research-document-reference.profile.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -298,7 +298,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Change History</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -356,7 +356,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-research-document-reference.profile.json.html b/StructureDefinition-ncpi-research-document-reference.profile.json.html index 94a5ba62..2fbe9a0f 100644 --- a/StructureDefinition-ncpi-research-document-reference.profile.json.html +++ b/StructureDefinition-ncpi-research-document-reference.profile.json.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - JSON Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -342,7 +342,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - JSON Profile</h2> "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a>" : "ResearchDocumentReference", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a>" : "Research Document Reference", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a>" : "draft", - "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>" : [ { @@ -2853,7 +2853,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - JSON Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-research-document-reference.profile.ttl.html b/StructureDefinition-ncpi-research-document-reference.profile.ttl.html index 00612a20..491e9e30 100644 --- a/StructureDefinition-ncpi-research-document-reference.profile.ttl.html +++ b/StructureDefinition-ncpi-research-document-reference.profile.ttl.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - TTL Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -329,11 +329,11 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - TTL Profile</h2> a fhir:StructureDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-research-document-reference"]; + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-research-document-reference"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description &amp; Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference\">DocumentReference</a><a name=\"DocumentReference\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/documentreference.html\">DocumentReference</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">A reference to a document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.subject\">subject</a><a name=\"DocumentReference.subject\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/patient.html\">Patient</a> | <a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/practitioner.html\">Practitioner</a> | <a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/group.html\">Group</a> | <a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/device.html\">Device</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Who/what is the subject of the document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.custodian\">custodian</a><a name=\"DocumentReference.custodian\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/organization.html\">Organization</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Organization which maintains the document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.content\">content</a><a name=\"DocumentReference.content\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck100.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_datatype.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Data Type\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.content.attachment\">attachment</a><a name=\"DocumentReference.content.attachment\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"StructureDefinition-ncpi-drs-attachment.html\" title=\"Attachment\">DRSAttachment</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Content in a format defined elsewhere</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck01.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.context\">context</a><a name=\"DocumentReference.context\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#BackboneElement\">BackboneElement</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Clinical context of document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.context.related\">related</a><a name=\"DocumentReference.context.related\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/task.html\">Task</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Related identifiers or resources</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -342,14 +342,14 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "not-classified" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-document-reference"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ResearchDocumentReference"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Research Document Reference"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-document-reference"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ResearchDocumentReference"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Research Document Reference"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">fhir:StructureDefinition.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -365,9 +365,9 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "A FHIR Document Reference created by an analysis task. Context.related = Task "]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "A FHIR Document Reference created by an analysis task. Context.related = Task "]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping">fhir:StructureDefinition.mapping</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "workflow" ]; @@ -403,15 +403,15 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "xds" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.uri">fhir:StructureDefinition.mapping.uri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://ihe.net/xds" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.name">fhir:StructureDefinition.mapping.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "XDS metadata equivalent" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "DocumentReference"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "DocumentReference"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.baseDefinition">fhir:StructureDefinition.baseDefinition</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/DocumentReference"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/DocumentReference> - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot">fhir:StructureDefinition.snapshot</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot.element">fhir:StructureDefinition.snapshot.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2438,7 +2438,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 3; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.identity">fhir:ElementDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "cda" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.map">fhir:ElementDefinition.mapping.map</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ClinicalDocument/relatedDocument" ] ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential">fhir:StructureDefinition.differential</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential.element">fhir:StructureDefinition.differential.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2476,7 +2476,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/Task"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/Task> ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -2538,7 +2538,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - TTL Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-research-document-reference.profile.xml.html b/StructureDefinition-ncpi-research-document-reference.profile.xml.html index 809bba00..623ffb97 100644 --- a/StructureDefinition-ncpi-research-document-reference.profile.xml.html +++ b/StructureDefinition-ncpi-research-document-reference.profile.xml.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - XML Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -348,7 +348,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - XML Profile</h2> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="ResearchDocumentReference"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Research Document Reference"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> - <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -2677,7 +2677,7 @@ <h2 id="root">Resource Profile: ResearchDocumentReference - XML Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-research-document-reference.ttl b/StructureDefinition-ncpi-research-document-reference.ttl index 8e50b143..3b5ca5a3 100644 --- a/StructureDefinition-ncpi-research-document-reference.ttl +++ b/StructureDefinition-ncpi-research-document-reference.ttl @@ -7,11 +7,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-document-reference> a fhir:StructureDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "ncpi-research-document-reference"]; + fhir:Resource.id [ fhir:value "ncpi-research-document-reference"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference\">DocumentReference</a><a name=\"DocumentReference\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/documentreference.html\">DocumentReference</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">A reference to a document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.subject\">subject</a><a name=\"DocumentReference.subject\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/patient.html\">Patient</a> | <a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/practitioner.html\">Practitioner</a> | <a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/group.html\">Group</a> | <a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/device.html\">Device</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Who/what is the subject of the document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.custodian\">custodian</a><a name=\"DocumentReference.custodian\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/organization.html\">Organization</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Organization which maintains the document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.content\">content</a><a name=\"DocumentReference.content\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck100.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_datatype.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Data Type\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.content.attachment\">attachment</a><a name=\"DocumentReference.content.attachment\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"StructureDefinition-ncpi-drs-attachment.html\" title=\"Attachment\">DRSAttachment</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Content in a format defined elsewhere</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck01.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.context\">context</a><a name=\"DocumentReference.context\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#BackboneElement\">BackboneElement</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Clinical context of document</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-document-reference-definitions.html#DocumentReference.context.related\">related</a><a name=\"DocumentReference.context.related\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/task.html\">Task</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Related identifiers or resources</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -20,14 +20,14 @@ fhir:index 1; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; fhir:Extension.valueCode [ fhir:value "not-classified" ] - ]; - fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-document-reference"]; - fhir:StructureDefinition.version [ fhir:value "0.2.0"]; - fhir:StructureDefinition.name [ fhir:value "ResearchDocumentReference"]; - fhir:StructureDefinition.title [ fhir:value "Research Document Reference"]; - fhir:StructureDefinition.status [ fhir:value "draft"]; - fhir:StructureDefinition.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-document-reference"]; # + fhir:StructureDefinition.version [ fhir:value "0.2.0"]; # + fhir:StructureDefinition.name [ fhir:value "ResearchDocumentReference"]; # + fhir:StructureDefinition.title [ fhir:value "Research Document Reference"]; # + fhir:StructureDefinition.status [ fhir:value "draft"]; # + fhir:StructureDefinition.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:StructureDefinition.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -45,9 +45,9 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:StructureDefinition.description [ fhir:value "A FHIR Document Reference created by an analysis task. Context.related = Task "]; - fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; + ]; # + fhir:StructureDefinition.description [ fhir:value "A FHIR Document Reference created by an analysis task. Context.related = Task "]; # + fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; # fhir:StructureDefinition.mapping [ fhir:index 0; fhir:StructureDefinition.mapping.identity [ fhir:value "workflow" ]; @@ -83,15 +83,15 @@ fhir:StructureDefinition.mapping.identity [ fhir:value "xds" ]; fhir:StructureDefinition.mapping.uri [ fhir:value "http://ihe.net/xds" ]; fhir:StructureDefinition.mapping.name [ fhir:value "XDS metadata equivalent" ] - ]; - fhir:StructureDefinition.kind [ fhir:value "resource"]; - fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; - fhir:StructureDefinition.type [ fhir:value "DocumentReference"]; + ]; # + fhir:StructureDefinition.kind [ fhir:value "resource"]; # + fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; # + fhir:StructureDefinition.type [ fhir:value "DocumentReference"]; # fhir:StructureDefinition.baseDefinition [ fhir:value "http://hl7.org/fhir/StructureDefinition/DocumentReference"; fhir:link <http://hl7.org/fhir/StructureDefinition/DocumentReference> - ]; - fhir:StructureDefinition.derivation [ fhir:value "constraint"]; + ]; # + fhir:StructureDefinition.derivation [ fhir:value "constraint"]; # fhir:StructureDefinition.snapshot [ fhir:StructureDefinition.snapshot.element [ fhir:index 0; @@ -2589,7 +2589,7 @@ fhir:ElementDefinition.mapping.map [ fhir:value "ClinicalDocument/relatedDocument" ] ] ] - ]; + ]; # fhir:StructureDefinition.differential [ fhir:StructureDefinition.differential.element [ fhir:index 0; @@ -2637,7 +2637,7 @@ ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/StructureDefinition-ncpi-research-document-reference.xlsx b/StructureDefinition-ncpi-research-document-reference.xlsx index ebd9c4b5..a9f7f618 100644 Binary files a/StructureDefinition-ncpi-research-document-reference.xlsx and b/StructureDefinition-ncpi-research-document-reference.xlsx differ diff --git a/StructureDefinition-ncpi-research-document-reference.xml b/StructureDefinition-ncpi-research-document-reference.xml index f4f0063a..a4654f8e 100644 --- a/StructureDefinition-ncpi-research-document-reference.xml +++ b/StructureDefinition-ncpi-research-document-reference.xml @@ -23,7 +23,7 @@ <name value="ResearchDocumentReference"/> <title value="Research Document Reference"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/StructureDefinition-ncpi-research-study-definitions.html b/StructureDefinition-ncpi-research-study-definitions.html index 95f483d1..3e11e8a3 100644 --- a/StructureDefinition-ncpi-research-study-definitions.html +++ b/StructureDefinition-ncpi-research-study-definitions.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Detailed Descriptions</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -327,7 +327,8 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Detailed Descriptions</h2> </ul> <a name="tabs-diff"> </a> <div id="tabs-diff"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_ResearchStudy"> </a><span style="color: grey">1.</span> <b>ResearchStudy</b><a href="#diff_ResearchStudy" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_ResearchStudy.category"> </a><span style="color: grey">2.</span> <b>ResearchStudy.category</b><a href="#diff_ResearchStudy.category" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..?</td></tr> @@ -336,13 +337,14 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Detailed Descriptions</h2> <tr><td>Pattern Value</td><td><valueCoding xmlns="http://hl7.org/fhir"><br/>  <system value="https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi"/><br/>  <code value="StudyCohort"/><br/>  <display value="Study Cohort"/><br/></valueCoding><br/></td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_ResearchStudy.enrollment"> </a><span style="color: grey">4.</span> <b>ResearchStudy.enrollment</b><a href="#diff_ResearchStudy.enrollment" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>*</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-study-group.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group">StudyGroup</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-study-group.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group">StudyGroup</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>)</td></tr> </table> </div> <a name="tabs-key"> </a> <div id="tabs-key"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="key_ResearchStudy"> </a><span style="color: grey">1.</span> <b>ResearchStudy</b><a href="#key_ResearchStudy" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><span style='color:DarkGray'><p>A process where a researcher or organization plans and then executes a series of steps intended to increase the field of healthcare-related knowledge. This includes studies of safety, efficacy, comparative effectiveness and other information about medications, devices, therapies and other interventional and investigative techniques. A ResearchStudy involves the gathering of information about human or animal subjects.</p> </span></td></tr> @@ -390,7 +392,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Detailed Descriptions</h2> <tr><td>Definition</td><td><span style='color:DarkGray'><p>Reference to a Group that defines the criteria for and quantity of subjects participating in the study. E.g. " 200 female Europeans between the ages of 20 and 45 with early onset diabetes".</p> </span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>*</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-study-group.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group">StudyGroup</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-study-group.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group">StudyGroup</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>)</td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td><span style='color:DarkGray'>patient</span></td></tr> <tr><td>Comments</td><td><span style='color:DarkGray'><p>The Group referenced should not generally enumerate specific subjects. Subjects will be linked to the study using the ResearchSubject resource.</p> </span></td></tr> @@ -401,12 +403,13 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Detailed Descriptions</h2> </div> <a name="tabs-snap"> </a> <div id="tabs-snap"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ResearchStudy"> </a><span style="color: grey">1.</span> <b>ResearchStudy</b><a href="#ResearchStudy" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>A process where a researcher or organization plans and then executes a series of steps intended to increase the field of healthcare-related knowledge. This includes studies of safety, efficacy, comparative effectiveness and other information about medications, devices, therapies and other interventional and investigative techniques. A ResearchStudy involves the gathering of information about human or animal subjects.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Clinical TrialStudy</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Clinical Trial, Study</td></tr> <tr><td>Comments</td><td><p>Need to make sure we encompass public health studies.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ResearchStudy.id"> </a><span style="color: grey">2.</span> <b>ResearchStudy.id</b><a href="#ResearchStudy.id" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -450,7 +453,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#Narrative">Narrative</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrativehtmlxhtmldisplay</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrative, html, xhtml, display</td></tr> <tr><td>Comments</td><td><p>Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a "text blob" or where text is additionally entered raw or narrated and encoded information is added later.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -460,7 +463,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/resource.html">Resource</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resourcesanonymous resourcescontained resources</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resources, anonymous resources, contained resources</td></tr> <tr><td>Comments</td><td><p>This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ResearchStudy.extension"> </a><span style="color: grey">8.</span> <b>ResearchStudy.extension</b><a href="#ResearchStudy.extension" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -468,7 +471,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -482,7 +485,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -508,14 +511,14 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The set of steps expected to be performed as part of the execution of the study.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/plandefinition.html" title="http://hl7.org/fhir/StructureDefinition/PlanDefinition">PlanDefinition</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/plandefinition.html" title="http://hl7.org/fhir/StructureDefinition/PlanDefinition">PlanDefinition</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ResearchStudy.partOf"> </a><span style="color: grey">13.</span> <b>ResearchStudy.partOf</b><a href="#ResearchStudy.partOf" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>A larger research study of which this particular study is a component or step.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/researchstudy.html" title="http://hl7.org/fhir/StructureDefinition/ResearchStudy">ResearchStudy</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/researchstudy.html" title="http://hl7.org/fhir/StructureDefinition/ResearchStudy">ResearchStudy</a>)</td></tr> <tr><td>Requirements</td><td><p>Allows breaking a study into components (e.g. by study site) each with their own PI, status, enrollment, etc.</p> </td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>container</td></tr> @@ -572,7 +575,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -664,7 +667,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Reference to a Group that defines the criteria for and quantity of subjects participating in the study. E.g. " 200 female Europeans between the ages of 20 and 45 with early onset diabetes".</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="StructureDefinition-study-group.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group">StudyGroup</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="StructureDefinition-study-group.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group">StudyGroup</a>)</td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>patient</td></tr> <tr><td>Comments</td><td><p>The Group referenced should not generally enumerate specific subjects. Subjects will be linked to the study using the ResearchSubject resource.</p> </td></tr> @@ -682,21 +685,21 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>An organization that initiates the investigation and is legally responsible for the study.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ResearchStudy.principalInvestigator"> </a><span style="color: grey">32.</span> <b>ResearchStudy.principalInvestigator</b><a href="#ResearchStudy.principalInvestigator" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>A researcher in a study who oversees multiple aspects of the study, such as concept development, protocol writing, protocol submission for IRB approval, participant recruitment, informed consent, data collection, analysis, interpretation and presentation.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a>|<a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ResearchStudy.site"> </a><span style="color: grey">33.</span> <b>ResearchStudy.site</b><a href="#ResearchStudy.site" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>A facility in which study activities are conducted.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/location.html" title="http://hl7.org/fhir/StructureDefinition/Location">Location</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/location.html" title="http://hl7.org/fhir/StructureDefinition/Location">Location</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ResearchStudy.reasonStopped"> </a><span style="color: grey">34.</span> <b>ResearchStudy.reasonStopped</b><a href="#ResearchStudy.reasonStopped" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -734,7 +737,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -748,7 +751,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -792,7 +795,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -806,7 +809,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -884,7 +887,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Detailed Descriptions</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-research-study-examples.html b/StructureDefinition-ncpi-research-study-examples.html index 29d0049d..613a0669 100644 --- a/StructureDefinition-ncpi-research-study-examples.html +++ b/StructureDefinition-ncpi-research-study-examples.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Examples</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -378,7 +378,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Examples</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-research-study-mappings.html b/StructureDefinition-ncpi-research-study-mappings.html index 8d2d7771..e6cc07df 100644 --- a/StructureDefinition-ncpi-research-study-mappings.html +++ b/StructureDefinition-ncpi-research-study-mappings.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Mappings</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -475,7 +475,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Mappings</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-research-study-testing.html b/StructureDefinition-ncpi-research-study-testing.html index 2522f155..45eac8ae 100644 --- a/StructureDefinition-ncpi-research-study-testing.html +++ b/StructureDefinition-ncpi-research-study-testing.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Testing</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -362,7 +362,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Testing</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-research-study.html b/StructureDefinition-ncpi-research-study.html index 410e5f1c..1cec6dd6 100644 --- a/StructureDefinition-ncpi-research-study.html +++ b/StructureDefinition-ncpi-research-study.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -321,7 +321,7 @@ <h2 id="root">Resource Profile: Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -1060,7 +1060,7 @@ <h3 id="practices-for-summary-only-resources">Practices for Summary Only Resourc <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-research-study.json b/StructureDefinition-ncpi-research-study.json index dd3b8804..ff2413c3 100644 --- a/StructureDefinition-ncpi-research-study.json +++ b/StructureDefinition-ncpi-research-study.json @@ -1,2334 +1,1968 @@ -{ - "resourceType": "StructureDefinition", - "id": "ncpi-research-study", - "text": { - "status": "extensions", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-study-definitions.html#ResearchStudy\">ResearchStudy</a><a name=\"ResearchStudy\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/researchstudy.html\">ResearchStudy</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Investigation to increase healthcare-related patient-independent knowledge</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-study-definitions.html#ResearchStudy.category\">category</a><a name=\"ResearchStudy.category\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck101.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-study-definitions.html#ResearchStudy.category.coding\">coding</a><a name=\"ResearchStudy.category.coding\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Code defined by a terminology system</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">StudyCohort</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">Study Cohort</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-study-definitions.html#ResearchStudy.enrollment\">enrollment</a><a name=\"ResearchStudy.enrollment\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Inclusion & exclusion criteria</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - }, - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", - "valueString": "Specialized.Public Health & Research" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", - "valueCode": "business" - } - ], - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study", - "version": "0.2.0", - "name": "NcpiResearchStudy", - "title": "NCPI Research Study", - "status": "draft", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "The NCPI Research Study is based upon the core FHIR ResearchStudy resource and shall act as the umbrella under which all study resources can ultimately be found. For the purposes of interoperability, some restrictions have been made to enforce a common mechanism for describing enrollment and provide a simple means for summarizing subject count and consent group membership.", - "fhirVersion": "4.0.1", - "mapping": [ - { - "identity": "BRIDG5.1", - "uri": "https://bridgmodel.nci.nih.gov", - "name": "BRIDG 5.1 Mapping" - }, - { - "identity": "v2", - "uri": "http://hl7.org/v2", - "name": "HL7 v2 Mapping" - }, - { - "identity": "rim", - "uri": "http://hl7.org/v3", - "name": "RIM Mapping" - }, - { - "identity": "clinicaltrials-gov", - "uri": "http://clinicaltrials.gov", - "name": "ClinicalTrials.gov Mapping" - }, - { - "identity": "w5", - "uri": "http://hl7.org/fhir/fivews", - "name": "FiveWs Pattern Mapping" - } - ], - "kind": "resource", - "abstract": false, - "type": "ResearchStudy", - "baseDefinition": "http://hl7.org/fhir/StructureDefinition/ResearchStudy", - "derivation": "constraint", - "snapshot": { - "element": [ - { - "id": "ResearchStudy", - "path": "ResearchStudy", - "short": "Investigation to increase healthcare-related patient-independent knowledge", - "definition": "A process where a researcher or organization plans and then executes a series of steps intended to increase the field of healthcare-related knowledge. This includes studies of safety, efficacy, comparative effectiveness and other information about medications, devices, therapies and other interventional and investigative techniques. A ResearchStudy involves the gathering of information about human or animal subjects.", - "comment": "Need to make sure we encompass public health studies.", - "alias": [ - "Clinical Trial", - "Study" - ], - "min": 0, - "max": "*", - "base": { - "path": "ResearchStudy", - "min": 0, - "max": "*" - }, - "constraint": [ - { - "key": "dom-2", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL NOT contain nested Resources", - "expression": "contained.contained.empty()", - "xpath": "not(parent::f:contained and f:contained)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-3", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", - "expression": "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", - "xpath": "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-4", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", - "expression": "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-5", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a security label", - "expression": "contained.meta.security.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:security))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", - "valueBoolean": true - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", - "valueMarkdown": "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." - } - ], - "key": "dom-6", - "severity": "warning", - "human": "A resource should have narrative for robust management", - "expression": "text.`div`.exists()", - "xpath": "exists(f:text/h:div)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Entity. Role, or Act" - }, - { - "identity": "BRIDG5.1", - "map": "ObservationalStudyProtocolVersion; Study;\nStudyProtocolVersion" - }, - { - "identity": "v2", - "map": "OBX" - }, - { - "identity": "rim", - "map": "Observation[classCode=CLNTRL, moodCode=EVN]" - } - ] - }, - { - "id": "ResearchStudy.id", - "path": "ResearchStudy.id", - "short": "Logical id of this artifact", - "definition": "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", - "comment": "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "id" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "ResearchStudy.meta", - "path": "ResearchStudy.meta", - "short": "Metadata about the resource", - "definition": "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.meta", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Meta" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "ResearchStudy.implicitRules", - "path": "ResearchStudy.implicitRules", - "short": "A set of rules under which this content was created", - "definition": "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", - "comment": "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.implicitRules", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", - "isSummary": true - }, - { - "id": "ResearchStudy.language", - "path": "ResearchStudy.language", - "short": "Language of the resource content", - "definition": "The base language in which the resource is written.", - "comment": "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", - "min": 0, - "max": "1", - "base": { - "path": "Resource.language", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", - "valueCanonical": "http://hl7.org/fhir/ValueSet/all-languages" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "Language" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "preferred", - "description": "A human language.", - "valueSet": "http://hl7.org/fhir/ValueSet/languages" - } - }, - { - "id": "ResearchStudy.text", - "path": "ResearchStudy.text", - "short": "Text summary of the resource, for human interpretation", - "definition": "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", - "comment": "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", - "alias": [ - "narrative", - "html", - "xhtml", - "display" - ], - "min": 0, - "max": "1", - "base": { - "path": "DomainResource.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Narrative" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Act.text?" - } - ] - }, - { - "id": "ResearchStudy.contained", - "path": "ResearchStudy.contained", - "short": "Contained, inline Resources", - "definition": "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", - "comment": "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", - "alias": [ - "inline resources", - "anonymous resources", - "contained resources" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.contained", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Resource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ResearchStudy.extension", - "path": "ResearchStudy.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ResearchStudy.modifierExtension", - "path": "ResearchStudy.modifierExtension", - "short": "Extensions that cannot be ignored", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ResearchStudy.identifier", - "path": "ResearchStudy.identifier", - "short": "Business Identifier for study", - "definition": "Identifiers assigned to this research study by the sponsor or other systems.", - "requirements": "Allows identification of the research study as it is known by various participating systems and in a way that remains consistent across servers.", - "min": 0, - "max": "*", - "base": { - "path": "ResearchStudy.identifier", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Identifier" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Organization's Unique Protocol ID; Secondary IDs" - }, - { - "identity": "w5", - "map": "FiveWs.identifier" - }, - { - "identity": "BRIDG5.1", - "map": "No BRIDG mapping (although there is DocumentVersion.identifier > StudyProtocolDocumentVersion, this is arguably a different semantic)" - }, - { - "identity": "rim", - "map": ".identifier" - } - ] - }, - { - "id": "ResearchStudy.title", - "path": "ResearchStudy.title", - "short": "Name for this study", - "definition": "A short, descriptive user-friendly label for the study.", - "min": 0, - "max": "1", - "base": { - "path": "ResearchStudy.title", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Brief Title" - }, - { - "identity": "BRIDG5.1", - "map": "No BRIDG mapping (although there is StudyProtocolDocumentVersionPublicTitle this is arguably a different semantic: title of a document vs title of a research study)" - } - ] - }, - { - "id": "ResearchStudy.protocol", - "path": "ResearchStudy.protocol", - "short": "Steps followed in executing study", - "definition": "The set of steps expected to be performed as part of the execution of the study.", - "min": 0, - "max": "*", - "base": { - "path": "ResearchStudy.protocol", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/PlanDefinition" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Interventions; Arm/Intervention Cross-Reference" - }, - { - "identity": "BRIDG5.1", - "map": "StudyProtocolDocumentVersionPublicTitle.name" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=DEFN].target" - } - ] - }, - { - "id": "ResearchStudy.partOf", - "path": "ResearchStudy.partOf", - "short": "Part of larger study", - "definition": "A larger research study of which this particular study is a component or step.", - "requirements": "Allows breaking a study into components (e.g. by study site) each with their own PI, status, enrollment, etc.", - "alias": [ - "container" - ], - "min": 0, - "max": "*", - "base": { - "path": "ResearchStudy.partOf", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/ResearchStudy" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "BRIDG5.1", - "map": "CompanionStudyRelationship" - }, - { - "identity": "rim", - "map": ".inboundRelationship[typeCode=COMP].source[moodCode=EVN]" - } - ] - }, - { - "id": "ResearchStudy.status", - "path": "ResearchStudy.status", - "short": "active | administratively-completed | approved | closed-to-accrual | closed-to-accrual-and-intervention | completed | disapproved | in-review | temporarily-closed-to-accrual | temporarily-closed-to-accrual-and-intervention | withdrawn", - "definition": "The current state of the study.", - "min": 1, - "max": "1", - "base": { - "path": "ResearchStudy.status", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid", - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ResearchStudyStatus" - } - ], - "strength": "required", - "description": "Codes that convey the current status of the research study.", - "valueSet": "http://hl7.org/fhir/ValueSet/research-study-status|4.0.1" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.status" - }, - { - "identity": "BRIDG5.1", - "map": "StudyOverallStatus.code" - }, - { - "identity": "rim", - "map": ".status" - } - ] - }, - { - "id": "ResearchStudy.primaryPurposeType", - "path": "ResearchStudy.primaryPurposeType", - "short": "treatment | prevention | diagnostic | supportive-care | screening | health-services-research | basic-science | device-feasibility", - "definition": "The type of study based upon the intent of the study's activities. A classification of the intent of the study.", - "min": 0, - "max": "1", - "base": { - "path": "ResearchStudy.primaryPurposeType", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ResearchStudyPrimaryPurposeType" - } - ], - "strength": "extensible", - "description": "Codes for the main intent of the study.", - "valueSet": "http://hl7.org/fhir/ValueSet/research-study-prim-purp-type" - }, - "mapping": [ - { - "identity": "BRIDG5.1", - "map": "StudyProtocolVersion.primaryPurposeTypeCode" - } - ] - }, - { - "id": "ResearchStudy.phase", - "path": "ResearchStudy.phase", - "short": "n-a | early-phase-1 | phase-1 | phase-1-phase-2 | phase-2 | phase-2-phase-3 | phase-3 | phase-4", - "definition": "The stage in the progression of a therapy from initial experimental use in humans in clinical trials to post-market evaluation.", - "min": 0, - "max": "1", - "base": { - "path": "ResearchStudy.phase", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ResearchStudyPhase" - } - ], - "strength": "example", - "description": "Codes for the stage in the progression of a therapy from initial experimental use in humans in clinical trials to post-market evaluation.", - "valueSet": "http://hl7.org/fhir/ValueSet/research-study-phase" - }, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Study Phase" - }, - { - "identity": "BRIDG5.1", - "map": "StudyProtocolVersion.phaseCode" - } - ] - }, - { - "id": "ResearchStudy.category", - "path": "ResearchStudy.category", - "short": "Classifications for the study", - "definition": "Codes categorizing the type of study such as investigational vs. observational, type of blinding, type of randomization, safety vs. efficacy, etc.", - "min": 0, - "max": "*", - "base": { - "path": "ResearchStudy.category", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ResearchStudyCategory" - } - ], - "strength": "example", - "description": "Codes that describe the type of research study. E.g. Study phase, Interventional/Observational, blinding type, etc." - }, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Study Type; Primary Purpose; Interventional Model; Masking; Allocation; study Classification; Observational Study Model; Time Perspective; Biospecimen Retention" - }, - { - "identity": "BRIDG5.1", - "map": "InterventionalStudyProtocolVersion; InterventionalStudyProtocol.allocationCode; InterventionalStudyProtocol.blindedRoleCode; InterventionalStudyProtocol.blindingSchemaCode; InterventionalStudyProtocol.controlTypeCode" - } - ] - }, - { - "id": "ResearchStudy.category.id", - "path": "ResearchStudy.category.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ResearchStudy.category.extension", - "path": "ResearchStudy.category.extension", - "slicing": { - "discriminator": [ - { - "type": "value", - "path": "url" - } - ], - "description": "Extensions are always sliced by (at least) url", - "rules": "open" - }, - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ResearchStudy.category.coding", - "path": "ResearchStudy.category.coding", - "short": "Code defined by a terminology system", - "definition": "A reference to a code defined by a terminology system.", - "comment": "Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.", - "requirements": "Allows for alternative encodings within a code system, and translations to other code systems.", - "min": 0, - "max": "*", - "base": { - "path": "CodeableConcept.coding", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Coding" - } - ], - "patternCoding": { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", - "code": "StudyCohort", - "display": "Study Cohort" - }, - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "C*E.1-8, C*E.10-22" - }, - { - "identity": "rim", - "map": "union(., ./translation)" - }, - { - "identity": "orim", - "map": "fhir:CodeableConcept.coding rdfs:subPropertyOf dt:CD.coding" - } - ] - }, - { - "id": "ResearchStudy.category.text", - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable", - "valueBoolean": true - } - ], - "path": "ResearchStudy.category.text", - "short": "Plain text representation of the concept", - "definition": "A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user.", - "comment": "Very often the text is the same as a displayName of one of the codings.", - "requirements": "The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source.", - "min": 0, - "max": "1", - "base": { - "path": "CodeableConcept.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "C*E.9. But note many systems use C*E.2 for this" - }, - { - "identity": "rim", - "map": "./originalText[mediaType/code=\"text/plain\"]/data" - }, - { - "identity": "orim", - "map": "fhir:CodeableConcept.text rdfs:subPropertyOf dt:CD.originalText" - } - ] - }, - { - "id": "ResearchStudy.focus", - "path": "ResearchStudy.focus", - "short": "Drugs, devices, etc. under study", - "definition": "The medication(s), food(s), therapy(ies), device(s) or other concerns or interventions that the study is seeking to gain more information about.", - "min": 0, - "max": "*", - "base": { - "path": "ResearchStudy.focus", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ResearchStudyFocus" - } - ], - "strength": "example", - "description": "Codes for medications, devices and other interventions." - }, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Focus of Study" - }, - { - "identity": "w5", - "map": "FiveWs.what[x]" - }, - { - "identity": "BRIDG5.1", - "map": "InterventionalStudyProtocol.interventionTypeCode" - } - ] - }, - { - "id": "ResearchStudy.condition", - "path": "ResearchStudy.condition", - "short": "Condition being studied", - "definition": "The condition that is the focus of the study. For example, In a study to examine risk factors for Lupus, might have as an inclusion criterion \"healthy volunteer\", but the target condition code would be a Lupus SNOMED code.", - "min": 0, - "max": "*", - "base": { - "path": "ResearchStudy.condition", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ConditionCode" - } - ], - "strength": "example", - "description": "Identification of the condition or diagnosis.", - "valueSet": "http://hl7.org/fhir/ValueSet/condition-code" - }, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Conditions" - }, - { - "identity": "w5", - "map": "FiveWs.what[x]" - }, - { - "identity": "BRIDG5.1", - "map": "StudyCondition.code" - } - ] - }, - { - "id": "ResearchStudy.contact", - "path": "ResearchStudy.contact", - "short": "Contact details for the study", - "definition": "Contact details to assist a user in learning more about or engaging with the study.", - "min": 0, - "max": "*", - "base": { - "path": "ResearchStudy.contact", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "ContactDetail" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Central Contact; Central Contact Backup; Overall Study Officials; Facility Contact & Backup (if Study tied to only one location); Investigators" - }, - { - "identity": "BRIDG5.1", - "map": "PointOfContact > Project > Research Project > Study > StudyProtocol > StudyProtocolVersion" - } - ] - }, - { - "id": "ResearchStudy.relatedArtifact", - "path": "ResearchStudy.relatedArtifact", - "short": "References and dependencies", - "definition": "Citations, references and other related documents.", - "min": 0, - "max": "*", - "base": { - "path": "ResearchStudy.relatedArtifact", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "RelatedArtifact" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Citations, Links, Available Study Data/Documents" - }, - { - "identity": "BRIDG5.1", - "map": "StudyProtocolDocument, StudyProtocolDocumentVersion" - } - ] - }, - { - "id": "ResearchStudy.keyword", - "path": "ResearchStudy.keyword", - "short": "Used to search for the study", - "definition": "Key terms to aid in searching for or filtering the study.", - "min": 0, - "max": "*", - "base": { - "path": "ResearchStudy.keyword", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ResearchStudyKeyword" - } - ], - "strength": "example", - "description": "Words associated with the study that may be useful in discovery." - }, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Keywords" - }, - { - "identity": "BRIDG5.1", - "map": "DocumentVersion.keywordCode; DocumentVersion.keywordText" - } - ] - }, - { - "id": "ResearchStudy.location", - "path": "ResearchStudy.location", - "short": "Geographic region(s) for study", - "definition": "Indicates a country, state or other region where the study is taking place.", - "min": 0, - "max": "*", - "base": { - "path": "ResearchStudy.location", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "Jurisdiction" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "extensible", - "description": "Countries and regions within which this artifact is targeted for use.", - "valueSet": "http://hl7.org/fhir/ValueSet/jurisdiction" - }, - "mapping": [ - { - "identity": "BRIDG5.1", - "map": "StudyProtocolVersion.participatingLocationCode" - } - ] - }, - { - "id": "ResearchStudy.description", - "path": "ResearchStudy.description", - "short": "What this is study doing", - "definition": "A full description of how the study is being conducted.", - "min": 0, - "max": "1", - "base": { - "path": "ResearchStudy.description", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "markdown" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Detailed Description" - }, - { - "identity": "BRIDG5.1", - "map": "StudyProtocolDocumentVersion.publicDescription" - } - ] - }, - { - "id": "ResearchStudy.enrollment", - "path": "ResearchStudy.enrollment", - "short": "Inclusion & exclusion criteria", - "definition": "Reference to a Group that defines the criteria for and quantity of subjects participating in the study. E.g. \" 200 female Europeans between the ages of 20 and 45 with early onset diabetes\".", - "comment": "The Group referenced should not generally enumerate specific subjects. Subjects will be linked to the study using the ResearchSubject resource.", - "alias": [ - "patient" - ], - "min": 1, - "max": "*", - "base": { - "path": "ResearchStudy.enrollment", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Enrollment; Number of Groups/Cohorts (= number of \"enrollment\" instances); Groups (Group/Cohort Label = Group.name; Group/Cohort Description = Group.description); Eligibility (Group criteria)" - }, - { - "identity": "w5", - "map": "FiveWs.subject[x]" - }, - { - "identity": "BRIDG5.1", - "map": "InterventionalStudyProtocol.interventionGroupQuantity" - }, - { - "identity": "rim", - "map": ".participation[typeCode=SBJ].role" - }, - { - "identity": "w5", - "map": "FiveWs.subject" - } - ] - }, - { - "id": "ResearchStudy.period", - "path": "ResearchStudy.period", - "short": "When the study began and ended", - "definition": "Identifies the start date and the expected (or actual, depending on status) end date for the study.", - "alias": [ - "timing" - ], - "min": 0, - "max": "1", - "base": { - "path": "ResearchStudy.period", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Period" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Study Start Date (start); Study Completion Date (end)" - }, - { - "identity": "w5", - "map": "FiveWs.done[x]" - }, - { - "identity": "BRIDG5.1", - "map": "ProjectConduct.dateRange; StudyProtocolVersion.plannedDuration" - }, - { - "identity": "rim", - "map": ".effectiveTime" - } - ] - }, - { - "id": "ResearchStudy.sponsor", - "path": "ResearchStudy.sponsor", - "short": "Organization that initiates and is legally responsible for the study", - "definition": "An organization that initiates the investigation and is legally responsible for the study.", - "min": 0, - "max": "1", - "base": { - "path": "ResearchStudy.sponsor", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Organization" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Sponsor" - }, - { - "identity": "w5", - "map": "FiveWs.actor" - }, - { - "identity": "BRIDG5.1", - "map": "RegulatoryApplicationSponsor; StudyLegalSponsor; StudyProtocolVersion.responsiblePartyCode" - }, - { - "identity": "rim", - "map": ".participation[typeCode=PRF].role[scoper.determinerCode=INSTANCE]" - } - ] - }, - { - "id": "ResearchStudy.principalInvestigator", - "path": "ResearchStudy.principalInvestigator", - "short": "Researcher who oversees multiple aspects of the study", - "definition": "A researcher in a study who oversees multiple aspects of the study, such as concept development, protocol writing, protocol submission for IRB approval, participant recruitment, informed consent, data collection, analysis, interpretation and presentation.", - "min": 0, - "max": "1", - "base": { - "path": "ResearchStudy.principalInvestigator", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Practitioner", - "http://hl7.org/fhir/StructureDefinition/PractitionerRole" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Principal Investigator" - }, - { - "identity": "w5", - "map": "FiveWs.actor" - }, - { - "identity": "BRIDG5.1", - "map": "StudyInvestigator" - } - ] - }, - { - "id": "ResearchStudy.site", - "path": "ResearchStudy.site", - "short": "Facility where study activities are conducted", - "definition": "A facility in which study activities are conducted.", - "min": 0, - "max": "*", - "base": { - "path": "ResearchStudy.site", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Location" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Facility" - }, - { - "identity": "w5", - "map": "FiveWs.where[x]" - }, - { - "identity": "BRIDG5.1", - "map": "PlannedStudySite; StudySite" - } - ] - }, - { - "id": "ResearchStudy.reasonStopped", - "path": "ResearchStudy.reasonStopped", - "short": "accrual-goal-met | closed-due-to-toxicity | closed-due-to-lack-of-study-progress | temporarily-closed-per-study-design", - "definition": "A description and/or code explaining the premature termination of the study.", - "min": 0, - "max": "1", - "base": { - "path": "ResearchStudy.reasonStopped", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ResearchStudyReasonStopped" - } - ], - "strength": "example", - "description": "Codes for why the study ended prematurely.", - "valueSet": "http://hl7.org/fhir/ValueSet/research-study-reason-stopped" - }, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Why Study Stopped" - }, - { - "identity": "w5", - "map": "FiveWs.why[x]" - }, - { - "identity": "BRIDG5.1", - "map": "StudyOverallStatus.studyStoppedReasonCode" - } - ] - }, - { - "id": "ResearchStudy.note", - "path": "ResearchStudy.note", - "short": "Comments made about the study", - "definition": "Comments made about the study by the performer, subject or other participants.", - "min": 0, - "max": "*", - "base": { - "path": "ResearchStudy.note", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Annotation" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "BRIDG5.1", - "map": "No BRIDG mapping" - }, - { - "identity": "rim", - "map": ".inboundRelationship(typeCode=SUBJ].source[classCode=ANNGEN, moodCode=EVN].value[xsi:type=ST]" - } - ] - }, - { - "id": "ResearchStudy.arm", - "path": "ResearchStudy.arm", - "short": "Defined path through the study for a subject", - "definition": "Describes an expected sequence of events for one of the participants of a study. E.g. Exposure to drug A, wash-out, exposure to drug B, wash-out, follow-up.", - "min": 0, - "max": "*", - "base": { - "path": "ResearchStudy.arm", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Arms" - }, - { - "identity": "BRIDG5.1", - "map": "Arm" - } - ] - }, - { - "id": "ResearchStudy.arm.id", - "path": "ResearchStudy.arm.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ResearchStudy.arm.extension", - "path": "ResearchStudy.arm.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ResearchStudy.arm.modifierExtension", - "path": "ResearchStudy.arm.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ResearchStudy.arm.name", - "path": "ResearchStudy.arm.name", - "short": "Label for study arm", - "definition": "Unique, human-readable label for this arm of the study.", - "min": 1, - "max": "1", - "base": { - "path": "ResearchStudy.arm.name", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Arm Label" - }, - { - "identity": "BRIDG5.1", - "map": "Arm.name" - } - ] - }, - { - "id": "ResearchStudy.arm.type", - "path": "ResearchStudy.arm.type", - "short": "Categorization of study arm", - "definition": "Categorization of study arm, e.g. experimental, active comparator, placebo comparater.", - "min": 0, - "max": "1", - "base": { - "path": "ResearchStudy.arm.type", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Arm Type" - }, - { - "identity": "BRIDG5.1", - "map": "Arm.typeCode" - } - ] - }, - { - "id": "ResearchStudy.arm.description", - "path": "ResearchStudy.arm.description", - "short": "Short explanation of study path", - "definition": "A succinct description of the path through the study that would be followed by a subject adhering to this arm.", - "min": 0, - "max": "1", - "base": { - "path": "ResearchStudy.arm.description", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "clinicaltrials-gov", - "map": "Arm Description" - }, - { - "identity": "BRIDG5.1", - "map": "Arm.description" - } - ] - }, - { - "id": "ResearchStudy.objective", - "path": "ResearchStudy.objective", - "short": "A goal for the study", - "definition": "A goal that the study is aiming to achieve in terms of a scientific question to be answered by the analysis of data collected during the study.", - "min": 0, - "max": "*", - "base": { - "path": "ResearchStudy.objective", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "BRIDG5.1", - "map": "StudyObjective" - } - ] - }, - { - "id": "ResearchStudy.objective.id", - "path": "ResearchStudy.objective.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ResearchStudy.objective.extension", - "path": "ResearchStudy.objective.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ResearchStudy.objective.modifierExtension", - "path": "ResearchStudy.objective.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ResearchStudy.objective.name", - "path": "ResearchStudy.objective.name", - "short": "Label for the objective", - "definition": "Unique, human-readable label for this objective of the study.", - "min": 0, - "max": "1", - "base": { - "path": "ResearchStudy.objective.name", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "BRIDG5.1", - "map": "No BRIDG mapping (BRIDG has a description, but not a name)" - } - ] - }, - { - "id": "ResearchStudy.objective.type", - "path": "ResearchStudy.objective.type", - "short": "primary | secondary | exploratory", - "definition": "The kind of study objective.", - "min": 0, - "max": "1", - "base": { - "path": "ResearchStudy.objective.type", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ResearchStudyObjectiveType" - } - ], - "strength": "preferred", - "description": "Codes for the kind of study objective.", - "valueSet": "http://hl7.org/fhir/ValueSet/research-study-objective-type" - }, - "mapping": [ - { - "identity": "BRIDG5.1", - "map": "StudyObjective.typeCode" - } - ] - } - ] - }, - "differential": { - "element": [ - { - "id": "ResearchStudy", - "path": "ResearchStudy" - }, - { - "id": "ResearchStudy.category.coding", - "path": "ResearchStudy.category.coding", - "patternCoding": { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", - "code": "StudyCohort", - "display": "Study Cohort" - } - }, - { - "id": "ResearchStudy.enrollment", - "path": "ResearchStudy.enrollment", - "min": 1, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group" - ] - } - ] - } - ] - } +{ + "resourceType" : "StructureDefinition", + "id" : "ncpi-research-study", + "text" : { + "status" : "extensions", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-study-definitions.html#ResearchStudy\">ResearchStudy</a><a name=\"ResearchStudy\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/researchstudy.html\">ResearchStudy</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Investigation to increase healthcare-related patient-independent knowledge</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-study-definitions.html#ResearchStudy.category\">category</a><a name=\"ResearchStudy.category\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck101.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-study-definitions.html#ResearchStudy.category.coding\">coding</a><a name=\"ResearchStudy.category.coding\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Code defined by a terminology system</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">StudyCohort</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">Study Cohort</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-study-definitions.html#ResearchStudy.enrollment\">enrollment</a><a name=\"ResearchStudy.enrollment\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Inclusion & exclusion criteria</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" + }, + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", + "valueString" : "Specialized.Public Health & Research" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", + "valueCode" : "business" + }], + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study", + "version" : "0.2.0", + "name" : "NcpiResearchStudy", + "title" : "NCPI Research Study", + "status" : "draft", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "The NCPI Research Study is based upon the core FHIR ResearchStudy resource and shall act as the umbrella under which all study resources can ultimately be found. For the purposes of interoperability, some restrictions have been made to enforce a common mechanism for describing enrollment and provide a simple means for summarizing subject count and consent group membership.", + "fhirVersion" : "4.0.1", + "mapping" : [{ + "identity" : "BRIDG5.1", + "uri" : "https://bridgmodel.nci.nih.gov", + "name" : "BRIDG 5.1 Mapping" + }, + { + "identity" : "v2", + "uri" : "http://hl7.org/v2", + "name" : "HL7 v2 Mapping" + }, + { + "identity" : "rim", + "uri" : "http://hl7.org/v3", + "name" : "RIM Mapping" + }, + { + "identity" : "clinicaltrials-gov", + "uri" : "http://clinicaltrials.gov", + "name" : "ClinicalTrials.gov Mapping" + }, + { + "identity" : "w5", + "uri" : "http://hl7.org/fhir/fivews", + "name" : "FiveWs Pattern Mapping" + }], + "kind" : "resource", + "abstract" : false, + "type" : "ResearchStudy", + "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/ResearchStudy", + "derivation" : "constraint", + "snapshot" : { + "element" : [{ + "id" : "ResearchStudy", + "path" : "ResearchStudy", + "short" : "Investigation to increase healthcare-related patient-independent knowledge", + "definition" : "A process where a researcher or organization plans and then executes a series of steps intended to increase the field of healthcare-related knowledge. This includes studies of safety, efficacy, comparative effectiveness and other information about medications, devices, therapies and other interventional and investigative techniques. A ResearchStudy involves the gathering of information about human or animal subjects.", + "comment" : "Need to make sure we encompass public health studies.", + "alias" : ["Clinical Trial", + "Study"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "ResearchStudy", + "min" : 0, + "max" : "*" + }, + "constraint" : [{ + "key" : "dom-2", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL NOT contain nested Resources", + "expression" : "contained.contained.empty()", + "xpath" : "not(parent::f:contained and f:contained)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-3", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", + "expression" : "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", + "xpath" : "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-4", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", + "expression" : "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-5", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a security label", + "expression" : "contained.meta.security.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:security))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", + "valueBoolean" : true + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", + "valueMarkdown" : "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." + }], + "key" : "dom-6", + "severity" : "warning", + "human" : "A resource should have narrative for robust management", + "expression" : "text.`div`.exists()", + "xpath" : "exists(f:text/h:div)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Entity. Role, or Act" + }, + { + "identity" : "BRIDG5.1", + "map" : "ObservationalStudyProtocolVersion; Study;\nStudyProtocolVersion" + }, + { + "identity" : "v2", + "map" : "OBX" + }, + { + "identity" : "rim", + "map" : "Observation[classCode=CLNTRL, moodCode=EVN]" + }] + }, + { + "id" : "ResearchStudy.id", + "path" : "ResearchStudy.id", + "short" : "Logical id of this artifact", + "definition" : "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", + "comment" : "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "id" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "ResearchStudy.meta", + "path" : "ResearchStudy.meta", + "short" : "Metadata about the resource", + "definition" : "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.meta", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Meta" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "ResearchStudy.implicitRules", + "path" : "ResearchStudy.implicitRules", + "short" : "A set of rules under which this content was created", + "definition" : "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", + "comment" : "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.implicitRules", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", + "isSummary" : true + }, + { + "id" : "ResearchStudy.language", + "path" : "ResearchStudy.language", + "short" : "Language of the resource content", + "definition" : "The base language in which the resource is written.", + "comment" : "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.language", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", + "valueCanonical" : "http://hl7.org/fhir/ValueSet/all-languages" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "Language" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "preferred", + "description" : "A human language.", + "valueSet" : "http://hl7.org/fhir/ValueSet/languages" + } + }, + { + "id" : "ResearchStudy.text", + "path" : "ResearchStudy.text", + "short" : "Text summary of the resource, for human interpretation", + "definition" : "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", + "comment" : "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", + "alias" : ["narrative", + "html", + "xhtml", + "display"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "DomainResource.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Narrative" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Act.text?" + }] + }, + { + "id" : "ResearchStudy.contained", + "path" : "ResearchStudy.contained", + "short" : "Contained, inline Resources", + "definition" : "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", + "comment" : "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", + "alias" : ["inline resources", + "anonymous resources", + "contained resources"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.contained", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Resource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ResearchStudy.extension", + "path" : "ResearchStudy.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ResearchStudy.modifierExtension", + "path" : "ResearchStudy.modifierExtension", + "short" : "Extensions that cannot be ignored", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ResearchStudy.identifier", + "path" : "ResearchStudy.identifier", + "short" : "Business Identifier for study", + "definition" : "Identifiers assigned to this research study by the sponsor or other systems.", + "requirements" : "Allows identification of the research study as it is known by various participating systems and in a way that remains consistent across servers.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ResearchStudy.identifier", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Identifier" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Organization's Unique Protocol ID; Secondary IDs" + }, + { + "identity" : "w5", + "map" : "FiveWs.identifier" + }, + { + "identity" : "BRIDG5.1", + "map" : "No BRIDG mapping (although there is DocumentVersion.identifier > StudyProtocolDocumentVersion, this is arguably a different semantic)" + }, + { + "identity" : "rim", + "map" : ".identifier" + }] + }, + { + "id" : "ResearchStudy.title", + "path" : "ResearchStudy.title", + "short" : "Name for this study", + "definition" : "A short, descriptive user-friendly label for the study.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ResearchStudy.title", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Brief Title" + }, + { + "identity" : "BRIDG5.1", + "map" : "No BRIDG mapping (although there is StudyProtocolDocumentVersionPublicTitle this is arguably a different semantic: title of a document vs title of a research study)" + }] + }, + { + "id" : "ResearchStudy.protocol", + "path" : "ResearchStudy.protocol", + "short" : "Steps followed in executing study", + "definition" : "The set of steps expected to be performed as part of the execution of the study.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ResearchStudy.protocol", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/PlanDefinition"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Interventions; Arm/Intervention Cross-Reference" + }, + { + "identity" : "BRIDG5.1", + "map" : "StudyProtocolDocumentVersionPublicTitle.name" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=DEFN].target" + }] + }, + { + "id" : "ResearchStudy.partOf", + "path" : "ResearchStudy.partOf", + "short" : "Part of larger study", + "definition" : "A larger research study of which this particular study is a component or step.", + "requirements" : "Allows breaking a study into components (e.g. by study site) each with their own PI, status, enrollment, etc.", + "alias" : ["container"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "ResearchStudy.partOf", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/ResearchStudy"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "BRIDG5.1", + "map" : "CompanionStudyRelationship" + }, + { + "identity" : "rim", + "map" : ".inboundRelationship[typeCode=COMP].source[moodCode=EVN]" + }] + }, + { + "id" : "ResearchStudy.status", + "path" : "ResearchStudy.status", + "short" : "active | administratively-completed | approved | closed-to-accrual | closed-to-accrual-and-intervention | completed | disapproved | in-review | temporarily-closed-to-accrual | temporarily-closed-to-accrual-and-intervention | withdrawn", + "definition" : "The current state of the study.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "ResearchStudy.status", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid", + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ResearchStudyStatus" + }], + "strength" : "required", + "description" : "Codes that convey the current status of the research study.", + "valueSet" : "http://hl7.org/fhir/ValueSet/research-study-status|4.0.1" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.status" + }, + { + "identity" : "BRIDG5.1", + "map" : "StudyOverallStatus.code" + }, + { + "identity" : "rim", + "map" : ".status" + }] + }, + { + "id" : "ResearchStudy.primaryPurposeType", + "path" : "ResearchStudy.primaryPurposeType", + "short" : "treatment | prevention | diagnostic | supportive-care | screening | health-services-research | basic-science | device-feasibility", + "definition" : "The type of study based upon the intent of the study's activities. A classification of the intent of the study.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ResearchStudy.primaryPurposeType", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ResearchStudyPrimaryPurposeType" + }], + "strength" : "extensible", + "description" : "Codes for the main intent of the study.", + "valueSet" : "http://hl7.org/fhir/ValueSet/research-study-prim-purp-type" + }, + "mapping" : [{ + "identity" : "BRIDG5.1", + "map" : "StudyProtocolVersion.primaryPurposeTypeCode" + }] + }, + { + "id" : "ResearchStudy.phase", + "path" : "ResearchStudy.phase", + "short" : "n-a | early-phase-1 | phase-1 | phase-1-phase-2 | phase-2 | phase-2-phase-3 | phase-3 | phase-4", + "definition" : "The stage in the progression of a therapy from initial experimental use in humans in clinical trials to post-market evaluation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ResearchStudy.phase", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ResearchStudyPhase" + }], + "strength" : "example", + "description" : "Codes for the stage in the progression of a therapy from initial experimental use in humans in clinical trials to post-market evaluation.", + "valueSet" : "http://hl7.org/fhir/ValueSet/research-study-phase" + }, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Study Phase" + }, + { + "identity" : "BRIDG5.1", + "map" : "StudyProtocolVersion.phaseCode" + }] + }, + { + "id" : "ResearchStudy.category", + "path" : "ResearchStudy.category", + "short" : "Classifications for the study", + "definition" : "Codes categorizing the type of study such as investigational vs. observational, type of blinding, type of randomization, safety vs. efficacy, etc.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ResearchStudy.category", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ResearchStudyCategory" + }], + "strength" : "example", + "description" : "Codes that describe the type of research study. E.g. Study phase, Interventional/Observational, blinding type, etc." + }, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Study Type; Primary Purpose; Interventional Model; Masking; Allocation; study Classification; Observational Study Model; Time Perspective; Biospecimen Retention" + }, + { + "identity" : "BRIDG5.1", + "map" : "InterventionalStudyProtocolVersion; InterventionalStudyProtocol.allocationCode; InterventionalStudyProtocol.blindedRoleCode; InterventionalStudyProtocol.blindingSchemaCode; InterventionalStudyProtocol.controlTypeCode" + }] + }, + { + "id" : "ResearchStudy.category.id", + "path" : "ResearchStudy.category.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ResearchStudy.category.extension", + "path" : "ResearchStudy.category.extension", + "slicing" : { + "discriminator" : [{ + "type" : "value", + "path" : "url" + }], + "description" : "Extensions are always sliced by (at least) url", + "rules" : "open" + }, + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ResearchStudy.category.coding", + "path" : "ResearchStudy.category.coding", + "short" : "Code defined by a terminology system", + "definition" : "A reference to a code defined by a terminology system.", + "comment" : "Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.", + "requirements" : "Allows for alternative encodings within a code system, and translations to other code systems.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "CodeableConcept.coding", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Coding" + }], + "patternCoding" : { + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", + "code" : "StudyCohort", + "display" : "Study Cohort" + }, + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "C*E.1-8, C*E.10-22" + }, + { + "identity" : "rim", + "map" : "union(., ./translation)" + }, + { + "identity" : "orim", + "map" : "fhir:CodeableConcept.coding rdfs:subPropertyOf dt:CD.coding" + }] + }, + { + "id" : "ResearchStudy.category.text", + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable", + "valueBoolean" : true + }], + "path" : "ResearchStudy.category.text", + "short" : "Plain text representation of the concept", + "definition" : "A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user.", + "comment" : "Very often the text is the same as a displayName of one of the codings.", + "requirements" : "The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "CodeableConcept.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "C*E.9. But note many systems use C*E.2 for this" + }, + { + "identity" : "rim", + "map" : "./originalText[mediaType/code=\"text/plain\"]/data" + }, + { + "identity" : "orim", + "map" : "fhir:CodeableConcept.text rdfs:subPropertyOf dt:CD.originalText" + }] + }, + { + "id" : "ResearchStudy.focus", + "path" : "ResearchStudy.focus", + "short" : "Drugs, devices, etc. under study", + "definition" : "The medication(s), food(s), therapy(ies), device(s) or other concerns or interventions that the study is seeking to gain more information about.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ResearchStudy.focus", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ResearchStudyFocus" + }], + "strength" : "example", + "description" : "Codes for medications, devices and other interventions." + }, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Focus of Study" + }, + { + "identity" : "w5", + "map" : "FiveWs.what[x]" + }, + { + "identity" : "BRIDG5.1", + "map" : "InterventionalStudyProtocol.interventionTypeCode" + }] + }, + { + "id" : "ResearchStudy.condition", + "path" : "ResearchStudy.condition", + "short" : "Condition being studied", + "definition" : "The condition that is the focus of the study. For example, In a study to examine risk factors for Lupus, might have as an inclusion criterion \"healthy volunteer\", but the target condition code would be a Lupus SNOMED code.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ResearchStudy.condition", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ConditionCode" + }], + "strength" : "example", + "description" : "Identification of the condition or diagnosis.", + "valueSet" : "http://hl7.org/fhir/ValueSet/condition-code" + }, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Conditions" + }, + { + "identity" : "w5", + "map" : "FiveWs.what[x]" + }, + { + "identity" : "BRIDG5.1", + "map" : "StudyCondition.code" + }] + }, + { + "id" : "ResearchStudy.contact", + "path" : "ResearchStudy.contact", + "short" : "Contact details for the study", + "definition" : "Contact details to assist a user in learning more about or engaging with the study.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ResearchStudy.contact", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "ContactDetail" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Central Contact; Central Contact Backup; Overall Study Officials; Facility Contact & Backup (if Study tied to only one location); Investigators" + }, + { + "identity" : "BRIDG5.1", + "map" : "PointOfContact > Project > Research Project > Study > StudyProtocol > StudyProtocolVersion" + }] + }, + { + "id" : "ResearchStudy.relatedArtifact", + "path" : "ResearchStudy.relatedArtifact", + "short" : "References and dependencies", + "definition" : "Citations, references and other related documents.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ResearchStudy.relatedArtifact", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "RelatedArtifact" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Citations, Links, Available Study Data/Documents" + }, + { + "identity" : "BRIDG5.1", + "map" : "StudyProtocolDocument, StudyProtocolDocumentVersion" + }] + }, + { + "id" : "ResearchStudy.keyword", + "path" : "ResearchStudy.keyword", + "short" : "Used to search for the study", + "definition" : "Key terms to aid in searching for or filtering the study.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ResearchStudy.keyword", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ResearchStudyKeyword" + }], + "strength" : "example", + "description" : "Words associated with the study that may be useful in discovery." + }, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Keywords" + }, + { + "identity" : "BRIDG5.1", + "map" : "DocumentVersion.keywordCode; DocumentVersion.keywordText" + }] + }, + { + "id" : "ResearchStudy.location", + "path" : "ResearchStudy.location", + "short" : "Geographic region(s) for study", + "definition" : "Indicates a country, state or other region where the study is taking place.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ResearchStudy.location", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "Jurisdiction" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "extensible", + "description" : "Countries and regions within which this artifact is targeted for use.", + "valueSet" : "http://hl7.org/fhir/ValueSet/jurisdiction" + }, + "mapping" : [{ + "identity" : "BRIDG5.1", + "map" : "StudyProtocolVersion.participatingLocationCode" + }] + }, + { + "id" : "ResearchStudy.description", + "path" : "ResearchStudy.description", + "short" : "What this is study doing", + "definition" : "A full description of how the study is being conducted.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ResearchStudy.description", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "markdown" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Detailed Description" + }, + { + "identity" : "BRIDG5.1", + "map" : "StudyProtocolDocumentVersion.publicDescription" + }] + }, + { + "id" : "ResearchStudy.enrollment", + "path" : "ResearchStudy.enrollment", + "short" : "Inclusion & exclusion criteria", + "definition" : "Reference to a Group that defines the criteria for and quantity of subjects participating in the study. E.g. \" 200 female Europeans between the ages of 20 and 45 with early onset diabetes\".", + "comment" : "The Group referenced should not generally enumerate specific subjects. Subjects will be linked to the study using the ResearchSubject resource.", + "alias" : ["patient"], + "min" : 1, + "max" : "*", + "base" : { + "path" : "ResearchStudy.enrollment", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Enrollment; Number of Groups/Cohorts (= number of \"enrollment\" instances); Groups (Group/Cohort Label = Group.name; Group/Cohort Description = Group.description); Eligibility (Group criteria)" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject[x]" + }, + { + "identity" : "BRIDG5.1", + "map" : "InterventionalStudyProtocol.interventionGroupQuantity" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=SBJ].role" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject" + }] + }, + { + "id" : "ResearchStudy.period", + "path" : "ResearchStudy.period", + "short" : "When the study began and ended", + "definition" : "Identifies the start date and the expected (or actual, depending on status) end date for the study.", + "alias" : ["timing"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "ResearchStudy.period", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Period" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Study Start Date (start); Study Completion Date (end)" + }, + { + "identity" : "w5", + "map" : "FiveWs.done[x]" + }, + { + "identity" : "BRIDG5.1", + "map" : "ProjectConduct.dateRange; StudyProtocolVersion.plannedDuration" + }, + { + "identity" : "rim", + "map" : ".effectiveTime" + }] + }, + { + "id" : "ResearchStudy.sponsor", + "path" : "ResearchStudy.sponsor", + "short" : "Organization that initiates and is legally responsible for the study", + "definition" : "An organization that initiates the investigation and is legally responsible for the study.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ResearchStudy.sponsor", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Organization"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Sponsor" + }, + { + "identity" : "w5", + "map" : "FiveWs.actor" + }, + { + "identity" : "BRIDG5.1", + "map" : "RegulatoryApplicationSponsor; StudyLegalSponsor; StudyProtocolVersion.responsiblePartyCode" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=PRF].role[scoper.determinerCode=INSTANCE]" + }] + }, + { + "id" : "ResearchStudy.principalInvestigator", + "path" : "ResearchStudy.principalInvestigator", + "short" : "Researcher who oversees multiple aspects of the study", + "definition" : "A researcher in a study who oversees multiple aspects of the study, such as concept development, protocol writing, protocol submission for IRB approval, participant recruitment, informed consent, data collection, analysis, interpretation and presentation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ResearchStudy.principalInvestigator", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Practitioner", + "http://hl7.org/fhir/StructureDefinition/PractitionerRole"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Principal Investigator" + }, + { + "identity" : "w5", + "map" : "FiveWs.actor" + }, + { + "identity" : "BRIDG5.1", + "map" : "StudyInvestigator" + }] + }, + { + "id" : "ResearchStudy.site", + "path" : "ResearchStudy.site", + "short" : "Facility where study activities are conducted", + "definition" : "A facility in which study activities are conducted.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ResearchStudy.site", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Location"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Facility" + }, + { + "identity" : "w5", + "map" : "FiveWs.where[x]" + }, + { + "identity" : "BRIDG5.1", + "map" : "PlannedStudySite; StudySite" + }] + }, + { + "id" : "ResearchStudy.reasonStopped", + "path" : "ResearchStudy.reasonStopped", + "short" : "accrual-goal-met | closed-due-to-toxicity | closed-due-to-lack-of-study-progress | temporarily-closed-per-study-design", + "definition" : "A description and/or code explaining the premature termination of the study.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ResearchStudy.reasonStopped", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ResearchStudyReasonStopped" + }], + "strength" : "example", + "description" : "Codes for why the study ended prematurely.", + "valueSet" : "http://hl7.org/fhir/ValueSet/research-study-reason-stopped" + }, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Why Study Stopped" + }, + { + "identity" : "w5", + "map" : "FiveWs.why[x]" + }, + { + "identity" : "BRIDG5.1", + "map" : "StudyOverallStatus.studyStoppedReasonCode" + }] + }, + { + "id" : "ResearchStudy.note", + "path" : "ResearchStudy.note", + "short" : "Comments made about the study", + "definition" : "Comments made about the study by the performer, subject or other participants.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ResearchStudy.note", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Annotation" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "BRIDG5.1", + "map" : "No BRIDG mapping" + }, + { + "identity" : "rim", + "map" : ".inboundRelationship(typeCode=SUBJ].source[classCode=ANNGEN, moodCode=EVN].value[xsi:type=ST]" + }] + }, + { + "id" : "ResearchStudy.arm", + "path" : "ResearchStudy.arm", + "short" : "Defined path through the study for a subject", + "definition" : "Describes an expected sequence of events for one of the participants of a study. E.g. Exposure to drug A, wash-out, exposure to drug B, wash-out, follow-up.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ResearchStudy.arm", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Arms" + }, + { + "identity" : "BRIDG5.1", + "map" : "Arm" + }] + }, + { + "id" : "ResearchStudy.arm.id", + "path" : "ResearchStudy.arm.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ResearchStudy.arm.extension", + "path" : "ResearchStudy.arm.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ResearchStudy.arm.modifierExtension", + "path" : "ResearchStudy.arm.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ResearchStudy.arm.name", + "path" : "ResearchStudy.arm.name", + "short" : "Label for study arm", + "definition" : "Unique, human-readable label for this arm of the study.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "ResearchStudy.arm.name", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Arm Label" + }, + { + "identity" : "BRIDG5.1", + "map" : "Arm.name" + }] + }, + { + "id" : "ResearchStudy.arm.type", + "path" : "ResearchStudy.arm.type", + "short" : "Categorization of study arm", + "definition" : "Categorization of study arm, e.g. experimental, active comparator, placebo comparater.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ResearchStudy.arm.type", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Arm Type" + }, + { + "identity" : "BRIDG5.1", + "map" : "Arm.typeCode" + }] + }, + { + "id" : "ResearchStudy.arm.description", + "path" : "ResearchStudy.arm.description", + "short" : "Short explanation of study path", + "definition" : "A succinct description of the path through the study that would be followed by a subject adhering to this arm.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ResearchStudy.arm.description", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "clinicaltrials-gov", + "map" : "Arm Description" + }, + { + "identity" : "BRIDG5.1", + "map" : "Arm.description" + }] + }, + { + "id" : "ResearchStudy.objective", + "path" : "ResearchStudy.objective", + "short" : "A goal for the study", + "definition" : "A goal that the study is aiming to achieve in terms of a scientific question to be answered by the analysis of data collected during the study.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ResearchStudy.objective", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "BRIDG5.1", + "map" : "StudyObjective" + }] + }, + { + "id" : "ResearchStudy.objective.id", + "path" : "ResearchStudy.objective.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ResearchStudy.objective.extension", + "path" : "ResearchStudy.objective.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ResearchStudy.objective.modifierExtension", + "path" : "ResearchStudy.objective.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ResearchStudy.objective.name", + "path" : "ResearchStudy.objective.name", + "short" : "Label for the objective", + "definition" : "Unique, human-readable label for this objective of the study.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ResearchStudy.objective.name", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "BRIDG5.1", + "map" : "No BRIDG mapping (BRIDG has a description, but not a name)" + }] + }, + { + "id" : "ResearchStudy.objective.type", + "path" : "ResearchStudy.objective.type", + "short" : "primary | secondary | exploratory", + "definition" : "The kind of study objective.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ResearchStudy.objective.type", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ResearchStudyObjectiveType" + }], + "strength" : "preferred", + "description" : "Codes for the kind of study objective.", + "valueSet" : "http://hl7.org/fhir/ValueSet/research-study-objective-type" + }, + "mapping" : [{ + "identity" : "BRIDG5.1", + "map" : "StudyObjective.typeCode" + }] + }] + }, + "differential" : { + "element" : [{ + "id" : "ResearchStudy", + "path" : "ResearchStudy" + }, + { + "id" : "ResearchStudy.category.coding", + "path" : "ResearchStudy.category.coding", + "patternCoding" : { + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", + "code" : "StudyCohort", + "display" : "Study Cohort" + } + }, + { + "id" : "ResearchStudy.enrollment", + "path" : "ResearchStudy.enrollment", + "min" : 1, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group"] + }] + }] + } } \ No newline at end of file diff --git a/StructureDefinition-ncpi-research-study.profile.history.html b/StructureDefinition-ncpi-research-study.profile.history.html index 87b94fde..2b052e0c 100644 --- a/StructureDefinition-ncpi-research-study.profile.history.html +++ b/StructureDefinition-ncpi-research-study.profile.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -298,7 +298,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Change History</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -356,7 +356,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-research-study.profile.json.html b/StructureDefinition-ncpi-research-study.profile.json.html index 5b855e31..71491ce0 100644 --- a/StructureDefinition-ncpi-research-study.profile.json.html +++ b/StructureDefinition-ncpi-research-study.profile.json.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - JSON Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -342,7 +342,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - JSON Profile</h2> "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a>" : "NcpiResearchStudy", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a>" : "NCPI Research Study", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a>" : "draft", - "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>" : [ { @@ -2707,7 +2707,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - JSON Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-research-study.profile.ttl.html b/StructureDefinition-ncpi-research-study.profile.ttl.html index f29aa668..d3831818 100644 --- a/StructureDefinition-ncpi-research-study.profile.ttl.html +++ b/StructureDefinition-ncpi-research-study.profile.ttl.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - TTL Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -329,11 +329,11 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - TTL Profile</h2> a fhir:StructureDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-research-study"]; + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-research-study"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description &amp; Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-study-definitions.html#ResearchStudy\">ResearchStudy</a><a name=\"ResearchStudy\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/researchstudy.html\">ResearchStudy</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Investigation to increase healthcare-related patient-independent knowledge</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-study-definitions.html#ResearchStudy.category\">category</a><a name=\"ResearchStudy.category\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck101.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-study-definitions.html#ResearchStudy.category.coding\">coding</a><a name=\"ResearchStudy.category.coding\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Code defined by a terminology system</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">StudyCohort</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">Study Cohort</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-study-definitions.html#ResearchStudy.enrollment\">enrollment</a><a name=\"ResearchStudy.enrollment\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Inclusion &amp; exclusion criteria</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -342,14 +342,14 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "business" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NcpiResearchStudy"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI Research Study"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NcpiResearchStudy"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI Research Study"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">fhir:StructureDefinition.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -365,9 +365,9 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "The NCPI Research Study is based upon the core FHIR ResearchStudy resource and shall act as the umbrella under which all study resources can ultimately be found. For the purposes of interoperability, some restrictions have been made to enforce a common mechanism for describing enrollment and provide a simple means for summarizing subject count and consent group membership."]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "The NCPI Research Study is based upon the core FHIR ResearchStudy resource and shall act as the umbrella under which all study resources can ultimately be found. For the purposes of interoperability, some restrictions have been made to enforce a common mechanism for describing enrollment and provide a simple means for summarizing subject count and consent group membership."]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping">fhir:StructureDefinition.mapping</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "BRIDG5.1" ]; @@ -393,15 +393,15 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "w5" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.uri">fhir:StructureDefinition.mapping.uri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/fivews" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.name">fhir:StructureDefinition.mapping.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "FiveWs Pattern Mapping" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "ResearchStudy"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "ResearchStudy"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.baseDefinition">fhir:StructureDefinition.baseDefinition</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/ResearchStudy"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/ResearchStudy> - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot">fhir:StructureDefinition.snapshot</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot.element">fhir:StructureDefinition.snapshot.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2298,7 +2298,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.identity">fhir:ElementDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "BRIDG5.1" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.map">fhir:ElementDefinition.mapping.map</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "StudyObjective.typeCode" ] ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential">fhir:StructureDefinition.differential</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential.element">fhir:StructureDefinition.differential.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2322,7 +2322,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group> ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -2384,7 +2384,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - TTL Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-research-study.profile.xml.html b/StructureDefinition-ncpi-research-study.profile.xml.html index 2586e5d6..c3d19753 100644 --- a/StructureDefinition-ncpi-research-study.profile.xml.html +++ b/StructureDefinition-ncpi-research-study.profile.xml.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - XML Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -348,7 +348,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - XML Profile</h2> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NcpiResearchStudy"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI Research Study"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> - <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -2487,7 +2487,7 @@ <h2 id="root">Resource Profile: NcpiResearchStudy - XML Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-research-study.ttl b/StructureDefinition-ncpi-research-study.ttl index 9ce0d0e2..912f4500 100644 --- a/StructureDefinition-ncpi-research-study.ttl +++ b/StructureDefinition-ncpi-research-study.ttl @@ -7,11 +7,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study> a fhir:StructureDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "ncpi-research-study"]; + fhir:Resource.id [ fhir:value "ncpi-research-study"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-study-definitions.html#ResearchStudy\">ResearchStudy</a><a name=\"ResearchStudy\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/researchstudy.html\">ResearchStudy</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Investigation to increase healthcare-related patient-independent knowledge</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-study-definitions.html#ResearchStudy.category\">category</a><a name=\"ResearchStudy.category\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck101.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-study-definitions.html#ResearchStudy.category.coding\">coding</a><a name=\"ResearchStudy.category.coding\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Code defined by a terminology system</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">StudyCohort</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">Study Cohort</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-research-study-definitions.html#ResearchStudy.enrollment\">enrollment</a><a name=\"ResearchStudy.enrollment\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Inclusion & exclusion criteria</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -20,14 +20,14 @@ fhir:index 1; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; fhir:Extension.valueCode [ fhir:value "business" ] - ]; - fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study"]; - fhir:StructureDefinition.version [ fhir:value "0.2.0"]; - fhir:StructureDefinition.name [ fhir:value "NcpiResearchStudy"]; - fhir:StructureDefinition.title [ fhir:value "NCPI Research Study"]; - fhir:StructureDefinition.status [ fhir:value "draft"]; - fhir:StructureDefinition.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study"]; # + fhir:StructureDefinition.version [ fhir:value "0.2.0"]; # + fhir:StructureDefinition.name [ fhir:value "NcpiResearchStudy"]; # + fhir:StructureDefinition.title [ fhir:value "NCPI Research Study"]; # + fhir:StructureDefinition.status [ fhir:value "draft"]; # + fhir:StructureDefinition.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:StructureDefinition.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -45,9 +45,9 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:StructureDefinition.description [ fhir:value "The NCPI Research Study is based upon the core FHIR ResearchStudy resource and shall act as the umbrella under which all study resources can ultimately be found. For the purposes of interoperability, some restrictions have been made to enforce a common mechanism for describing enrollment and provide a simple means for summarizing subject count and consent group membership."]; - fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; + ]; # + fhir:StructureDefinition.description [ fhir:value "The NCPI Research Study is based upon the core FHIR ResearchStudy resource and shall act as the umbrella under which all study resources can ultimately be found. For the purposes of interoperability, some restrictions have been made to enforce a common mechanism for describing enrollment and provide a simple means for summarizing subject count and consent group membership."]; # + fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; # fhir:StructureDefinition.mapping [ fhir:index 0; fhir:StructureDefinition.mapping.identity [ fhir:value "BRIDG5.1" ]; @@ -73,15 +73,15 @@ fhir:StructureDefinition.mapping.identity [ fhir:value "w5" ]; fhir:StructureDefinition.mapping.uri [ fhir:value "http://hl7.org/fhir/fivews" ]; fhir:StructureDefinition.mapping.name [ fhir:value "FiveWs Pattern Mapping" ] - ]; - fhir:StructureDefinition.kind [ fhir:value "resource"]; - fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; - fhir:StructureDefinition.type [ fhir:value "ResearchStudy"]; + ]; # + fhir:StructureDefinition.kind [ fhir:value "resource"]; # + fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; # + fhir:StructureDefinition.type [ fhir:value "ResearchStudy"]; # fhir:StructureDefinition.baseDefinition [ fhir:value "http://hl7.org/fhir/StructureDefinition/ResearchStudy"; fhir:link <http://hl7.org/fhir/StructureDefinition/ResearchStudy> - ]; - fhir:StructureDefinition.derivation [ fhir:value "constraint"]; + ]; # + fhir:StructureDefinition.derivation [ fhir:value "constraint"]; # fhir:StructureDefinition.snapshot [ fhir:StructureDefinition.snapshot.element [ fhir:index 0; @@ -2402,7 +2402,7 @@ fhir:ElementDefinition.mapping.map [ fhir:value "StudyObjective.typeCode" ] ] ] - ]; + ]; # fhir:StructureDefinition.differential [ fhir:StructureDefinition.differential.element [ fhir:index 0; @@ -2432,7 +2432,7 @@ ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/StructureDefinition-ncpi-research-study.xlsx b/StructureDefinition-ncpi-research-study.xlsx index 4ea3b6a0..32d9ad82 100644 Binary files a/StructureDefinition-ncpi-research-study.xlsx and b/StructureDefinition-ncpi-research-study.xlsx differ diff --git a/StructureDefinition-ncpi-research-study.xml b/StructureDefinition-ncpi-research-study.xml index 0f26ae32..a7cfa9a0 100644 --- a/StructureDefinition-ncpi-research-study.xml +++ b/StructureDefinition-ncpi-research-study.xml @@ -23,7 +23,7 @@ <name value="NcpiResearchStudy"/> <title value="NCPI Research Study"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/StructureDefinition-ncpi-specimen-task-definitions.html b/StructureDefinition-ncpi-specimen-task-definitions.html index 1749e6f8..edbfc853 100644 --- a/StructureDefinition-ncpi-specimen-task-definitions.html +++ b/StructureDefinition-ncpi-specimen-task-definitions.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -327,23 +327,25 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> </ul> <a name="tabs-diff"> </a> <div id="tabs-diff"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Task"> </a><span style="color: grey">1.</span> <b>Task</b><a href="#diff_Task" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Task.focus"> </a><span style="color: grey">2.</span> <b>Task.focus</b><a href="#diff_Task.focus" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>1</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="http://hl7.org/fhir/R4/specimen.html" title="http://hl7.org/fhir/StructureDefinition/Specimen">Specimen</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="http://hl7.org/fhir/R4/specimen.html" title="http://hl7.org/fhir/StructureDefinition/Specimen">Specimen</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>)</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Task.for"> </a><span style="color: grey">3.</span> <b>Task.for</b><a href="#diff_Task.for" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>1</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>)</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Task.owner"> </a><span style="color: grey">4.</span> <b>Task.owner</b><a href="#diff_Task.owner" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>1</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/careteam.html" title="http://hl7.org/fhir/StructureDefinition/CareTeam">CareTeam</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/healthcareservice.html" title="http://hl7.org/fhir/StructureDefinition/HealthcareService">HealthcareService</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/careteam.html" title="http://hl7.org/fhir/StructureDefinition/CareTeam">CareTeam</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/healthcareservice.html" title="http://hl7.org/fhir/StructureDefinition/HealthcareService">HealthcareService</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a></span>)</td></tr> </table> </div> <a name="tabs-key"> </a> <div id="tabs-key"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="key_Task"> </a><span style="color: grey">1.</span> <b>Task</b><a href="#key_Task" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><span style='color:DarkGray'><p>A task to be performed.</p> </span></td></tr> @@ -402,7 +404,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td>Definition</td><td><span style='color:DarkGray'><p>The request being actioned or the resource being manipulated by this task.</p> </span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>1</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="http://hl7.org/fhir/R4/specimen.html" title="http://hl7.org/fhir/StructureDefinition/Specimen">Specimen</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="http://hl7.org/fhir/R4/specimen.html" title="http://hl7.org/fhir/StructureDefinition/Specimen">Specimen</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>)</td></tr> <tr><td>Requirements</td><td><span style='color:DarkGray'><p>Used to identify the thing to be done.</p> </span></td></tr> <tr><td>Comments</td><td><span style='color:DarkGray'><p>If multiple resources need to be manipulated, use sub-tasks. (This ensures that status can be tracked independently for each referenced resource.).</p> @@ -413,7 +415,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td>Definition</td><td><span style='color:DarkGray'><p>The entity who benefits from the performance of the service specified in the task (e.g., the patient).</p> </span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>1</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>)</td></tr> <tr><td>Requirements</td><td><span style='color:DarkGray'><p>Used to track tasks outstanding for a beneficiary. Do not use to track the task owner or creator (see owner and creator respectively). This can also affect access control.</p> </span></td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td><span style='color:DarkGray'>Patient</span></td></tr> @@ -423,7 +425,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td>Definition</td><td><span style='color:DarkGray'><p>Individual organization or Device currently responsible for task execution.</p> </span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>1</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/careteam.html" title="http://hl7.org/fhir/StructureDefinition/CareTeam">CareTeam</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/healthcareservice.html" title="http://hl7.org/fhir/StructureDefinition/HealthcareService">HealthcareService</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/careteam.html" title="http://hl7.org/fhir/StructureDefinition/CareTeam">CareTeam</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/healthcareservice.html" title="http://hl7.org/fhir/StructureDefinition/HealthcareService">HealthcareService</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a></span>)</td></tr> <tr><td>Requirements</td><td><span style='color:DarkGray'><p>Identifies who is expected to perform this task.</p> </span></td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td><span style='color:DarkGray'>Performer</span>, <span style='color:DarkGray'>Executer</span></td></tr> @@ -436,7 +438,8 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> </div> <a name="tabs-snap"> </a> <div id="tabs-snap"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Task"> </a><span style="color: grey">1.</span> <b>Task</b><a href="#Task" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>A task to be performed.</p> </td></tr> @@ -482,7 +485,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#Narrative">Narrative</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrativehtmlxhtmldisplay</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrative, html, xhtml, display</td></tr> <tr><td>Comments</td><td><p>Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a "text blob" or where text is additionally entered raw or narrated and encoded information is added later.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -492,7 +495,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/resource.html">Resource</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resourcesanonymous resourcescontained resources</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resources, anonymous resources, contained resources</td></tr> <tr><td>Comments</td><td><p>This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Task.extension"> </a><span style="color: grey">8.</span> <b>Task.extension</b><a href="#Task.extension" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -500,7 +503,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -514,7 +517,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -531,7 +534,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The URL pointing to a <em>FHIR</em>-defined protocol, guideline, orderset or other definition that is adhered to in whole or in part by this Task.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a>(<a href="http://hl7.org/fhir/R4/activitydefinition.html" title="http://hl7.org/fhir/StructureDefinition/ActivityDefinition">ActivityDefinition</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a>(<a href="http://hl7.org/fhir/R4/activitydefinition.html" title="http://hl7.org/fhir/StructureDefinition/ActivityDefinition">ActivityDefinition</a>)</td></tr> <tr><td>Requirements</td><td><p>Enables a formal definition of how he task is to be performed, enabling automation.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -549,7 +552,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>BasedOn refers to a higher-level authorization that triggered the creation of the task. It references a "request" resource such as a ServiceRequest, MedicationRequest, ServiceRequest, CarePlan, etc. which is distinct from the "request" resource the task is seeking to fulfill. This latter resource is referenced by FocusOn. For example, based on a ServiceRequest (= BasedOn), a task is created to fulfill a procedureRequest ( = FocusOn ) to collect a specimen from a patient.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Task.groupIdentifier"> </a><span style="color: grey">14.</span> <b>Task.groupIdentifier</b><a href="#Task.groupIdentifier" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -565,7 +568,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Task that this particular task is part of.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/task.html" title="http://hl7.org/fhir/StructureDefinition/Task">Task</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/task.html" title="http://hl7.org/fhir/StructureDefinition/Task">Task</a>)</td></tr> <tr><td>Requirements</td><td><p>Allows tasks to be broken down into sub-steps (and this division can occur independent of the original task).</p> </td></tr> <tr><td>Comments</td><td><p>This should usually be 0..1.</p> @@ -656,7 +659,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The request being actioned or the resource being manipulated by this task.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/specimen.html" title="http://hl7.org/fhir/StructureDefinition/Specimen">Specimen</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/specimen.html" title="http://hl7.org/fhir/StructureDefinition/Specimen">Specimen</a>)</td></tr> <tr><td>Requirements</td><td><p>Used to identify the thing to be done.</p> </td></tr> <tr><td>Comments</td><td><p>If multiple resources need to be manipulated, use sub-tasks. (This ensures that status can be tracked independently for each referenced resource.).</p> @@ -667,7 +670,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The entity who benefits from the performance of the service specified in the task (e.g., the patient).</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>)</td></tr> <tr><td>Requirements</td><td><p>Used to track tasks outstanding for a beneficiary. Do not use to track the task owner or creator (see owner and creator respectively). This can also affect access control.</p> </td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Patient</td></tr> @@ -677,7 +680,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The healthcare event (e.g. a patient and healthcare provider interaction) during which this task was created.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html" title="http://hl7.org/fhir/StructureDefinition/Encounter">Encounter</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html" title="http://hl7.org/fhir/StructureDefinition/Encounter">Encounter</a>)</td></tr> <tr><td>Requirements</td><td><p>For some tasks it may be important to know the link between the encounter the task originated within.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -713,7 +716,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The creator of the task.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a><a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a><a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a><a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a>|<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>|<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a>|<a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a>|<a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>)</td></tr> <tr><td>Requirements</td><td><p>Identifies who created this task. May be used by access control mechanisms (e.g., to ensure that only the creator can cancel a task).</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -734,10 +737,10 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Individual organization or Device currently responsible for task execution.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>)</td></tr> <tr><td>Requirements</td><td><p>Identifies who is expected to perform this task.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>PerformerExecuter</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Performer, Executer</td></tr> <tr><td>Comments</td><td><p>Tasks may be created with an owner not yet identified.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -746,7 +749,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Principal physical location where the this task is performed.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/location.html" title="http://hl7.org/fhir/StructureDefinition/Location">Location</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/location.html" title="http://hl7.org/fhir/StructureDefinition/Location">Location</a>)</td></tr> <tr><td>Requirements</td><td><p>Ties the event to where the records are likely kept and provides context around the event occurrence (e.g. if it occurred inside or outside a dedicated healthcare setting).</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -766,7 +769,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>A resource reference indicating why this task needs to be performed.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>)</td></tr> <tr><td>Comments</td><td><p>Tasks might be justified based on an Observation, a Condition, a past or planned procedure, etc. This should only be included if there is no focus or if it differs from the reason indicated on the focus. Use the CodeableConcept text element in <code>Task.reasonCode</code> if the data is free (uncoded) text.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -775,7 +778,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Insurance plans, coverage extensions, pre-authorizations and/or pre-determinations that may be relevant to the Task.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/coverage.html" title="http://hl7.org/fhir/StructureDefinition/Coverage">Coverage</a><a href="http://hl7.org/fhir/R4/claimresponse.html" title="http://hl7.org/fhir/StructureDefinition/ClaimResponse">ClaimResponse</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/coverage.html" title="http://hl7.org/fhir/StructureDefinition/Coverage">Coverage</a>|<a href="http://hl7.org/fhir/R4/claimresponse.html" title="http://hl7.org/fhir/StructureDefinition/ClaimResponse">ClaimResponse</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Task.note"> </a><span style="color: grey">36.</span> <b>Task.note</b><a href="#Task.note" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -789,7 +792,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Links to Provenance records for past versions of this Task that identify key state transitions or updates that are likely to be relevant to a user looking at the current version of the task.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/provenance.html" title="http://hl7.org/fhir/StructureDefinition/Provenance">Provenance</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/provenance.html" title="http://hl7.org/fhir/StructureDefinition/Provenance">Provenance</a>)</td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Status History</td></tr> <tr><td>Comments</td><td><p>This element does not point to the Provenance associated with the <em>current</em> version of the resource - as it would be created after this version existed. The Provenance for the current version can be retrieved with a _revinclude.</p> </td></tr> @@ -815,7 +818,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -829,7 +832,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -858,7 +861,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>For requests that are targeted to more than on potential recipient/target, for whom is fulfillment sought?</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a><a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a><a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a><a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a>|<a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a>|<a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>|<a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a>|<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Task.input"> </a><span style="color: grey">45.</span> <b>Task.input</b><a href="#Task.input" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -882,7 +885,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -896,7 +899,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -943,7 +946,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -957,7 +960,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -1040,7 +1043,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Detailed Descriptions</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-specimen-task-examples.html b/StructureDefinition-ncpi-specimen-task-examples.html index c68e243a..7de8a3f6 100644 --- a/StructureDefinition-ncpi-specimen-task-examples.html +++ b/StructureDefinition-ncpi-specimen-task-examples.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Examples</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -378,7 +378,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Examples</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-specimen-task-mappings.html b/StructureDefinition-ncpi-specimen-task-mappings.html index fa0e638a..95b89296 100644 --- a/StructureDefinition-ncpi-specimen-task-mappings.html +++ b/StructureDefinition-ncpi-specimen-task-mappings.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Mappings</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -474,7 +474,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Mappings</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-specimen-task-testing.html b/StructureDefinition-ncpi-specimen-task-testing.html index 4f8b7850..89f6c7ec 100644 --- a/StructureDefinition-ncpi-specimen-task-testing.html +++ b/StructureDefinition-ncpi-specimen-task-testing.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Testing</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -362,7 +362,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Testing</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-specimen-task.html b/StructureDefinition-ncpi-specimen-task.html index 32029496..9f7d8766 100644 --- a/StructureDefinition-ncpi-specimen-task.html +++ b/StructureDefinition-ncpi-specimen-task.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -321,7 +321,7 @@ <h2 id="root">Resource Profile: Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -1434,7 +1434,7 @@ <h4>Constraints</h4> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-specimen-task.json b/StructureDefinition-ncpi-specimen-task.json index d90d7a84..9c6e4403 100644 --- a/StructureDefinition-ncpi-specimen-task.json +++ b/StructureDefinition-ncpi-specimen-task.json @@ -1,2996 +1,2548 @@ -{ - "resourceType": "StructureDefinition", - "id": "ncpi-specimen-task", - "text": { - "status": "extensions", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-specimen-task-definitions.html#Task\">Task</a><a name=\"Task\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/task.html\">Task</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">A task to be performed</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-specimen-task-definitions.html#Task.focus\">focus</a><a name=\"Task.focus\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/specimen.html\">Specimen</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">What task is acting on</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-specimen-task-definitions.html#Task.for\">for</a><a name=\"Task.for\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/patient.html\">Patient</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Beneficiary of the Task</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-specimen-task-definitions.html#Task.owner\">owner</a><a name=\"Task.owner\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/organization.html\">Organization</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Responsible individual</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - }, - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", - "valueString": "Base.Workflow" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", - "valueCode": "not-classified" - } - ], - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-specimen-task", - "version": "0.2.0", - "name": "SpecimenTask", - "title": "Research Task", - "status": "draft", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "A FHIR analysis task that takes at least one specimen as input and produces at least one document.", - "fhirVersion": "4.0.1", - "mapping": [ - { - "identity": "workflow", - "uri": "http://hl7.org/fhir/workflow", - "name": "Workflow Pattern" - }, - { - "identity": "rim", - "uri": "http://hl7.org/v3", - "name": "RIM Mapping" - }, - { - "identity": "w5", - "uri": "http://hl7.org/fhir/fivews", - "name": "FiveWs Pattern Mapping" - }, - { - "identity": "v2", - "uri": "http://hl7.org/v2", - "name": "HL7 v2 Mapping" - } - ], - "kind": "resource", - "abstract": false, - "type": "Task", - "baseDefinition": "http://hl7.org/fhir/StructureDefinition/Task", - "derivation": "constraint", - "snapshot": { - "element": [ - { - "id": "Task", - "path": "Task", - "short": "A task to be performed", - "definition": "A task to be performed.", - "min": 0, - "max": "*", - "base": { - "path": "Task", - "min": 0, - "max": "*" - }, - "constraint": [ - { - "key": "dom-2", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL NOT contain nested Resources", - "expression": "contained.contained.empty()", - "xpath": "not(parent::f:contained and f:contained)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-3", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", - "expression": "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", - "xpath": "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-4", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", - "expression": "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-5", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a security label", - "expression": "contained.meta.security.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:security))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", - "valueBoolean": true - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", - "valueMarkdown": "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." - } - ], - "key": "dom-6", - "severity": "warning", - "human": "A resource should have narrative for robust management", - "expression": "text.`div`.exists()", - "xpath": "exists(f:text/h:div)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "inv-1", - "severity": "error", - "human": "Last modified date must be greater than or equal to authored-on date.", - "expression": "lastModified.exists().not() or authoredOn.exists().not() or lastModified >= authoredOn", - "xpath": "not(exists(f:lastModified/@value)) or not(exists(f:authoredOn/@value)) or f:lastModified/@value >= f:authoredOn/@value", - "source": "http://hl7.org/fhir/StructureDefinition/Task" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Entity. Role, or Act" - }, - { - "identity": "workflow", - "map": "Request, Event" - }, - { - "identity": "rim", - "map": "ControlAct[moodCode=INT]" - } - ] - }, - { - "id": "Task.id", - "path": "Task.id", - "short": "Logical id of this artifact", - "definition": "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", - "comment": "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "id" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "Task.meta", - "path": "Task.meta", - "short": "Metadata about the resource", - "definition": "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.meta", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Meta" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "Task.implicitRules", - "path": "Task.implicitRules", - "short": "A set of rules under which this content was created", - "definition": "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", - "comment": "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.implicitRules", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", - "isSummary": true - }, - { - "id": "Task.language", - "path": "Task.language", - "short": "Language of the resource content", - "definition": "The base language in which the resource is written.", - "comment": "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", - "min": 0, - "max": "1", - "base": { - "path": "Resource.language", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", - "valueCanonical": "http://hl7.org/fhir/ValueSet/all-languages" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "Language" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "preferred", - "description": "A human language.", - "valueSet": "http://hl7.org/fhir/ValueSet/languages" - } - }, - { - "id": "Task.text", - "path": "Task.text", - "short": "Text summary of the resource, for human interpretation", - "definition": "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", - "comment": "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", - "alias": [ - "narrative", - "html", - "xhtml", - "display" - ], - "min": 0, - "max": "1", - "base": { - "path": "DomainResource.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Narrative" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Act.text?" - } - ] - }, - { - "id": "Task.contained", - "path": "Task.contained", - "short": "Contained, inline Resources", - "definition": "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", - "comment": "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", - "alias": [ - "inline resources", - "anonymous resources", - "contained resources" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.contained", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Resource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Task.extension", - "path": "Task.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Task.modifierExtension", - "path": "Task.modifierExtension", - "short": "Extensions that cannot be ignored", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Task.identifier", - "path": "Task.identifier", - "short": "Task Instance Identifier", - "definition": "The business identifier for this task.", - "min": 0, - "max": "*", - "base": { - "path": "Task.identifier", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Identifier" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Request.identifier, Event.identifier" - }, - { - "identity": "w5", - "map": "FiveWs.identifier" - }, - { - "identity": "rim", - "map": ".id" - } - ] - }, - { - "id": "Task.instantiatesCanonical", - "path": "Task.instantiatesCanonical", - "short": "Formal definition of task", - "definition": "The URL pointing to a *FHIR*-defined protocol, guideline, orderset or other definition that is adhered to in whole or in part by this Task.", - "requirements": "Enables a formal definition of how he task is to be performed, enabling automation.", - "min": 0, - "max": "1", - "base": { - "path": "Task.instantiatesCanonical", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "canonical", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/ActivityDefinition" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Request.instantiatesCanonical, Event.instantiatesCanonical" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=DEFN].target" - } - ] - }, - { - "id": "Task.instantiatesUri", - "path": "Task.instantiatesUri", - "short": "Formal definition of task", - "definition": "The URL pointing to an *externally* maintained protocol, guideline, orderset or other definition that is adhered to in whole or in part by this Task.", - "requirements": "Enables a formal definition of how he task is to be performed (e.g. using BPMN, BPEL, XPDL or other formal notation to be associated with a task), enabling automation.", - "min": 0, - "max": "1", - "base": { - "path": "Task.instantiatesUri", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.instantiatesUrl" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=DEFN].target" - } - ] - }, - { - "id": "Task.basedOn", - "path": "Task.basedOn", - "short": "Request fulfilled by this task", - "definition": "BasedOn refers to a higher-level authorization that triggered the creation of the task. It references a \"request\" resource such as a ServiceRequest, MedicationRequest, ServiceRequest, CarePlan, etc. which is distinct from the \"request\" resource the task is seeking to fulfill. This latter resource is referenced by FocusOn. For example, based on a ServiceRequest (= BasedOn), a task is created to fulfill a procedureRequest ( = FocusOn ) to collect a specimen from a patient.", - "min": 0, - "max": "*", - "base": { - "path": "Task.basedOn", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Resource" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Request.basedOn, Event.basedOn" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=FLFS].target[moodCode=INT]" - } - ] - }, - { - "id": "Task.groupIdentifier", - "path": "Task.groupIdentifier", - "short": "Requisition or grouper id", - "definition": "An identifier that links together multiple tasks and other requests that were created in the same context.", - "requirements": "Billing and/or reporting can be linked to whether multiple requests were created as a single unit.", - "min": 0, - "max": "1", - "base": { - "path": "Task.groupIdentifier", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Identifier" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Request.groupIdentifier" - }, - { - "identity": "rim", - "map": ".inboundRelationship[typeCode=COMP].source[moodCode=INT].id" - } - ] - }, - { - "id": "Task.partOf", - "path": "Task.partOf", - "short": "Composite task", - "definition": "Task that this particular task is part of.", - "comment": "This should usually be 0..1.", - "requirements": "Allows tasks to be broken down into sub-steps (and this division can occur independent of the original task).", - "min": 0, - "max": "*", - "base": { - "path": "Task.partOf", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Task" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.partOf" - }, - { - "identity": "rim", - "map": ".inboundRelationship[typeCode=COMP].source[moodCode=INT]" - } - ] - }, - { - "id": "Task.status", - "path": "Task.status", - "short": "draft | requested | received | accepted | +", - "definition": "The current status of the task.", - "requirements": "These states enable coordination of task status with off-the-shelf workflow solutions that support automation of tasks.", - "min": 1, - "max": "1", - "base": { - "path": "Task.status", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid", - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "TaskStatus" - } - ], - "strength": "required", - "description": "The current status of the task.", - "valueSet": "http://hl7.org/fhir/ValueSet/task-status|4.0.1" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Request.status, Event.status" - }, - { - "identity": "w5", - "map": "FiveWs.status" - }, - { - "identity": "rim", - "map": ".statusCode" - } - ] - }, - { - "id": "Task.statusReason", - "path": "Task.statusReason", - "short": "Reason for current status", - "definition": "An explanation as to why this task is held, failed, was refused, etc.", - "comment": "This applies to the current status. Look at the history of the task to see reasons for past statuses.", - "min": 0, - "max": "1", - "base": { - "path": "Task.statusReason", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "TaskStatusReason" - } - ], - "strength": "example", - "description": "Codes to identify the reason for current status. These will typically be specific to a particular workflow." - }, - "mapping": [ - { - "identity": "rim", - "map": ".inboundRelationship[typeCode=SUBJ].source[classCode=CACT, moodCode=EVN, code=\"status change\"].reasonCode" - } - ] - }, - { - "id": "Task.businessStatus", - "path": "Task.businessStatus", - "short": "E.g. \"Specimen collected\", \"IV prepped\"", - "definition": "Contains business-specific nuances of the business state.", - "requirements": "There's often a need to track substates of a task - this is often variable by specific workflow implementation.", - "min": 0, - "max": "1", - "base": { - "path": "Task.businessStatus", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "TaskBusinessStatus" - } - ], - "strength": "example", - "description": "The domain-specific business-contextual sub-state of the task. For example: \"Blood drawn\", \"IV inserted\", \"Awaiting physician signature\", etc." - }, - "mapping": [ - { - "identity": "rim", - "map": ".inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"business status\"]" - } - ] - }, - { - "id": "Task.intent", - "path": "Task.intent", - "short": "unknown | proposal | plan | order | original-order | reflex-order | filler-order | instance-order | option", - "definition": "Indicates the \"level\" of actionability associated with the Task, i.e. i+R[9]Cs this a proposed task, a planned task, an actionable task, etc.", - "comment": "This element is immutable. Proposed tasks, planned tasks, etc. must be distinct instances.\n\nIn most cases, Tasks will have an intent of \"order\".", - "min": 1, - "max": "1", - "base": { - "path": "Task.intent", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "TaskIntent" - } - ], - "strength": "required", - "description": "Distinguishes whether the task is a proposal, plan or full order.", - "valueSet": "http://hl7.org/fhir/ValueSet/task-intent|4.0.1" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Request.intent" - }, - { - "identity": "w5", - "map": "FiveWs.class" - }, - { - "identity": "rim", - "map": ".moodCode" - } - ] - }, - { - "id": "Task.priority", - "path": "Task.priority", - "short": "routine | urgent | asap | stat", - "definition": "Indicates how quickly the Task should be addressed with respect to other requests.", - "requirements": "Used to identify the service level expected while performing a task.", - "min": 0, - "max": "1", - "base": { - "path": "Task.priority", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "meaningWhenMissing": "If missing, this task should be performed with normal priority", - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "TaskPriority" - } - ], - "strength": "required", - "description": "The task's priority.", - "valueSet": "http://hl7.org/fhir/ValueSet/request-priority|4.0.1" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Request.priority" - }, - { - "identity": "w5", - "map": "FiveWs.grade" - }, - { - "identity": "rim", - "map": ".priorityCode" - } - ] - }, - { - "id": "Task.code", - "path": "Task.code", - "short": "Task Type", - "definition": "A name or code (or both) briefly describing what the task involves.", - "comment": "The title (eg \"My Tasks\", \"Outstanding Tasks for Patient X\") should go into the code.", - "min": 0, - "max": "1", - "base": { - "path": "Task.code", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "TaskCode" - } - ], - "strength": "example", - "description": "Codes to identify what the task involves. These will typically be specific to a particular workflow.", - "valueSet": "http://hl7.org/fhir/ValueSet/task-code" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Request.code, Event.code" - }, - { - "identity": "w5", - "map": "FiveWs.what[x]" - }, - { - "identity": "rim", - "map": ".code" - } - ] - }, - { - "id": "Task.description", - "path": "Task.description", - "short": "Human-readable explanation of task", - "definition": "A free-text description of what is to be performed.", - "min": 0, - "max": "1", - "base": { - "path": "Task.description", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": ".text" - } - ] - }, - { - "id": "Task.focus", - "path": "Task.focus", - "short": "What task is acting on", - "definition": "The request being actioned or the resource being manipulated by this task.", - "comment": "If multiple resources need to be manipulated, use sub-tasks. (This ensures that status can be tracked independently for each referenced resource.).", - "requirements": "Used to identify the thing to be done.", - "min": 1, - "max": "1", - "base": { - "path": "Task.focus", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Specimen" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.what[x]" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=SUBJ].target" - } - ] - }, - { - "id": "Task.for", - "path": "Task.for", - "short": "Beneficiary of the Task", - "definition": "The entity who benefits from the performance of the service specified in the task (e.g., the patient).", - "requirements": "Used to track tasks outstanding for a beneficiary. Do not use to track the task owner or creator (see owner and creator respectively). This can also affect access control.", - "alias": [ - "Patient" - ], - "min": 1, - "max": "1", - "base": { - "path": "Task.for", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Patient" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Request.subject, Event.subject" - }, - { - "identity": "w5", - "map": "FiveWs.subject[x]" - }, - { - "identity": "rim", - "map": ".participation[typeCode=RCT].role" - }, - { - "identity": "w5", - "map": "FiveWs.subject" - } - ] - }, - { - "id": "Task.encounter", - "path": "Task.encounter", - "short": "Healthcare event during which this task originated", - "definition": "The healthcare event (e.g. a patient and healthcare provider interaction) during which this task was created.", - "requirements": "For some tasks it may be important to know the link between the encounter the task originated within.", - "min": 0, - "max": "1", - "base": { - "path": "Task.encounter", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Encounter" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Request.context, Event.context" - }, - { - "identity": "w5", - "map": "FiveWs.context" - }, - { - "identity": "rim", - "map": ".inboundRelationship[typeCode=COMP].source[classCode=PCPR, moodCode=EVN]" - } - ] - }, - { - "id": "Task.executionPeriod", - "path": "Task.executionPeriod", - "short": "Start and end time of execution", - "definition": "Identifies the time action was first taken against the task (start) and/or the time final action was taken against the task prior to marking it as completed (end).", - "min": 0, - "max": "1", - "base": { - "path": "Task.executionPeriod", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Period" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.occurrence[x]" - }, - { - "identity": "w5", - "map": "FiveWs.done[x]" - }, - { - "identity": "rim", - "map": ".effectiveTime" - } - ] - }, - { - "id": "Task.authoredOn", - "path": "Task.authoredOn", - "short": "Task Creation Date", - "definition": "The date and time this task was created.", - "requirements": "Most often used along with lastUpdated to track duration of task to supporting monitoring and management.", - "alias": [ - "Created Date" - ], - "min": 0, - "max": "1", - "base": { - "path": "Task.authoredOn", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "dateTime" - } - ], - "condition": [ - "inv-1" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Request.authoredOn" - }, - { - "identity": "w5", - "map": "FiveWs.recorded" - }, - { - "identity": "rim", - "map": ".participation[typeCode=AUT].time" - } - ] - }, - { - "id": "Task.lastModified", - "path": "Task.lastModified", - "short": "Task Last Modified Date", - "definition": "The date and time of last modification to this task.", - "requirements": "Used along with history to track task activity and time in a particular task state. This enables monitoring and management.", - "alias": [ - "Update Date" - ], - "min": 0, - "max": "1", - "base": { - "path": "Task.lastModified", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "dateTime" - } - ], - "condition": [ - "inv-1" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": ".inboundRelationship[typeCode=SUBJ, ].source[classCode=CACT, moodCode=EVN].effectiveTime" - } - ] - }, - { - "id": "Task.requester", - "path": "Task.requester", - "short": "Who is asking for task to be done", - "definition": "The creator of the task.", - "requirements": "Identifies who created this task. May be used by access control mechanisms (e.g., to ensure that only the creator can cancel a task).", - "min": 0, - "max": "1", - "base": { - "path": "Task.requester", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Device", - "http://hl7.org/fhir/StructureDefinition/Organization", - "http://hl7.org/fhir/StructureDefinition/Patient", - "http://hl7.org/fhir/StructureDefinition/Practitioner", - "http://hl7.org/fhir/StructureDefinition/PractitionerRole", - "http://hl7.org/fhir/StructureDefinition/RelatedPerson" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Request.requester" - }, - { - "identity": "w5", - "map": "FiveWs.author" - }, - { - "identity": "rim", - "map": ".participation[typeCode=AUT].role" - } - ] - }, - { - "id": "Task.performerType", - "path": "Task.performerType", - "short": "Requested performer", - "definition": "The kind of participant that should perform the task.", - "requirements": "Use to distinguish tasks on different activity queues.", - "min": 0, - "max": "*", - "base": { - "path": "Task.performerType", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "TaskPerformerType" - } - ], - "strength": "preferred", - "description": "The type(s) of task performers allowed.", - "valueSet": "http://hl7.org/fhir/ValueSet/performer-role" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.performer.role, Request.performerType" - }, - { - "identity": "w5", - "map": "FiveWs.actor" - }, - { - "identity": "rim", - "map": ".participation[typeCode=PRF].role.code" - } - ] - }, - { - "id": "Task.owner", - "path": "Task.owner", - "short": "Responsible individual", - "definition": "Individual organization or Device currently responsible for task execution.", - "comment": "Tasks may be created with an owner not yet identified.", - "requirements": "Identifies who is expected to perform this task.", - "alias": [ - "Performer", - "Executer" - ], - "min": 1, - "max": "1", - "base": { - "path": "Task.owner", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Organization" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.performer.actor, Request.performer" - }, - { - "identity": "w5", - "map": "FiveWs.actor" - }, - { - "identity": "rim", - "map": ".participation[typeCode=PRF].role" - } - ] - }, - { - "id": "Task.location", - "path": "Task.location", - "short": "Where task occurs", - "definition": "Principal physical location where the this task is performed.", - "requirements": "Ties the event to where the records are likely kept and provides context around the event occurrence (e.g. if it occurred inside or outside a dedicated healthcare setting).", - "min": 0, - "max": "1", - "base": { - "path": "Task.location", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Location" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Request.reasonCode, Event.reasonCode" - }, - { - "identity": "w5", - "map": "FiveWs.where[x]" - }, - { - "identity": "rim", - "map": ".participation[typeCode=LOC].role" - } - ] - }, - { - "id": "Task.reasonCode", - "path": "Task.reasonCode", - "short": "Why task is needed", - "definition": "A description or code indicating why this task needs to be performed.", - "comment": "This should only be included if there is no focus or if it differs from the reason indicated on the focus.", - "min": 0, - "max": "1", - "base": { - "path": "Task.reasonCode", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "TaskReason" - } - ], - "strength": "example", - "description": "Indicates why the task is needed. E.g. Suspended because patient admitted to hospital." - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.location" - }, - { - "identity": "w5", - "map": "FiveWs.why[x]" - }, - { - "identity": "v2", - "map": "EVN.7" - }, - { - "identity": "rim", - "map": ".reasonCode" - } - ] - }, - { - "id": "Task.reasonReference", - "path": "Task.reasonReference", - "short": "Why task is needed", - "definition": "A resource reference indicating why this task needs to be performed.", - "comment": "Tasks might be justified based on an Observation, a Condition, a past or planned procedure, etc. This should only be included if there is no focus or if it differs from the reason indicated on the focus. Use the CodeableConcept text element in `Task.reasonCode` if the data is free (uncoded) text.", - "min": 0, - "max": "1", - "base": { - "path": "Task.reasonReference", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Resource" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Request.reasonReference, Event.reasonReference" - }, - { - "identity": "w5", - "map": "FiveWs.why[x]" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=RSON].target" - } - ] - }, - { - "id": "Task.insurance", - "path": "Task.insurance", - "short": "Associated insurance coverage", - "definition": "Insurance plans, coverage extensions, pre-authorizations and/or pre-determinations that may be relevant to the Task.", - "min": 0, - "max": "*", - "base": { - "path": "Task.insurance", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Coverage", - "http://hl7.org/fhir/StructureDefinition/ClaimResponse" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Request.insurance" - }, - { - "identity": "v2", - "map": "IN1/IN2" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=COVBY].target" - } - ] - }, - { - "id": "Task.note", - "path": "Task.note", - "short": "Comments made about the task", - "definition": "Free-text information captured about the task as it progresses.", - "min": 0, - "max": "*", - "base": { - "path": "Task.note", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Annotation" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Request.note, Event.note" - }, - { - "identity": "rim", - "map": ".inboundRelationship[typeCode=SUBJ, ].source[classCode=OBS, moodCode=EVN, code=\"annotation\"].value(string)" - } - ] - }, - { - "id": "Task.relevantHistory", - "path": "Task.relevantHistory", - "short": "Key events in history of the Task", - "definition": "Links to Provenance records for past versions of this Task that identify key state transitions or updates that are likely to be relevant to a user looking at the current version of the task.", - "comment": "This element does not point to the Provenance associated with the *current* version of the resource - as it would be created after this version existed. The Provenance for the current version can be retrieved with a _revinclude.", - "alias": [ - "Status History" - ], - "min": 0, - "max": "*", - "base": { - "path": "Task.relevantHistory", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Provenance" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Request.relevantHistory" - }, - { - "identity": "rim", - "map": ".inboundRelationship(typeCode=SUBJ].source[classCode=CACT, moodCode=EVN]" - } - ] - }, - { - "id": "Task.restriction", - "path": "Task.restriction", - "short": "Constraints on fulfillment tasks", - "definition": "If the Task.focus is a request resource and the task is seeking fulfillment (i.e. is asking for the request to be actioned), this element identifies any limitations on what parts of the referenced request should be actioned.", - "requirements": "Sometimes when fulfillment is sought, you don't want full fulfillment.", - "min": 0, - "max": "1", - "base": { - "path": "Task.restriction", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Instead of pointing to request, would point to component of request, having these characteristics" - } - ] - }, - { - "id": "Task.restriction.id", - "path": "Task.restriction.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Task.restriction.extension", - "path": "Task.restriction.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Task.restriction.modifierExtension", - "path": "Task.restriction.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Task.restriction.repetitions", - "path": "Task.restriction.repetitions", - "short": "How many times to repeat", - "definition": "Indicates the number of times the requested action should occur.", - "requirements": "E.g. order that requests monthly lab tests, fulfillment is sought for 1.", - "min": 0, - "max": "1", - "base": { - "path": "Task.restriction.repetitions", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "positiveInt" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": ".repeatNumber" - } - ] - }, - { - "id": "Task.restriction.period", - "path": "Task.restriction.period", - "short": "When fulfillment sought", - "definition": "Over what time-period is fulfillment sought.", - "comment": "Note that period.high is the due date representing the time by which the task should be completed.", - "requirements": "E.g. order that authorizes 1 year's services. Fulfillment is sought for next 3 months.", - "min": 0, - "max": "1", - "base": { - "path": "Task.restriction.period", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Period" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": ".effectiveTime(IVL<TS>)" - } - ] - }, - { - "id": "Task.restriction.recipient", - "path": "Task.restriction.recipient", - "short": "For whom is fulfillment sought?", - "definition": "For requests that are targeted to more than on potential recipient/target, for whom is fulfillment sought?", - "min": 0, - "max": "*", - "base": { - "path": "Task.restriction.recipient", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Patient", - "http://hl7.org/fhir/StructureDefinition/Practitioner", - "http://hl7.org/fhir/StructureDefinition/PractitionerRole", - "http://hl7.org/fhir/StructureDefinition/RelatedPerson", - "http://hl7.org/fhir/StructureDefinition/Group", - "http://hl7.org/fhir/StructureDefinition/Organization" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": ".participation[typeCode=SBJ].role" - } - ] - }, - { - "id": "Task.input", - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-explicit-type-name", - "valueString": "Parameter" - } - ], - "path": "Task.input", - "short": "Information used to perform task", - "definition": "Additional information that may be needed in the execution of the task.", - "requirements": "Resources and data used to perform the task. This data is used in the business logic of task execution, and is stored separately because it varies between workflows.", - "alias": [ - "Supporting Information" - ], - "min": 0, - "max": "*", - "base": { - "path": "Task.input", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "???" - } - ] - }, - { - "id": "Task.input.id", - "path": "Task.input.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Task.input.extension", - "path": "Task.input.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Task.input.modifierExtension", - "path": "Task.input.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Task.input.type", - "path": "Task.input.type", - "short": "Label for the input", - "definition": "A code or description indicating how the input is intended to be used as part of the task execution.", - "comment": "If referencing a BPMN workflow or Protocol, the \"system\" is the URL for the workflow definition and the code is the \"name\" of the required input.", - "requirements": "Inputs are named to enable task automation to bind data and pass it from one task to the next.", - "alias": [ - "Name" - ], - "min": 1, - "max": "1", - "base": { - "path": "Task.input.type", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "TaskInputParameterType" - } - ], - "strength": "example", - "description": "Codes to identify types of input parameters. These will typically be specific to a particular workflow. E.g. \"Comparison source\", \"Applicable consent\", \"Concomitent Medications\", etc." - }, - "mapping": [ - { - "identity": "rim", - "map": "???" - } - ] - }, - { - "id": "Task.input.value[x]", - "path": "Task.input.value[x]", - "short": "Content to use in performing the task", - "definition": "The value of the input parameter as a basic type.", - "min": 1, - "max": "1", - "base": { - "path": "Task.input.value[x]", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "base64Binary" - }, - { - "code": "boolean" - }, - { - "code": "canonical" - }, - { - "code": "code" - }, - { - "code": "date" - }, - { - "code": "dateTime" - }, - { - "code": "decimal" - }, - { - "code": "id" - }, - { - "code": "instant" - }, - { - "code": "integer" - }, - { - "code": "markdown" - }, - { - "code": "oid" - }, - { - "code": "positiveInt" - }, - { - "code": "string" - }, - { - "code": "time" - }, - { - "code": "unsignedInt" - }, - { - "code": "uri" - }, - { - "code": "url" - }, - { - "code": "uuid" - }, - { - "code": "Address" - }, - { - "code": "Age" - }, - { - "code": "Annotation" - }, - { - "code": "Attachment" - }, - { - "code": "CodeableConcept" - }, - { - "code": "Coding" - }, - { - "code": "ContactPoint" - }, - { - "code": "Count" - }, - { - "code": "Distance" - }, - { - "code": "Duration" - }, - { - "code": "HumanName" - }, - { - "code": "Identifier" - }, - { - "code": "Money" - }, - { - "code": "Period" - }, - { - "code": "Quantity" - }, - { - "code": "Range" - }, - { - "code": "Ratio" - }, - { - "code": "Reference" - }, - { - "code": "SampledData" - }, - { - "code": "Signature" - }, - { - "code": "Timing" - }, - { - "code": "ContactDetail" - }, - { - "code": "Contributor" - }, - { - "code": "DataRequirement" - }, - { - "code": "Expression" - }, - { - "code": "ParameterDefinition" - }, - { - "code": "RelatedArtifact" - }, - { - "code": "TriggerDefinition" - }, - { - "code": "UsageContext" - }, - { - "code": "Dosage" - }, - { - "code": "Meta" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "???" - } - ] - }, - { - "id": "Task.output", - "path": "Task.output", - "short": "Information produced as part of task", - "definition": "Outputs produced by the Task.", - "requirements": "Resources and data produced during the execution the task. This data is generated by the business logic of task execution, and is stored separately because it varies between workflows.", - "min": 0, - "max": "*", - "base": { - "path": "Task.output", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "???" - } - ] - }, - { - "id": "Task.output.id", - "path": "Task.output.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Task.output.extension", - "path": "Task.output.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Task.output.modifierExtension", - "path": "Task.output.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Task.output.type", - "path": "Task.output.type", - "short": "Label for output", - "definition": "The name of the Output parameter.", - "requirements": "Outputs are named to enable task automation to bind data and pass it from one task to the next.", - "alias": [ - "Name" - ], - "min": 1, - "max": "1", - "base": { - "path": "Task.output.type", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "TaskOutputParameterType" - } - ], - "strength": "example", - "description": "Codes to identify types of input parameters. These will typically be specific to a particular workflow. E.g. \"Identified issues\", \"Preliminary results\", \"Filler order\", \"Final results\", etc." - }, - "mapping": [ - { - "identity": "rim", - "map": "???" - } - ] - }, - { - "id": "Task.output.value[x]", - "path": "Task.output.value[x]", - "short": "Result of output", - "definition": "The value of the Output parameter as a basic type.", - "requirements": "Task outputs can take any form.", - "min": 1, - "max": "1", - "base": { - "path": "Task.output.value[x]", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "base64Binary" - }, - { - "code": "boolean" - }, - { - "code": "canonical" - }, - { - "code": "code" - }, - { - "code": "date" - }, - { - "code": "dateTime" - }, - { - "code": "decimal" - }, - { - "code": "id" - }, - { - "code": "instant" - }, - { - "code": "integer" - }, - { - "code": "markdown" - }, - { - "code": "oid" - }, - { - "code": "positiveInt" - }, - { - "code": "string" - }, - { - "code": "time" - }, - { - "code": "unsignedInt" - }, - { - "code": "uri" - }, - { - "code": "url" - }, - { - "code": "uuid" - }, - { - "code": "Address" - }, - { - "code": "Age" - }, - { - "code": "Annotation" - }, - { - "code": "Attachment" - }, - { - "code": "CodeableConcept" - }, - { - "code": "Coding" - }, - { - "code": "ContactPoint" - }, - { - "code": "Count" - }, - { - "code": "Distance" - }, - { - "code": "Duration" - }, - { - "code": "HumanName" - }, - { - "code": "Identifier" - }, - { - "code": "Money" - }, - { - "code": "Period" - }, - { - "code": "Quantity" - }, - { - "code": "Range" - }, - { - "code": "Ratio" - }, - { - "code": "Reference" - }, - { - "code": "SampledData" - }, - { - "code": "Signature" - }, - { - "code": "Timing" - }, - { - "code": "ContactDetail" - }, - { - "code": "Contributor" - }, - { - "code": "DataRequirement" - }, - { - "code": "Expression" - }, - { - "code": "ParameterDefinition" - }, - { - "code": "RelatedArtifact" - }, - { - "code": "TriggerDefinition" - }, - { - "code": "UsageContext" - }, - { - "code": "Dosage" - }, - { - "code": "Meta" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "???" - } - ] - } - ] - }, - "differential": { - "element": [ - { - "id": "Task", - "path": "Task" - }, - { - "id": "Task.focus", - "path": "Task.focus", - "min": 1, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Specimen" - ] - } - ] - }, - { - "id": "Task.for", - "path": "Task.for", - "min": 1, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Patient" - ] - } - ] - }, - { - "id": "Task.owner", - "path": "Task.owner", - "min": 1, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Organization" - ] - } - ] - } - ] - } +{ + "resourceType" : "StructureDefinition", + "id" : "ncpi-specimen-task", + "text" : { + "status" : "extensions", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-specimen-task-definitions.html#Task\">Task</a><a name=\"Task\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/task.html\">Task</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">A task to be performed</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-specimen-task-definitions.html#Task.focus\">focus</a><a name=\"Task.focus\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/specimen.html\">Specimen</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">What task is acting on</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-specimen-task-definitions.html#Task.for\">for</a><a name=\"Task.for\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/patient.html\">Patient</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Beneficiary of the Task</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-specimen-task-definitions.html#Task.owner\">owner</a><a name=\"Task.owner\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/organization.html\">Organization</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Responsible individual</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" + }, + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", + "valueString" : "Base.Workflow" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", + "valueCode" : "not-classified" + }], + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-specimen-task", + "version" : "0.2.0", + "name" : "SpecimenTask", + "title" : "Research Task", + "status" : "draft", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "A FHIR analysis task that takes at least one specimen as input and produces at least one document.", + "fhirVersion" : "4.0.1", + "mapping" : [{ + "identity" : "workflow", + "uri" : "http://hl7.org/fhir/workflow", + "name" : "Workflow Pattern" + }, + { + "identity" : "rim", + "uri" : "http://hl7.org/v3", + "name" : "RIM Mapping" + }, + { + "identity" : "w5", + "uri" : "http://hl7.org/fhir/fivews", + "name" : "FiveWs Pattern Mapping" + }, + { + "identity" : "v2", + "uri" : "http://hl7.org/v2", + "name" : "HL7 v2 Mapping" + }], + "kind" : "resource", + "abstract" : false, + "type" : "Task", + "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/Task", + "derivation" : "constraint", + "snapshot" : { + "element" : [{ + "id" : "Task", + "path" : "Task", + "short" : "A task to be performed", + "definition" : "A task to be performed.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Task", + "min" : 0, + "max" : "*" + }, + "constraint" : [{ + "key" : "dom-2", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL NOT contain nested Resources", + "expression" : "contained.contained.empty()", + "xpath" : "not(parent::f:contained and f:contained)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-3", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", + "expression" : "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", + "xpath" : "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-4", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", + "expression" : "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-5", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a security label", + "expression" : "contained.meta.security.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:security))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", + "valueBoolean" : true + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", + "valueMarkdown" : "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." + }], + "key" : "dom-6", + "severity" : "warning", + "human" : "A resource should have narrative for robust management", + "expression" : "text.`div`.exists()", + "xpath" : "exists(f:text/h:div)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "inv-1", + "severity" : "error", + "human" : "Last modified date must be greater than or equal to authored-on date.", + "expression" : "lastModified.exists().not() or authoredOn.exists().not() or lastModified >= authoredOn", + "xpath" : "not(exists(f:lastModified/@value)) or not(exists(f:authoredOn/@value)) or f:lastModified/@value >= f:authoredOn/@value", + "source" : "http://hl7.org/fhir/StructureDefinition/Task" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Entity. Role, or Act" + }, + { + "identity" : "workflow", + "map" : "Request, Event" + }, + { + "identity" : "rim", + "map" : "ControlAct[moodCode=INT]" + }] + }, + { + "id" : "Task.id", + "path" : "Task.id", + "short" : "Logical id of this artifact", + "definition" : "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", + "comment" : "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "id" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "Task.meta", + "path" : "Task.meta", + "short" : "Metadata about the resource", + "definition" : "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.meta", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Meta" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "Task.implicitRules", + "path" : "Task.implicitRules", + "short" : "A set of rules under which this content was created", + "definition" : "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", + "comment" : "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.implicitRules", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", + "isSummary" : true + }, + { + "id" : "Task.language", + "path" : "Task.language", + "short" : "Language of the resource content", + "definition" : "The base language in which the resource is written.", + "comment" : "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.language", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", + "valueCanonical" : "http://hl7.org/fhir/ValueSet/all-languages" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "Language" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "preferred", + "description" : "A human language.", + "valueSet" : "http://hl7.org/fhir/ValueSet/languages" + } + }, + { + "id" : "Task.text", + "path" : "Task.text", + "short" : "Text summary of the resource, for human interpretation", + "definition" : "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", + "comment" : "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", + "alias" : ["narrative", + "html", + "xhtml", + "display"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "DomainResource.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Narrative" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Act.text?" + }] + }, + { + "id" : "Task.contained", + "path" : "Task.contained", + "short" : "Contained, inline Resources", + "definition" : "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", + "comment" : "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", + "alias" : ["inline resources", + "anonymous resources", + "contained resources"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.contained", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Resource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Task.extension", + "path" : "Task.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Task.modifierExtension", + "path" : "Task.modifierExtension", + "short" : "Extensions that cannot be ignored", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Task.identifier", + "path" : "Task.identifier", + "short" : "Task Instance Identifier", + "definition" : "The business identifier for this task.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Task.identifier", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Identifier" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Request.identifier, Event.identifier" + }, + { + "identity" : "w5", + "map" : "FiveWs.identifier" + }, + { + "identity" : "rim", + "map" : ".id" + }] + }, + { + "id" : "Task.instantiatesCanonical", + "path" : "Task.instantiatesCanonical", + "short" : "Formal definition of task", + "definition" : "The URL pointing to a *FHIR*-defined protocol, guideline, orderset or other definition that is adhered to in whole or in part by this Task.", + "requirements" : "Enables a formal definition of how he task is to be performed, enabling automation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.instantiatesCanonical", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "canonical", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/ActivityDefinition"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Request.instantiatesCanonical, Event.instantiatesCanonical" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=DEFN].target" + }] + }, + { + "id" : "Task.instantiatesUri", + "path" : "Task.instantiatesUri", + "short" : "Formal definition of task", + "definition" : "The URL pointing to an *externally* maintained protocol, guideline, orderset or other definition that is adhered to in whole or in part by this Task.", + "requirements" : "Enables a formal definition of how he task is to be performed (e.g. using BPMN, BPEL, XPDL or other formal notation to be associated with a task), enabling automation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.instantiatesUri", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.instantiatesUrl" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=DEFN].target" + }] + }, + { + "id" : "Task.basedOn", + "path" : "Task.basedOn", + "short" : "Request fulfilled by this task", + "definition" : "BasedOn refers to a higher-level authorization that triggered the creation of the task. It references a \"request\" resource such as a ServiceRequest, MedicationRequest, ServiceRequest, CarePlan, etc. which is distinct from the \"request\" resource the task is seeking to fulfill. This latter resource is referenced by FocusOn. For example, based on a ServiceRequest (= BasedOn), a task is created to fulfill a procedureRequest ( = FocusOn ) to collect a specimen from a patient.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Task.basedOn", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Resource"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Request.basedOn, Event.basedOn" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=FLFS].target[moodCode=INT]" + }] + }, + { + "id" : "Task.groupIdentifier", + "path" : "Task.groupIdentifier", + "short" : "Requisition or grouper id", + "definition" : "An identifier that links together multiple tasks and other requests that were created in the same context.", + "requirements" : "Billing and/or reporting can be linked to whether multiple requests were created as a single unit.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.groupIdentifier", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Identifier" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Request.groupIdentifier" + }, + { + "identity" : "rim", + "map" : ".inboundRelationship[typeCode=COMP].source[moodCode=INT].id" + }] + }, + { + "id" : "Task.partOf", + "path" : "Task.partOf", + "short" : "Composite task", + "definition" : "Task that this particular task is part of.", + "comment" : "This should usually be 0..1.", + "requirements" : "Allows tasks to be broken down into sub-steps (and this division can occur independent of the original task).", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Task.partOf", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Task"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.partOf" + }, + { + "identity" : "rim", + "map" : ".inboundRelationship[typeCode=COMP].source[moodCode=INT]" + }] + }, + { + "id" : "Task.status", + "path" : "Task.status", + "short" : "draft | requested | received | accepted | +", + "definition" : "The current status of the task.", + "requirements" : "These states enable coordination of task status with off-the-shelf workflow solutions that support automation of tasks.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Task.status", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid", + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "TaskStatus" + }], + "strength" : "required", + "description" : "The current status of the task.", + "valueSet" : "http://hl7.org/fhir/ValueSet/task-status|4.0.1" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Request.status, Event.status" + }, + { + "identity" : "w5", + "map" : "FiveWs.status" + }, + { + "identity" : "rim", + "map" : ".statusCode" + }] + }, + { + "id" : "Task.statusReason", + "path" : "Task.statusReason", + "short" : "Reason for current status", + "definition" : "An explanation as to why this task is held, failed, was refused, etc.", + "comment" : "This applies to the current status. Look at the history of the task to see reasons for past statuses.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.statusReason", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "TaskStatusReason" + }], + "strength" : "example", + "description" : "Codes to identify the reason for current status. These will typically be specific to a particular workflow." + }, + "mapping" : [{ + "identity" : "rim", + "map" : ".inboundRelationship[typeCode=SUBJ].source[classCode=CACT, moodCode=EVN, code=\"status change\"].reasonCode" + }] + }, + { + "id" : "Task.businessStatus", + "path" : "Task.businessStatus", + "short" : "E.g. \"Specimen collected\", \"IV prepped\"", + "definition" : "Contains business-specific nuances of the business state.", + "requirements" : "There's often a need to track substates of a task - this is often variable by specific workflow implementation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.businessStatus", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "TaskBusinessStatus" + }], + "strength" : "example", + "description" : "The domain-specific business-contextual sub-state of the task. For example: \"Blood drawn\", \"IV inserted\", \"Awaiting physician signature\", etc." + }, + "mapping" : [{ + "identity" : "rim", + "map" : ".inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"business status\"]" + }] + }, + { + "id" : "Task.intent", + "path" : "Task.intent", + "short" : "unknown | proposal | plan | order | original-order | reflex-order | filler-order | instance-order | option", + "definition" : "Indicates the \"level\" of actionability associated with the Task, i.e. i+R[9]Cs this a proposed task, a planned task, an actionable task, etc.", + "comment" : "This element is immutable. Proposed tasks, planned tasks, etc. must be distinct instances.\n\nIn most cases, Tasks will have an intent of \"order\".", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Task.intent", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "TaskIntent" + }], + "strength" : "required", + "description" : "Distinguishes whether the task is a proposal, plan or full order.", + "valueSet" : "http://hl7.org/fhir/ValueSet/task-intent|4.0.1" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Request.intent" + }, + { + "identity" : "w5", + "map" : "FiveWs.class" + }, + { + "identity" : "rim", + "map" : ".moodCode" + }] + }, + { + "id" : "Task.priority", + "path" : "Task.priority", + "short" : "routine | urgent | asap | stat", + "definition" : "Indicates how quickly the Task should be addressed with respect to other requests.", + "requirements" : "Used to identify the service level expected while performing a task.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.priority", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "meaningWhenMissing" : "If missing, this task should be performed with normal priority", + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "TaskPriority" + }], + "strength" : "required", + "description" : "The task's priority.", + "valueSet" : "http://hl7.org/fhir/ValueSet/request-priority|4.0.1" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Request.priority" + }, + { + "identity" : "w5", + "map" : "FiveWs.grade" + }, + { + "identity" : "rim", + "map" : ".priorityCode" + }] + }, + { + "id" : "Task.code", + "path" : "Task.code", + "short" : "Task Type", + "definition" : "A name or code (or both) briefly describing what the task involves.", + "comment" : "The title (eg \"My Tasks\", \"Outstanding Tasks for Patient X\") should go into the code.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.code", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "TaskCode" + }], + "strength" : "example", + "description" : "Codes to identify what the task involves. These will typically be specific to a particular workflow.", + "valueSet" : "http://hl7.org/fhir/ValueSet/task-code" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Request.code, Event.code" + }, + { + "identity" : "w5", + "map" : "FiveWs.what[x]" + }, + { + "identity" : "rim", + "map" : ".code" + }] + }, + { + "id" : "Task.description", + "path" : "Task.description", + "short" : "Human-readable explanation of task", + "definition" : "A free-text description of what is to be performed.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.description", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : ".text" + }] + }, + { + "id" : "Task.focus", + "path" : "Task.focus", + "short" : "What task is acting on", + "definition" : "The request being actioned or the resource being manipulated by this task.", + "comment" : "If multiple resources need to be manipulated, use sub-tasks. (This ensures that status can be tracked independently for each referenced resource.).", + "requirements" : "Used to identify the thing to be done.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Task.focus", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Specimen"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.what[x]" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=SUBJ].target" + }] + }, + { + "id" : "Task.for", + "path" : "Task.for", + "short" : "Beneficiary of the Task", + "definition" : "The entity who benefits from the performance of the service specified in the task (e.g., the patient).", + "requirements" : "Used to track tasks outstanding for a beneficiary. Do not use to track the task owner or creator (see owner and creator respectively). This can also affect access control.", + "alias" : ["Patient"], + "min" : 1, + "max" : "1", + "base" : { + "path" : "Task.for", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Patient"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Request.subject, Event.subject" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject[x]" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=RCT].role" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject" + }] + }, + { + "id" : "Task.encounter", + "path" : "Task.encounter", + "short" : "Healthcare event during which this task originated", + "definition" : "The healthcare event (e.g. a patient and healthcare provider interaction) during which this task was created.", + "requirements" : "For some tasks it may be important to know the link between the encounter the task originated within.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.encounter", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Encounter"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Request.context, Event.context" + }, + { + "identity" : "w5", + "map" : "FiveWs.context" + }, + { + "identity" : "rim", + "map" : ".inboundRelationship[typeCode=COMP].source[classCode=PCPR, moodCode=EVN]" + }] + }, + { + "id" : "Task.executionPeriod", + "path" : "Task.executionPeriod", + "short" : "Start and end time of execution", + "definition" : "Identifies the time action was first taken against the task (start) and/or the time final action was taken against the task prior to marking it as completed (end).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.executionPeriod", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Period" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.occurrence[x]" + }, + { + "identity" : "w5", + "map" : "FiveWs.done[x]" + }, + { + "identity" : "rim", + "map" : ".effectiveTime" + }] + }, + { + "id" : "Task.authoredOn", + "path" : "Task.authoredOn", + "short" : "Task Creation Date", + "definition" : "The date and time this task was created.", + "requirements" : "Most often used along with lastUpdated to track duration of task to supporting monitoring and management.", + "alias" : ["Created Date"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.authoredOn", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "dateTime" + }], + "condition" : ["inv-1"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Request.authoredOn" + }, + { + "identity" : "w5", + "map" : "FiveWs.recorded" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=AUT].time" + }] + }, + { + "id" : "Task.lastModified", + "path" : "Task.lastModified", + "short" : "Task Last Modified Date", + "definition" : "The date and time of last modification to this task.", + "requirements" : "Used along with history to track task activity and time in a particular task state. This enables monitoring and management.", + "alias" : ["Update Date"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.lastModified", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "dateTime" + }], + "condition" : ["inv-1"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : ".inboundRelationship[typeCode=SUBJ, ].source[classCode=CACT, moodCode=EVN].effectiveTime" + }] + }, + { + "id" : "Task.requester", + "path" : "Task.requester", + "short" : "Who is asking for task to be done", + "definition" : "The creator of the task.", + "requirements" : "Identifies who created this task. May be used by access control mechanisms (e.g., to ensure that only the creator can cancel a task).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.requester", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Device", + "http://hl7.org/fhir/StructureDefinition/Organization", + "http://hl7.org/fhir/StructureDefinition/Patient", + "http://hl7.org/fhir/StructureDefinition/Practitioner", + "http://hl7.org/fhir/StructureDefinition/PractitionerRole", + "http://hl7.org/fhir/StructureDefinition/RelatedPerson"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Request.requester" + }, + { + "identity" : "w5", + "map" : "FiveWs.author" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=AUT].role" + }] + }, + { + "id" : "Task.performerType", + "path" : "Task.performerType", + "short" : "Requested performer", + "definition" : "The kind of participant that should perform the task.", + "requirements" : "Use to distinguish tasks on different activity queues.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Task.performerType", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "TaskPerformerType" + }], + "strength" : "preferred", + "description" : "The type(s) of task performers allowed.", + "valueSet" : "http://hl7.org/fhir/ValueSet/performer-role" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.performer.role, Request.performerType" + }, + { + "identity" : "w5", + "map" : "FiveWs.actor" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=PRF].role.code" + }] + }, + { + "id" : "Task.owner", + "path" : "Task.owner", + "short" : "Responsible individual", + "definition" : "Individual organization or Device currently responsible for task execution.", + "comment" : "Tasks may be created with an owner not yet identified.", + "requirements" : "Identifies who is expected to perform this task.", + "alias" : ["Performer", + "Executer"], + "min" : 1, + "max" : "1", + "base" : { + "path" : "Task.owner", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Organization"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.performer.actor, Request.performer" + }, + { + "identity" : "w5", + "map" : "FiveWs.actor" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=PRF].role" + }] + }, + { + "id" : "Task.location", + "path" : "Task.location", + "short" : "Where task occurs", + "definition" : "Principal physical location where the this task is performed.", + "requirements" : "Ties the event to where the records are likely kept and provides context around the event occurrence (e.g. if it occurred inside or outside a dedicated healthcare setting).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.location", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Location"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Request.reasonCode, Event.reasonCode" + }, + { + "identity" : "w5", + "map" : "FiveWs.where[x]" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=LOC].role" + }] + }, + { + "id" : "Task.reasonCode", + "path" : "Task.reasonCode", + "short" : "Why task is needed", + "definition" : "A description or code indicating why this task needs to be performed.", + "comment" : "This should only be included if there is no focus or if it differs from the reason indicated on the focus.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.reasonCode", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "TaskReason" + }], + "strength" : "example", + "description" : "Indicates why the task is needed. E.g. Suspended because patient admitted to hospital." + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.location" + }, + { + "identity" : "w5", + "map" : "FiveWs.why[x]" + }, + { + "identity" : "v2", + "map" : "EVN.7" + }, + { + "identity" : "rim", + "map" : ".reasonCode" + }] + }, + { + "id" : "Task.reasonReference", + "path" : "Task.reasonReference", + "short" : "Why task is needed", + "definition" : "A resource reference indicating why this task needs to be performed.", + "comment" : "Tasks might be justified based on an Observation, a Condition, a past or planned procedure, etc. This should only be included if there is no focus or if it differs from the reason indicated on the focus. Use the CodeableConcept text element in `Task.reasonCode` if the data is free (uncoded) text.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.reasonReference", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Resource"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Request.reasonReference, Event.reasonReference" + }, + { + "identity" : "w5", + "map" : "FiveWs.why[x]" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=RSON].target" + }] + }, + { + "id" : "Task.insurance", + "path" : "Task.insurance", + "short" : "Associated insurance coverage", + "definition" : "Insurance plans, coverage extensions, pre-authorizations and/or pre-determinations that may be relevant to the Task.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Task.insurance", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Coverage", + "http://hl7.org/fhir/StructureDefinition/ClaimResponse"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Request.insurance" + }, + { + "identity" : "v2", + "map" : "IN1/IN2" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=COVBY].target" + }] + }, + { + "id" : "Task.note", + "path" : "Task.note", + "short" : "Comments made about the task", + "definition" : "Free-text information captured about the task as it progresses.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Task.note", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Annotation" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Request.note, Event.note" + }, + { + "identity" : "rim", + "map" : ".inboundRelationship[typeCode=SUBJ, ].source[classCode=OBS, moodCode=EVN, code=\"annotation\"].value(string)" + }] + }, + { + "id" : "Task.relevantHistory", + "path" : "Task.relevantHistory", + "short" : "Key events in history of the Task", + "definition" : "Links to Provenance records for past versions of this Task that identify key state transitions or updates that are likely to be relevant to a user looking at the current version of the task.", + "comment" : "This element does not point to the Provenance associated with the *current* version of the resource - as it would be created after this version existed. The Provenance for the current version can be retrieved with a _revinclude.", + "alias" : ["Status History"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Task.relevantHistory", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Provenance"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Request.relevantHistory" + }, + { + "identity" : "rim", + "map" : ".inboundRelationship(typeCode=SUBJ].source[classCode=CACT, moodCode=EVN]" + }] + }, + { + "id" : "Task.restriction", + "path" : "Task.restriction", + "short" : "Constraints on fulfillment tasks", + "definition" : "If the Task.focus is a request resource and the task is seeking fulfillment (i.e. is asking for the request to be actioned), this element identifies any limitations on what parts of the referenced request should be actioned.", + "requirements" : "Sometimes when fulfillment is sought, you don't want full fulfillment.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.restriction", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Instead of pointing to request, would point to component of request, having these characteristics" + }] + }, + { + "id" : "Task.restriction.id", + "path" : "Task.restriction.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Task.restriction.extension", + "path" : "Task.restriction.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Task.restriction.modifierExtension", + "path" : "Task.restriction.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Task.restriction.repetitions", + "path" : "Task.restriction.repetitions", + "short" : "How many times to repeat", + "definition" : "Indicates the number of times the requested action should occur.", + "requirements" : "E.g. order that requests monthly lab tests, fulfillment is sought for 1.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.restriction.repetitions", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "positiveInt" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : ".repeatNumber" + }] + }, + { + "id" : "Task.restriction.period", + "path" : "Task.restriction.period", + "short" : "When fulfillment sought", + "definition" : "Over what time-period is fulfillment sought.", + "comment" : "Note that period.high is the due date representing the time by which the task should be completed.", + "requirements" : "E.g. order that authorizes 1 year's services. Fulfillment is sought for next 3 months.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Task.restriction.period", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Period" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : ".effectiveTime(IVL<TS>)" + }] + }, + { + "id" : "Task.restriction.recipient", + "path" : "Task.restriction.recipient", + "short" : "For whom is fulfillment sought?", + "definition" : "For requests that are targeted to more than on potential recipient/target, for whom is fulfillment sought?", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Task.restriction.recipient", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Patient", + "http://hl7.org/fhir/StructureDefinition/Practitioner", + "http://hl7.org/fhir/StructureDefinition/PractitionerRole", + "http://hl7.org/fhir/StructureDefinition/RelatedPerson", + "http://hl7.org/fhir/StructureDefinition/Group", + "http://hl7.org/fhir/StructureDefinition/Organization"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : ".participation[typeCode=SBJ].role" + }] + }, + { + "id" : "Task.input", + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-explicit-type-name", + "valueString" : "Parameter" + }], + "path" : "Task.input", + "short" : "Information used to perform task", + "definition" : "Additional information that may be needed in the execution of the task.", + "requirements" : "Resources and data used to perform the task. This data is used in the business logic of task execution, and is stored separately because it varies between workflows.", + "alias" : ["Supporting Information"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Task.input", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "???" + }] + }, + { + "id" : "Task.input.id", + "path" : "Task.input.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Task.input.extension", + "path" : "Task.input.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Task.input.modifierExtension", + "path" : "Task.input.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Task.input.type", + "path" : "Task.input.type", + "short" : "Label for the input", + "definition" : "A code or description indicating how the input is intended to be used as part of the task execution.", + "comment" : "If referencing a BPMN workflow or Protocol, the \"system\" is the URL for the workflow definition and the code is the \"name\" of the required input.", + "requirements" : "Inputs are named to enable task automation to bind data and pass it from one task to the next.", + "alias" : ["Name"], + "min" : 1, + "max" : "1", + "base" : { + "path" : "Task.input.type", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "TaskInputParameterType" + }], + "strength" : "example", + "description" : "Codes to identify types of input parameters. These will typically be specific to a particular workflow. E.g. \"Comparison source\", \"Applicable consent\", \"Concomitent Medications\", etc." + }, + "mapping" : [{ + "identity" : "rim", + "map" : "???" + }] + }, + { + "id" : "Task.input.value[x]", + "path" : "Task.input.value[x]", + "short" : "Content to use in performing the task", + "definition" : "The value of the input parameter as a basic type.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Task.input.value[x]", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "base64Binary" + }, + { + "code" : "boolean" + }, + { + "code" : "canonical" + }, + { + "code" : "code" + }, + { + "code" : "date" + }, + { + "code" : "dateTime" + }, + { + "code" : "decimal" + }, + { + "code" : "id" + }, + { + "code" : "instant" + }, + { + "code" : "integer" + }, + { + "code" : "markdown" + }, + { + "code" : "oid" + }, + { + "code" : "positiveInt" + }, + { + "code" : "string" + }, + { + "code" : "time" + }, + { + "code" : "unsignedInt" + }, + { + "code" : "uri" + }, + { + "code" : "url" + }, + { + "code" : "uuid" + }, + { + "code" : "Address" + }, + { + "code" : "Age" + }, + { + "code" : "Annotation" + }, + { + "code" : "Attachment" + }, + { + "code" : "CodeableConcept" + }, + { + "code" : "Coding" + }, + { + "code" : "ContactPoint" + }, + { + "code" : "Count" + }, + { + "code" : "Distance" + }, + { + "code" : "Duration" + }, + { + "code" : "HumanName" + }, + { + "code" : "Identifier" + }, + { + "code" : "Money" + }, + { + "code" : "Period" + }, + { + "code" : "Quantity" + }, + { + "code" : "Range" + }, + { + "code" : "Ratio" + }, + { + "code" : "Reference" + }, + { + "code" : "SampledData" + }, + { + "code" : "Signature" + }, + { + "code" : "Timing" + }, + { + "code" : "ContactDetail" + }, + { + "code" : "Contributor" + }, + { + "code" : "DataRequirement" + }, + { + "code" : "Expression" + }, + { + "code" : "ParameterDefinition" + }, + { + "code" : "RelatedArtifact" + }, + { + "code" : "TriggerDefinition" + }, + { + "code" : "UsageContext" + }, + { + "code" : "Dosage" + }, + { + "code" : "Meta" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "???" + }] + }, + { + "id" : "Task.output", + "path" : "Task.output", + "short" : "Information produced as part of task", + "definition" : "Outputs produced by the Task.", + "requirements" : "Resources and data produced during the execution the task. This data is generated by the business logic of task execution, and is stored separately because it varies between workflows.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Task.output", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "???" + }] + }, + { + "id" : "Task.output.id", + "path" : "Task.output.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Task.output.extension", + "path" : "Task.output.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Task.output.modifierExtension", + "path" : "Task.output.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Task.output.type", + "path" : "Task.output.type", + "short" : "Label for output", + "definition" : "The name of the Output parameter.", + "requirements" : "Outputs are named to enable task automation to bind data and pass it from one task to the next.", + "alias" : ["Name"], + "min" : 1, + "max" : "1", + "base" : { + "path" : "Task.output.type", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "TaskOutputParameterType" + }], + "strength" : "example", + "description" : "Codes to identify types of input parameters. These will typically be specific to a particular workflow. E.g. \"Identified issues\", \"Preliminary results\", \"Filler order\", \"Final results\", etc." + }, + "mapping" : [{ + "identity" : "rim", + "map" : "???" + }] + }, + { + "id" : "Task.output.value[x]", + "path" : "Task.output.value[x]", + "short" : "Result of output", + "definition" : "The value of the Output parameter as a basic type.", + "requirements" : "Task outputs can take any form.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Task.output.value[x]", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "base64Binary" + }, + { + "code" : "boolean" + }, + { + "code" : "canonical" + }, + { + "code" : "code" + }, + { + "code" : "date" + }, + { + "code" : "dateTime" + }, + { + "code" : "decimal" + }, + { + "code" : "id" + }, + { + "code" : "instant" + }, + { + "code" : "integer" + }, + { + "code" : "markdown" + }, + { + "code" : "oid" + }, + { + "code" : "positiveInt" + }, + { + "code" : "string" + }, + { + "code" : "time" + }, + { + "code" : "unsignedInt" + }, + { + "code" : "uri" + }, + { + "code" : "url" + }, + { + "code" : "uuid" + }, + { + "code" : "Address" + }, + { + "code" : "Age" + }, + { + "code" : "Annotation" + }, + { + "code" : "Attachment" + }, + { + "code" : "CodeableConcept" + }, + { + "code" : "Coding" + }, + { + "code" : "ContactPoint" + }, + { + "code" : "Count" + }, + { + "code" : "Distance" + }, + { + "code" : "Duration" + }, + { + "code" : "HumanName" + }, + { + "code" : "Identifier" + }, + { + "code" : "Money" + }, + { + "code" : "Period" + }, + { + "code" : "Quantity" + }, + { + "code" : "Range" + }, + { + "code" : "Ratio" + }, + { + "code" : "Reference" + }, + { + "code" : "SampledData" + }, + { + "code" : "Signature" + }, + { + "code" : "Timing" + }, + { + "code" : "ContactDetail" + }, + { + "code" : "Contributor" + }, + { + "code" : "DataRequirement" + }, + { + "code" : "Expression" + }, + { + "code" : "ParameterDefinition" + }, + { + "code" : "RelatedArtifact" + }, + { + "code" : "TriggerDefinition" + }, + { + "code" : "UsageContext" + }, + { + "code" : "Dosage" + }, + { + "code" : "Meta" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "???" + }] + }] + }, + "differential" : { + "element" : [{ + "id" : "Task", + "path" : "Task" + }, + { + "id" : "Task.focus", + "path" : "Task.focus", + "min" : 1, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Specimen"] + }] + }, + { + "id" : "Task.for", + "path" : "Task.for", + "min" : 1, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Patient"] + }] + }, + { + "id" : "Task.owner", + "path" : "Task.owner", + "min" : 1, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Organization"] + }] + }] + } } \ No newline at end of file diff --git a/StructureDefinition-ncpi-specimen-task.profile.history.html b/StructureDefinition-ncpi-specimen-task.profile.history.html index 4dc396fd..1ea52c7c 100644 --- a/StructureDefinition-ncpi-specimen-task.profile.history.html +++ b/StructureDefinition-ncpi-specimen-task.profile.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -298,7 +298,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Change History</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -356,7 +356,7 @@ <h2 id="root">Resource Profile: SpecimenTask - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-specimen-task.profile.json.html b/StructureDefinition-ncpi-specimen-task.profile.json.html index 120c0644..ac729018 100644 --- a/StructureDefinition-ncpi-specimen-task.profile.json.html +++ b/StructureDefinition-ncpi-specimen-task.profile.json.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: SpecimenTask - JSON Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -342,7 +342,7 @@ <h2 id="root">Resource Profile: SpecimenTask - JSON Profile</h2> "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a>" : "SpecimenTask", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a>" : "Research Task", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a>" : "draft", - "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>" : [ { @@ -3369,7 +3369,7 @@ <h2 id="root">Resource Profile: SpecimenTask - JSON Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-specimen-task.profile.ttl.html b/StructureDefinition-ncpi-specimen-task.profile.ttl.html index df3c8b54..2e0b1e00 100644 --- a/StructureDefinition-ncpi-specimen-task.profile.ttl.html +++ b/StructureDefinition-ncpi-specimen-task.profile.ttl.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: SpecimenTask - TTL Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -329,11 +329,11 @@ <h2 id="root">Resource Profile: SpecimenTask - TTL Profile</h2> a fhir:StructureDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-specimen-task"]; + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-specimen-task"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description &amp; Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-specimen-task-definitions.html#Task\">Task</a><a name=\"Task\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/task.html\">Task</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">A task to be performed</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-specimen-task-definitions.html#Task.focus\">focus</a><a name=\"Task.focus\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/specimen.html\">Specimen</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">What task is acting on</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-specimen-task-definitions.html#Task.for\">for</a><a name=\"Task.for\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/patient.html\">Patient</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Beneficiary of the Task</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-specimen-task-definitions.html#Task.owner\">owner</a><a name=\"Task.owner\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/organization.html\">Organization</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Responsible individual</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -342,14 +342,14 @@ <h2 id="root">Resource Profile: SpecimenTask - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "not-classified" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-specimen-task"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "SpecimenTask"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Research Task"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-specimen-task"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "SpecimenTask"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Research Task"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">fhir:StructureDefinition.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -365,9 +365,9 @@ <h2 id="root">Resource Profile: SpecimenTask - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "A FHIR analysis task that takes at least one specimen as input and produces at least one document."]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "A FHIR analysis task that takes at least one specimen as input and produces at least one document."]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping">fhir:StructureDefinition.mapping</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "workflow" ]; @@ -388,15 +388,15 @@ <h2 id="root">Resource Profile: SpecimenTask - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "v2" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.uri">fhir:StructureDefinition.mapping.uri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/v2" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.name">fhir:StructureDefinition.mapping.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "HL7 v2 Mapping" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Task"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Task"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.baseDefinition">fhir:StructureDefinition.baseDefinition</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/Task"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/Task> - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot">fhir:StructureDefinition.snapshot</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot.element">fhir:StructureDefinition.snapshot.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2832,7 +2832,7 @@ <h2 id="root">Resource Profile: SpecimenTask - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.identity">fhir:ElementDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "rim" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.map">fhir:ElementDefinition.mapping.map</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "???" ] ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential">fhir:StructureDefinition.differential</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential.element">fhir:StructureDefinition.differential.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2871,7 +2871,7 @@ <h2 id="root">Resource Profile: SpecimenTask - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/Organization"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/Organization> ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -2933,7 +2933,7 @@ <h2 id="root">Resource Profile: SpecimenTask - TTL Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-specimen-task.profile.xml.html b/StructureDefinition-ncpi-specimen-task.profile.xml.html index b536aa52..89001820 100644 --- a/StructureDefinition-ncpi-specimen-task.profile.xml.html +++ b/StructureDefinition-ncpi-specimen-task.profile.xml.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: SpecimenTask - XML Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -345,7 +345,7 @@ <h2 id="root">Resource Profile: SpecimenTask - XML Profile</h2> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="SpecimenTask"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Research Task"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> - <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -3099,7 +3099,7 @@ <h2 id="root">Resource Profile: SpecimenTask - XML Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-ncpi-specimen-task.ttl b/StructureDefinition-ncpi-specimen-task.ttl index 70d04f7a..0b489bf3 100644 --- a/StructureDefinition-ncpi-specimen-task.ttl +++ b/StructureDefinition-ncpi-specimen-task.ttl @@ -7,11 +7,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-specimen-task> a fhir:StructureDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "ncpi-specimen-task"]; + fhir:Resource.id [ fhir:value "ncpi-specimen-task"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-specimen-task-definitions.html#Task\">Task</a><a name=\"Task\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/task.html\">Task</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">A task to be performed</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-specimen-task-definitions.html#Task.focus\">focus</a><a name=\"Task.focus\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/specimen.html\">Specimen</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">What task is acting on</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-specimen-task-definitions.html#Task.for\">for</a><a name=\"Task.for\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/patient.html\">Patient</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Beneficiary of the Task</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-ncpi-specimen-task-definitions.html#Task.owner\">owner</a><a name=\"Task.owner\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/organization.html\">Organization</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Responsible individual</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -20,14 +20,14 @@ fhir:index 1; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; fhir:Extension.valueCode [ fhir:value "not-classified" ] - ]; - fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-specimen-task"]; - fhir:StructureDefinition.version [ fhir:value "0.2.0"]; - fhir:StructureDefinition.name [ fhir:value "SpecimenTask"]; - fhir:StructureDefinition.title [ fhir:value "Research Task"]; - fhir:StructureDefinition.status [ fhir:value "draft"]; - fhir:StructureDefinition.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-specimen-task"]; # + fhir:StructureDefinition.version [ fhir:value "0.2.0"]; # + fhir:StructureDefinition.name [ fhir:value "SpecimenTask"]; # + fhir:StructureDefinition.title [ fhir:value "Research Task"]; # + fhir:StructureDefinition.status [ fhir:value "draft"]; # + fhir:StructureDefinition.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:StructureDefinition.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -45,9 +45,9 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:StructureDefinition.description [ fhir:value "A FHIR analysis task that takes at least one specimen as input and produces at least one document."]; - fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; + ]; # + fhir:StructureDefinition.description [ fhir:value "A FHIR analysis task that takes at least one specimen as input and produces at least one document."]; # + fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; # fhir:StructureDefinition.mapping [ fhir:index 0; fhir:StructureDefinition.mapping.identity [ fhir:value "workflow" ]; @@ -68,15 +68,15 @@ fhir:StructureDefinition.mapping.identity [ fhir:value "v2" ]; fhir:StructureDefinition.mapping.uri [ fhir:value "http://hl7.org/v2" ]; fhir:StructureDefinition.mapping.name [ fhir:value "HL7 v2 Mapping" ] - ]; - fhir:StructureDefinition.kind [ fhir:value "resource"]; - fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; - fhir:StructureDefinition.type [ fhir:value "Task"]; + ]; # + fhir:StructureDefinition.kind [ fhir:value "resource"]; # + fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; # + fhir:StructureDefinition.type [ fhir:value "Task"]; # fhir:StructureDefinition.baseDefinition [ fhir:value "http://hl7.org/fhir/StructureDefinition/Task"; fhir:link <http://hl7.org/fhir/StructureDefinition/Task> - ]; - fhir:StructureDefinition.derivation [ fhir:value "constraint"]; + ]; # + fhir:StructureDefinition.derivation [ fhir:value "constraint"]; # fhir:StructureDefinition.snapshot [ fhir:StructureDefinition.snapshot.element [ fhir:index 0; @@ -3103,7 +3103,7 @@ fhir:ElementDefinition.mapping.map [ fhir:value "???" ] ] ] - ]; + ]; # fhir:StructureDefinition.differential [ fhir:StructureDefinition.differential.element [ fhir:index 0; @@ -3152,7 +3152,7 @@ ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/StructureDefinition-ncpi-specimen-task.xlsx b/StructureDefinition-ncpi-specimen-task.xlsx index 5430a83c..13af7688 100644 Binary files a/StructureDefinition-ncpi-specimen-task.xlsx and b/StructureDefinition-ncpi-specimen-task.xlsx differ diff --git a/StructureDefinition-ncpi-specimen-task.xml b/StructureDefinition-ncpi-specimen-task.xml index e6595f2e..23e7acb4 100644 --- a/StructureDefinition-ncpi-specimen-task.xml +++ b/StructureDefinition-ncpi-specimen-task.xml @@ -20,7 +20,7 @@ <name value="SpecimenTask"/> <title value="Research Task"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/StructureDefinition-phenotype-definitions.html b/StructureDefinition-phenotype-definitions.html index 3ac70233..66f6a8dc 100644 --- a/StructureDefinition-phenotype-definitions.html +++ b/StructureDefinition-phenotype-definitions.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -327,7 +327,8 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> </ul> <a name="tabs-diff"> </a> <div id="tabs-diff"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Condition"> </a><span style="color: grey">1.</span> <b>Condition</b><a href="#diff_Condition" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Condition.code"> </a><span style="color: grey">2.</span> <b>Condition.code</b><a href="#diff_Condition.code" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/terminologies.html">Binding</a></td><td>The codes SHALL be taken from <a href="ValueSet-phenotype-codes.html">Phenotype Codes</a><span style='color:DarkGray;text-decoration:line-through'>For example codes, see <a href="http://hl7.org/fhir/R4/valueset-condition-code.html">Condition/Problem/DiagnosisCodes</a></span></td></tr> @@ -336,7 +337,8 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> </div> <a name="tabs-key"> </a> <div id="tabs-key"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="key_Condition"> </a><span style="color: grey">1.</span> <b>Condition</b><a href="#key_Condition" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><span style='color:DarkGray'><p>A clinical condition, problem, diagnosis, or other event, situation, issue, or clinical concept that has risen to a level of concern.</p> </span></td></tr> @@ -407,7 +409,7 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> <tr><td>Definition</td><td><span style='color:DarkGray'><p>Indicates the patient or group who the condition record is associated with.</p> </span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td><span style='color:DarkGray'>1</span>..<span style='color:DarkGray'>1</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>)</td></tr> <tr><td>Requirements</td><td><span style='color:DarkGray'><p>Group is typically used for veterinary or public health use cases.</p> </span></td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td><span style='color:DarkGray'>patient</span></td></tr> @@ -418,7 +420,8 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> </div> <a name="tabs-snap"> </a> <div id="tabs-snap"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Condition"> </a><span style="color: grey">1.</span> <b>Condition</b><a href="#Condition" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>A clinical condition, problem, diagnosis, or other event, situation, issue, or clinical concept that has risen to a level of concern.</p> </td></tr> @@ -464,7 +467,7 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#Narrative">Narrative</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrativehtmlxhtmldisplay</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrative, html, xhtml, display</td></tr> <tr><td>Comments</td><td><p>Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a "text blob" or where text is additionally entered raw or narrated and encoded information is added later.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -474,7 +477,7 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/resource.html">Resource</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resourcesanonymous resourcescontained resources</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resources, anonymous resources, contained resources</td></tr> <tr><td>Comments</td><td><p>This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Condition.extension"> </a><span style="color: grey">8.</span> <b>Condition.extension</b><a href="#Condition.extension" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -482,7 +485,7 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -496,7 +499,7 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -516,7 +519,7 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Condition.clinicalStatus"> </a><span style="color: grey">11.</span> <b>Condition.clinicalStatus</b><a href="#Condition.clinicalStatus" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>The clinical status of the condition.</p> </td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1 This element is affected by the following invariants: con-3con-4con-5</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1 This element is affected by the following invariants: con-3, con-4, con-5</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/terminologies.html">Binding</a></td><td>The codes SHALL be taken from <a href="http://hl7.org/fhir/R4/valueset-condition-clinical.html">ConditionClinicalStatusCodes</a> The clinical status of the condition or diagnosis </td></tr> @@ -529,7 +532,7 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Condition.verificationStatus"> </a><span style="color: grey">12.</span> <b>Condition.verificationStatus</b><a href="#Condition.verificationStatus" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>The verification status to support the clinical status of the condition.</p> </td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1 This element is affected by the following invariants: con-3con-5</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1 This element is affected by the following invariants: con-3, con-5</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/terminologies.html">Binding</a></td><td>The codes SHALL be taken from <a href="http://hl7.org/fhir/R4/valueset-condition-ver-status.html">ConditionVerificationStatus</a> The verification status to support or decline the clinical status of the condition or diagnosis </td></tr> @@ -591,7 +594,7 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Indicates the patient or group who the condition record is associated with.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a>)</td></tr> <tr><td>Requirements</td><td><p>Group is typically used for veterinary or public health use cases.</p> </td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>patient</td></tr> @@ -601,7 +604,7 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The Encounter during which this Condition was created or to which the creation of this record is tightly associated.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html" title="http://hl7.org/fhir/StructureDefinition/Encounter">Encounter</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html" title="http://hl7.org/fhir/StructureDefinition/Encounter">Encounter</a>)</td></tr> <tr><td>Comments</td><td><p>This will typically be the encounter the event occurred within, but some activities may be initiated prior to or after the official completion of an encounter but still be tied to the context of the encounter. This record indicates the encounter this particular record is associated with. In the case of a "new" diagnosis reflecting ongoing/revised information about the condition, this might be distinct from the first encounter in which the underlying condition was first "known".</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -637,14 +640,14 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Individual who recorded the record and takes responsibility for its content.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a><a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a>|<a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a>|<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Condition.asserter"> </a><span style="color: grey">23.</span> <b>Condition.asserter</b><a href="#Condition.asserter" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>Individual who is making the condition statement.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a><a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a>|<a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a>|<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Condition.stage"> </a><span style="color: grey">24.</span> <b>Condition.stage</b><a href="#Condition.stage" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -665,7 +668,7 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -679,7 +682,7 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -698,7 +701,7 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Reference to a formal record of the evidence on which the staging assessment is based.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..* This element is affected by the following invariants: con-1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/clinicalimpression.html" title="http://hl7.org/fhir/StructureDefinition/ClinicalImpression">ClinicalImpression</a><a href="http://hl7.org/fhir/R4/diagnosticreport.html" title="http://hl7.org/fhir/StructureDefinition/DiagnosticReport">DiagnosticReport</a><a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/clinicalimpression.html" title="http://hl7.org/fhir/StructureDefinition/ClinicalImpression">ClinicalImpression</a>|<a href="http://hl7.org/fhir/R4/diagnosticreport.html" title="http://hl7.org/fhir/StructureDefinition/DiagnosticReport">DiagnosticReport</a>|<a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Condition.stage.type"> </a><span style="color: grey">30.</span> <b>Condition.stage.type</b><a href="#Condition.stage.type" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -731,7 +734,7 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -745,7 +748,7 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -764,7 +767,7 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Links to other relevant information, including pathology reports.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..* This element is affected by the following invariants: con-2</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Condition.note"> </a><span style="color: grey">37.</span> <b>Condition.note</b><a href="#Condition.note" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -830,7 +833,7 @@ <h2 id="root">Resource Profile: Phenotype - Detailed Descriptions</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-phenotype-examples.html b/StructureDefinition-phenotype-examples.html index e038bd69..3036db16 100644 --- a/StructureDefinition-phenotype-examples.html +++ b/StructureDefinition-phenotype-examples.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: Phenotype - Examples</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -378,7 +378,7 @@ <h2 id="root">Resource Profile: Phenotype - Examples</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-phenotype-mappings.html b/StructureDefinition-phenotype-mappings.html index 59e4c321..811033e0 100644 --- a/StructureDefinition-phenotype-mappings.html +++ b/StructureDefinition-phenotype-mappings.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: Phenotype - Mappings</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -486,7 +486,7 @@ <h2 id="root">Resource Profile: Phenotype - Mappings</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-phenotype-testing.html b/StructureDefinition-phenotype-testing.html index c4dd0ec3..7242f6be 100644 --- a/StructureDefinition-phenotype-testing.html +++ b/StructureDefinition-phenotype-testing.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: Phenotype - Testing</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -362,7 +362,7 @@ <h2 id="root">Resource Profile: Phenotype - Testing</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-phenotype.html b/StructureDefinition-phenotype.html index 5d10c35d..5ee7a311 100644 --- a/StructureDefinition-phenotype.html +++ b/StructureDefinition-phenotype.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -321,7 +321,7 @@ <h2 id="root">Resource Profile: Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -1058,7 +1058,7 @@ <h5 id="recordeddate-vs-onset">recordedDate vs onset</h5> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-phenotype.json b/StructureDefinition-phenotype.json index c9b2f126..d1fbb782 100644 --- a/StructureDefinition-phenotype.json +++ b/StructureDefinition-phenotype.json @@ -1,2006 +1,1710 @@ -{ - "resourceType": "StructureDefinition", - "id": "phenotype", - "text": { - "status": "extensions", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-phenotype-definitions.html#Condition\">Condition</a><a name=\"Condition\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/condition.html\">Condition</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Detailed information about conditions, problems or diagnoses</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-phenotype-definitions.html#Condition.code\">code</a><a name=\"Condition.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Identification of the condition, problem or diagnosis</span><br/><span style=\"font-weight:bold\">Binding: </span><a href=\"ValueSet-phenotype-codes.html\">Phenotype Codes</a> (<a href=\"http://hl7.org/fhir/R4/terminologies.html#required\" title=\"To be conformant, the concept in this element SHALL be from the specified value set.\">required</a>)</td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - }, - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", - "valueString": "Clinical.Summary" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", - "valueCode": "patient" - } - ], - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/phenotype", - "version": "0.2.0", - "name": "Phenotype", - "title": "NCPI Phenotype", - "status": "draft", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "Representation of phenotypic observations (present or absent)", - "fhirVersion": "4.0.1", - "mapping": [ - { - "identity": "workflow", - "uri": "http://hl7.org/fhir/workflow", - "name": "Workflow Pattern" - }, - { - "identity": "sct-concept", - "uri": "http://snomed.info/conceptdomain", - "name": "SNOMED CT Concept Domain Binding" - }, - { - "identity": "v2", - "uri": "http://hl7.org/v2", - "name": "HL7 v2 Mapping" - }, - { - "identity": "rim", - "uri": "http://hl7.org/v3", - "name": "RIM Mapping" - }, - { - "identity": "w5", - "uri": "http://hl7.org/fhir/fivews", - "name": "FiveWs Pattern Mapping" - }, - { - "identity": "sct-attr", - "uri": "http://snomed.org/attributebinding", - "name": "SNOMED CT Attribute Binding" - } - ], - "kind": "resource", - "abstract": false, - "type": "Condition", - "baseDefinition": "http://hl7.org/fhir/StructureDefinition/Condition", - "derivation": "constraint", - "snapshot": { - "element": [ - { - "id": "Condition", - "path": "Condition", - "short": "Detailed information about conditions, problems or diagnoses", - "definition": "A clinical condition, problem, diagnosis, or other event, situation, issue, or clinical concept that has risen to a level of concern.", - "min": 0, - "max": "*", - "base": { - "path": "Condition", - "min": 0, - "max": "*" - }, - "constraint": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", - "valueBoolean": true - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", - "valueMarkdown": "Most systems will expect a clinicalStatus to be valued for problem-list-items that are managed over time, but might not need a clinicalStatus for point in time encounter-diagnosis." - } - ], - "key": "con-3", - "severity": "warning", - "human": "Condition.clinicalStatus SHALL be present if verificationStatus is not entered-in-error and category is problem-list-item", - "expression": "clinicalStatus.exists() or verificationStatus.coding.where(system='http://terminology.hl7.org/CodeSystem/condition-ver-status' and code = 'entered-in-error').exists() or category.select($this='problem-list-item').empty()", - "xpath": "exists(f:clinicalStatus) or exists(f:verificationStatus/f:coding/f:code/@value='entered-in-error') or not(exists(category[@value='problem-list-item']))", - "source": "http://hl7.org/fhir/StructureDefinition/Condition" - }, - { - "key": "con-4", - "severity": "error", - "human": "If condition is abated, then clinicalStatus must be either inactive, resolved, or remission", - "expression": "abatement.empty() or clinicalStatus.coding.where(system='http://terminology.hl7.org/CodeSystem/condition-clinical' and (code='resolved' or code='remission' or code='inactive')).exists()", - "xpath": "not(exists(*[starts-with(local-name(.), 'abatement')])) or exists(f:clinicalStatus/f:coding[f:system/@value='http://terminology.hl7.org/CodeSystem/condition-clinical' and f:code/@value=('resolved', 'remission', 'inactive')])", - "source": "http://hl7.org/fhir/StructureDefinition/Condition" - }, - { - "key": "con-5", - "severity": "error", - "human": "Condition.clinicalStatus SHALL NOT be present if verification Status is entered-in-error", - "expression": "verificationStatus.coding.where(system='http://terminology.hl7.org/CodeSystem/condition-ver-status' and code='entered-in-error').empty() or clinicalStatus.empty()", - "xpath": "not(exists(f:verificationStatus/f:coding[f:system/@value='http://terminology.hl7.org/CodeSystem/condition-ver-status' and f:code/@value='entered-in-error'])) or not(exists(f:clinicalStatus))", - "source": "http://hl7.org/fhir/StructureDefinition/Condition" - }, - { - "key": "dom-2", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL NOT contain nested Resources", - "expression": "contained.contained.empty()", - "xpath": "not(parent::f:contained and f:contained)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-3", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", - "expression": "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", - "xpath": "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-4", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", - "expression": "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-5", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a security label", - "expression": "contained.meta.security.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:security))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", - "valueBoolean": true - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", - "valueMarkdown": "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." - } - ], - "key": "dom-6", - "severity": "warning", - "human": "A resource should have narrative for robust management", - "expression": "text.`div`.exists()", - "xpath": "exists(f:text/h:div)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Entity. Role, or Act" - }, - { - "identity": "workflow", - "map": "Event" - }, - { - "identity": "sct-concept", - "map": "< 243796009 |Situation with explicit context| : 246090004 |Associated finding| = ( ( < 404684003 |Clinical finding| MINUS ( << 420134006 |Propensity to adverse reactions| OR << 473010000 |Hypersensitivity condition| OR << 79899007 |Drug interaction| OR << 69449002 |Drug action| OR << 441742003 |Evaluation finding| OR << 307824009 |Administrative status| OR << 385356007 |Tumor stage finding|)) OR < 272379006 |Event|)" - }, - { - "identity": "v2", - "map": "PPR message" - }, - { - "identity": "rim", - "map": "Observation[classCode=OBS, moodCode=EVN, code=ASSERTION, value<Diagnosis]" - } - ] - }, - { - "id": "Condition.id", - "path": "Condition.id", - "short": "Logical id of this artifact", - "definition": "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", - "comment": "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "id" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "Condition.meta", - "path": "Condition.meta", - "short": "Metadata about the resource", - "definition": "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.meta", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Meta" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "Condition.implicitRules", - "path": "Condition.implicitRules", - "short": "A set of rules under which this content was created", - "definition": "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", - "comment": "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.implicitRules", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", - "isSummary": true - }, - { - "id": "Condition.language", - "path": "Condition.language", - "short": "Language of the resource content", - "definition": "The base language in which the resource is written.", - "comment": "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", - "min": 0, - "max": "1", - "base": { - "path": "Resource.language", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", - "valueCanonical": "http://hl7.org/fhir/ValueSet/all-languages" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "Language" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "preferred", - "description": "A human language.", - "valueSet": "http://hl7.org/fhir/ValueSet/languages" - } - }, - { - "id": "Condition.text", - "path": "Condition.text", - "short": "Text summary of the resource, for human interpretation", - "definition": "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", - "comment": "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", - "alias": [ - "narrative", - "html", - "xhtml", - "display" - ], - "min": 0, - "max": "1", - "base": { - "path": "DomainResource.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Narrative" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Act.text?" - } - ] - }, - { - "id": "Condition.contained", - "path": "Condition.contained", - "short": "Contained, inline Resources", - "definition": "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", - "comment": "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", - "alias": [ - "inline resources", - "anonymous resources", - "contained resources" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.contained", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Resource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Condition.extension", - "path": "Condition.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Condition.modifierExtension", - "path": "Condition.modifierExtension", - "short": "Extensions that cannot be ignored", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Condition.identifier", - "path": "Condition.identifier", - "short": "External Ids for this condition", - "definition": "Business identifiers assigned to this condition by the performer or other systems which remain constant as the resource is updated and propagates from server to server.", - "comment": "This is a business identifier, not a resource identifier (see [discussion](http://hl7.org/fhir/R4/resource.html#identifiers)). It is best practice for the identifier to only appear on a single resource instance, however business practices may occasionally dictate that multiple resource instances with the same identifier can exist - possibly even with different resource types. For example, multiple Patient and a Person resource instance might share the same social insurance number.", - "requirements": "Allows identification of the condition as it is known by various participating systems and in a way that remains consistent across servers.", - "min": 0, - "max": "*", - "base": { - "path": "Condition.identifier", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Identifier" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.identifier" - }, - { - "identity": "w5", - "map": "FiveWs.identifier" - }, - { - "identity": "rim", - "map": ".id" - } - ] - }, - { - "id": "Condition.clinicalStatus", - "path": "Condition.clinicalStatus", - "short": "active | recurrence | relapse | inactive | remission | resolved", - "definition": "The clinical status of the condition.", - "comment": "The data type is CodeableConcept because clinicalStatus has some clinical judgment involved, such that there might need to be more specificity than the required FHIR value set allows. For example, a SNOMED coding might allow for additional specificity.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.clinicalStatus", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "con-3", - "con-4", - "con-5" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because the status contains codes that mark the condition as no longer active.", - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ConditionClinicalStatus" - } - ], - "strength": "required", - "description": "The clinical status of the condition or diagnosis.", - "valueSet": "http://hl7.org/fhir/ValueSet/condition-clinical|4.0.1" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.status" - }, - { - "identity": "w5", - "map": "FiveWs.status" - }, - { - "identity": "sct-concept", - "map": "< 303105007 |Disease phases|" - }, - { - "identity": "v2", - "map": "PRB-14" - }, - { - "identity": "rim", - "map": "Observation ACT\n.inboundRelationship[typeCode=COMP].source[classCode=OBS, code=\"clinicalStatus\", moodCode=EVN].value" - } - ] - }, - { - "id": "Condition.verificationStatus", - "path": "Condition.verificationStatus", - "short": "unconfirmed | provisional | differential | confirmed | refuted | entered-in-error", - "definition": "The verification status to support the clinical status of the condition.", - "comment": "verificationStatus is not required. For example, when a patient has abdominal pain in the ED, there is not likely going to be a verification status.\nThe data type is CodeableConcept because verificationStatus has some clinical judgment involved, such that there might need to be more specificity than the required FHIR value set allows. For example, a SNOMED coding might allow for additional specificity.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.verificationStatus", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "con-3", - "con-5" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because the status contains the code refuted and entered-in-error that mark the Condition as not currently valid.", - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ConditionVerificationStatus" - } - ], - "strength": "required", - "description": "The verification status to support or decline the clinical status of the condition or diagnosis.", - "valueSet": "http://hl7.org/fhir/ValueSet/condition-ver-status|4.0.1" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.status" - }, - { - "identity": "w5", - "map": "FiveWs.status" - }, - { - "identity": "sct-concept", - "map": "< 410514004 |Finding context value|" - }, - { - "identity": "v2", - "map": "PRB-13" - }, - { - "identity": "rim", - "map": "Observation ACT\n.inboundRelationship[typeCode=COMP].source[classCode=OBS, code=\"verificationStatus\", moodCode=EVN].value" - }, - { - "identity": "sct-attr", - "map": "408729009" - } - ] - }, - { - "id": "Condition.category", - "path": "Condition.category", - "short": "problem-list-item | encounter-diagnosis", - "definition": "A category assigned to the condition.", - "comment": "The categorization is often highly contextual and may appear poorly differentiated or not very useful in other contexts.", - "min": 0, - "max": "*", - "base": { - "path": "Condition.category", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ConditionCategory" - } - ], - "strength": "extensible", - "description": "A category assigned to the condition.", - "valueSet": "http://hl7.org/fhir/ValueSet/condition-category" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.class" - }, - { - "identity": "sct-concept", - "map": "< 404684003 |Clinical finding|" - }, - { - "identity": "v2", - "map": "'problem' if from PRB-3. 'diagnosis' if from DG1 segment in PV1 message" - }, - { - "identity": "rim", - "map": ".code" - } - ] - }, - { - "id": "Condition.severity", - "path": "Condition.severity", - "short": "Subjective severity of condition", - "definition": "A subjective assessment of the severity of the condition as evaluated by the clinician.", - "comment": "Coding of the severity with a terminology is preferred, where possible.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.severity", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ConditionSeverity" - } - ], - "strength": "preferred", - "description": "A subjective assessment of the severity of the condition as evaluated by the clinician.", - "valueSet": "http://hl7.org/fhir/ValueSet/condition-severity" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.grade" - }, - { - "identity": "sct-concept", - "map": "< 272141005 |Severities|" - }, - { - "identity": "v2", - "map": "PRB-26 / ABS-3" - }, - { - "identity": "rim", - "map": "Can be pre/post-coordinated into value. Or ./inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"severity\"].value" - }, - { - "identity": "sct-attr", - "map": "246112005" - } - ] - }, - { - "id": "Condition.code", - "path": "Condition.code", - "short": "Identification of the condition, problem or diagnosis", - "definition": "Identification of the condition, problem or diagnosis.", - "requirements": "0..1 to account for primarily narrative only resources.", - "alias": [ - "type" - ], - "min": 0, - "max": "1", - "base": { - "path": "Condition.code", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "strength": "required", - "valueSet": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/phenotype-codes" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.code" - }, - { - "identity": "w5", - "map": "FiveWs.what[x]" - }, - { - "identity": "sct-concept", - "map": "code 246090004 |Associated finding| (< 404684003 |Clinical finding| MINUS\n<< 420134006 |Propensity to adverse reactions| MINUS \n<< 473010000 |Hypersensitivity condition| MINUS \n<< 79899007 |Drug interaction| MINUS\n<< 69449002 |Drug action| MINUS \n<< 441742003 |Evaluation finding| MINUS \n<< 307824009 |Administrative status| MINUS \n<< 385356007 |Tumor stage finding|) \nOR < 413350009 |Finding with explicit context|\nOR < 272379006 |Event|" - }, - { - "identity": "v2", - "map": "PRB-3" - }, - { - "identity": "rim", - "map": ".value" - }, - { - "identity": "sct-attr", - "map": "246090004" - } - ] - }, - { - "id": "Condition.bodySite", - "path": "Condition.bodySite", - "short": "Anatomical location, if relevant", - "definition": "The anatomical location where this condition manifests itself.", - "comment": "Only used if not implicit in code found in Condition.code. If the use case requires attributes from the BodySite resource (e.g. to identify and track separately) then use the standard extension [bodySite](http://hl7.org/fhir/R4/extension-bodysite.html). May be a summary code, or a reference to a very precise definition of the location, or both.", - "min": 0, - "max": "*", - "base": { - "path": "Condition.bodySite", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "BodySite" - } - ], - "strength": "example", - "description": "Codes describing anatomical locations. May include laterality.", - "valueSet": "http://hl7.org/fhir/ValueSet/body-site" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 442083009 |Anatomical or acquired body structure|" - }, - { - "identity": "rim", - "map": ".targetBodySiteCode" - }, - { - "identity": "sct-attr", - "map": "363698007" - } - ] - }, - { - "id": "Condition.subject", - "path": "Condition.subject", - "short": "Who has the condition?", - "definition": "Indicates the patient or group who the condition record is associated with.", - "requirements": "Group is typically used for veterinary or public health use cases.", - "alias": [ - "patient" - ], - "min": 1, - "max": "1", - "base": { - "path": "Condition.subject", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Patient", - "http://hl7.org/fhir/StructureDefinition/Group" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.subject" - }, - { - "identity": "w5", - "map": "FiveWs.subject[x]" - }, - { - "identity": "v2", - "map": "PID-3" - }, - { - "identity": "rim", - "map": ".participation[typeCode=SBJ].role[classCode=PAT]" - }, - { - "identity": "w5", - "map": "FiveWs.subject" - } - ] - }, - { - "id": "Condition.encounter", - "path": "Condition.encounter", - "short": "Encounter created as part of", - "definition": "The Encounter during which this Condition was created or to which the creation of this record is tightly associated.", - "comment": "This will typically be the encounter the event occurred within, but some activities may be initiated prior to or after the official completion of an encounter but still be tied to the context of the encounter. This record indicates the encounter this particular record is associated with. In the case of a \"new\" diagnosis reflecting ongoing/revised information about the condition, this might be distinct from the first encounter in which the underlying condition was first \"known\".", - "min": 0, - "max": "1", - "base": { - "path": "Condition.encounter", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Encounter" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.context" - }, - { - "identity": "w5", - "map": "FiveWs.context" - }, - { - "identity": "v2", - "map": "PV1-19 (+PV1-54)" - }, - { - "identity": "rim", - "map": ".inboundRelationship[typeCode=COMP].source[classCode=ENC, moodCode=EVN]" - } - ] - }, - { - "id": "Condition.onset[x]", - "path": "Condition.onset[x]", - "short": "Estimated or actual date, date-time, or age", - "definition": "Estimated or actual date or date-time the condition began, in the opinion of the clinician.", - "comment": "Age is generally used when the patient reports an age at which the Condition began to occur.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.onset[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "dateTime" - }, - { - "code": "Age" - }, - { - "code": "Period" - }, - { - "code": "Range" - }, - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.occurrence[x]" - }, - { - "identity": "w5", - "map": "FiveWs.init" - }, - { - "identity": "v2", - "map": "PRB-16" - }, - { - "identity": "rim", - "map": ".effectiveTime.low or .inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"age at onset\"].value" - } - ] - }, - { - "id": "Condition.abatement[x]", - "path": "Condition.abatement[x]", - "short": "When in resolution/remission", - "definition": "The date or estimated date that the condition resolved or went into remission. This is called \"abatement\" because of the many overloaded connotations associated with \"remission\" or \"resolution\" - Conditions are never really resolved, but they can abate.", - "comment": "There is no explicit distinction between resolution and remission because in many cases the distinction is not clear. Age is generally used when the patient reports an age at which the Condition abated. If there is no abatement element, it is unknown whether the condition has resolved or entered remission; applications and users should generally assume that the condition is still valid. When abatementString exists, it implies the condition is abated.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.abatement[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "dateTime" - }, - { - "code": "Age" - }, - { - "code": "Period" - }, - { - "code": "Range" - }, - { - "code": "string" - } - ], - "condition": [ - "con-4" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.done[x]" - }, - { - "identity": "rim", - "map": ".effectiveTime.high or .inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"age at remission\"].value or .inboundRelationship[typeCode=SUBJ]source[classCode=CONC, moodCode=EVN].status=completed" - } - ] - }, - { - "id": "Condition.recordedDate", - "path": "Condition.recordedDate", - "short": "Date record was first recorded", - "definition": "The recordedDate represents when this particular Condition record was created in the system, which is often a system-generated date.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.recordedDate", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "dateTime" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.recorded" - }, - { - "identity": "v2", - "map": "REL-11" - }, - { - "identity": "rim", - "map": ".participation[typeCode=AUT].time" - } - ] - }, - { - "id": "Condition.recorder", - "path": "Condition.recorder", - "short": "Who recorded the condition", - "definition": "Individual who recorded the record and takes responsibility for its content.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.recorder", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Practitioner", - "http://hl7.org/fhir/StructureDefinition/PractitionerRole", - "http://hl7.org/fhir/StructureDefinition/Patient", - "http://hl7.org/fhir/StructureDefinition/RelatedPerson" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.author" - }, - { - "identity": "rim", - "map": ".participation[typeCode=AUT].role" - } - ] - }, - { - "id": "Condition.asserter", - "path": "Condition.asserter", - "short": "Person who asserts this condition", - "definition": "Individual who is making the condition statement.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.asserter", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Practitioner", - "http://hl7.org/fhir/StructureDefinition/PractitionerRole", - "http://hl7.org/fhir/StructureDefinition/Patient", - "http://hl7.org/fhir/StructureDefinition/RelatedPerson" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.source" - }, - { - "identity": "v2", - "map": "REL-7.1 identifier + REL-7.12 type code" - }, - { - "identity": "rim", - "map": ".participation[typeCode=INF].role" - } - ] - }, - { - "id": "Condition.stage", - "path": "Condition.stage", - "short": "Stage/grade, usually assessed formally", - "definition": "Clinical stage or grade of a condition. May include formal severity assessments.", - "min": 0, - "max": "*", - "base": { - "path": "Condition.stage", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "con-1", - "severity": "error", - "human": "Stage SHALL have summary or assessment", - "expression": "summary.exists() or assessment.exists()", - "xpath": "exists(f:summary) or exists(f:assessment)", - "source": "http://hl7.org/fhir/StructureDefinition/Condition" - }, - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "./inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"stage/grade\"]" - } - ] - }, - { - "id": "Condition.stage.id", - "path": "Condition.stage.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Condition.stage.extension", - "path": "Condition.stage.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Condition.stage.modifierExtension", - "path": "Condition.stage.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Condition.stage.summary", - "path": "Condition.stage.summary", - "short": "Simple summary (disease specific)", - "definition": "A simple summary of the stage such as \"Stage 3\". The determination of the stage is disease-specific.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.stage.summary", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "con-1" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ConditionStage" - } - ], - "strength": "example", - "description": "Codes describing condition stages (e.g. Cancer stages).", - "valueSet": "http://hl7.org/fhir/ValueSet/condition-stage" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 254291000 |Staging and scales|" - }, - { - "identity": "v2", - "map": "PRB-14" - }, - { - "identity": "rim", - "map": ".value" - } - ] - }, - { - "id": "Condition.stage.assessment", - "path": "Condition.stage.assessment", - "short": "Formal record of assessment", - "definition": "Reference to a formal record of the evidence on which the staging assessment is based.", - "min": 0, - "max": "*", - "base": { - "path": "Condition.stage.assessment", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/ClinicalImpression", - "http://hl7.org/fhir/StructureDefinition/DiagnosticReport", - "http://hl7.org/fhir/StructureDefinition/Observation" - ] - } - ], - "condition": [ - "con-1" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": ".self" - } - ] - }, - { - "id": "Condition.stage.type", - "path": "Condition.stage.type", - "short": "Kind of staging", - "definition": "The kind of staging, such as pathological or clinical staging.", - "min": 0, - "max": "1", - "base": { - "path": "Condition.stage.type", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ConditionStageType" - } - ], - "strength": "example", - "description": "Codes describing the kind of condition staging (e.g. clinical or pathological).", - "valueSet": "http://hl7.org/fhir/ValueSet/condition-stage-type" - }, - "mapping": [ - { - "identity": "rim", - "map": "./inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"stage type\"]" - } - ] - }, - { - "id": "Condition.evidence", - "path": "Condition.evidence", - "short": "Supporting evidence", - "definition": "Supporting evidence / manifestations that are the basis of the Condition's verification status, such as evidence that confirmed or refuted the condition.", - "comment": "The evidence may be a simple list of coded symptoms/manifestations, or references to observations or formal assessments, or both.", - "min": 0, - "max": "*", - "base": { - "path": "Condition.evidence", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "con-2", - "severity": "error", - "human": "evidence SHALL have code or details", - "expression": "code.exists() or detail.exists()", - "xpath": "exists(f:code) or exists(f:detail)", - "source": "http://hl7.org/fhir/StructureDefinition/Condition" - }, - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=SPRT].target[classCode=OBS, moodCode=EVN]" - } - ] - }, - { - "id": "Condition.evidence.id", - "path": "Condition.evidence.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Condition.evidence.extension", - "path": "Condition.evidence.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Condition.evidence.modifierExtension", - "path": "Condition.evidence.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Condition.evidence.code", - "path": "Condition.evidence.code", - "short": "Manifestation/symptom", - "definition": "A manifestation or symptom that led to the recording of this condition.", - "min": 0, - "max": "*", - "base": { - "path": "Condition.evidence.code", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "con-2" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ManifestationOrSymptom" - } - ], - "strength": "example", - "description": "Codes that describe the manifestation or symptoms of a condition.", - "valueSet": "http://hl7.org/fhir/ValueSet/manifestation-or-symptom" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.reasonCode" - }, - { - "identity": "w5", - "map": "FiveWs.why[x]" - }, - { - "identity": "sct-concept", - "map": "< 404684003 |Clinical finding|" - }, - { - "identity": "rim", - "map": "[code=\"diagnosis\"].value" - } - ] - }, - { - "id": "Condition.evidence.detail", - "path": "Condition.evidence.detail", - "short": "Supporting information found elsewhere", - "definition": "Links to other relevant information, including pathology reports.", - "min": 0, - "max": "*", - "base": { - "path": "Condition.evidence.detail", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Resource" - ] - } - ], - "condition": [ - "con-2" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.why[x]" - }, - { - "identity": "rim", - "map": ".self" - } - ] - }, - { - "id": "Condition.note", - "path": "Condition.note", - "short": "Additional information about the Condition", - "definition": "Additional information about the Condition. This is a general notes/comments entry for description of the Condition, its diagnosis and prognosis.", - "min": 0, - "max": "*", - "base": { - "path": "Condition.note", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Annotation" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Event.note" - }, - { - "identity": "v2", - "map": "NTE child of PRB" - }, - { - "identity": "rim", - "map": ".inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"annotation\"].value" - } - ] - } - ] - }, - "differential": { - "element": [ - { - "id": "Condition", - "path": "Condition" - }, - { - "id": "Condition.code", - "path": "Condition.code", - "binding": { - "strength": "required", - "valueSet": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/phenotype-codes" - } - } - ] - } +{ + "resourceType" : "StructureDefinition", + "id" : "phenotype", + "text" : { + "status" : "extensions", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-phenotype-definitions.html#Condition\">Condition</a><a name=\"Condition\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/condition.html\">Condition</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Detailed information about conditions, problems or diagnoses</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-phenotype-definitions.html#Condition.code\">code</a><a name=\"Condition.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Identification of the condition, problem or diagnosis</span><br/><span style=\"font-weight:bold\">Binding: </span><a href=\"ValueSet-phenotype-codes.html\">Phenotype Codes</a> (<a href=\"http://hl7.org/fhir/R4/terminologies.html#required\" title=\"To be conformant, the concept in this element SHALL be from the specified value set.\">required</a>)</td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" + }, + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", + "valueString" : "Clinical.Summary" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", + "valueCode" : "patient" + }], + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/phenotype", + "version" : "0.2.0", + "name" : "Phenotype", + "title" : "NCPI Phenotype", + "status" : "draft", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "Representation of phenotypic observations (present or absent)", + "fhirVersion" : "4.0.1", + "mapping" : [{ + "identity" : "workflow", + "uri" : "http://hl7.org/fhir/workflow", + "name" : "Workflow Pattern" + }, + { + "identity" : "sct-concept", + "uri" : "http://snomed.info/conceptdomain", + "name" : "SNOMED CT Concept Domain Binding" + }, + { + "identity" : "v2", + "uri" : "http://hl7.org/v2", + "name" : "HL7 v2 Mapping" + }, + { + "identity" : "rim", + "uri" : "http://hl7.org/v3", + "name" : "RIM Mapping" + }, + { + "identity" : "w5", + "uri" : "http://hl7.org/fhir/fivews", + "name" : "FiveWs Pattern Mapping" + }, + { + "identity" : "sct-attr", + "uri" : "http://snomed.org/attributebinding", + "name" : "SNOMED CT Attribute Binding" + }], + "kind" : "resource", + "abstract" : false, + "type" : "Condition", + "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/Condition", + "derivation" : "constraint", + "snapshot" : { + "element" : [{ + "id" : "Condition", + "path" : "Condition", + "short" : "Detailed information about conditions, problems or diagnoses", + "definition" : "A clinical condition, problem, diagnosis, or other event, situation, issue, or clinical concept that has risen to a level of concern.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition", + "min" : 0, + "max" : "*" + }, + "constraint" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", + "valueBoolean" : true + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", + "valueMarkdown" : "Most systems will expect a clinicalStatus to be valued for problem-list-items that are managed over time, but might not need a clinicalStatus for point in time encounter-diagnosis." + }], + "key" : "con-3", + "severity" : "warning", + "human" : "Condition.clinicalStatus SHALL be present if verificationStatus is not entered-in-error and category is problem-list-item", + "expression" : "clinicalStatus.exists() or verificationStatus.coding.where(system='http://terminology.hl7.org/CodeSystem/condition-ver-status' and code = 'entered-in-error').exists() or category.select($this='problem-list-item').empty()", + "xpath" : "exists(f:clinicalStatus) or exists(f:verificationStatus/f:coding/f:code/@value='entered-in-error') or not(exists(category[@value='problem-list-item']))", + "source" : "http://hl7.org/fhir/StructureDefinition/Condition" + }, + { + "key" : "con-4", + "severity" : "error", + "human" : "If condition is abated, then clinicalStatus must be either inactive, resolved, or remission", + "expression" : "abatement.empty() or clinicalStatus.coding.where(system='http://terminology.hl7.org/CodeSystem/condition-clinical' and (code='resolved' or code='remission' or code='inactive')).exists()", + "xpath" : "not(exists(*[starts-with(local-name(.), 'abatement')])) or exists(f:clinicalStatus/f:coding[f:system/@value='http://terminology.hl7.org/CodeSystem/condition-clinical' and f:code/@value=('resolved', 'remission', 'inactive')])", + "source" : "http://hl7.org/fhir/StructureDefinition/Condition" + }, + { + "key" : "con-5", + "severity" : "error", + "human" : "Condition.clinicalStatus SHALL NOT be present if verification Status is entered-in-error", + "expression" : "verificationStatus.coding.where(system='http://terminology.hl7.org/CodeSystem/condition-ver-status' and code='entered-in-error').empty() or clinicalStatus.empty()", + "xpath" : "not(exists(f:verificationStatus/f:coding[f:system/@value='http://terminology.hl7.org/CodeSystem/condition-ver-status' and f:code/@value='entered-in-error'])) or not(exists(f:clinicalStatus))", + "source" : "http://hl7.org/fhir/StructureDefinition/Condition" + }, + { + "key" : "dom-2", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL NOT contain nested Resources", + "expression" : "contained.contained.empty()", + "xpath" : "not(parent::f:contained and f:contained)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-3", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", + "expression" : "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", + "xpath" : "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-4", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", + "expression" : "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-5", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a security label", + "expression" : "contained.meta.security.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:security))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", + "valueBoolean" : true + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", + "valueMarkdown" : "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." + }], + "key" : "dom-6", + "severity" : "warning", + "human" : "A resource should have narrative for robust management", + "expression" : "text.`div`.exists()", + "xpath" : "exists(f:text/h:div)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Entity. Role, or Act" + }, + { + "identity" : "workflow", + "map" : "Event" + }, + { + "identity" : "sct-concept", + "map" : "< 243796009 |Situation with explicit context| : 246090004 |Associated finding| = ( ( < 404684003 |Clinical finding| MINUS ( << 420134006 |Propensity to adverse reactions| OR << 473010000 |Hypersensitivity condition| OR << 79899007 |Drug interaction| OR << 69449002 |Drug action| OR << 441742003 |Evaluation finding| OR << 307824009 |Administrative status| OR << 385356007 |Tumor stage finding|)) OR < 272379006 |Event|)" + }, + { + "identity" : "v2", + "map" : "PPR message" + }, + { + "identity" : "rim", + "map" : "Observation[classCode=OBS, moodCode=EVN, code=ASSERTION, value<Diagnosis]" + }] + }, + { + "id" : "Condition.id", + "path" : "Condition.id", + "short" : "Logical id of this artifact", + "definition" : "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", + "comment" : "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "id" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "Condition.meta", + "path" : "Condition.meta", + "short" : "Metadata about the resource", + "definition" : "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.meta", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Meta" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "Condition.implicitRules", + "path" : "Condition.implicitRules", + "short" : "A set of rules under which this content was created", + "definition" : "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", + "comment" : "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.implicitRules", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", + "isSummary" : true + }, + { + "id" : "Condition.language", + "path" : "Condition.language", + "short" : "Language of the resource content", + "definition" : "The base language in which the resource is written.", + "comment" : "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.language", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", + "valueCanonical" : "http://hl7.org/fhir/ValueSet/all-languages" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "Language" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "preferred", + "description" : "A human language.", + "valueSet" : "http://hl7.org/fhir/ValueSet/languages" + } + }, + { + "id" : "Condition.text", + "path" : "Condition.text", + "short" : "Text summary of the resource, for human interpretation", + "definition" : "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", + "comment" : "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", + "alias" : ["narrative", + "html", + "xhtml", + "display"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "DomainResource.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Narrative" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Act.text?" + }] + }, + { + "id" : "Condition.contained", + "path" : "Condition.contained", + "short" : "Contained, inline Resources", + "definition" : "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", + "comment" : "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", + "alias" : ["inline resources", + "anonymous resources", + "contained resources"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.contained", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Resource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Condition.extension", + "path" : "Condition.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Condition.modifierExtension", + "path" : "Condition.modifierExtension", + "short" : "Extensions that cannot be ignored", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Condition.identifier", + "path" : "Condition.identifier", + "short" : "External Ids for this condition", + "definition" : "Business identifiers assigned to this condition by the performer or other systems which remain constant as the resource is updated and propagates from server to server.", + "comment" : "This is a business identifier, not a resource identifier (see [discussion](http://hl7.org/fhir/R4/resource.html#identifiers)). It is best practice for the identifier to only appear on a single resource instance, however business practices may occasionally dictate that multiple resource instances with the same identifier can exist - possibly even with different resource types. For example, multiple Patient and a Person resource instance might share the same social insurance number.", + "requirements" : "Allows identification of the condition as it is known by various participating systems and in a way that remains consistent across servers.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition.identifier", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Identifier" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.identifier" + }, + { + "identity" : "w5", + "map" : "FiveWs.identifier" + }, + { + "identity" : "rim", + "map" : ".id" + }] + }, + { + "id" : "Condition.clinicalStatus", + "path" : "Condition.clinicalStatus", + "short" : "active | recurrence | relapse | inactive | remission | resolved", + "definition" : "The clinical status of the condition.", + "comment" : "The data type is CodeableConcept because clinicalStatus has some clinical judgment involved, such that there might need to be more specificity than the required FHIR value set allows. For example, a SNOMED coding might allow for additional specificity.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.clinicalStatus", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["con-3", + "con-4", + "con-5"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because the status contains codes that mark the condition as no longer active.", + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ConditionClinicalStatus" + }], + "strength" : "required", + "description" : "The clinical status of the condition or diagnosis.", + "valueSet" : "http://hl7.org/fhir/ValueSet/condition-clinical|4.0.1" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.status" + }, + { + "identity" : "w5", + "map" : "FiveWs.status" + }, + { + "identity" : "sct-concept", + "map" : "< 303105007 |Disease phases|" + }, + { + "identity" : "v2", + "map" : "PRB-14" + }, + { + "identity" : "rim", + "map" : "Observation ACT\n.inboundRelationship[typeCode=COMP].source[classCode=OBS, code=\"clinicalStatus\", moodCode=EVN].value" + }] + }, + { + "id" : "Condition.verificationStatus", + "path" : "Condition.verificationStatus", + "short" : "unconfirmed | provisional | differential | confirmed | refuted | entered-in-error", + "definition" : "The verification status to support the clinical status of the condition.", + "comment" : "verificationStatus is not required. For example, when a patient has abdominal pain in the ED, there is not likely going to be a verification status.\nThe data type is CodeableConcept because verificationStatus has some clinical judgment involved, such that there might need to be more specificity than the required FHIR value set allows. For example, a SNOMED coding might allow for additional specificity.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.verificationStatus", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["con-3", + "con-5"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because the status contains the code refuted and entered-in-error that mark the Condition as not currently valid.", + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ConditionVerificationStatus" + }], + "strength" : "required", + "description" : "The verification status to support or decline the clinical status of the condition or diagnosis.", + "valueSet" : "http://hl7.org/fhir/ValueSet/condition-ver-status|4.0.1" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.status" + }, + { + "identity" : "w5", + "map" : "FiveWs.status" + }, + { + "identity" : "sct-concept", + "map" : "< 410514004 |Finding context value|" + }, + { + "identity" : "v2", + "map" : "PRB-13" + }, + { + "identity" : "rim", + "map" : "Observation ACT\n.inboundRelationship[typeCode=COMP].source[classCode=OBS, code=\"verificationStatus\", moodCode=EVN].value" + }, + { + "identity" : "sct-attr", + "map" : "408729009" + }] + }, + { + "id" : "Condition.category", + "path" : "Condition.category", + "short" : "problem-list-item | encounter-diagnosis", + "definition" : "A category assigned to the condition.", + "comment" : "The categorization is often highly contextual and may appear poorly differentiated or not very useful in other contexts.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition.category", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ConditionCategory" + }], + "strength" : "extensible", + "description" : "A category assigned to the condition.", + "valueSet" : "http://hl7.org/fhir/ValueSet/condition-category" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.class" + }, + { + "identity" : "sct-concept", + "map" : "< 404684003 |Clinical finding|" + }, + { + "identity" : "v2", + "map" : "'problem' if from PRB-3. 'diagnosis' if from DG1 segment in PV1 message" + }, + { + "identity" : "rim", + "map" : ".code" + }] + }, + { + "id" : "Condition.severity", + "path" : "Condition.severity", + "short" : "Subjective severity of condition", + "definition" : "A subjective assessment of the severity of the condition as evaluated by the clinician.", + "comment" : "Coding of the severity with a terminology is preferred, where possible.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.severity", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ConditionSeverity" + }], + "strength" : "preferred", + "description" : "A subjective assessment of the severity of the condition as evaluated by the clinician.", + "valueSet" : "http://hl7.org/fhir/ValueSet/condition-severity" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.grade" + }, + { + "identity" : "sct-concept", + "map" : "< 272141005 |Severities|" + }, + { + "identity" : "v2", + "map" : "PRB-26 / ABS-3" + }, + { + "identity" : "rim", + "map" : "Can be pre/post-coordinated into value. Or ./inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"severity\"].value" + }, + { + "identity" : "sct-attr", + "map" : "246112005" + }] + }, + { + "id" : "Condition.code", + "path" : "Condition.code", + "short" : "Identification of the condition, problem or diagnosis", + "definition" : "Identification of the condition, problem or diagnosis.", + "requirements" : "0..1 to account for primarily narrative only resources.", + "alias" : ["type"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.code", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "strength" : "required", + "valueSet" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/phenotype-codes" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.code" + }, + { + "identity" : "w5", + "map" : "FiveWs.what[x]" + }, + { + "identity" : "sct-concept", + "map" : "code 246090004 |Associated finding| (< 404684003 |Clinical finding| MINUS\n<< 420134006 |Propensity to adverse reactions| MINUS \n<< 473010000 |Hypersensitivity condition| MINUS \n<< 79899007 |Drug interaction| MINUS\n<< 69449002 |Drug action| MINUS \n<< 441742003 |Evaluation finding| MINUS \n<< 307824009 |Administrative status| MINUS \n<< 385356007 |Tumor stage finding|) \nOR < 413350009 |Finding with explicit context|\nOR < 272379006 |Event|" + }, + { + "identity" : "v2", + "map" : "PRB-3" + }, + { + "identity" : "rim", + "map" : ".value" + }, + { + "identity" : "sct-attr", + "map" : "246090004" + }] + }, + { + "id" : "Condition.bodySite", + "path" : "Condition.bodySite", + "short" : "Anatomical location, if relevant", + "definition" : "The anatomical location where this condition manifests itself.", + "comment" : "Only used if not implicit in code found in Condition.code. If the use case requires attributes from the BodySite resource (e.g. to identify and track separately) then use the standard extension [bodySite](http://hl7.org/fhir/R4/extension-bodysite.html). May be a summary code, or a reference to a very precise definition of the location, or both.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition.bodySite", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "BodySite" + }], + "strength" : "example", + "description" : "Codes describing anatomical locations. May include laterality.", + "valueSet" : "http://hl7.org/fhir/ValueSet/body-site" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 442083009 |Anatomical or acquired body structure|" + }, + { + "identity" : "rim", + "map" : ".targetBodySiteCode" + }, + { + "identity" : "sct-attr", + "map" : "363698007" + }] + }, + { + "id" : "Condition.subject", + "path" : "Condition.subject", + "short" : "Who has the condition?", + "definition" : "Indicates the patient or group who the condition record is associated with.", + "requirements" : "Group is typically used for veterinary or public health use cases.", + "alias" : ["patient"], + "min" : 1, + "max" : "1", + "base" : { + "path" : "Condition.subject", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Patient", + "http://hl7.org/fhir/StructureDefinition/Group"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.subject" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject[x]" + }, + { + "identity" : "v2", + "map" : "PID-3" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=SBJ].role[classCode=PAT]" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject" + }] + }, + { + "id" : "Condition.encounter", + "path" : "Condition.encounter", + "short" : "Encounter created as part of", + "definition" : "The Encounter during which this Condition was created or to which the creation of this record is tightly associated.", + "comment" : "This will typically be the encounter the event occurred within, but some activities may be initiated prior to or after the official completion of an encounter but still be tied to the context of the encounter. This record indicates the encounter this particular record is associated with. In the case of a \"new\" diagnosis reflecting ongoing/revised information about the condition, this might be distinct from the first encounter in which the underlying condition was first \"known\".", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.encounter", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Encounter"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.context" + }, + { + "identity" : "w5", + "map" : "FiveWs.context" + }, + { + "identity" : "v2", + "map" : "PV1-19 (+PV1-54)" + }, + { + "identity" : "rim", + "map" : ".inboundRelationship[typeCode=COMP].source[classCode=ENC, moodCode=EVN]" + }] + }, + { + "id" : "Condition.onset[x]", + "path" : "Condition.onset[x]", + "short" : "Estimated or actual date, date-time, or age", + "definition" : "Estimated or actual date or date-time the condition began, in the opinion of the clinician.", + "comment" : "Age is generally used when the patient reports an age at which the Condition began to occur.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.onset[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "dateTime" + }, + { + "code" : "Age" + }, + { + "code" : "Period" + }, + { + "code" : "Range" + }, + { + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.occurrence[x]" + }, + { + "identity" : "w5", + "map" : "FiveWs.init" + }, + { + "identity" : "v2", + "map" : "PRB-16" + }, + { + "identity" : "rim", + "map" : ".effectiveTime.low or .inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"age at onset\"].value" + }] + }, + { + "id" : "Condition.abatement[x]", + "path" : "Condition.abatement[x]", + "short" : "When in resolution/remission", + "definition" : "The date or estimated date that the condition resolved or went into remission. This is called \"abatement\" because of the many overloaded connotations associated with \"remission\" or \"resolution\" - Conditions are never really resolved, but they can abate.", + "comment" : "There is no explicit distinction between resolution and remission because in many cases the distinction is not clear. Age is generally used when the patient reports an age at which the Condition abated. If there is no abatement element, it is unknown whether the condition has resolved or entered remission; applications and users should generally assume that the condition is still valid. When abatementString exists, it implies the condition is abated.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.abatement[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "dateTime" + }, + { + "code" : "Age" + }, + { + "code" : "Period" + }, + { + "code" : "Range" + }, + { + "code" : "string" + }], + "condition" : ["con-4"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.done[x]" + }, + { + "identity" : "rim", + "map" : ".effectiveTime.high or .inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"age at remission\"].value or .inboundRelationship[typeCode=SUBJ]source[classCode=CONC, moodCode=EVN].status=completed" + }] + }, + { + "id" : "Condition.recordedDate", + "path" : "Condition.recordedDate", + "short" : "Date record was first recorded", + "definition" : "The recordedDate represents when this particular Condition record was created in the system, which is often a system-generated date.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.recordedDate", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "dateTime" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.recorded" + }, + { + "identity" : "v2", + "map" : "REL-11" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=AUT].time" + }] + }, + { + "id" : "Condition.recorder", + "path" : "Condition.recorder", + "short" : "Who recorded the condition", + "definition" : "Individual who recorded the record and takes responsibility for its content.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.recorder", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Practitioner", + "http://hl7.org/fhir/StructureDefinition/PractitionerRole", + "http://hl7.org/fhir/StructureDefinition/Patient", + "http://hl7.org/fhir/StructureDefinition/RelatedPerson"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.author" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=AUT].role" + }] + }, + { + "id" : "Condition.asserter", + "path" : "Condition.asserter", + "short" : "Person who asserts this condition", + "definition" : "Individual who is making the condition statement.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.asserter", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Practitioner", + "http://hl7.org/fhir/StructureDefinition/PractitionerRole", + "http://hl7.org/fhir/StructureDefinition/Patient", + "http://hl7.org/fhir/StructureDefinition/RelatedPerson"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.source" + }, + { + "identity" : "v2", + "map" : "REL-7.1 identifier + REL-7.12 type code" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=INF].role" + }] + }, + { + "id" : "Condition.stage", + "path" : "Condition.stage", + "short" : "Stage/grade, usually assessed formally", + "definition" : "Clinical stage or grade of a condition. May include formal severity assessments.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition.stage", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "con-1", + "severity" : "error", + "human" : "Stage SHALL have summary or assessment", + "expression" : "summary.exists() or assessment.exists()", + "xpath" : "exists(f:summary) or exists(f:assessment)", + "source" : "http://hl7.org/fhir/StructureDefinition/Condition" + }, + { + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "./inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"stage/grade\"]" + }] + }, + { + "id" : "Condition.stage.id", + "path" : "Condition.stage.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Condition.stage.extension", + "path" : "Condition.stage.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Condition.stage.modifierExtension", + "path" : "Condition.stage.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Condition.stage.summary", + "path" : "Condition.stage.summary", + "short" : "Simple summary (disease specific)", + "definition" : "A simple summary of the stage such as \"Stage 3\". The determination of the stage is disease-specific.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.stage.summary", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["con-1"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ConditionStage" + }], + "strength" : "example", + "description" : "Codes describing condition stages (e.g. Cancer stages).", + "valueSet" : "http://hl7.org/fhir/ValueSet/condition-stage" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 254291000 |Staging and scales|" + }, + { + "identity" : "v2", + "map" : "PRB-14" + }, + { + "identity" : "rim", + "map" : ".value" + }] + }, + { + "id" : "Condition.stage.assessment", + "path" : "Condition.stage.assessment", + "short" : "Formal record of assessment", + "definition" : "Reference to a formal record of the evidence on which the staging assessment is based.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition.stage.assessment", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/ClinicalImpression", + "http://hl7.org/fhir/StructureDefinition/DiagnosticReport", + "http://hl7.org/fhir/StructureDefinition/Observation"] + }], + "condition" : ["con-1"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : ".self" + }] + }, + { + "id" : "Condition.stage.type", + "path" : "Condition.stage.type", + "short" : "Kind of staging", + "definition" : "The kind of staging, such as pathological or clinical staging.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Condition.stage.type", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ConditionStageType" + }], + "strength" : "example", + "description" : "Codes describing the kind of condition staging (e.g. clinical or pathological).", + "valueSet" : "http://hl7.org/fhir/ValueSet/condition-stage-type" + }, + "mapping" : [{ + "identity" : "rim", + "map" : "./inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"stage type\"]" + }] + }, + { + "id" : "Condition.evidence", + "path" : "Condition.evidence", + "short" : "Supporting evidence", + "definition" : "Supporting evidence / manifestations that are the basis of the Condition's verification status, such as evidence that confirmed or refuted the condition.", + "comment" : "The evidence may be a simple list of coded symptoms/manifestations, or references to observations or formal assessments, or both.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition.evidence", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "con-2", + "severity" : "error", + "human" : "evidence SHALL have code or details", + "expression" : "code.exists() or detail.exists()", + "xpath" : "exists(f:code) or exists(f:detail)", + "source" : "http://hl7.org/fhir/StructureDefinition/Condition" + }, + { + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=SPRT].target[classCode=OBS, moodCode=EVN]" + }] + }, + { + "id" : "Condition.evidence.id", + "path" : "Condition.evidence.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Condition.evidence.extension", + "path" : "Condition.evidence.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Condition.evidence.modifierExtension", + "path" : "Condition.evidence.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Condition.evidence.code", + "path" : "Condition.evidence.code", + "short" : "Manifestation/symptom", + "definition" : "A manifestation or symptom that led to the recording of this condition.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition.evidence.code", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["con-2"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ManifestationOrSymptom" + }], + "strength" : "example", + "description" : "Codes that describe the manifestation or symptoms of a condition.", + "valueSet" : "http://hl7.org/fhir/ValueSet/manifestation-or-symptom" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.reasonCode" + }, + { + "identity" : "w5", + "map" : "FiveWs.why[x]" + }, + { + "identity" : "sct-concept", + "map" : "< 404684003 |Clinical finding|" + }, + { + "identity" : "rim", + "map" : "[code=\"diagnosis\"].value" + }] + }, + { + "id" : "Condition.evidence.detail", + "path" : "Condition.evidence.detail", + "short" : "Supporting information found elsewhere", + "definition" : "Links to other relevant information, including pathology reports.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition.evidence.detail", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Resource"] + }], + "condition" : ["con-2"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.why[x]" + }, + { + "identity" : "rim", + "map" : ".self" + }] + }, + { + "id" : "Condition.note", + "path" : "Condition.note", + "short" : "Additional information about the Condition", + "definition" : "Additional information about the Condition. This is a general notes/comments entry for description of the Condition, its diagnosis and prognosis.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Condition.note", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Annotation" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.note" + }, + { + "identity" : "v2", + "map" : "NTE child of PRB" + }, + { + "identity" : "rim", + "map" : ".inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"annotation\"].value" + }] + }] + }, + "differential" : { + "element" : [{ + "id" : "Condition", + "path" : "Condition" + }, + { + "id" : "Condition.code", + "path" : "Condition.code", + "binding" : { + "strength" : "required", + "valueSet" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/phenotype-codes" + } + }] + } } \ No newline at end of file diff --git a/StructureDefinition-phenotype.profile.history.html b/StructureDefinition-phenotype.profile.history.html index 6c292dab..58caeda9 100644 --- a/StructureDefinition-phenotype.profile.history.html +++ b/StructureDefinition-phenotype.profile.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -298,7 +298,7 @@ <h2 id="root">Resource Profile: Phenotype - Change History</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -356,7 +356,7 @@ <h2 id="root">Resource Profile: Phenotype - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-phenotype.profile.json.html b/StructureDefinition-phenotype.profile.json.html index 14ff1069..00036f8f 100644 --- a/StructureDefinition-phenotype.profile.json.html +++ b/StructureDefinition-phenotype.profile.json.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: Phenotype - JSON Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -342,7 +342,7 @@ <h2 id="root">Resource Profile: Phenotype - JSON Profile</h2> "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a>" : "Phenotype", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a>" : "NCPI Phenotype", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a>" : "draft", - "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>" : [ { @@ -2379,7 +2379,7 @@ <h2 id="root">Resource Profile: Phenotype - JSON Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-phenotype.profile.ttl.html b/StructureDefinition-phenotype.profile.ttl.html index 2725d5d8..f39367f9 100644 --- a/StructureDefinition-phenotype.profile.ttl.html +++ b/StructureDefinition-phenotype.profile.ttl.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: Phenotype - TTL Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -329,11 +329,11 @@ <h2 id="root">Resource Profile: Phenotype - TTL Profile</h2> a fhir:StructureDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "phenotype"]; + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "phenotype"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description &amp; Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-phenotype-definitions.html#Condition\">Condition</a><a name=\"Condition\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/condition.html\">Condition</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Detailed information about conditions, problems or diagnoses</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-phenotype-definitions.html#Condition.code\">code</a><a name=\"Condition.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Identification of the condition, problem or diagnosis</span><br/><span style=\"font-weight:bold\">Binding: </span><a href=\"ValueSet-phenotype-codes.html\">Phenotype Codes</a> (<a href=\"http://hl7.org/fhir/R4/terminologies.html#required\" title=\"To be conformant, the concept in this element SHALL be from the specified value set.\">required</a>)</td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -342,14 +342,14 @@ <h2 id="root">Resource Profile: Phenotype - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "patient" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/phenotype"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Phenotype"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI Phenotype"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/phenotype"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Phenotype"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI Phenotype"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">fhir:StructureDefinition.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -365,9 +365,9 @@ <h2 id="root">Resource Profile: Phenotype - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Representation of phenotypic observations (present or absent)"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Representation of phenotypic observations (present or absent)"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping">fhir:StructureDefinition.mapping</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "workflow" ]; @@ -398,15 +398,15 @@ <h2 id="root">Resource Profile: Phenotype - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "sct-attr" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.uri">fhir:StructureDefinition.mapping.uri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://snomed.org/attributebinding" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.name">fhir:StructureDefinition.mapping.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "SNOMED CT Attribute Binding" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Condition"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Condition"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.baseDefinition">fhir:StructureDefinition.baseDefinition</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/Condition"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/Condition> - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot">fhir:StructureDefinition.snapshot</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot.element">fhir:StructureDefinition.snapshot.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2072,7 +2072,7 @@ <h2 id="root">Resource Profile: Phenotype - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 2; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.identity">fhir:ElementDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "rim" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.map">fhir:ElementDefinition.mapping.map</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> ".inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"annotation\"].value" ] ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential">fhir:StructureDefinition.differential</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential.element">fhir:StructureDefinition.differential.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2086,7 +2086,7 @@ <h2 id="root">Resource Profile: Phenotype - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.binding.valueSet">fhir:ElementDefinition.binding.valueSet</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/phenotype-codes"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/phenotype-codes> ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -2148,7 +2148,7 @@ <h2 id="root">Resource Profile: Phenotype - TTL Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-phenotype.profile.xml.html b/StructureDefinition-phenotype.profile.xml.html index db947ba1..00672d91 100644 --- a/StructureDefinition-phenotype.profile.xml.html +++ b/StructureDefinition-phenotype.profile.xml.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: Phenotype - XML Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -343,7 +343,7 @@ <h2 id="root">Resource Profile: Phenotype - XML Profile</h2> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Phenotype"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI Phenotype"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> - <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -2239,7 +2239,7 @@ <h2 id="root">Resource Profile: Phenotype - XML Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-phenotype.ttl b/StructureDefinition-phenotype.ttl index b3f5c98f..3f88ef03 100644 --- a/StructureDefinition-phenotype.ttl +++ b/StructureDefinition-phenotype.ttl @@ -7,11 +7,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/phenotype> a fhir:StructureDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "phenotype"]; + fhir:Resource.id [ fhir:value "phenotype"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-phenotype-definitions.html#Condition\">Condition</a><a name=\"Condition\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/condition.html\">Condition</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Detailed information about conditions, problems or diagnoses</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-phenotype-definitions.html#Condition.code\">code</a><a name=\"Condition.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Identification of the condition, problem or diagnosis</span><br/><span style=\"font-weight:bold\">Binding: </span><a href=\"ValueSet-phenotype-codes.html\">Phenotype Codes</a> (<a href=\"http://hl7.org/fhir/R4/terminologies.html#required\" title=\"To be conformant, the concept in this element SHALL be from the specified value set.\">required</a>)</td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -20,14 +20,14 @@ fhir:index 1; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; fhir:Extension.valueCode [ fhir:value "patient" ] - ]; - fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/phenotype"]; - fhir:StructureDefinition.version [ fhir:value "0.2.0"]; - fhir:StructureDefinition.name [ fhir:value "Phenotype"]; - fhir:StructureDefinition.title [ fhir:value "NCPI Phenotype"]; - fhir:StructureDefinition.status [ fhir:value "draft"]; - fhir:StructureDefinition.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/phenotype"]; # + fhir:StructureDefinition.version [ fhir:value "0.2.0"]; # + fhir:StructureDefinition.name [ fhir:value "Phenotype"]; # + fhir:StructureDefinition.title [ fhir:value "NCPI Phenotype"]; # + fhir:StructureDefinition.status [ fhir:value "draft"]; # + fhir:StructureDefinition.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:StructureDefinition.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -45,9 +45,9 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:StructureDefinition.description [ fhir:value "Representation of phenotypic observations (present or absent)"]; - fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; + ]; # + fhir:StructureDefinition.description [ fhir:value "Representation of phenotypic observations (present or absent)"]; # + fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; # fhir:StructureDefinition.mapping [ fhir:index 0; fhir:StructureDefinition.mapping.identity [ fhir:value "workflow" ]; @@ -78,15 +78,15 @@ fhir:StructureDefinition.mapping.identity [ fhir:value "sct-attr" ]; fhir:StructureDefinition.mapping.uri [ fhir:value "http://snomed.org/attributebinding" ]; fhir:StructureDefinition.mapping.name [ fhir:value "SNOMED CT Attribute Binding" ] - ]; - fhir:StructureDefinition.kind [ fhir:value "resource"]; - fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; - fhir:StructureDefinition.type [ fhir:value "Condition"]; + ]; # + fhir:StructureDefinition.kind [ fhir:value "resource"]; # + fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; # + fhir:StructureDefinition.type [ fhir:value "Condition"]; # fhir:StructureDefinition.baseDefinition [ fhir:value "http://hl7.org/fhir/StructureDefinition/Condition"; fhir:link <http://hl7.org/fhir/StructureDefinition/Condition> - ]; - fhir:StructureDefinition.derivation [ fhir:value "constraint"]; + ]; # + fhir:StructureDefinition.derivation [ fhir:value "constraint"]; # fhir:StructureDefinition.snapshot [ fhir:StructureDefinition.snapshot.element [ fhir:index 0; @@ -2141,7 +2141,7 @@ fhir:ElementDefinition.mapping.map [ fhir:value ".inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"annotation\"].value" ] ] ] - ]; + ]; # fhir:StructureDefinition.differential [ fhir:StructureDefinition.differential.element [ fhir:index 0; @@ -2159,7 +2159,7 @@ ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/StructureDefinition-phenotype.xlsx b/StructureDefinition-phenotype.xlsx index 959b3a6e..2ae454ca 100644 Binary files a/StructureDefinition-phenotype.xlsx and b/StructureDefinition-phenotype.xlsx differ diff --git a/StructureDefinition-phenotype.xml b/StructureDefinition-phenotype.xml index 0e1b2ff5..f88b7112 100644 --- a/StructureDefinition-phenotype.xml +++ b/StructureDefinition-phenotype.xml @@ -18,7 +18,7 @@ <name value="Phenotype"/> <title value="NCPI Phenotype"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/StructureDefinition-raw-data-observation-definitions.html b/StructureDefinition-raw-data-observation-definitions.html index 14b46483..5f69a633 100644 --- a/StructureDefinition-raw-data-observation-definitions.html +++ b/StructureDefinition-raw-data-observation-definitions.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -287,7 +287,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -317,7 +317,8 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> </ul> <a name="tabs-diff"> </a> <div id="tabs-diff"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Observation"> </a><span style="color: grey">1.</span> <b>Observation</b><a href="#diff_Observation" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Observation.code"> </a><span style="color: grey">2.</span> <b>Observation.code</b><a href="#diff_Observation.code" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..?</td></tr> @@ -330,7 +331,8 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> </div> <a name="tabs-key"> </a> <div id="tabs-key"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="key_Observation"> </a><span style="color: grey">1.</span> <b>Observation</b><a href="#key_Observation" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><span style='color:DarkGray'><p>Measurements and simple assertions made about a patient, device or other subject.</p> </span></td></tr> @@ -446,12 +448,13 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> </div> <a name="tabs-snap"> </a> <div id="tabs-snap"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Observation"> </a><span style="color: grey">1.</span> <b>Observation</b><a href="#Observation" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>Measurements and simple assertions made about a patient, device or other subject.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Vital SignsMeasurementResultsTests</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Vital Signs, Measurement, Results, Tests</td></tr> <tr><td>Comments</td><td><p>Used for simple observations such as device measurements, laboratory atomic results, vital signs, height, weight, smoking status, comments, etc. Other resources are used to provide context for observations such as laboratory reports, etc.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Observation.id"> </a><span style="color: grey">2.</span> <b>Observation.id</b><a href="#Observation.id" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -495,7 +498,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#Narrative">Narrative</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrativehtmlxhtmldisplay</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrative, html, xhtml, display</td></tr> <tr><td>Comments</td><td><p>Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a "text blob" or where text is additionally entered raw or narrated and encoded information is added later.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -505,7 +508,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/resource.html">Resource</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resourcesanonymous resourcescontained resources</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resources, anonymous resources, contained resources</td></tr> <tr><td>Comments</td><td><p>This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Observation.extension"> </a><span style="color: grey">8.</span> <b>Observation.extension</b><a href="#Observation.extension" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -513,7 +516,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -527,7 +530,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -546,7 +549,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>A plan, proposal or order that is fulfilled in whole or in part by this event. For example, a MedicationRequest may require a patient to have laboratory test performed before it is dispensed.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/careplan.html" title="http://hl7.org/fhir/StructureDefinition/CarePlan">CarePlan</a><a href="http://hl7.org/fhir/R4/devicerequest.html" title="http://hl7.org/fhir/StructureDefinition/DeviceRequest">DeviceRequest</a><a href="http://hl7.org/fhir/R4/immunizationrecommendation.html" title="http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation">ImmunizationRecommendation</a><a href="http://hl7.org/fhir/R4/medicationrequest.html" title="http://hl7.org/fhir/StructureDefinition/MedicationRequest">MedicationRequest</a><a href="http://hl7.org/fhir/R4/nutritionorder.html" title="http://hl7.org/fhir/StructureDefinition/NutritionOrder">NutritionOrder</a><a href="http://hl7.org/fhir/R4/servicerequest.html" title="http://hl7.org/fhir/StructureDefinition/ServiceRequest">ServiceRequest</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/careplan.html" title="http://hl7.org/fhir/StructureDefinition/CarePlan">CarePlan</a>|<a href="http://hl7.org/fhir/R4/devicerequest.html" title="http://hl7.org/fhir/StructureDefinition/DeviceRequest">DeviceRequest</a>|<a href="http://hl7.org/fhir/R4/immunizationrecommendation.html" title="http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation">ImmunizationRecommendation</a>|<a href="http://hl7.org/fhir/R4/medicationrequest.html" title="http://hl7.org/fhir/StructureDefinition/MedicationRequest">MedicationRequest</a>|<a href="http://hl7.org/fhir/R4/nutritionorder.html" title="http://hl7.org/fhir/StructureDefinition/NutritionOrder">NutritionOrder</a>|<a href="http://hl7.org/fhir/R4/servicerequest.html" title="http://hl7.org/fhir/StructureDefinition/ServiceRequest">ServiceRequest</a>)</td></tr> <tr><td>Requirements</td><td><p>Allows tracing of authorization for the event and tracking whether proposals/recommendations were acted upon.</p> </td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Fulfills</td></tr> @@ -556,7 +559,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>A larger event of which this particular Observation is a component or step. For example, an observation as part of a procedure.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/medicationadministration.html" title="http://hl7.org/fhir/StructureDefinition/MedicationAdministration">MedicationAdministration</a><a href="http://hl7.org/fhir/R4/medicationdispense.html" title="http://hl7.org/fhir/StructureDefinition/MedicationDispense">MedicationDispense</a><a href="http://hl7.org/fhir/R4/medicationstatement.html" title="http://hl7.org/fhir/StructureDefinition/MedicationStatement">MedicationStatement</a><a href="http://hl7.org/fhir/R4/procedure.html" title="http://hl7.org/fhir/StructureDefinition/Procedure">Procedure</a><a href="http://hl7.org/fhir/R4/immunization.html" title="http://hl7.org/fhir/StructureDefinition/Immunization">Immunization</a><a href="http://hl7.org/fhir/R4/imagingstudy.html" title="http://hl7.org/fhir/StructureDefinition/ImagingStudy">ImagingStudy</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/medicationadministration.html" title="http://hl7.org/fhir/StructureDefinition/MedicationAdministration">MedicationAdministration</a>|<a href="http://hl7.org/fhir/R4/medicationdispense.html" title="http://hl7.org/fhir/StructureDefinition/MedicationDispense">MedicationDispense</a>|<a href="http://hl7.org/fhir/R4/medicationstatement.html" title="http://hl7.org/fhir/StructureDefinition/MedicationStatement">MedicationStatement</a>|<a href="http://hl7.org/fhir/R4/procedure.html" title="http://hl7.org/fhir/StructureDefinition/Procedure">Procedure</a>|<a href="http://hl7.org/fhir/R4/immunization.html" title="http://hl7.org/fhir/StructureDefinition/Immunization">Immunization</a>|<a href="http://hl7.org/fhir/R4/imagingstudy.html" title="http://hl7.org/fhir/StructureDefinition/ImagingStudy">ImagingStudy</a>)</td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Container</td></tr> <tr><td>Comments</td><td><p>To link an Observation to an Encounter use <code>encounter</code>. See the <a href="http://hl7.org/fhir/R4/observation.html#obsgrouping">Notes</a> below for guidance on referencing another Observation.</p> </td></tr> @@ -617,7 +620,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -649,7 +652,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The patient, or group of patients, location, or device this observation is about and into whose record the observation is placed. If the actual focus of the observation is different from the subject (or a sample of, part, or region of the subject), the <code>focus</code> element or the <code>code</code> itself specifies the actual focus of the observation.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a><a href="http://hl7.org/fhir/R4/location.html" title="http://hl7.org/fhir/StructureDefinition/Location">Location</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a>|<a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a>|<a href="http://hl7.org/fhir/R4/location.html" title="http://hl7.org/fhir/StructureDefinition/Location">Location</a>)</td></tr> <tr><td>Requirements</td><td><p>Observations have no value if you don't know who or what they're about.</p> </td></tr> <tr><td>Comments</td><td><p>One would expect this element to be a cardinality of 1..1. The only circumstance in which the subject can be missing is when the observation is made by a device that does not know the patient. In this case, the observation SHALL be matched to a patient through some context/channel matching technique, and at this point, the observation should be updated.</p> @@ -660,7 +663,8 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>)</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/versions.html#std-process">Standards Status</a></td><td>Trial Use (from Normative)</td></tr> <tr><td>Comments</td><td><p>Typically, an observation is made about the subject - a patient, or group of patients, location, or device - and the distinction between the subject and what is directly measured for an observation is specified in the observation code itself ( e.g., "Blood Glucose") and does not need to be represented separately using this element. Use <code>specimen</code> if a reference to a specimen is required. If a code is required instead of a resource use either <code>bodysite</code> for bodysites or the standard extension <a href="http://hl7.org/fhir/R4/extension-observation-focuscode.html">focusCode</a>.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -669,7 +673,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The healthcare event (e.g. a patient and healthcare provider interaction) during which this observation is made.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html" title="http://hl7.org/fhir/StructureDefinition/Encounter">Encounter</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html" title="http://hl7.org/fhir/StructureDefinition/Encounter">Encounter</a>)</td></tr> <tr><td>Requirements</td><td><p>For some observations it may be important to know the link between an observation and a particular encounter.</p> </td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Context</td></tr> @@ -703,7 +707,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Who was responsible for asserting the observed value as "true".</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a><a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a><a href="http://hl7.org/fhir/R4/careteam.html" title="http://hl7.org/fhir/StructureDefinition/CareTeam">CareTeam</a><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a><a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a>|<a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a>|<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>|<a href="http://hl7.org/fhir/R4/careteam.html" title="http://hl7.org/fhir/StructureDefinition/CareTeam">CareTeam</a>|<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>)</td></tr> <tr><td>Requirements</td><td><p>May give a degree of confidence in the observation and also indicates where follow-up questions should be directed.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -792,7 +796,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The specimen that was used when this observation was made.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/specimen.html" title="http://hl7.org/fhir/StructureDefinition/Specimen">Specimen</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/specimen.html" title="http://hl7.org/fhir/StructureDefinition/Specimen">Specimen</a>)</td></tr> <tr><td>Comments</td><td><p>Should only be used if not implicit in code found in <code>Observation.code</code>. Observations are not made on specimens themselves; they are made on a subject, but in many cases by the means of a specimen. Note that although specimens are often involved, they are not always tracked and reported explicitly. Also note that observation resources may be used in contexts that track the specimen explicitly (e.g. Diagnostic Report).</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -801,7 +805,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The device used to generate the observation data.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a><a href="http://hl7.org/fhir/R4/devicemetric.html" title="http://hl7.org/fhir/StructureDefinition/DeviceMetric">DeviceMetric</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a>|<a href="http://hl7.org/fhir/R4/devicemetric.html" title="http://hl7.org/fhir/StructureDefinition/DeviceMetric">DeviceMetric</a>)</td></tr> <tr><td>Comments</td><td><p>Note that this is not meant to represent a device involved in the transmission of the result, e.g., a gateway. Such devices may be documented using the Provenance resource where relevant.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -828,7 +832,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -842,7 +846,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -909,7 +913,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>This observation is a group observation (e.g. a battery, a panel of tests, a set of vital sign measurements) that includes the target as a member of the group.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a><a href="http://hl7.org/fhir/R4/questionnaireresponse.html" title="http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse">QuestionnaireResponse</a><a href="http://hl7.org/fhir/R4/molecularsequence.html" title="http://hl7.org/fhir/StructureDefinition/MolecularSequence">MolecularSequence</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a>|<a href="http://hl7.org/fhir/R4/questionnaireresponse.html" title="http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse">QuestionnaireResponse</a>|<a href="http://hl7.org/fhir/R4/molecularsequence.html" title="http://hl7.org/fhir/StructureDefinition/MolecularSequence">MolecularSequence</a>)</td></tr> <tr><td>Comments</td><td><p>When using this element, an observation will typically have either a value or a set of related resources, although both may be present in some cases. For a discussion on the ways Observations can assembled in groups together, see <a href="http://hl7.org/fhir/R4/observation.html#obsgrouping">Notes</a> below. Note that a system may calculate results from <a href="http://hl7.org/fhir/R4/questionnaireresponse.html">QuestionnaireResponse</a> into a final score and represent the score as an Observation.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -918,7 +922,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The target resource that represents a measurement from which this observation value is derived. For example, a calculated anion gap or a fetal measurement based on an ultrasound image.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/documentreference.html" title="http://hl7.org/fhir/StructureDefinition/DocumentReference">DocumentReference</a><a href="http://hl7.org/fhir/R4/imagingstudy.html" title="http://hl7.org/fhir/StructureDefinition/ImagingStudy">ImagingStudy</a><a href="http://hl7.org/fhir/R4/media.html" title="http://hl7.org/fhir/StructureDefinition/Media">Media</a><a href="http://hl7.org/fhir/R4/questionnaireresponse.html" title="http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse">QuestionnaireResponse</a><a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a><a href="http://hl7.org/fhir/R4/molecularsequence.html" title="http://hl7.org/fhir/StructureDefinition/MolecularSequence">MolecularSequence</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/documentreference.html" title="http://hl7.org/fhir/StructureDefinition/DocumentReference">DocumentReference</a>|<a href="http://hl7.org/fhir/R4/imagingstudy.html" title="http://hl7.org/fhir/StructureDefinition/ImagingStudy">ImagingStudy</a>|<a href="http://hl7.org/fhir/R4/media.html" title="http://hl7.org/fhir/StructureDefinition/Media">Media</a>|<a href="http://hl7.org/fhir/R4/questionnaireresponse.html" title="http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse">QuestionnaireResponse</a>|<a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a>|<a href="http://hl7.org/fhir/R4/molecularsequence.html" title="http://hl7.org/fhir/StructureDefinition/MolecularSequence">MolecularSequence</a>)</td></tr> <tr><td>Comments</td><td><p>All the reference choices that are listed in this element can represent clinical observations and other measurements that may be the source for a derived value. The most common reference will be another Observation. For a discussion on the ways Observations can assembled in groups together, see <a href="http://hl7.org/fhir/R4/observation.html#obsgrouping">Notes</a> below.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -945,7 +949,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -959,7 +963,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -1087,7 +1091,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Detailed Descriptions</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-raw-data-observation-examples.html b/StructureDefinition-raw-data-observation-examples.html index 79de06a4..725d33c2 100644 --- a/StructureDefinition-raw-data-observation-examples.html +++ b/StructureDefinition-raw-data-observation-examples.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -287,7 +287,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Examples</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -357,7 +357,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Examples</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-raw-data-observation-mappings.html b/StructureDefinition-raw-data-observation-mappings.html index 4394e1db..ab3731b3 100644 --- a/StructureDefinition-raw-data-observation-mappings.html +++ b/StructureDefinition-raw-data-observation-mappings.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -287,7 +287,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Mappings</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -508,7 +508,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Mappings</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-raw-data-observation-testing.html b/StructureDefinition-raw-data-observation-testing.html index 243308b8..7a665bb9 100644 --- a/StructureDefinition-raw-data-observation-testing.html +++ b/StructureDefinition-raw-data-observation-testing.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -287,7 +287,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Testing</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -352,7 +352,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Testing</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-raw-data-observation.html b/StructureDefinition-raw-data-observation.html index 7fb3e7f1..8cfef952 100644 --- a/StructureDefinition-raw-data-observation.html +++ b/StructureDefinition-raw-data-observation.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -311,7 +311,7 @@ <h2 id="root">Resource Profile: Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -497,7 +497,7 @@ <h4>Constraints</h4> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7" id="a13.c"><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck110.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vline.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_datatype.gif" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Data Type" class="hierarchy"/> <a href="StructureDefinition-raw-data-observation-definitions.html#Observation.code.coding" title="A reference to a code defined by a terminology system.">coding</a><a name="Observation.code.coding"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">1..*</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#Coding">Coding</a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Code defined by a terminology system<br/></td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white" id="a13.d"><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck100.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vline.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin_end.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: white; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <a href="StructureDefinition-raw-data-observation-definitions.html#Observation.code.text" title="A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user.">text</a><a name="Observation.code.text"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#string">string</a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Plain text representation of the concept</td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7" id="a14."><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_reference.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Reference to another Resource" class="hierarchy"/> <a href="StructureDefinition-raw-data-observation-definitions.html#Observation.subject" title="The patient, or group of patients, location, or device this observation is about and into whose record the observation is placed. If the actual focus of the observation is different from the subject (or a sample of, part, or region of the subject), the `focus` element or the `code` itself specifies the actual focus of the observation.">subject</a><a name="Observation.subject"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/references.html">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html">Patient</a> | <a href="http://hl7.org/fhir/R4/group.html">Group</a> | <a href="http://hl7.org/fhir/R4/device.html">Device</a> | <a href="http://hl7.org/fhir/R4/location.html">Location</a>)</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Who and/or what the observation is about</td></tr> -<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white" id="a15."><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_reference.png" alt="." style="background-color: white; background-color: inherit" title="Reference to another Resource" class="hierarchy"/> <a href="StructureDefinition-raw-data-observation-definitions.html#Observation.focus" title="The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.">focus</a><a name="Observation.focus"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..*</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/references.html">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html">Resource</a>)</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">What the observation is about, when it is not about the subject of record<br/></td></tr> +<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white" id="a15."><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_reference.png" alt="." style="background-color: white; background-color: inherit" title="Reference to another Resource" class="hierarchy"/> <a href="StructureDefinition-raw-data-observation-definitions.html#Observation.focus" title="The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.">focus</a><a name="Observation.focus"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span><a style="padding-left: 3px; padding-right: 3px; border: 1px grey solid; font-weight: bold; color: black; background-color: #fff5e6" href="http://hl7.org/fhir/R4/versions.html#std-process" title="Standards Status = Trial Use">TU</a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..*</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/references.html">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html">Resource</a>)</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">What the observation is about, when it is not about the subject of record<br/></td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7" id="a16."><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_reference.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Reference to another Resource" class="hierarchy"/> <a href="StructureDefinition-raw-data-observation-definitions.html#Observation.encounter" title="The healthcare event (e.g. a patient and healthcare provider interaction) during which this observation is made.">encounter</a><a name="Observation.encounter"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/references.html">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html">Encounter</a>)</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Healthcare event during which this observation is made</td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white" id="a17."><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img onClick="tableRowAction(this)" src="tbl_vjoin-open.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_choice.gif" alt="." style="background-color: white; background-color: inherit" title="Choice of Types" class="hierarchy"/> <a href="StructureDefinition-raw-data-observation-definitions.html#Observation.effective[x]" title="The time or time-period the observed value is asserted as being true. For biological subjects - e.g. human patients - this is usually called the "physiologically relevant time". This is usually either the time of the procedure or of specimen collection, but very often the source of the date/time is not known, only the date/time itself.">effective[x]</a><a name="Observation.effective_x_"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Clinically relevant time/time-period for observation</td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7" id="a17.a"><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck110.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vline.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <span title="Base StructureDefinition for dateTime Type: A date, date-time or partial date (e.g. just year or year + month). If hours and minutes are specified, a time zone SHALL be populated. The format is a union of the schema types gYear, gYearMonth, date and dateTime. Seconds must be provided due to schema type constraints but may be zero-filled and may be ignored. Dates SHALL be valid dates.">effectiveDateTime</span></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">dateTime</a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"></td></tr> @@ -846,7 +846,7 @@ <h4>Constraints</h4> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7" id="a13.c"><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck110.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vline.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_datatype.gif" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Data Type" class="hierarchy"/> <a href="StructureDefinition-raw-data-observation-definitions.html#Observation.code.coding" title="A reference to a code defined by a terminology system.">coding</a><a name="Observation.code.coding"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">1..*</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#Coding">Coding</a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Code defined by a terminology system<br/></td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white" id="a13.d"><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck100.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vline.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin_end.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: white; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <a href="StructureDefinition-raw-data-observation-definitions.html#Observation.code.text" title="A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user.">text</a><a name="Observation.code.text"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#string">string</a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Plain text representation of the concept</td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7" id="a14."><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_reference.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Reference to another Resource" class="hierarchy"/> <a href="StructureDefinition-raw-data-observation-definitions.html#Observation.subject" title="The patient, or group of patients, location, or device this observation is about and into whose record the observation is placed. If the actual focus of the observation is different from the subject (or a sample of, part, or region of the subject), the `focus` element or the `code` itself specifies the actual focus of the observation.">subject</a><a name="Observation.subject"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/references.html">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html">Patient</a> | <a href="http://hl7.org/fhir/R4/group.html">Group</a> | <a href="http://hl7.org/fhir/R4/device.html">Device</a> | <a href="http://hl7.org/fhir/R4/location.html">Location</a>)</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Who and/or what the observation is about</td></tr> -<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white" id="a15."><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_reference.png" alt="." style="background-color: white; background-color: inherit" title="Reference to another Resource" class="hierarchy"/> <a href="StructureDefinition-raw-data-observation-definitions.html#Observation.focus" title="The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.">focus</a><a name="Observation.focus"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..*</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/references.html">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html">Resource</a>)</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">What the observation is about, when it is not about the subject of record<br/></td></tr> +<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white" id="a15."><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_reference.png" alt="." style="background-color: white; background-color: inherit" title="Reference to another Resource" class="hierarchy"/> <a href="StructureDefinition-raw-data-observation-definitions.html#Observation.focus" title="The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.">focus</a><a name="Observation.focus"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span><a style="padding-left: 3px; padding-right: 3px; border: 1px grey solid; font-weight: bold; color: black; background-color: #fff5e6" href="http://hl7.org/fhir/R4/versions.html#std-process" title="Standards Status = Trial Use">TU</a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..*</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/references.html">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html">Resource</a>)</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">What the observation is about, when it is not about the subject of record<br/></td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7" id="a16."><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_reference.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Reference to another Resource" class="hierarchy"/> <a href="StructureDefinition-raw-data-observation-definitions.html#Observation.encounter" title="The healthcare event (e.g. a patient and healthcare provider interaction) during which this observation is made.">encounter</a><a name="Observation.encounter"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/references.html">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html">Encounter</a>)</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Healthcare event during which this observation is made</td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white" id="a17."><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img onClick="tableRowAction(this)" src="tbl_vjoin-open.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_choice.gif" alt="." style="background-color: white; background-color: inherit" title="Choice of Types" class="hierarchy"/> <a href="StructureDefinition-raw-data-observation-definitions.html#Observation.effective[x]" title="The time or time-period the observed value is asserted as being true. For biological subjects - e.g. human patients - this is usually called the "physiologically relevant time". This is usually either the time of the procedure or of specimen collection, but very often the source of the date/time is not known, only the date/time itself.">effective[x]</a><a name="Observation.effective_x_"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: black; null" title="This element is included in summaries">ÎŁ</span></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Clinically relevant time/time-period for observation</td></tr> <tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7" id="a17.a"><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck110.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vline.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <span title="Base StructureDefinition for dateTime Type: A date, date-time or partial date (e.g. just year or year + month). If hours and minutes are specified, a time zone SHALL be populated. The format is a union of the schema types gYear, gYearMonth, date and dateTime. Seconds must be provided due to schema type constraints but may be zero-filled and may be ignored. Dates SHALL be valid dates.">effectiveDateTime</span></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">dateTime</a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"></td></tr> @@ -1172,7 +1172,7 @@ <h4 id="each-non-missing-column-should-be-present">Each Non-Missing Column Shoul <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-raw-data-observation.json b/StructureDefinition-raw-data-observation.json index 8b7fb176..f003bf30 100644 --- a/StructureDefinition-raw-data-observation.json +++ b/StructureDefinition-raw-data-observation.json @@ -1,2925 +1,2491 @@ -{ - "resourceType": "StructureDefinition", - "id": "raw-data-observation", - "text": { - "status": "extensions", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-raw-data-observation-definitions.html#Observation\">Observation</a><a name=\"Observation\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observation.html\">Observation</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Measurements and simple assertions</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-raw-data-observation-definitions.html#Observation.code\">code</a><a name=\"Observation.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck100.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-raw-data-observation-definitions.html#Observation.code.coding\">coding</a><a name=\"Observation.code.coding\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Code defined by a terminology system</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-raw-data-observation-definitions.html#Observation.component\">component</a><a name=\"Observation.component\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#BackboneElement\">BackboneElement</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Component results</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - }, - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", - "valueString": "Clinical.Diagnostics" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", - "valueCode": "patient" - } - ], - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/raw-data-observation", - "version": "0.2.0", - "name": "RawDataObservation", - "title": "Raw Data Observation", - "status": "active", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "Representation for a row of data from one of the dataset's tables.", - "fhirVersion": "4.0.1", - "mapping": [ - { - "identity": "workflow", - "uri": "http://hl7.org/fhir/workflow", - "name": "Workflow Pattern" - }, - { - "identity": "sct-concept", - "uri": "http://snomed.info/conceptdomain", - "name": "SNOMED CT Concept Domain Binding" - }, - { - "identity": "v2", - "uri": "http://hl7.org/v2", - "name": "HL7 v2 Mapping" - }, - { - "identity": "rim", - "uri": "http://hl7.org/v3", - "name": "RIM Mapping" - }, - { - "identity": "w5", - "uri": "http://hl7.org/fhir/fivews", - "name": "FiveWs Pattern Mapping" - }, - { - "identity": "sct-attr", - "uri": "http://snomed.org/attributebinding", - "name": "SNOMED CT Attribute Binding" - } - ], - "kind": "resource", - "abstract": false, - "type": "Observation", - "baseDefinition": "http://hl7.org/fhir/StructureDefinition/Observation", - "derivation": "constraint", - "snapshot": { - "element": [ - { - "id": "Observation", - "path": "Observation", - "short": "Measurements and simple assertions", - "definition": "Measurements and simple assertions made about a patient, device or other subject.", - "comment": "Used for simple observations such as device measurements, laboratory atomic results, vital signs, height, weight, smoking status, comments, etc. Other resources are used to provide context for observations such as laboratory reports, etc.", - "alias": [ - "Vital Signs", - "Measurement", - "Results", - "Tests" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation", - "min": 0, - "max": "*" - }, - "constraint": [ - { - "key": "dom-2", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL NOT contain nested Resources", - "expression": "contained.contained.empty()", - "xpath": "not(parent::f:contained and f:contained)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-3", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", - "expression": "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", - "xpath": "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-4", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", - "expression": "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-5", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a security label", - "expression": "contained.meta.security.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:security))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", - "valueBoolean": true - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", - "valueMarkdown": "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." - } - ], - "key": "dom-6", - "severity": "warning", - "human": "A resource should have narrative for robust management", - "expression": "text.`div`.exists()", - "xpath": "exists(f:text/h:div)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "obs-6", - "severity": "error", - "human": "dataAbsentReason SHALL only be present if Observation.value[x] is not present", - "expression": "dataAbsentReason.empty() or value.empty()", - "xpath": "not(exists(f:dataAbsentReason)) or (not(exists(*[starts-with(local-name(.), 'value')])))", - "source": "http://hl7.org/fhir/StructureDefinition/Observation" - }, - { - "key": "obs-7", - "severity": "error", - "human": "If Observation.code is the same as an Observation.component.code then the value element associated with the code SHALL NOT be present", - "expression": "value.empty() or component.code.where(coding.intersect(%resource.code.coding).exists()).empty()", - "xpath": "not(f:*[starts-with(local-name(.), 'value')] and (for $coding in f:code/f:coding return f:component/f:code/f:coding[f:code/@value=$coding/f:code/@value] [f:system/@value=$coding/f:system/@value]))", - "source": "http://hl7.org/fhir/StructureDefinition/Observation" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Entity. Role, or Act" - }, - { - "identity": "workflow", - "map": "Event" - }, - { - "identity": "sct-concept", - "map": "< 363787002 |Observable entity|" - }, - { - "identity": "v2", - "map": "OBX" - }, - { - "identity": "rim", - "map": "Observation[classCode=OBS, moodCode=EVN]" - } - ] - }, - { - "id": "Observation.id", - "path": "Observation.id", - "short": "Logical id of this artifact", - "definition": "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", - "comment": "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "id" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "Observation.meta", - "path": "Observation.meta", - "short": "Metadata about the resource", - "definition": "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.meta", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Meta" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "Observation.implicitRules", - "path": "Observation.implicitRules", - "short": "A set of rules under which this content was created", - "definition": "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", - "comment": "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.implicitRules", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", - "isSummary": true - }, - { - "id": "Observation.language", - "path": "Observation.language", - "short": "Language of the resource content", - "definition": "The base language in which the resource is written.", - "comment": "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", - "min": 0, - "max": "1", - "base": { - "path": "Resource.language", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", - "valueCanonical": "http://hl7.org/fhir/ValueSet/all-languages" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "Language" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "preferred", - "description": "A human language.", - "valueSet": "http://hl7.org/fhir/ValueSet/languages" - } - }, - { - "id": "Observation.text", - "path": "Observation.text", - "short": "Text summary of the resource, for human interpretation", - "definition": "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", - "comment": "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", - "alias": [ - "narrative", - "html", - "xhtml", - "display" - ], - "min": 0, - "max": "1", - "base": { - "path": "DomainResource.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Narrative" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Act.text?" - } - ] - }, - { - "id": "Observation.contained", - "path": "Observation.contained", - "short": "Contained, inline Resources", - "definition": "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", - "comment": "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", - "alias": [ - "inline resources", - "anonymous resources", - "contained resources" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.contained", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Resource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.extension", - "path": "Observation.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.modifierExtension", - "path": "Observation.modifierExtension", - "short": "Extensions that cannot be ignored", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.identifier", - "path": "Observation.identifier", - "short": "Business Identifier for observation", - "definition": "A unique identifier assigned to this observation.", - "requirements": "Allows observations to be distinguished and referenced.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.identifier", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Identifier" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.identifier" - }, - { - "identity": "w5", - "map": "FiveWs.identifier" - }, - { - "identity": "v2", - "map": "OBX.21 For OBX segments from systems without OBX-21 support a combination of ORC/OBR and OBX must be negotiated between trading partners to uniquely identify the OBX segment. Depending on how V2 has been implemented each of these may be an option: 1) OBR-3 + OBX-3 + OBX-4 or 2) OBR-3 + OBR-4 + OBX-3 + OBX-4 or 2) some other way to uniquely ID the OBR/ORC + OBX-3 + OBX-4." - }, - { - "identity": "rim", - "map": "id" - } - ] - }, - { - "id": "Observation.basedOn", - "path": "Observation.basedOn", - "short": "Fulfills plan, proposal or order", - "definition": "A plan, proposal or order that is fulfilled in whole or in part by this event. For example, a MedicationRequest may require a patient to have laboratory test performed before it is dispensed.", - "requirements": "Allows tracing of authorization for the event and tracking whether proposals/recommendations were acted upon.", - "alias": [ - "Fulfills" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation.basedOn", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/CarePlan", - "http://hl7.org/fhir/StructureDefinition/DeviceRequest", - "http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation", - "http://hl7.org/fhir/StructureDefinition/MedicationRequest", - "http://hl7.org/fhir/StructureDefinition/NutritionOrder", - "http://hl7.org/fhir/StructureDefinition/ServiceRequest" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.basedOn" - }, - { - "identity": "v2", - "map": "ORC" - }, - { - "identity": "rim", - "map": ".inboundRelationship[typeCode=COMP].source[moodCode=EVN]" - } - ] - }, - { - "id": "Observation.partOf", - "path": "Observation.partOf", - "short": "Part of referenced event", - "definition": "A larger event of which this particular Observation is a component or step. For example, an observation as part of a procedure.", - "comment": "To link an Observation to an Encounter use `encounter`. See the [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below for guidance on referencing another Observation.", - "alias": [ - "Container" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation.partOf", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/MedicationAdministration", - "http://hl7.org/fhir/StructureDefinition/MedicationDispense", - "http://hl7.org/fhir/StructureDefinition/MedicationStatement", - "http://hl7.org/fhir/StructureDefinition/Procedure", - "http://hl7.org/fhir/StructureDefinition/Immunization", - "http://hl7.org/fhir/StructureDefinition/ImagingStudy" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.partOf" - }, - { - "identity": "v2", - "map": "Varies by domain" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=FLFS].target" - } - ] - }, - { - "id": "Observation.status", - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-display-hint", - "valueString": "default: final" - } - ], - "path": "Observation.status", - "short": "registered | preliminary | final | amended +", - "definition": "The status of the result value.", - "comment": "This element is labeled as a modifier because the status contains codes that mark the resource as not currently valid.", - "requirements": "Need to track the status of individual results. Some results are finalized before the whole report is finalized.", - "min": 1, - "max": "1", - "base": { - "path": "Observation.status", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid", - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationStatus" - } - ], - "strength": "required", - "description": "Codes providing the status of an observation.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-status|4.0.1" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.status" - }, - { - "identity": "w5", - "map": "FiveWs.status" - }, - { - "identity": "sct-concept", - "map": "< 445584004 |Report by finality status|" - }, - { - "identity": "v2", - "map": "OBX-11" - }, - { - "identity": "rim", - "map": "status Amended & Final are differentiated by whether it is the subject of a ControlAct event with a type of \"revise\"" - } - ] - }, - { - "id": "Observation.category", - "path": "Observation.category", - "short": "Classification of type of observation", - "definition": "A code that classifies the general type of observation being made.", - "comment": "In addition to the required category valueset, this element allows various categorization schemes based on the owner’s definition of the category and effectively multiple categories can be used at once. The level of granularity is defined by the category concepts in the value set.", - "requirements": "Used for filtering what observations are retrieved and displayed.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.category", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationCategory" - } - ], - "strength": "preferred", - "description": "Codes for high level observation categories.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-category" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.class" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=\"COMP].target[classCode=\"LIST\", moodCode=\"EVN\"].code" - } - ] - }, - { - "id": "Observation.code", - "path": "Observation.code", - "short": "Type of observation (code / type)", - "definition": "Describes what was observed. Sometimes this is called the observation \"name\".", - "comment": "*All* code-value and, if present, component.code-component.value pairs need to be taken into account to correctly understand the meaning of the observation.", - "requirements": "Knowing what kind of observation is being made is essential to understanding the observation.", - "alias": [ - "Name" - ], - "min": 1, - "max": "1", - "base": { - "path": "Observation.code", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationCode" - } - ], - "strength": "example", - "description": "Codes identifying names of simple observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-codes" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.code" - }, - { - "identity": "w5", - "map": "FiveWs.what[x]" - }, - { - "identity": "sct-concept", - "map": "< 363787002 |Observable entity| OR < 386053000 |Evaluation procedure|" - }, - { - "identity": "v2", - "map": "OBX-3" - }, - { - "identity": "rim", - "map": "code" - }, - { - "identity": "sct-attr", - "map": "116680003 |Is a|" - } - ] - }, - { - "id": "Observation.code.id", - "path": "Observation.code.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.code.extension", - "path": "Observation.code.extension", - "slicing": { - "discriminator": [ - { - "type": "value", - "path": "url" - } - ], - "description": "Extensions are always sliced by (at least) url", - "rules": "open" - }, - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.code.coding", - "path": "Observation.code.coding", - "short": "Code defined by a terminology system", - "definition": "A reference to a code defined by a terminology system.", - "comment": "Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.", - "requirements": "Allows for alternative encodings within a code system, and translations to other code systems.", - "min": 1, - "max": "*", - "base": { - "path": "CodeableConcept.coding", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Coding" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "C*E.1-8, C*E.10-22" - }, - { - "identity": "rim", - "map": "union(., ./translation)" - }, - { - "identity": "orim", - "map": "fhir:CodeableConcept.coding rdfs:subPropertyOf dt:CD.coding" - } - ] - }, - { - "id": "Observation.code.text", - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable", - "valueBoolean": true - } - ], - "path": "Observation.code.text", - "short": "Plain text representation of the concept", - "definition": "A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user.", - "comment": "Very often the text is the same as a displayName of one of the codings.", - "requirements": "The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source.", - "min": 0, - "max": "1", - "base": { - "path": "CodeableConcept.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "C*E.9. But note many systems use C*E.2 for this" - }, - { - "identity": "rim", - "map": "./originalText[mediaType/code=\"text/plain\"]/data" - }, - { - "identity": "orim", - "map": "fhir:CodeableConcept.text rdfs:subPropertyOf dt:CD.originalText" - } - ] - }, - { - "id": "Observation.subject", - "path": "Observation.subject", - "short": "Who and/or what the observation is about", - "definition": "The patient, or group of patients, location, or device this observation is about and into whose record the observation is placed. If the actual focus of the observation is different from the subject (or a sample of, part, or region of the subject), the `focus` element or the `code` itself specifies the actual focus of the observation.", - "comment": "One would expect this element to be a cardinality of 1..1. The only circumstance in which the subject can be missing is when the observation is made by a device that does not know the patient. In this case, the observation SHALL be matched to a patient through some context/channel matching technique, and at this point, the observation should be updated.", - "requirements": "Observations have no value if you don't know who or what they're about.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.subject", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Patient", - "http://hl7.org/fhir/StructureDefinition/Group", - "http://hl7.org/fhir/StructureDefinition/Device", - "http://hl7.org/fhir/StructureDefinition/Location" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.subject" - }, - { - "identity": "w5", - "map": "FiveWs.subject[x]" - }, - { - "identity": "v2", - "map": "PID-3" - }, - { - "identity": "rim", - "map": "participation[typeCode=RTGT]" - }, - { - "identity": "w5", - "map": "FiveWs.subject" - } - ] - }, - { - "id": "Observation.focus", - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status", - "valueCode": "trial-use" - } - ], - "path": "Observation.focus", - "short": "What the observation is about, when it is not about the subject of record", - "definition": "The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.", - "comment": "Typically, an observation is made about the subject - a patient, or group of patients, location, or device - and the distinction between the subject and what is directly measured for an observation is specified in the observation code itself ( e.g., \"Blood Glucose\") and does not need to be represented separately using this element. Use `specimen` if a reference to a specimen is required. If a code is required instead of a resource use either `bodysite` for bodysites or the standard extension [focusCode](http://hl7.org/fhir/R4/extension-observation-focuscode.html).", - "min": 0, - "max": "*", - "base": { - "path": "Observation.focus", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Resource" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.subject[x]" - }, - { - "identity": "v2", - "map": "OBX-3" - }, - { - "identity": "rim", - "map": "participation[typeCode=SBJ]" - }, - { - "identity": "w5", - "map": "FiveWs.subject" - } - ] - }, - { - "id": "Observation.encounter", - "path": "Observation.encounter", - "short": "Healthcare event during which this observation is made", - "definition": "The healthcare event (e.g. a patient and healthcare provider interaction) during which this observation is made.", - "comment": "This will typically be the encounter the event occurred within, but some events may be initiated prior to or after the official completion of an encounter but still be tied to the context of the encounter (e.g. pre-admission laboratory tests).", - "requirements": "For some observations it may be important to know the link between an observation and a particular encounter.", - "alias": [ - "Context" - ], - "min": 0, - "max": "1", - "base": { - "path": "Observation.encounter", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Encounter" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.context" - }, - { - "identity": "w5", - "map": "FiveWs.context" - }, - { - "identity": "v2", - "map": "PV1" - }, - { - "identity": "rim", - "map": "inboundRelationship[typeCode=COMP].source[classCode=ENC, moodCode=EVN]" - } - ] - }, - { - "id": "Observation.effective[x]", - "path": "Observation.effective[x]", - "short": "Clinically relevant time/time-period for observation", - "definition": "The time or time-period the observed value is asserted as being true. For biological subjects - e.g. human patients - this is usually called the \"physiologically relevant time\". This is usually either the time of the procedure or of specimen collection, but very often the source of the date/time is not known, only the date/time itself.", - "comment": "At least a date should be present unless this observation is a historical report. For recording imprecise or \"fuzzy\" times (For example, a blood glucose measurement taken \"after breakfast\") use the [Timing](http://hl7.org/fhir/R4/datatypes.html#timing) datatype which allow the measurement to be tied to regular life events.", - "requirements": "Knowing when an observation was deemed true is important to its relevance as well as determining trends.", - "alias": [ - "Occurrence" - ], - "min": 0, - "max": "1", - "base": { - "path": "Observation.effective[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "dateTime" - }, - { - "code": "Period" - }, - { - "code": "Timing" - }, - { - "code": "instant" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.occurrence[x]" - }, - { - "identity": "w5", - "map": "FiveWs.done[x]" - }, - { - "identity": "v2", - "map": "OBX-14, and/or OBX-19 after v2.4 (depends on who observation made)" - }, - { - "identity": "rim", - "map": "effectiveTime" - } - ] - }, - { - "id": "Observation.issued", - "path": "Observation.issued", - "short": "Date/Time this version was made available", - "definition": "The date and time this version of the observation was made available to providers, typically after the results have been reviewed and verified.", - "comment": "For Observations that don’t require review and verification, it may be the same as the [`lastUpdated` ](http://hl7.org/fhir/R4/resource-definitions.html#Meta.lastUpdated) time of the resource itself. For Observations that do require review and verification for certain updates, it might not be the same as the `lastUpdated` time of the resource itself due to a non-clinically significant update that doesn’t require the new version to be reviewed and verified again.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.issued", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "instant" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.recorded" - }, - { - "identity": "v2", - "map": "OBR.22 (or MSH.7), or perhaps OBX-19 (depends on who observation made)" - }, - { - "identity": "rim", - "map": "participation[typeCode=AUT].time" - } - ] - }, - { - "id": "Observation.performer", - "path": "Observation.performer", - "short": "Who is responsible for the observation", - "definition": "Who was responsible for asserting the observed value as \"true\".", - "requirements": "May give a degree of confidence in the observation and also indicates where follow-up questions should be directed.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.performer", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Practitioner", - "http://hl7.org/fhir/StructureDefinition/PractitionerRole", - "http://hl7.org/fhir/StructureDefinition/Organization", - "http://hl7.org/fhir/StructureDefinition/CareTeam", - "http://hl7.org/fhir/StructureDefinition/Patient", - "http://hl7.org/fhir/StructureDefinition/RelatedPerson" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.performer.actor" - }, - { - "identity": "w5", - "map": "FiveWs.actor" - }, - { - "identity": "v2", - "map": "OBX.15 / (Practitioner) OBX-16, PRT-5:PRT-4='RO' / (Device) OBX-18 , PRT-10:PRT-4='EQUIP' / (Organization) OBX-23, PRT-8:PRT-4='PO'" - }, - { - "identity": "rim", - "map": "participation[typeCode=PRF]" - } - ] - }, - { - "id": "Observation.value[x]", - "path": "Observation.value[x]", - "short": "Actual result", - "definition": "The information determined as a result of making the observation, if the information has a simple value.", - "comment": "An observation may have; 1) a single value here, 2) both a value and a set of related or component values, or 3) only a set of related or component values. If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", - "requirements": "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.value[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Quantity" - }, - { - "code": "CodeableConcept" - }, - { - "code": "string" - }, - { - "code": "boolean" - }, - { - "code": "integer" - }, - { - "code": "Range" - }, - { - "code": "Ratio" - }, - { - "code": "SampledData" - }, - { - "code": "time" - }, - { - "code": "dateTime" - }, - { - "code": "Period" - } - ], - "condition": [ - "obs-7" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 441742003 |Evaluation finding|" - }, - { - "identity": "v2", - "map": "OBX.2, OBX.5, OBX.6" - }, - { - "identity": "rim", - "map": "value" - }, - { - "identity": "sct-attr", - "map": "363714003 |Interprets|" - } - ] - }, - { - "id": "Observation.dataAbsentReason", - "path": "Observation.dataAbsentReason", - "short": "Why the result is missing", - "definition": "Provides a reason why the expected value in the element Observation.value[x] is missing.", - "comment": "Null or exceptional values can be represented two ways in FHIR Observations. One way is to simply include them in the value set and represent the exceptions in the value. For example, measurement values for a serology test could be \"detected\", \"not detected\", \"inconclusive\", or \"specimen unsatisfactory\". \n\nThe alternate way is to use the value element for actual observations and use the explicit dataAbsentReason element to record exceptional values. For example, the dataAbsentReason code \"error\" could be used when the measurement was not completed. Note that an observation may only be reported if there are values to report. For example differential cell counts values may be reported only when > 0. Because of these options, use-case agreements are required to interpret general observations for null or exceptional values.", - "requirements": "For many results it is necessary to handle exceptional values in measurements.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.dataAbsentReason", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "obs-6" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationValueAbsentReason" - } - ], - "strength": "extensible", - "description": "Codes specifying why the result (`Observation.value[x]`) is missing.", - "valueSet": "http://hl7.org/fhir/ValueSet/data-absent-reason" - }, - "mapping": [ - { - "identity": "v2", - "map": "N/A" - }, - { - "identity": "rim", - "map": "value.nullFlavor" - } - ] - }, - { - "id": "Observation.interpretation", - "path": "Observation.interpretation", - "short": "High, low, normal, etc.", - "definition": "A categorical assessment of an observation value. For example, high, low, normal.", - "comment": "Historically used for laboratory results (known as 'abnormal flag' ), its use extends to other use cases where coded interpretations are relevant. Often reported as one or more simple compact codes this element is often placed adjacent to the result value in reports and flow sheets to signal the meaning/normalcy status of the result.", - "requirements": "For some results, particularly numeric results, an interpretation is necessary to fully understand the significance of a result.", - "alias": [ - "Abnormal Flag" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation.interpretation", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationInterpretation" - } - ], - "strength": "extensible", - "description": "Codes identifying interpretations of observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-interpretation" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 260245000 |Findings values|" - }, - { - "identity": "v2", - "map": "OBX-8" - }, - { - "identity": "rim", - "map": "interpretationCode" - }, - { - "identity": "sct-attr", - "map": "363713009 |Has interpretation|" - } - ] - }, - { - "id": "Observation.note", - "path": "Observation.note", - "short": "Comments about the observation", - "definition": "Comments about the observation or the results.", - "comment": "May include general statements about the observation, or statements about significant, unexpected or unreliable results values, or information about its source when relevant to its interpretation.", - "requirements": "Need to be able to provide free text additional information.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.note", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Annotation" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "NTE.3 (partner NTE to OBX, or sometimes another (child?) OBX)" - }, - { - "identity": "rim", - "map": "subjectOf.observationEvent[code=\"annotation\"].value" - } - ] - }, - { - "id": "Observation.bodySite", - "path": "Observation.bodySite", - "short": "Observed body part", - "definition": "Indicates the site on the subject's body where the observation was made (i.e. the target site).", - "comment": "Only used if not implicit in code found in Observation.code. In many systems, this may be represented as a related observation instead of an inline component. \n\nIf the use case requires BodySite to be handled as a separate resource (e.g. to identify and track separately) then use the standard extension[ bodySite](http://hl7.org/fhir/R4/extension-bodysite.html).", - "min": 0, - "max": "1", - "base": { - "path": "Observation.bodySite", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "BodySite" - } - ], - "strength": "example", - "description": "Codes describing anatomical locations. May include laterality.", - "valueSet": "http://hl7.org/fhir/ValueSet/body-site" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 123037004 |Body structure|" - }, - { - "identity": "v2", - "map": "OBX-20" - }, - { - "identity": "rim", - "map": "targetSiteCode" - }, - { - "identity": "sct-attr", - "map": "718497002 |Inherent location|" - } - ] - }, - { - "id": "Observation.method", - "path": "Observation.method", - "short": "How it was done", - "definition": "Indicates the mechanism used to perform the observation.", - "comment": "Only used if not implicit in code for Observation.code.", - "requirements": "In some cases, method can impact results and is thus used for determining whether results can be compared or determining significance of results.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.method", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationMethod" - } - ], - "strength": "example", - "description": "Methods for simple observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-methods" - }, - "mapping": [ - { - "identity": "v2", - "map": "OBX-17" - }, - { - "identity": "rim", - "map": "methodCode" - } - ] - }, - { - "id": "Observation.specimen", - "path": "Observation.specimen", - "short": "Specimen used for this observation", - "definition": "The specimen that was used when this observation was made.", - "comment": "Should only be used if not implicit in code found in `Observation.code`. Observations are not made on specimens themselves; they are made on a subject, but in many cases by the means of a specimen. Note that although specimens are often involved, they are not always tracked and reported explicitly. Also note that observation resources may be used in contexts that track the specimen explicitly (e.g. Diagnostic Report).", - "min": 0, - "max": "1", - "base": { - "path": "Observation.specimen", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Specimen" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 123038009 |Specimen|" - }, - { - "identity": "v2", - "map": "SPM segment" - }, - { - "identity": "rim", - "map": "participation[typeCode=SPC].specimen" - }, - { - "identity": "sct-attr", - "map": "704319004 |Inherent in|" - } - ] - }, - { - "id": "Observation.device", - "path": "Observation.device", - "short": "(Measurement) Device", - "definition": "The device used to generate the observation data.", - "comment": "Note that this is not meant to represent a device involved in the transmission of the result, e.g., a gateway. Such devices may be documented using the Provenance resource where relevant.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.device", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Device", - "http://hl7.org/fhir/StructureDefinition/DeviceMetric" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 49062001 |Device|" - }, - { - "identity": "v2", - "map": "OBX-17 / PRT -10" - }, - { - "identity": "rim", - "map": "participation[typeCode=DEV]" - }, - { - "identity": "sct-attr", - "map": "424226004 |Using device|" - } - ] - }, - { - "id": "Observation.referenceRange", - "path": "Observation.referenceRange", - "short": "Provides guide for interpretation", - "definition": "Guidance on how to interpret the value by comparison to a normal or recommended range. Multiple reference ranges are interpreted as an \"OR\". In other words, to represent two distinct target populations, two `referenceRange` elements would be used.", - "comment": "Most observations only have one generic reference range. Systems MAY choose to restrict to only supplying the relevant reference range based on knowledge about the patient (e.g., specific to the patient's age, gender, weight and other factors), but this might not be possible or appropriate. Whenever more than one reference range is supplied, the differences between them SHOULD be provided in the reference range and/or age properties.", - "requirements": "Knowing what values are considered \"normal\" can help evaluate the significance of a particular result. Need to be able to provide multiple reference ranges for different contexts.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.referenceRange", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "obs-3", - "severity": "error", - "human": "Must have at least a low or a high or text", - "expression": "low.exists() or high.exists() or text.exists()", - "xpath": "(exists(f:low) or exists(f:high)or exists(f:text))", - "source": "http://hl7.org/fhir/StructureDefinition/Observation" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX.7" - }, - { - "identity": "rim", - "map": "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" - } - ] - }, - { - "id": "Observation.referenceRange.id", - "path": "Observation.referenceRange.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.referenceRange.extension", - "path": "Observation.referenceRange.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.referenceRange.modifierExtension", - "path": "Observation.referenceRange.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.referenceRange.low", - "path": "Observation.referenceRange.low", - "short": "Low Range, if relevant", - "definition": "The value of the low bound of the reference range. The low bound of the reference range endpoint is inclusive of the value (e.g. reference range is >=5 - <=9). If the low bound is omitted, it is assumed to be meaningless (e.g. reference range is <=2.3).", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.low", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Quantity", - "profile": [ - "http://hl7.org/fhir/StructureDefinition/SimpleQuantity" - ] - } - ], - "condition": [ - "obs-3" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX-7" - }, - { - "identity": "rim", - "map": "value:IVL_PQ.low" - } - ] - }, - { - "id": "Observation.referenceRange.high", - "path": "Observation.referenceRange.high", - "short": "High Range, if relevant", - "definition": "The value of the high bound of the reference range. The high bound of the reference range endpoint is inclusive of the value (e.g. reference range is >=5 - <=9). If the high bound is omitted, it is assumed to be meaningless (e.g. reference range is >= 2.3).", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.high", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Quantity", - "profile": [ - "http://hl7.org/fhir/StructureDefinition/SimpleQuantity" - ] - } - ], - "condition": [ - "obs-3" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX-7" - }, - { - "identity": "rim", - "map": "value:IVL_PQ.high" - } - ] - }, - { - "id": "Observation.referenceRange.type", - "path": "Observation.referenceRange.type", - "short": "Reference range qualifier", - "definition": "Codes to indicate the what part of the targeted reference population it applies to. For example, the normal or therapeutic range.", - "comment": "This SHOULD be populated if there is more than one range. If this element is not present then the normal range is assumed.", - "requirements": "Need to be able to say what kind of reference range this is - normal, recommended, therapeutic, etc., - for proper interpretation.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.type", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationRangeMeaning" - } - ], - "strength": "preferred", - "description": "Code for the meaning of a reference range.", - "valueSet": "http://hl7.org/fhir/ValueSet/referencerange-meaning" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 260245000 |Findings values| OR \r< 365860008 |General clinical state finding| \rOR \r< 250171008 |Clinical history or observation findings| OR \r< 415229000 |Racial group| OR \r< 365400002 |Finding of puberty stage| OR\r< 443938003 |Procedure carried out on subject|" - }, - { - "identity": "v2", - "map": "OBX-10" - }, - { - "identity": "rim", - "map": "interpretationCode" - } - ] - }, - { - "id": "Observation.referenceRange.appliesTo", - "path": "Observation.referenceRange.appliesTo", - "short": "Reference range population", - "definition": "Codes to indicate the target population this reference range applies to. For example, a reference range may be based on the normal population or a particular sex or race. Multiple `appliesTo` are interpreted as an \"AND\" of the target populations. For example, to represent a target population of African American females, both a code of female and a code for African American would be used.", - "comment": "This SHOULD be populated if there is more than one range. If this element is not present then the normal population is assumed.", - "requirements": "Need to be able to identify the target population for proper interpretation.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.referenceRange.appliesTo", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationRangeType" - } - ], - "strength": "example", - "description": "Codes identifying the population the reference range applies to.", - "valueSet": "http://hl7.org/fhir/ValueSet/referencerange-appliesto" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 260245000 |Findings values| OR \r< 365860008 |General clinical state finding| \rOR \r< 250171008 |Clinical history or observation findings| OR \r< 415229000 |Racial group| OR \r< 365400002 |Finding of puberty stage| OR\r< 443938003 |Procedure carried out on subject|" - }, - { - "identity": "v2", - "map": "OBX-10" - }, - { - "identity": "rim", - "map": "interpretationCode" - } - ] - }, - { - "id": "Observation.referenceRange.age", - "path": "Observation.referenceRange.age", - "short": "Applicable age range, if relevant", - "definition": "The age at which this reference range is applicable. This is a neonatal age (e.g. number of weeks at term) if the meaning says so.", - "requirements": "Some analytes vary greatly over age.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.age", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Range" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "outboundRelationship[typeCode=PRCN].targetObservationCriterion[code=\"age\"].value" - } - ] - }, - { - "id": "Observation.referenceRange.text", - "path": "Observation.referenceRange.text", - "short": "Text based reference range in an observation", - "definition": "Text based reference range in an observation which may be used when a quantitative range is not appropriate for an observation. An example would be a reference value of \"Negative\" or a list or table of \"normals\".", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX-7" - }, - { - "identity": "rim", - "map": "value:ST" - } - ] - }, - { - "id": "Observation.hasMember", - "path": "Observation.hasMember", - "short": "Related resource that belongs to the Observation group", - "definition": "This observation is a group observation (e.g. a battery, a panel of tests, a set of vital sign measurements) that includes the target as a member of the group.", - "comment": "When using this element, an observation will typically have either a value or a set of related resources, although both may be present in some cases. For a discussion on the ways Observations can assembled in groups together, see [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below. Note that a system may calculate results from [QuestionnaireResponse](http://hl7.org/fhir/R4/questionnaireresponse.html) into a final score and represent the score as an Observation.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.hasMember", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Observation", - "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse", - "http://hl7.org/fhir/StructureDefinition/MolecularSequence" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "Relationships established by OBX-4 usage" - }, - { - "identity": "rim", - "map": "outBoundRelationship" - } - ] - }, - { - "id": "Observation.derivedFrom", - "path": "Observation.derivedFrom", - "short": "Related measurements the observation is made from", - "definition": "The target resource that represents a measurement from which this observation value is derived. For example, a calculated anion gap or a fetal measurement based on an ultrasound image.", - "comment": "All the reference choices that are listed in this element can represent clinical observations and other measurements that may be the source for a derived value. The most common reference will be another Observation. For a discussion on the ways Observations can assembled in groups together, see [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.derivedFrom", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/DocumentReference", - "http://hl7.org/fhir/StructureDefinition/ImagingStudy", - "http://hl7.org/fhir/StructureDefinition/Media", - "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse", - "http://hl7.org/fhir/StructureDefinition/Observation", - "http://hl7.org/fhir/StructureDefinition/MolecularSequence" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "Relationships established by OBX-4 usage" - }, - { - "identity": "rim", - "map": ".targetObservation" - } - ] - }, - { - "id": "Observation.component", - "path": "Observation.component", - "short": "Component results", - "definition": "Some observations have multiple component observations. These component observations are expressed as separate code value pairs that share the same attributes. Examples include systolic and diastolic component observations for blood pressure measurement and multiple component observations for genetics observations.", - "comment": "For a discussion on the ways Observations can be assembled in groups together see [Notes](http://hl7.org/fhir/R4/observation.html#notes) below.", - "requirements": "Component observations share the same attributes in the Observation resource as the primary observation and are always treated a part of a single observation (they are not separable). However, the reference range for the primary observation value is not inherited by the component values and is required when appropriate for each component observation.", - "min": 1, - "max": "*", - "base": { - "path": "Observation.component", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "containment by OBX-4?" - }, - { - "identity": "rim", - "map": "outBoundRelationship[typeCode=COMP]" - } - ] - }, - { - "id": "Observation.component.id", - "path": "Observation.component.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.component.extension", - "path": "Observation.component.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.component.modifierExtension", - "path": "Observation.component.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.component.code", - "path": "Observation.component.code", - "short": "Type of component observation (code / type)", - "definition": "Describes what was observed. Sometimes this is called the observation \"code\".", - "comment": "*All* code-value and component.code-component.value pairs need to be taken into account to correctly understand the meaning of the observation.", - "requirements": "Knowing what kind of observation is being made is essential to understanding the observation.", - "min": 1, - "max": "1", - "base": { - "path": "Observation.component.code", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationCode" - } - ], - "strength": "example", - "description": "Codes identifying names of simple observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-codes" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.what[x]" - }, - { - "identity": "sct-concept", - "map": "< 363787002 |Observable entity| OR \r< 386053000 |Evaluation procedure|" - }, - { - "identity": "v2", - "map": "OBX-3" - }, - { - "identity": "rim", - "map": "code" - } - ] - }, - { - "id": "Observation.component.value[x]", - "path": "Observation.component.value[x]", - "short": "Actual component result", - "definition": "The information determined as a result of making the observation, if the information has a simple value.", - "comment": "Used when observation has a set of component observations. An observation may have both a value (e.g. an Apgar score) and component observations (the observations from which the Apgar score was derived). If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", - "requirements": "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.component.value[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Quantity" - }, - { - "code": "CodeableConcept" - }, - { - "code": "string" - }, - { - "code": "boolean" - }, - { - "code": "integer" - }, - { - "code": "Range" - }, - { - "code": "Ratio" - }, - { - "code": "SampledData" - }, - { - "code": "time" - }, - { - "code": "dateTime" - }, - { - "code": "Period" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "sct-concept", - "map": "363714003 |Interprets| < 441742003 |Evaluation finding|" - }, - { - "identity": "v2", - "map": "OBX.2, OBX.5, OBX.6" - }, - { - "identity": "rim", - "map": "value" - }, - { - "identity": "sct-attr", - "map": "363714003 |Interprets|" - } - ] - }, - { - "id": "Observation.component.dataAbsentReason", - "path": "Observation.component.dataAbsentReason", - "short": "Why the component result is missing", - "definition": "Provides a reason why the expected value in the element Observation.component.value[x] is missing.", - "comment": "\"Null\" or exceptional values can be represented two ways in FHIR Observations. One way is to simply include them in the value set and represent the exceptions in the value. For example, measurement values for a serology test could be \"detected\", \"not detected\", \"inconclusive\", or \"test not done\". \n\nThe alternate way is to use the value element for actual observations and use the explicit dataAbsentReason element to record exceptional values. For example, the dataAbsentReason code \"error\" could be used when the measurement was not completed. Because of these options, use-case agreements are required to interpret general observations for exceptional values.", - "requirements": "For many results it is necessary to handle exceptional values in measurements.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.component.dataAbsentReason", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "obs-6" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationValueAbsentReason" - } - ], - "strength": "extensible", - "description": "Codes specifying why the result (`Observation.value[x]`) is missing.", - "valueSet": "http://hl7.org/fhir/ValueSet/data-absent-reason" - }, - "mapping": [ - { - "identity": "v2", - "map": "N/A" - }, - { - "identity": "rim", - "map": "value.nullFlavor" - } - ] - }, - { - "id": "Observation.component.interpretation", - "path": "Observation.component.interpretation", - "short": "High, low, normal, etc.", - "definition": "A categorical assessment of an observation value. For example, high, low, normal.", - "comment": "Historically used for laboratory results (known as 'abnormal flag' ), its use extends to other use cases where coded interpretations are relevant. Often reported as one or more simple compact codes this element is often placed adjacent to the result value in reports and flow sheets to signal the meaning/normalcy status of the result.", - "requirements": "For some results, particularly numeric results, an interpretation is necessary to fully understand the significance of a result.", - "alias": [ - "Abnormal Flag" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation.component.interpretation", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationInterpretation" - } - ], - "strength": "extensible", - "description": "Codes identifying interpretations of observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-interpretation" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 260245000 |Findings values|" - }, - { - "identity": "v2", - "map": "OBX-8" - }, - { - "identity": "rim", - "map": "interpretationCode" - }, - { - "identity": "sct-attr", - "map": "363713009 |Has interpretation|" - } - ] - }, - { - "id": "Observation.component.referenceRange", - "path": "Observation.component.referenceRange", - "short": "Provides guide for interpretation of component result", - "definition": "Guidance on how to interpret the value by comparison to a normal or recommended range.", - "comment": "Most observations only have one generic reference range. Systems MAY choose to restrict to only supplying the relevant reference range based on knowledge about the patient (e.g., specific to the patient's age, gender, weight and other factors), but this might not be possible or appropriate. Whenever more than one reference range is supplied, the differences between them SHOULD be provided in the reference range and/or age properties.", - "requirements": "Knowing what values are considered \"normal\" can help evaluate the significance of a particular result. Need to be able to provide multiple reference ranges for different contexts.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.component.referenceRange", - "min": 0, - "max": "*" - }, - "contentReference": "http://hl7.org/fhir/StructureDefinition/Observation#Observation.referenceRange", - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX.7" - }, - { - "identity": "rim", - "map": "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" - } - ] - } - ] - }, - "differential": { - "element": [ - { - "id": "Observation", - "path": "Observation" - }, - { - "id": "Observation.code.coding", - "path": "Observation.code.coding", - "min": 1 - }, - { - "id": "Observation.component", - "path": "Observation.component", - "min": 1 - } - ] - } +{ + "resourceType" : "StructureDefinition", + "id" : "raw-data-observation", + "text" : { + "status" : "extensions", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-raw-data-observation-definitions.html#Observation\">Observation</a><a name=\"Observation\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observation.html\">Observation</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Measurements and simple assertions</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-raw-data-observation-definitions.html#Observation.code\">code</a><a name=\"Observation.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck100.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-raw-data-observation-definitions.html#Observation.code.coding\">coding</a><a name=\"Observation.code.coding\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Code defined by a terminology system</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-raw-data-observation-definitions.html#Observation.component\">component</a><a name=\"Observation.component\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#BackboneElement\">BackboneElement</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Component results</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" + }, + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", + "valueString" : "Clinical.Diagnostics" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", + "valueCode" : "patient" + }], + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/raw-data-observation", + "version" : "0.2.0", + "name" : "RawDataObservation", + "title" : "Raw Data Observation", + "status" : "active", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "Representation for a row of data from one of the dataset's tables.", + "fhirVersion" : "4.0.1", + "mapping" : [{ + "identity" : "workflow", + "uri" : "http://hl7.org/fhir/workflow", + "name" : "Workflow Pattern" + }, + { + "identity" : "sct-concept", + "uri" : "http://snomed.info/conceptdomain", + "name" : "SNOMED CT Concept Domain Binding" + }, + { + "identity" : "v2", + "uri" : "http://hl7.org/v2", + "name" : "HL7 v2 Mapping" + }, + { + "identity" : "rim", + "uri" : "http://hl7.org/v3", + "name" : "RIM Mapping" + }, + { + "identity" : "w5", + "uri" : "http://hl7.org/fhir/fivews", + "name" : "FiveWs Pattern Mapping" + }, + { + "identity" : "sct-attr", + "uri" : "http://snomed.org/attributebinding", + "name" : "SNOMED CT Attribute Binding" + }], + "kind" : "resource", + "abstract" : false, + "type" : "Observation", + "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/Observation", + "derivation" : "constraint", + "snapshot" : { + "element" : [{ + "id" : "Observation", + "path" : "Observation", + "short" : "Measurements and simple assertions", + "definition" : "Measurements and simple assertions made about a patient, device or other subject.", + "comment" : "Used for simple observations such as device measurements, laboratory atomic results, vital signs, height, weight, smoking status, comments, etc. Other resources are used to provide context for observations such as laboratory reports, etc.", + "alias" : ["Vital Signs", + "Measurement", + "Results", + "Tests"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation", + "min" : 0, + "max" : "*" + }, + "constraint" : [{ + "key" : "dom-2", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL NOT contain nested Resources", + "expression" : "contained.contained.empty()", + "xpath" : "not(parent::f:contained and f:contained)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-3", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", + "expression" : "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", + "xpath" : "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-4", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", + "expression" : "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-5", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a security label", + "expression" : "contained.meta.security.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:security))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", + "valueBoolean" : true + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", + "valueMarkdown" : "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." + }], + "key" : "dom-6", + "severity" : "warning", + "human" : "A resource should have narrative for robust management", + "expression" : "text.`div`.exists()", + "xpath" : "exists(f:text/h:div)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "obs-6", + "severity" : "error", + "human" : "dataAbsentReason SHALL only be present if Observation.value[x] is not present", + "expression" : "dataAbsentReason.empty() or value.empty()", + "xpath" : "not(exists(f:dataAbsentReason)) or (not(exists(*[starts-with(local-name(.), 'value')])))", + "source" : "http://hl7.org/fhir/StructureDefinition/Observation" + }, + { + "key" : "obs-7", + "severity" : "error", + "human" : "If Observation.code is the same as an Observation.component.code then the value element associated with the code SHALL NOT be present", + "expression" : "value.empty() or component.code.where(coding.intersect(%resource.code.coding).exists()).empty()", + "xpath" : "not(f:*[starts-with(local-name(.), 'value')] and (for $coding in f:code/f:coding return f:component/f:code/f:coding[f:code/@value=$coding/f:code/@value] [f:system/@value=$coding/f:system/@value]))", + "source" : "http://hl7.org/fhir/StructureDefinition/Observation" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Entity. Role, or Act" + }, + { + "identity" : "workflow", + "map" : "Event" + }, + { + "identity" : "sct-concept", + "map" : "< 363787002 |Observable entity|" + }, + { + "identity" : "v2", + "map" : "OBX" + }, + { + "identity" : "rim", + "map" : "Observation[classCode=OBS, moodCode=EVN]" + }] + }, + { + "id" : "Observation.id", + "path" : "Observation.id", + "short" : "Logical id of this artifact", + "definition" : "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", + "comment" : "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "id" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "Observation.meta", + "path" : "Observation.meta", + "short" : "Metadata about the resource", + "definition" : "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.meta", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Meta" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "Observation.implicitRules", + "path" : "Observation.implicitRules", + "short" : "A set of rules under which this content was created", + "definition" : "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", + "comment" : "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.implicitRules", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", + "isSummary" : true + }, + { + "id" : "Observation.language", + "path" : "Observation.language", + "short" : "Language of the resource content", + "definition" : "The base language in which the resource is written.", + "comment" : "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.language", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", + "valueCanonical" : "http://hl7.org/fhir/ValueSet/all-languages" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "Language" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "preferred", + "description" : "A human language.", + "valueSet" : "http://hl7.org/fhir/ValueSet/languages" + } + }, + { + "id" : "Observation.text", + "path" : "Observation.text", + "short" : "Text summary of the resource, for human interpretation", + "definition" : "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", + "comment" : "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", + "alias" : ["narrative", + "html", + "xhtml", + "display"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "DomainResource.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Narrative" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Act.text?" + }] + }, + { + "id" : "Observation.contained", + "path" : "Observation.contained", + "short" : "Contained, inline Resources", + "definition" : "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", + "comment" : "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", + "alias" : ["inline resources", + "anonymous resources", + "contained resources"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.contained", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Resource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.extension", + "path" : "Observation.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.modifierExtension", + "path" : "Observation.modifierExtension", + "short" : "Extensions that cannot be ignored", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.identifier", + "path" : "Observation.identifier", + "short" : "Business Identifier for observation", + "definition" : "A unique identifier assigned to this observation.", + "requirements" : "Allows observations to be distinguished and referenced.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.identifier", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Identifier" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.identifier" + }, + { + "identity" : "w5", + "map" : "FiveWs.identifier" + }, + { + "identity" : "v2", + "map" : "OBX.21 For OBX segments from systems without OBX-21 support a combination of ORC/OBR and OBX must be negotiated between trading partners to uniquely identify the OBX segment. Depending on how V2 has been implemented each of these may be an option: 1) OBR-3 + OBX-3 + OBX-4 or 2) OBR-3 + OBR-4 + OBX-3 + OBX-4 or 2) some other way to uniquely ID the OBR/ORC + OBX-3 + OBX-4." + }, + { + "identity" : "rim", + "map" : "id" + }] + }, + { + "id" : "Observation.basedOn", + "path" : "Observation.basedOn", + "short" : "Fulfills plan, proposal or order", + "definition" : "A plan, proposal or order that is fulfilled in whole or in part by this event. For example, a MedicationRequest may require a patient to have laboratory test performed before it is dispensed.", + "requirements" : "Allows tracing of authorization for the event and tracking whether proposals/recommendations were acted upon.", + "alias" : ["Fulfills"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.basedOn", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/CarePlan", + "http://hl7.org/fhir/StructureDefinition/DeviceRequest", + "http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation", + "http://hl7.org/fhir/StructureDefinition/MedicationRequest", + "http://hl7.org/fhir/StructureDefinition/NutritionOrder", + "http://hl7.org/fhir/StructureDefinition/ServiceRequest"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.basedOn" + }, + { + "identity" : "v2", + "map" : "ORC" + }, + { + "identity" : "rim", + "map" : ".inboundRelationship[typeCode=COMP].source[moodCode=EVN]" + }] + }, + { + "id" : "Observation.partOf", + "path" : "Observation.partOf", + "short" : "Part of referenced event", + "definition" : "A larger event of which this particular Observation is a component or step. For example, an observation as part of a procedure.", + "comment" : "To link an Observation to an Encounter use `encounter`. See the [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below for guidance on referencing another Observation.", + "alias" : ["Container"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.partOf", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/MedicationAdministration", + "http://hl7.org/fhir/StructureDefinition/MedicationDispense", + "http://hl7.org/fhir/StructureDefinition/MedicationStatement", + "http://hl7.org/fhir/StructureDefinition/Procedure", + "http://hl7.org/fhir/StructureDefinition/Immunization", + "http://hl7.org/fhir/StructureDefinition/ImagingStudy"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.partOf" + }, + { + "identity" : "v2", + "map" : "Varies by domain" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=FLFS].target" + }] + }, + { + "id" : "Observation.status", + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-display-hint", + "valueString" : "default: final" + }], + "path" : "Observation.status", + "short" : "registered | preliminary | final | amended +", + "definition" : "The status of the result value.", + "comment" : "This element is labeled as a modifier because the status contains codes that mark the resource as not currently valid.", + "requirements" : "Need to track the status of individual results. Some results are finalized before the whole report is finalized.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Observation.status", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid", + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationStatus" + }], + "strength" : "required", + "description" : "Codes providing the status of an observation.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-status|4.0.1" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.status" + }, + { + "identity" : "w5", + "map" : "FiveWs.status" + }, + { + "identity" : "sct-concept", + "map" : "< 445584004 |Report by finality status|" + }, + { + "identity" : "v2", + "map" : "OBX-11" + }, + { + "identity" : "rim", + "map" : "status Amended & Final are differentiated by whether it is the subject of a ControlAct event with a type of \"revise\"" + }] + }, + { + "id" : "Observation.category", + "path" : "Observation.category", + "short" : "Classification of type of observation", + "definition" : "A code that classifies the general type of observation being made.", + "comment" : "In addition to the required category valueset, this element allows various categorization schemes based on the owner’s definition of the category and effectively multiple categories can be used at once. The level of granularity is defined by the category concepts in the value set.", + "requirements" : "Used for filtering what observations are retrieved and displayed.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.category", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationCategory" + }], + "strength" : "preferred", + "description" : "Codes for high level observation categories.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-category" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.class" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=\"COMP].target[classCode=\"LIST\", moodCode=\"EVN\"].code" + }] + }, + { + "id" : "Observation.code", + "path" : "Observation.code", + "short" : "Type of observation (code / type)", + "definition" : "Describes what was observed. Sometimes this is called the observation \"name\".", + "comment" : "*All* code-value and, if present, component.code-component.value pairs need to be taken into account to correctly understand the meaning of the observation.", + "requirements" : "Knowing what kind of observation is being made is essential to understanding the observation.", + "alias" : ["Name"], + "min" : 1, + "max" : "1", + "base" : { + "path" : "Observation.code", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationCode" + }], + "strength" : "example", + "description" : "Codes identifying names of simple observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-codes" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.code" + }, + { + "identity" : "w5", + "map" : "FiveWs.what[x]" + }, + { + "identity" : "sct-concept", + "map" : "< 363787002 |Observable entity| OR < 386053000 |Evaluation procedure|" + }, + { + "identity" : "v2", + "map" : "OBX-3" + }, + { + "identity" : "rim", + "map" : "code" + }, + { + "identity" : "sct-attr", + "map" : "116680003 |Is a|" + }] + }, + { + "id" : "Observation.code.id", + "path" : "Observation.code.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.code.extension", + "path" : "Observation.code.extension", + "slicing" : { + "discriminator" : [{ + "type" : "value", + "path" : "url" + }], + "description" : "Extensions are always sliced by (at least) url", + "rules" : "open" + }, + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.code.coding", + "path" : "Observation.code.coding", + "short" : "Code defined by a terminology system", + "definition" : "A reference to a code defined by a terminology system.", + "comment" : "Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.", + "requirements" : "Allows for alternative encodings within a code system, and translations to other code systems.", + "min" : 1, + "max" : "*", + "base" : { + "path" : "CodeableConcept.coding", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Coding" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "C*E.1-8, C*E.10-22" + }, + { + "identity" : "rim", + "map" : "union(., ./translation)" + }, + { + "identity" : "orim", + "map" : "fhir:CodeableConcept.coding rdfs:subPropertyOf dt:CD.coding" + }] + }, + { + "id" : "Observation.code.text", + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable", + "valueBoolean" : true + }], + "path" : "Observation.code.text", + "short" : "Plain text representation of the concept", + "definition" : "A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user.", + "comment" : "Very often the text is the same as a displayName of one of the codings.", + "requirements" : "The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "CodeableConcept.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "C*E.9. But note many systems use C*E.2 for this" + }, + { + "identity" : "rim", + "map" : "./originalText[mediaType/code=\"text/plain\"]/data" + }, + { + "identity" : "orim", + "map" : "fhir:CodeableConcept.text rdfs:subPropertyOf dt:CD.originalText" + }] + }, + { + "id" : "Observation.subject", + "path" : "Observation.subject", + "short" : "Who and/or what the observation is about", + "definition" : "The patient, or group of patients, location, or device this observation is about and into whose record the observation is placed. If the actual focus of the observation is different from the subject (or a sample of, part, or region of the subject), the `focus` element or the `code` itself specifies the actual focus of the observation.", + "comment" : "One would expect this element to be a cardinality of 1..1. The only circumstance in which the subject can be missing is when the observation is made by a device that does not know the patient. In this case, the observation SHALL be matched to a patient through some context/channel matching technique, and at this point, the observation should be updated.", + "requirements" : "Observations have no value if you don't know who or what they're about.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.subject", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Patient", + "http://hl7.org/fhir/StructureDefinition/Group", + "http://hl7.org/fhir/StructureDefinition/Device", + "http://hl7.org/fhir/StructureDefinition/Location"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.subject" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject[x]" + }, + { + "identity" : "v2", + "map" : "PID-3" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=RTGT]" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject" + }] + }, + { + "id" : "Observation.focus", + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status", + "valueCode" : "trial-use" + }], + "path" : "Observation.focus", + "short" : "What the observation is about, when it is not about the subject of record", + "definition" : "The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.", + "comment" : "Typically, an observation is made about the subject - a patient, or group of patients, location, or device - and the distinction between the subject and what is directly measured for an observation is specified in the observation code itself ( e.g., \"Blood Glucose\") and does not need to be represented separately using this element. Use `specimen` if a reference to a specimen is required. If a code is required instead of a resource use either `bodysite` for bodysites or the standard extension [focusCode](http://hl7.org/fhir/R4/extension-observation-focuscode.html).", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.focus", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Resource"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.subject[x]" + }, + { + "identity" : "v2", + "map" : "OBX-3" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=SBJ]" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject" + }] + }, + { + "id" : "Observation.encounter", + "path" : "Observation.encounter", + "short" : "Healthcare event during which this observation is made", + "definition" : "The healthcare event (e.g. a patient and healthcare provider interaction) during which this observation is made.", + "comment" : "This will typically be the encounter the event occurred within, but some events may be initiated prior to or after the official completion of an encounter but still be tied to the context of the encounter (e.g. pre-admission laboratory tests).", + "requirements" : "For some observations it may be important to know the link between an observation and a particular encounter.", + "alias" : ["Context"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.encounter", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Encounter"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.context" + }, + { + "identity" : "w5", + "map" : "FiveWs.context" + }, + { + "identity" : "v2", + "map" : "PV1" + }, + { + "identity" : "rim", + "map" : "inboundRelationship[typeCode=COMP].source[classCode=ENC, moodCode=EVN]" + }] + }, + { + "id" : "Observation.effective[x]", + "path" : "Observation.effective[x]", + "short" : "Clinically relevant time/time-period for observation", + "definition" : "The time or time-period the observed value is asserted as being true. For biological subjects - e.g. human patients - this is usually called the \"physiologically relevant time\". This is usually either the time of the procedure or of specimen collection, but very often the source of the date/time is not known, only the date/time itself.", + "comment" : "At least a date should be present unless this observation is a historical report. For recording imprecise or \"fuzzy\" times (For example, a blood glucose measurement taken \"after breakfast\") use the [Timing](http://hl7.org/fhir/R4/datatypes.html#timing) datatype which allow the measurement to be tied to regular life events.", + "requirements" : "Knowing when an observation was deemed true is important to its relevance as well as determining trends.", + "alias" : ["Occurrence"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.effective[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "dateTime" + }, + { + "code" : "Period" + }, + { + "code" : "Timing" + }, + { + "code" : "instant" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.occurrence[x]" + }, + { + "identity" : "w5", + "map" : "FiveWs.done[x]" + }, + { + "identity" : "v2", + "map" : "OBX-14, and/or OBX-19 after v2.4 (depends on who observation made)" + }, + { + "identity" : "rim", + "map" : "effectiveTime" + }] + }, + { + "id" : "Observation.issued", + "path" : "Observation.issued", + "short" : "Date/Time this version was made available", + "definition" : "The date and time this version of the observation was made available to providers, typically after the results have been reviewed and verified.", + "comment" : "For Observations that don’t require review and verification, it may be the same as the [`lastUpdated` ](http://hl7.org/fhir/R4/resource-definitions.html#Meta.lastUpdated) time of the resource itself. For Observations that do require review and verification for certain updates, it might not be the same as the `lastUpdated` time of the resource itself due to a non-clinically significant update that doesn’t require the new version to be reviewed and verified again.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.issued", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "instant" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.recorded" + }, + { + "identity" : "v2", + "map" : "OBR.22 (or MSH.7), or perhaps OBX-19 (depends on who observation made)" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=AUT].time" + }] + }, + { + "id" : "Observation.performer", + "path" : "Observation.performer", + "short" : "Who is responsible for the observation", + "definition" : "Who was responsible for asserting the observed value as \"true\".", + "requirements" : "May give a degree of confidence in the observation and also indicates where follow-up questions should be directed.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.performer", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Practitioner", + "http://hl7.org/fhir/StructureDefinition/PractitionerRole", + "http://hl7.org/fhir/StructureDefinition/Organization", + "http://hl7.org/fhir/StructureDefinition/CareTeam", + "http://hl7.org/fhir/StructureDefinition/Patient", + "http://hl7.org/fhir/StructureDefinition/RelatedPerson"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.performer.actor" + }, + { + "identity" : "w5", + "map" : "FiveWs.actor" + }, + { + "identity" : "v2", + "map" : "OBX.15 / (Practitioner) OBX-16, PRT-5:PRT-4='RO' / (Device) OBX-18 , PRT-10:PRT-4='EQUIP' / (Organization) OBX-23, PRT-8:PRT-4='PO'" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=PRF]" + }] + }, + { + "id" : "Observation.value[x]", + "path" : "Observation.value[x]", + "short" : "Actual result", + "definition" : "The information determined as a result of making the observation, if the information has a simple value.", + "comment" : "An observation may have; 1) a single value here, 2) both a value and a set of related or component values, or 3) only a set of related or component values. If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", + "requirements" : "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.value[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Quantity" + }, + { + "code" : "CodeableConcept" + }, + { + "code" : "string" + }, + { + "code" : "boolean" + }, + { + "code" : "integer" + }, + { + "code" : "Range" + }, + { + "code" : "Ratio" + }, + { + "code" : "SampledData" + }, + { + "code" : "time" + }, + { + "code" : "dateTime" + }, + { + "code" : "Period" + }], + "condition" : ["obs-7"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 441742003 |Evaluation finding|" + }, + { + "identity" : "v2", + "map" : "OBX.2, OBX.5, OBX.6" + }, + { + "identity" : "rim", + "map" : "value" + }, + { + "identity" : "sct-attr", + "map" : "363714003 |Interprets|" + }] + }, + { + "id" : "Observation.dataAbsentReason", + "path" : "Observation.dataAbsentReason", + "short" : "Why the result is missing", + "definition" : "Provides a reason why the expected value in the element Observation.value[x] is missing.", + "comment" : "Null or exceptional values can be represented two ways in FHIR Observations. One way is to simply include them in the value set and represent the exceptions in the value. For example, measurement values for a serology test could be \"detected\", \"not detected\", \"inconclusive\", or \"specimen unsatisfactory\". \n\nThe alternate way is to use the value element for actual observations and use the explicit dataAbsentReason element to record exceptional values. For example, the dataAbsentReason code \"error\" could be used when the measurement was not completed. Note that an observation may only be reported if there are values to report. For example differential cell counts values may be reported only when > 0. Because of these options, use-case agreements are required to interpret general observations for null or exceptional values.", + "requirements" : "For many results it is necessary to handle exceptional values in measurements.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.dataAbsentReason", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["obs-6"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationValueAbsentReason" + }], + "strength" : "extensible", + "description" : "Codes specifying why the result (`Observation.value[x]`) is missing.", + "valueSet" : "http://hl7.org/fhir/ValueSet/data-absent-reason" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "N/A" + }, + { + "identity" : "rim", + "map" : "value.nullFlavor" + }] + }, + { + "id" : "Observation.interpretation", + "path" : "Observation.interpretation", + "short" : "High, low, normal, etc.", + "definition" : "A categorical assessment of an observation value. For example, high, low, normal.", + "comment" : "Historically used for laboratory results (known as 'abnormal flag' ), its use extends to other use cases where coded interpretations are relevant. Often reported as one or more simple compact codes this element is often placed adjacent to the result value in reports and flow sheets to signal the meaning/normalcy status of the result.", + "requirements" : "For some results, particularly numeric results, an interpretation is necessary to fully understand the significance of a result.", + "alias" : ["Abnormal Flag"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.interpretation", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationInterpretation" + }], + "strength" : "extensible", + "description" : "Codes identifying interpretations of observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-interpretation" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 260245000 |Findings values|" + }, + { + "identity" : "v2", + "map" : "OBX-8" + }, + { + "identity" : "rim", + "map" : "interpretationCode" + }, + { + "identity" : "sct-attr", + "map" : "363713009 |Has interpretation|" + }] + }, + { + "id" : "Observation.note", + "path" : "Observation.note", + "short" : "Comments about the observation", + "definition" : "Comments about the observation or the results.", + "comment" : "May include general statements about the observation, or statements about significant, unexpected or unreliable results values, or information about its source when relevant to its interpretation.", + "requirements" : "Need to be able to provide free text additional information.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.note", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Annotation" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "NTE.3 (partner NTE to OBX, or sometimes another (child?) OBX)" + }, + { + "identity" : "rim", + "map" : "subjectOf.observationEvent[code=\"annotation\"].value" + }] + }, + { + "id" : "Observation.bodySite", + "path" : "Observation.bodySite", + "short" : "Observed body part", + "definition" : "Indicates the site on the subject's body where the observation was made (i.e. the target site).", + "comment" : "Only used if not implicit in code found in Observation.code. In many systems, this may be represented as a related observation instead of an inline component. \n\nIf the use case requires BodySite to be handled as a separate resource (e.g. to identify and track separately) then use the standard extension[ bodySite](http://hl7.org/fhir/R4/extension-bodysite.html).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.bodySite", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "BodySite" + }], + "strength" : "example", + "description" : "Codes describing anatomical locations. May include laterality.", + "valueSet" : "http://hl7.org/fhir/ValueSet/body-site" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 123037004 |Body structure|" + }, + { + "identity" : "v2", + "map" : "OBX-20" + }, + { + "identity" : "rim", + "map" : "targetSiteCode" + }, + { + "identity" : "sct-attr", + "map" : "718497002 |Inherent location|" + }] + }, + { + "id" : "Observation.method", + "path" : "Observation.method", + "short" : "How it was done", + "definition" : "Indicates the mechanism used to perform the observation.", + "comment" : "Only used if not implicit in code for Observation.code.", + "requirements" : "In some cases, method can impact results and is thus used for determining whether results can be compared or determining significance of results.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.method", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationMethod" + }], + "strength" : "example", + "description" : "Methods for simple observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-methods" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX-17" + }, + { + "identity" : "rim", + "map" : "methodCode" + }] + }, + { + "id" : "Observation.specimen", + "path" : "Observation.specimen", + "short" : "Specimen used for this observation", + "definition" : "The specimen that was used when this observation was made.", + "comment" : "Should only be used if not implicit in code found in `Observation.code`. Observations are not made on specimens themselves; they are made on a subject, but in many cases by the means of a specimen. Note that although specimens are often involved, they are not always tracked and reported explicitly. Also note that observation resources may be used in contexts that track the specimen explicitly (e.g. Diagnostic Report).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.specimen", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Specimen"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 123038009 |Specimen|" + }, + { + "identity" : "v2", + "map" : "SPM segment" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=SPC].specimen" + }, + { + "identity" : "sct-attr", + "map" : "704319004 |Inherent in|" + }] + }, + { + "id" : "Observation.device", + "path" : "Observation.device", + "short" : "(Measurement) Device", + "definition" : "The device used to generate the observation data.", + "comment" : "Note that this is not meant to represent a device involved in the transmission of the result, e.g., a gateway. Such devices may be documented using the Provenance resource where relevant.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.device", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Device", + "http://hl7.org/fhir/StructureDefinition/DeviceMetric"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 49062001 |Device|" + }, + { + "identity" : "v2", + "map" : "OBX-17 / PRT -10" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=DEV]" + }, + { + "identity" : "sct-attr", + "map" : "424226004 |Using device|" + }] + }, + { + "id" : "Observation.referenceRange", + "path" : "Observation.referenceRange", + "short" : "Provides guide for interpretation", + "definition" : "Guidance on how to interpret the value by comparison to a normal or recommended range. Multiple reference ranges are interpreted as an \"OR\". In other words, to represent two distinct target populations, two `referenceRange` elements would be used.", + "comment" : "Most observations only have one generic reference range. Systems MAY choose to restrict to only supplying the relevant reference range based on knowledge about the patient (e.g., specific to the patient's age, gender, weight and other factors), but this might not be possible or appropriate. Whenever more than one reference range is supplied, the differences between them SHOULD be provided in the reference range and/or age properties.", + "requirements" : "Knowing what values are considered \"normal\" can help evaluate the significance of a particular result. Need to be able to provide multiple reference ranges for different contexts.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.referenceRange", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "obs-3", + "severity" : "error", + "human" : "Must have at least a low or a high or text", + "expression" : "low.exists() or high.exists() or text.exists()", + "xpath" : "(exists(f:low) or exists(f:high)or exists(f:text))", + "source" : "http://hl7.org/fhir/StructureDefinition/Observation" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX.7" + }, + { + "identity" : "rim", + "map" : "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" + }] + }, + { + "id" : "Observation.referenceRange.id", + "path" : "Observation.referenceRange.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.referenceRange.extension", + "path" : "Observation.referenceRange.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.referenceRange.modifierExtension", + "path" : "Observation.referenceRange.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.referenceRange.low", + "path" : "Observation.referenceRange.low", + "short" : "Low Range, if relevant", + "definition" : "The value of the low bound of the reference range. The low bound of the reference range endpoint is inclusive of the value (e.g. reference range is >=5 - <=9). If the low bound is omitted, it is assumed to be meaningless (e.g. reference range is <=2.3).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.low", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Quantity", + "profile" : ["http://hl7.org/fhir/StructureDefinition/SimpleQuantity"] + }], + "condition" : ["obs-3"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX-7" + }, + { + "identity" : "rim", + "map" : "value:IVL_PQ.low" + }] + }, + { + "id" : "Observation.referenceRange.high", + "path" : "Observation.referenceRange.high", + "short" : "High Range, if relevant", + "definition" : "The value of the high bound of the reference range. The high bound of the reference range endpoint is inclusive of the value (e.g. reference range is >=5 - <=9). If the high bound is omitted, it is assumed to be meaningless (e.g. reference range is >= 2.3).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.high", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Quantity", + "profile" : ["http://hl7.org/fhir/StructureDefinition/SimpleQuantity"] + }], + "condition" : ["obs-3"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX-7" + }, + { + "identity" : "rim", + "map" : "value:IVL_PQ.high" + }] + }, + { + "id" : "Observation.referenceRange.type", + "path" : "Observation.referenceRange.type", + "short" : "Reference range qualifier", + "definition" : "Codes to indicate the what part of the targeted reference population it applies to. For example, the normal or therapeutic range.", + "comment" : "This SHOULD be populated if there is more than one range. If this element is not present then the normal range is assumed.", + "requirements" : "Need to be able to say what kind of reference range this is - normal, recommended, therapeutic, etc., - for proper interpretation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.type", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationRangeMeaning" + }], + "strength" : "preferred", + "description" : "Code for the meaning of a reference range.", + "valueSet" : "http://hl7.org/fhir/ValueSet/referencerange-meaning" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 260245000 |Findings values| OR \r< 365860008 |General clinical state finding| \rOR \r< 250171008 |Clinical history or observation findings| OR \r< 415229000 |Racial group| OR \r< 365400002 |Finding of puberty stage| OR\r< 443938003 |Procedure carried out on subject|" + }, + { + "identity" : "v2", + "map" : "OBX-10" + }, + { + "identity" : "rim", + "map" : "interpretationCode" + }] + }, + { + "id" : "Observation.referenceRange.appliesTo", + "path" : "Observation.referenceRange.appliesTo", + "short" : "Reference range population", + "definition" : "Codes to indicate the target population this reference range applies to. For example, a reference range may be based on the normal population or a particular sex or race. Multiple `appliesTo` are interpreted as an \"AND\" of the target populations. For example, to represent a target population of African American females, both a code of female and a code for African American would be used.", + "comment" : "This SHOULD be populated if there is more than one range. If this element is not present then the normal population is assumed.", + "requirements" : "Need to be able to identify the target population for proper interpretation.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.referenceRange.appliesTo", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationRangeType" + }], + "strength" : "example", + "description" : "Codes identifying the population the reference range applies to.", + "valueSet" : "http://hl7.org/fhir/ValueSet/referencerange-appliesto" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 260245000 |Findings values| OR \r< 365860008 |General clinical state finding| \rOR \r< 250171008 |Clinical history or observation findings| OR \r< 415229000 |Racial group| OR \r< 365400002 |Finding of puberty stage| OR\r< 443938003 |Procedure carried out on subject|" + }, + { + "identity" : "v2", + "map" : "OBX-10" + }, + { + "identity" : "rim", + "map" : "interpretationCode" + }] + }, + { + "id" : "Observation.referenceRange.age", + "path" : "Observation.referenceRange.age", + "short" : "Applicable age range, if relevant", + "definition" : "The age at which this reference range is applicable. This is a neonatal age (e.g. number of weeks at term) if the meaning says so.", + "requirements" : "Some analytes vary greatly over age.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.age", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Range" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "outboundRelationship[typeCode=PRCN].targetObservationCriterion[code=\"age\"].value" + }] + }, + { + "id" : "Observation.referenceRange.text", + "path" : "Observation.referenceRange.text", + "short" : "Text based reference range in an observation", + "definition" : "Text based reference range in an observation which may be used when a quantitative range is not appropriate for an observation. An example would be a reference value of \"Negative\" or a list or table of \"normals\".", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX-7" + }, + { + "identity" : "rim", + "map" : "value:ST" + }] + }, + { + "id" : "Observation.hasMember", + "path" : "Observation.hasMember", + "short" : "Related resource that belongs to the Observation group", + "definition" : "This observation is a group observation (e.g. a battery, a panel of tests, a set of vital sign measurements) that includes the target as a member of the group.", + "comment" : "When using this element, an observation will typically have either a value or a set of related resources, although both may be present in some cases. For a discussion on the ways Observations can assembled in groups together, see [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below. Note that a system may calculate results from [QuestionnaireResponse](http://hl7.org/fhir/R4/questionnaireresponse.html) into a final score and represent the score as an Observation.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.hasMember", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Observation", + "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse", + "http://hl7.org/fhir/StructureDefinition/MolecularSequence"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "Relationships established by OBX-4 usage" + }, + { + "identity" : "rim", + "map" : "outBoundRelationship" + }] + }, + { + "id" : "Observation.derivedFrom", + "path" : "Observation.derivedFrom", + "short" : "Related measurements the observation is made from", + "definition" : "The target resource that represents a measurement from which this observation value is derived. For example, a calculated anion gap or a fetal measurement based on an ultrasound image.", + "comment" : "All the reference choices that are listed in this element can represent clinical observations and other measurements that may be the source for a derived value. The most common reference will be another Observation. For a discussion on the ways Observations can assembled in groups together, see [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.derivedFrom", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/DocumentReference", + "http://hl7.org/fhir/StructureDefinition/ImagingStudy", + "http://hl7.org/fhir/StructureDefinition/Media", + "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse", + "http://hl7.org/fhir/StructureDefinition/Observation", + "http://hl7.org/fhir/StructureDefinition/MolecularSequence"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "Relationships established by OBX-4 usage" + }, + { + "identity" : "rim", + "map" : ".targetObservation" + }] + }, + { + "id" : "Observation.component", + "path" : "Observation.component", + "short" : "Component results", + "definition" : "Some observations have multiple component observations. These component observations are expressed as separate code value pairs that share the same attributes. Examples include systolic and diastolic component observations for blood pressure measurement and multiple component observations for genetics observations.", + "comment" : "For a discussion on the ways Observations can be assembled in groups together see [Notes](http://hl7.org/fhir/R4/observation.html#notes) below.", + "requirements" : "Component observations share the same attributes in the Observation resource as the primary observation and are always treated a part of a single observation (they are not separable). However, the reference range for the primary observation value is not inherited by the component values and is required when appropriate for each component observation.", + "min" : 1, + "max" : "*", + "base" : { + "path" : "Observation.component", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "containment by OBX-4?" + }, + { + "identity" : "rim", + "map" : "outBoundRelationship[typeCode=COMP]" + }] + }, + { + "id" : "Observation.component.id", + "path" : "Observation.component.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.component.extension", + "path" : "Observation.component.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.component.modifierExtension", + "path" : "Observation.component.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.component.code", + "path" : "Observation.component.code", + "short" : "Type of component observation (code / type)", + "definition" : "Describes what was observed. Sometimes this is called the observation \"code\".", + "comment" : "*All* code-value and component.code-component.value pairs need to be taken into account to correctly understand the meaning of the observation.", + "requirements" : "Knowing what kind of observation is being made is essential to understanding the observation.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Observation.component.code", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationCode" + }], + "strength" : "example", + "description" : "Codes identifying names of simple observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-codes" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.what[x]" + }, + { + "identity" : "sct-concept", + "map" : "< 363787002 |Observable entity| OR \r< 386053000 |Evaluation procedure|" + }, + { + "identity" : "v2", + "map" : "OBX-3" + }, + { + "identity" : "rim", + "map" : "code" + }] + }, + { + "id" : "Observation.component.value[x]", + "path" : "Observation.component.value[x]", + "short" : "Actual component result", + "definition" : "The information determined as a result of making the observation, if the information has a simple value.", + "comment" : "Used when observation has a set of component observations. An observation may have both a value (e.g. an Apgar score) and component observations (the observations from which the Apgar score was derived). If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", + "requirements" : "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.component.value[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Quantity" + }, + { + "code" : "CodeableConcept" + }, + { + "code" : "string" + }, + { + "code" : "boolean" + }, + { + "code" : "integer" + }, + { + "code" : "Range" + }, + { + "code" : "Ratio" + }, + { + "code" : "SampledData" + }, + { + "code" : "time" + }, + { + "code" : "dateTime" + }, + { + "code" : "Period" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "363714003 |Interprets| < 441742003 |Evaluation finding|" + }, + { + "identity" : "v2", + "map" : "OBX.2, OBX.5, OBX.6" + }, + { + "identity" : "rim", + "map" : "value" + }, + { + "identity" : "sct-attr", + "map" : "363714003 |Interprets|" + }] + }, + { + "id" : "Observation.component.dataAbsentReason", + "path" : "Observation.component.dataAbsentReason", + "short" : "Why the component result is missing", + "definition" : "Provides a reason why the expected value in the element Observation.component.value[x] is missing.", + "comment" : "\"Null\" or exceptional values can be represented two ways in FHIR Observations. One way is to simply include them in the value set and represent the exceptions in the value. For example, measurement values for a serology test could be \"detected\", \"not detected\", \"inconclusive\", or \"test not done\". \n\nThe alternate way is to use the value element for actual observations and use the explicit dataAbsentReason element to record exceptional values. For example, the dataAbsentReason code \"error\" could be used when the measurement was not completed. Because of these options, use-case agreements are required to interpret general observations for exceptional values.", + "requirements" : "For many results it is necessary to handle exceptional values in measurements.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.component.dataAbsentReason", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["obs-6"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationValueAbsentReason" + }], + "strength" : "extensible", + "description" : "Codes specifying why the result (`Observation.value[x]`) is missing.", + "valueSet" : "http://hl7.org/fhir/ValueSet/data-absent-reason" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "N/A" + }, + { + "identity" : "rim", + "map" : "value.nullFlavor" + }] + }, + { + "id" : "Observation.component.interpretation", + "path" : "Observation.component.interpretation", + "short" : "High, low, normal, etc.", + "definition" : "A categorical assessment of an observation value. For example, high, low, normal.", + "comment" : "Historically used for laboratory results (known as 'abnormal flag' ), its use extends to other use cases where coded interpretations are relevant. Often reported as one or more simple compact codes this element is often placed adjacent to the result value in reports and flow sheets to signal the meaning/normalcy status of the result.", + "requirements" : "For some results, particularly numeric results, an interpretation is necessary to fully understand the significance of a result.", + "alias" : ["Abnormal Flag"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.component.interpretation", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationInterpretation" + }], + "strength" : "extensible", + "description" : "Codes identifying interpretations of observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-interpretation" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 260245000 |Findings values|" + }, + { + "identity" : "v2", + "map" : "OBX-8" + }, + { + "identity" : "rim", + "map" : "interpretationCode" + }, + { + "identity" : "sct-attr", + "map" : "363713009 |Has interpretation|" + }] + }, + { + "id" : "Observation.component.referenceRange", + "path" : "Observation.component.referenceRange", + "short" : "Provides guide for interpretation of component result", + "definition" : "Guidance on how to interpret the value by comparison to a normal or recommended range.", + "comment" : "Most observations only have one generic reference range. Systems MAY choose to restrict to only supplying the relevant reference range based on knowledge about the patient (e.g., specific to the patient's age, gender, weight and other factors), but this might not be possible or appropriate. Whenever more than one reference range is supplied, the differences between them SHOULD be provided in the reference range and/or age properties.", + "requirements" : "Knowing what values are considered \"normal\" can help evaluate the significance of a particular result. Need to be able to provide multiple reference ranges for different contexts.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.component.referenceRange", + "min" : 0, + "max" : "*" + }, + "contentReference" : "http://hl7.org/fhir/StructureDefinition/Observation#Observation.referenceRange", + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX.7" + }, + { + "identity" : "rim", + "map" : "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" + }] + }] + }, + "differential" : { + "element" : [{ + "id" : "Observation", + "path" : "Observation" + }, + { + "id" : "Observation.code.coding", + "path" : "Observation.code.coding", + "min" : 1 + }, + { + "id" : "Observation.component", + "path" : "Observation.component", + "min" : 1 + }] + } } \ No newline at end of file diff --git a/StructureDefinition-raw-data-observation.profile.history.html b/StructureDefinition-raw-data-observation.profile.history.html index 434cb93f..e363bf17 100644 --- a/StructureDefinition-raw-data-observation.profile.history.html +++ b/StructureDefinition-raw-data-observation.profile.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -288,7 +288,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Change History</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -346,7 +346,7 @@ <h2 id="root">Resource Profile: RawDataObservation - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-raw-data-observation.profile.json.html b/StructureDefinition-raw-data-observation.profile.json.html index 47428604..52e23caf 100644 --- a/StructureDefinition-raw-data-observation.profile.json.html +++ b/StructureDefinition-raw-data-observation.profile.json.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -291,7 +291,7 @@ <h2 id="root">Resource Profile: RawDataObservation - JSON Profile</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -332,7 +332,7 @@ <h2 id="root">Resource Profile: RawDataObservation - JSON Profile</h2> "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a>" : "RawDataObservation", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a>" : "Raw Data Observation", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a>" : "active", - "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>" : [ { @@ -3288,7 +3288,7 @@ <h2 id="root">Resource Profile: RawDataObservation - JSON Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-raw-data-observation.profile.ttl.html b/StructureDefinition-raw-data-observation.profile.ttl.html index ca40146d..701a3a64 100644 --- a/StructureDefinition-raw-data-observation.profile.ttl.html +++ b/StructureDefinition-raw-data-observation.profile.ttl.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -291,7 +291,7 @@ <h2 id="root">Resource Profile: RawDataObservation - TTL Profile</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -319,11 +319,11 @@ <h2 id="root">Resource Profile: RawDataObservation - TTL Profile</h2> a fhir:StructureDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "raw-data-observation"]; + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "raw-data-observation"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description &amp; Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-raw-data-observation-definitions.html#Observation\">Observation</a><a name=\"Observation\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observation.html\">Observation</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Measurements and simple assertions</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-raw-data-observation-definitions.html#Observation.code\">code</a><a name=\"Observation.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck100.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-raw-data-observation-definitions.html#Observation.code.coding\">coding</a><a name=\"Observation.code.coding\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Code defined by a terminology system</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-raw-data-observation-definitions.html#Observation.component\">component</a><a name=\"Observation.component\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#BackboneElement\">BackboneElement</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Component results</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -332,14 +332,14 @@ <h2 id="root">Resource Profile: RawDataObservation - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "patient" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/raw-data-observation"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "RawDataObservation"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Raw Data Observation"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/raw-data-observation"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "RawDataObservation"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Raw Data Observation"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">fhir:StructureDefinition.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -355,9 +355,9 @@ <h2 id="root">Resource Profile: RawDataObservation - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Representation for a row of data from one of the dataset's tables."]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Representation for a row of data from one of the dataset's tables."]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping">fhir:StructureDefinition.mapping</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "workflow" ]; @@ -388,15 +388,15 @@ <h2 id="root">Resource Profile: RawDataObservation - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "sct-attr" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.uri">fhir:StructureDefinition.mapping.uri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://snomed.org/attributebinding" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.name">fhir:StructureDefinition.mapping.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "SNOMED CT Attribute Binding" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Observation"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Observation"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.baseDefinition">fhir:StructureDefinition.baseDefinition</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/Observation"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/Observation> - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot">fhir:StructureDefinition.snapshot</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot.element">fhir:StructureDefinition.snapshot.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2861,7 +2861,7 @@ <h2 id="root">Resource Profile: RawDataObservation - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.identity">fhir:ElementDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "rim" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.map">fhir:ElementDefinition.mapping.map</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" ] ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential">fhir:StructureDefinition.differential</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential.element">fhir:StructureDefinition.differential.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2875,7 +2875,7 @@ <h2 id="root">Resource Profile: RawDataObservation - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.id">fhir:Element.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Observation.component" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.path">fhir:ElementDefinition.path</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Observation.component" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.min">fhir:ElementDefinition.min</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "1"^^xsd:nonNegativeInteger ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -2937,7 +2937,7 @@ <h2 id="root">Resource Profile: RawDataObservation - TTL Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-raw-data-observation.profile.xml.html b/StructureDefinition-raw-data-observation.profile.xml.html index 68ec5291..32a7d658 100644 --- a/StructureDefinition-raw-data-observation.profile.xml.html +++ b/StructureDefinition-raw-data-observation.profile.xml.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -291,7 +291,7 @@ <h2 id="root">Resource Profile: RawDataObservation - XML Profile</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -335,7 +335,7 @@ <h2 id="root">Resource Profile: RawDataObservation - XML Profile</h2> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="RawDataObservation"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Raw Data Observation"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="active"/> - <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -3087,7 +3087,7 @@ <h2 id="root">Resource Profile: RawDataObservation - XML Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-raw-data-observation.ttl b/StructureDefinition-raw-data-observation.ttl index 46b5524d..30e39d79 100644 --- a/StructureDefinition-raw-data-observation.ttl +++ b/StructureDefinition-raw-data-observation.ttl @@ -7,11 +7,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/raw-data-observation> a fhir:StructureDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "raw-data-observation"]; + fhir:Resource.id [ fhir:value "raw-data-observation"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-raw-data-observation-definitions.html#Observation\">Observation</a><a name=\"Observation\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observation.html\">Observation</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Measurements and simple assertions</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-raw-data-observation-definitions.html#Observation.code\">code</a><a name=\"Observation.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck100.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-raw-data-observation-definitions.html#Observation.code.coding\">coding</a><a name=\"Observation.code.coding\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Code defined by a terminology system</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-raw-data-observation-definitions.html#Observation.component\">component</a><a name=\"Observation.component\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#BackboneElement\">BackboneElement</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Component results</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -20,14 +20,14 @@ fhir:index 1; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; fhir:Extension.valueCode [ fhir:value "patient" ] - ]; - fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/raw-data-observation"]; - fhir:StructureDefinition.version [ fhir:value "0.2.0"]; - fhir:StructureDefinition.name [ fhir:value "RawDataObservation"]; - fhir:StructureDefinition.title [ fhir:value "Raw Data Observation"]; - fhir:StructureDefinition.status [ fhir:value "active"]; - fhir:StructureDefinition.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/raw-data-observation"]; # + fhir:StructureDefinition.version [ fhir:value "0.2.0"]; # + fhir:StructureDefinition.name [ fhir:value "RawDataObservation"]; # + fhir:StructureDefinition.title [ fhir:value "Raw Data Observation"]; # + fhir:StructureDefinition.status [ fhir:value "active"]; # + fhir:StructureDefinition.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:StructureDefinition.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -45,9 +45,9 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:StructureDefinition.description [ fhir:value "Representation for a row of data from one of the dataset's tables."]; - fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; + ]; # + fhir:StructureDefinition.description [ fhir:value "Representation for a row of data from one of the dataset's tables."]; # + fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; # fhir:StructureDefinition.mapping [ fhir:index 0; fhir:StructureDefinition.mapping.identity [ fhir:value "workflow" ]; @@ -78,15 +78,15 @@ fhir:StructureDefinition.mapping.identity [ fhir:value "sct-attr" ]; fhir:StructureDefinition.mapping.uri [ fhir:value "http://snomed.org/attributebinding" ]; fhir:StructureDefinition.mapping.name [ fhir:value "SNOMED CT Attribute Binding" ] - ]; - fhir:StructureDefinition.kind [ fhir:value "resource"]; - fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; - fhir:StructureDefinition.type [ fhir:value "Observation"]; + ]; # + fhir:StructureDefinition.kind [ fhir:value "resource"]; # + fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; # + fhir:StructureDefinition.type [ fhir:value "Observation"]; # fhir:StructureDefinition.baseDefinition [ fhir:value "http://hl7.org/fhir/StructureDefinition/Observation"; fhir:link <http://hl7.org/fhir/StructureDefinition/Observation> - ]; - fhir:StructureDefinition.derivation [ fhir:value "constraint"]; + ]; # + fhir:StructureDefinition.derivation [ fhir:value "constraint"]; # fhir:StructureDefinition.snapshot [ fhir:StructureDefinition.snapshot.element [ fhir:index 0; @@ -3126,7 +3126,7 @@ fhir:ElementDefinition.mapping.map [ fhir:value "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" ] ] ] - ]; + ]; # fhir:StructureDefinition.differential [ fhir:StructureDefinition.differential.element [ fhir:index 0; @@ -3143,7 +3143,7 @@ fhir:ElementDefinition.path [ fhir:value "Observation.component" ]; fhir:ElementDefinition.min [ fhir:value "1"^^xsd:nonNegativeInteger ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/StructureDefinition-raw-data-observation.xlsx b/StructureDefinition-raw-data-observation.xlsx index 1b1cd84b..cb4fdda6 100644 Binary files a/StructureDefinition-raw-data-observation.xlsx and b/StructureDefinition-raw-data-observation.xlsx differ diff --git a/StructureDefinition-raw-data-observation.xml b/StructureDefinition-raw-data-observation.xml index a3d02e2a..830ea287 100644 --- a/StructureDefinition-raw-data-observation.xml +++ b/StructureDefinition-raw-data-observation.xml @@ -20,7 +20,7 @@ <name value="RawDataObservation"/> <title value="Raw Data Observation"/> <status value="active"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/StructureDefinition-study-data-dictionary-harmony-definitions.html b/StructureDefinition-study-data-dictionary-harmony-definitions.html index c404902e..ff736de7 100644 --- a/StructureDefinition-study-data-dictionary-harmony-definitions.html +++ b/StructureDefinition-study-data-dictionary-harmony-definitions.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -327,14 +327,16 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio </ul> <a name="tabs-diff"> </a> <div id="tabs-diff"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_ConceptMap"> </a><span style="color: grey">1.</span> <b>ConceptMap</b><a href="#diff_ConceptMap" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> </table> </div> <a name="tabs-key"> </a> <div id="tabs-key"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="key_ConceptMap"> </a><span style="color: grey">1.</span> <b>ConceptMap</b><a href="#key_ConceptMap" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><span style='color:DarkGray'><p>A statement of relationships from one set of concepts to one or more other concepts - either concepts in code systems, or data element/data element concepts, or classes in class models.</p> </span></td></tr> @@ -382,7 +384,8 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio </div> <a name="tabs-snap"> </a> <div id="tabs-snap"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ConceptMap"> </a><span style="color: grey">1.</span> <b>ConceptMap</b><a href="#ConceptMap" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>A statement of relationships from one set of concepts to one or more other concepts - either concepts in code systems, or data element/data element concepts, or classes in class models.</p> </td></tr> @@ -428,7 +431,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#Narrative">Narrative</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrativehtmlxhtmldisplay</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrative, html, xhtml, display</td></tr> <tr><td>Comments</td><td><p>Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a "text blob" or where text is additionally entered raw or narrated and encoded information is added later.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -438,7 +441,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/resource.html">Resource</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resourcesanonymous resourcescontained resources</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resources, anonymous resources, contained resources</td></tr> <tr><td>Comments</td><td><p>This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ConceptMap.extension"> </a><span style="color: grey">8.</span> <b>ConceptMap.extension</b><a href="#ConceptMap.extension" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -446,7 +449,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -460,7 +463,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -622,7 +625,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#markdown">markdown</a></td></tr> <tr><td>Requirements</td><td><p>Consumers must be able to determine any legal restrictions on the use of the concept map and/or its content.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>LicenseRestrictions</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>License, Restrictions</td></tr> <tr><td>Comments</td><td><p>Frequently the copyright differs between the concept map and codes that are included. The copyright statement should clearly differentiate between these when required.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -631,7 +634,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio <tr><td>Definition</td><td><p>Identifier for the source value set that contains the concepts that are being mapped and provides context for the mappings.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td>Choice of: <a href="http://hl7.org/fhir/R4/datatypes.html#uri">uri</a>, <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a>(<a href="http://hl7.org/fhir/R4/valueset.html" title="http://hl7.org/fhir/StructureDefinition/ValueSet">ValueSet</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td>Choice of: <a href="http://hl7.org/fhir/R4/datatypes.html#uri">uri</a>, <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a>(<a href="http://hl7.org/fhir/R4/valueset.html" title="http://hl7.org/fhir/StructureDefinition/ValueSet">ValueSet</a>)</td></tr> <tr><td>[x] Note</td><td>See <a href="http://hl7.org/fhir/R4/formats.html#choice">Choice of Data Types</a> for further information about how to use [x]</td></tr> <tr><td>Comments</td><td><p>Should be a version specific reference. URIs SHOULD be absolute. If there is no source or target value set, there is no specified context for the map (not recommended). The source value set may select codes from either an explicit (standard or local) or implicit code system.</p> </td></tr> @@ -641,7 +644,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio <tr><td>Definition</td><td><p>The target value set provides context for the mappings. Note that the mapping is made between concepts, not between value sets, but the value set provides important context about how the concept mapping choices are made.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td>Choice of: <a href="http://hl7.org/fhir/R4/datatypes.html#uri">uri</a>, <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a>(<a href="http://hl7.org/fhir/R4/valueset.html" title="http://hl7.org/fhir/StructureDefinition/ValueSet">ValueSet</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td>Choice of: <a href="http://hl7.org/fhir/R4/datatypes.html#uri">uri</a>, <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a>(<a href="http://hl7.org/fhir/R4/valueset.html" title="http://hl7.org/fhir/StructureDefinition/ValueSet">ValueSet</a>)</td></tr> <tr><td>[x] Note</td><td>See <a href="http://hl7.org/fhir/R4/formats.html#choice">Choice of Data Types</a> for further information about how to use [x]</td></tr> <tr><td>Comments</td><td><p>Should be a version specific reference. URIs SHOULD be absolute. If there is no source or target value set, the is no specified context for the map.</p> </td></tr> @@ -665,7 +668,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -679,7 +682,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -725,7 +728,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#BackboneElement">BackboneElement</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>codeconceptitem</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>code, concept, item</td></tr> <tr><td>Comments</td><td><p>Generally, the ideal is that there would only be one mapping for each concept in the source value set, but a given concept may be mapped multiple times with different comments or dependencies.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -741,7 +744,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -755,7 +758,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -796,7 +799,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -810,7 +813,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -869,7 +872,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -883,7 +886,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -899,7 +902,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio <tr><td>Definition</td><td><p>An absolute URI that identifies the code system of the dependency code (if the source/dependency is a value set that crosses code systems).</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a>(<a href="http://hl7.org/fhir/R4/codesystem.html" title="http://hl7.org/fhir/StructureDefinition/CodeSystem">CodeSystem</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a>(<a href="http://hl7.org/fhir/R4/codesystem.html" title="http://hl7.org/fhir/StructureDefinition/CodeSystem">CodeSystem</a>)</td></tr> <tr><td>Meaning if Missing</td><td>The code is in the source (dependsOn) or target (product) system</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> @@ -946,7 +949,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -960,7 +963,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -995,7 +998,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio <tr><td>Definition</td><td><p>The canonical reference to an additional ConceptMap resource instance to use for mapping if this ConceptMap resource contains no matching mapping for the source concept.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a>(<a href="http://hl7.org/fhir/R4/conceptmap.html" title="http://hl7.org/fhir/StructureDefinition/ConceptMap">ConceptMap</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a>(<a href="http://hl7.org/fhir/R4/conceptmap.html" title="http://hl7.org/fhir/StructureDefinition/ConceptMap">ConceptMap</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> </table> @@ -1054,7 +1057,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Detailed Descriptio <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-harmony-examples.html b/StructureDefinition-study-data-dictionary-harmony-examples.html index 6a2e23d4..ccc90f1f 100644 --- a/StructureDefinition-study-data-dictionary-harmony-examples.html +++ b/StructureDefinition-study-data-dictionary-harmony-examples.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Examples</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -378,7 +378,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Examples</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-harmony-mappings.html b/StructureDefinition-study-data-dictionary-harmony-mappings.html index 84631ab6..26dd30b6 100644 --- a/StructureDefinition-study-data-dictionary-harmony-mappings.html +++ b/StructureDefinition-study-data-dictionary-harmony-mappings.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Mappings</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -432,7 +432,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Mappings</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-harmony-testing.html b/StructureDefinition-study-data-dictionary-harmony-testing.html index d5cb7c92..6136d345 100644 --- a/StructureDefinition-study-data-dictionary-harmony-testing.html +++ b/StructureDefinition-study-data-dictionary-harmony-testing.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Testing</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -362,7 +362,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Testing</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-harmony.html b/StructureDefinition-study-data-dictionary-harmony.html index 97fcb1af..797995bd 100644 --- a/StructureDefinition-study-data-dictionary-harmony.html +++ b/StructureDefinition-study-data-dictionary-harmony.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -321,7 +321,7 @@ <h2 id="root">Resource Profile: Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -1093,7 +1093,7 @@ <h3>Notes:</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-harmony.json b/StructureDefinition-study-data-dictionary-harmony.json index fc4389f6..ec4be8f3 100644 --- a/StructureDefinition-study-data-dictionary-harmony.json +++ b/StructureDefinition-study-data-dictionary-harmony.json @@ -1,2697 +1,2287 @@ -{ - "resourceType": "StructureDefinition", - "id": "study-data-dictionary-harmony", - "text": { - "status": "extensions", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck0.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-data-dictionary-harmony-definitions.html#ConceptMap\">ConceptMap</a><a name=\"ConceptMap\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/conceptmap.html\">ConceptMap</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">A map from one set of concepts to one or more other concepts</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - }, - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", - "valueString": "Foundation.Terminology" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", - "valueCode": "anonymous" - } - ], - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-harmony", - "version": "0.2.0", - "name": "StudyDataDictionaryHarmony", - "title": "NCPI Data Dictionary Harmony", - "status": "draft", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "Based on the FHIR resource type, ConceptMap, the StudyDataDictionaryHarmony resource provides insight into the transformations made during the ETL from source data into FHIR allowing clients to use the $translate function to discover all of the public codes that were mapped from one of the study's actual vocabulary.", - "fhirVersion": "4.0.1", - "mapping": [ - { - "identity": "rim", - "uri": "http://hl7.org/v3", - "name": "RIM Mapping" - }, - { - "identity": "workflow", - "uri": "http://hl7.org/fhir/workflow", - "name": "Workflow Pattern" - }, - { - "identity": "w5", - "uri": "http://hl7.org/fhir/fivews", - "name": "FiveWs Pattern Mapping" - }, - { - "identity": "objimpl", - "uri": "http://hl7.org/fhir/object-implementation", - "name": "Object Implementation Information" - } - ], - "kind": "resource", - "abstract": false, - "type": "ConceptMap", - "baseDefinition": "http://hl7.org/fhir/StructureDefinition/ConceptMap", - "derivation": "constraint", - "snapshot": { - "element": [ - { - "id": "ConceptMap", - "path": "ConceptMap", - "short": "A map from one set of concepts to one or more other concepts", - "definition": "A statement of relationships from one set of concepts to one or more other concepts - either concepts in code systems, or data element/data element concepts, or classes in class models.", - "min": 0, - "max": "*", - "base": { - "path": "ConceptMap", - "min": 0, - "max": "*" - }, - "constraint": [ - { - "key": "cmd-0", - "severity": "warning", - "human": "Name should be usable as an identifier for the module by machine processing applications such as code generation", - "expression": "name.matches('[A-Z]([A-Za-z0-9_]){0,254}')", - "xpath": "not(exists(f:name/@value)) or matches(f:name/@value, '[A-Z]([A-Za-z0-9_]){0,254}')", - "source": "http://hl7.org/fhir/StructureDefinition/ConceptMap" - }, - { - "key": "dom-2", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL NOT contain nested Resources", - "expression": "contained.contained.empty()", - "xpath": "not(parent::f:contained and f:contained)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-3", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", - "expression": "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", - "xpath": "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-4", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", - "expression": "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-5", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a security label", - "expression": "contained.meta.security.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:security))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", - "valueBoolean": true - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", - "valueMarkdown": "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." - } - ], - "key": "dom-6", - "severity": "warning", - "human": "A resource should have narrative for robust management", - "expression": "text.`div`.exists()", - "xpath": "exists(f:text/h:div)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Entity. Role, or Act" - }, - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ConceptMap.id", - "path": "ConceptMap.id", - "short": "Logical id of this artifact", - "definition": "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", - "comment": "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "id" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "ConceptMap.meta", - "path": "ConceptMap.meta", - "short": "Metadata about the resource", - "definition": "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.meta", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Meta" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "ConceptMap.implicitRules", - "path": "ConceptMap.implicitRules", - "short": "A set of rules under which this content was created", - "definition": "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", - "comment": "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.implicitRules", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", - "isSummary": true - }, - { - "id": "ConceptMap.language", - "path": "ConceptMap.language", - "short": "Language of the resource content", - "definition": "The base language in which the resource is written.", - "comment": "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", - "min": 0, - "max": "1", - "base": { - "path": "Resource.language", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", - "valueCanonical": "http://hl7.org/fhir/ValueSet/all-languages" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "Language" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "preferred", - "description": "A human language.", - "valueSet": "http://hl7.org/fhir/ValueSet/languages" - } - }, - { - "id": "ConceptMap.text", - "path": "ConceptMap.text", - "short": "Text summary of the resource, for human interpretation", - "definition": "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", - "comment": "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", - "alias": [ - "narrative", - "html", - "xhtml", - "display" - ], - "min": 0, - "max": "1", - "base": { - "path": "DomainResource.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Narrative" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Act.text?" - } - ] - }, - { - "id": "ConceptMap.contained", - "path": "ConceptMap.contained", - "short": "Contained, inline Resources", - "definition": "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", - "comment": "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", - "alias": [ - "inline resources", - "anonymous resources", - "contained resources" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.contained", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Resource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ConceptMap.extension", - "path": "ConceptMap.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ConceptMap.modifierExtension", - "path": "ConceptMap.modifierExtension", - "short": "Extensions that cannot be ignored", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ConceptMap.url", - "path": "ConceptMap.url", - "short": "Canonical identifier for this concept map, represented as a URI (globally unique)", - "definition": "An absolute URI that is used to identify this concept map when it is referenced in a specification, model, design or an instance; also called its canonical identifier. This SHOULD be globally unique and SHOULD be a literal address at which at which an authoritative instance of this concept map is (or will be) published. This URL can be the target of a canonical reference. It SHALL remain the same when the concept map is stored on different servers.", - "comment": "Can be a urn:uuid: or a urn:oid: but real http: addresses are preferred. Multiple instances may share the same URL if they have a distinct version.\n\nThe determination of when to create a new version of a resource (same url, new version) vs. defining a new artifact is up to the author. Considerations for making this decision are found in [Technical and Business Versions](http://hl7.org/fhir/R4/resource.html#versions). \n\nIn some cases, the resource can no longer be found at the stated url, but the url itself cannot change. Implementations can use the [meta.source](http://hl7.org/fhir/R4/resource.html#meta) element to indicate where the current master source of the resource can be found.", - "requirements": "Allows the concept map to be referenced by a single globally unique identifier.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.url", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.url" - }, - { - "identity": "w5", - "map": "FiveWs.identifier" - } - ] - }, - { - "id": "ConceptMap.identifier", - "path": "ConceptMap.identifier", - "short": "Additional identifier for the concept map", - "definition": "A formal identifier that is used to identify this concept map when it is represented in other formats, or referenced in a specification, model, design or an instance.", - "comment": "Typically, this is used for identifiers that can go in an HL7 V3 II (instance identifier) data type, and can then identify this concept map outside of FHIR, where it is not possible to use the logical URI.", - "requirements": "Allows externally provided and/or usable business identifiers to be easily associated with the module.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.identifier", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Identifier" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.identifier" - }, - { - "identity": "w5", - "map": "FiveWs.identifier" - }, - { - "identity": "objimpl", - "map": "no-gen-base" - } - ] - }, - { - "id": "ConceptMap.version", - "path": "ConceptMap.version", - "short": "Business version of the concept map", - "definition": "The identifier that is used to identify this version of the concept map when it is referenced in a specification, model, design or instance. This is an arbitrary value managed by the concept map author and is not expected to be globally unique. For example, it might be a timestamp (e.g. yyyymmdd) if a managed version is not available. There is also no expectation that versions can be placed in a lexicographical sequence.", - "comment": "There may be different concept map instances that have the same identifier but different versions. The version can be appended to the url in a reference to allow a reference to a particular business version of the concept map with the format [url]|[version].", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.version", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.version" - }, - { - "identity": "w5", - "map": "FiveWs.version" - } - ] - }, - { - "id": "ConceptMap.name", - "path": "ConceptMap.name", - "short": "Name for this concept map (computer friendly)", - "definition": "A natural language name identifying the concept map. This name should be usable as an identifier for the module by machine processing applications such as code generation.", - "comment": "The name is not expected to be globally unique. The name should be a simple alphanumeric type name to ensure that it is machine-processing friendly.", - "requirements": "Support human navigation and code generation.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.name", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "condition": [ - "inv-0" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "ConceptMap.title", - "path": "ConceptMap.title", - "short": "Name for this concept map (human friendly)", - "definition": "A short, descriptive, user-friendly title for the concept map.", - "comment": "This name does not need to be machine-processing friendly and may contain punctuation, white-space, etc.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.title", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.title" - } - ] - }, - { - "id": "ConceptMap.status", - "path": "ConceptMap.status", - "short": "draft | active | retired | unknown", - "definition": "The status of this concept map. Enables tracking the life-cycle of the content.", - "comment": "Allows filtering of concept maps that are appropriate for use versus not.", - "min": 1, - "max": "1", - "base": { - "path": "ConceptMap.status", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This is labeled as \"Is Modifier\" because applications should not use a retired {{title}} without due consideration", - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "PublicationStatus" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "required", - "description": "The lifecycle status of an artifact.", - "valueSet": "http://hl7.org/fhir/ValueSet/publication-status|4.0.1" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.status" - }, - { - "identity": "w5", - "map": "FiveWs.status" - } - ] - }, - { - "id": "ConceptMap.experimental", - "path": "ConceptMap.experimental", - "short": "For testing purposes, not real usage", - "definition": "A Boolean value to indicate that this concept map is authored for testing purposes (or education/evaluation/marketing) and is not intended to be used for genuine usage.", - "comment": "Allows filtering of concept maps that are appropriate for use versus not.", - "requirements": "Enables experimental content to be developed following the same lifecycle that would be used for a production-level concept map.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.experimental", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "boolean" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.experimental" - }, - { - "identity": "w5", - "map": "FiveWs.class" - } - ] - }, - { - "id": "ConceptMap.date", - "path": "ConceptMap.date", - "short": "Date last changed", - "definition": "The date (and optionally time) when the concept map was published. The date must change when the business version changes and it must change if the status code changes. In addition, it should change when the substantive content of the concept map changes.", - "comment": "Note that this is not the same as the resource last-modified-date, since the resource may be a secondary representation of the concept map. Additional specific dates may be added as extensions or be found by consulting Provenances associated with past versions of the resource.", - "alias": [ - "Revision Date" - ], - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.date", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "dateTime" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.date" - }, - { - "identity": "w5", - "map": "FiveWs.recorded" - } - ] - }, - { - "id": "ConceptMap.publisher", - "path": "ConceptMap.publisher", - "short": "Name of the publisher (organization or individual)", - "definition": "The name of the organization or individual that published the concept map.", - "comment": "Usually an organization but may be an individual. The publisher (or steward) of the concept map is the organization or individual primarily responsible for the maintenance and upkeep of the concept map. This is not necessarily the same individual or organization that developed and initially authored the content. The publisher is the primary point of contact for questions or issues with the concept map. This item SHOULD be populated unless the information is available from context.", - "requirements": "Helps establish the \"authority/credibility\" of the concept map. May also allow for contact.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.publisher", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.publisher" - }, - { - "identity": "w5", - "map": "FiveWs.witness" - } - ] - }, - { - "id": "ConceptMap.contact", - "path": "ConceptMap.contact", - "short": "Contact details for the publisher", - "definition": "Contact details to assist a user in finding and communicating with the publisher.", - "comment": "May be a web site, an email address, a telephone number, etc.", - "min": 0, - "max": "*", - "base": { - "path": "ConceptMap.contact", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "ContactDetail" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.contact" - } - ] - }, - { - "id": "ConceptMap.description", - "path": "ConceptMap.description", - "short": "Natural language description of the concept map", - "definition": "A free text natural language description of the concept map from a consumer's perspective.", - "comment": "The description is not intended to describe the semantics of the concept map. The description should capture its intended use, which is needed for ensuring integrity for its use in models across future changes.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.description", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "markdown" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.description" - }, - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ConceptMap.useContext", - "path": "ConceptMap.useContext", - "short": "The context that the content is intended to support", - "definition": "The content was developed with a focus and intent of supporting the contexts that are listed. These contexts may be general categories (gender, age, ...) or may be references to specific programs (insurance plans, studies, ...) and may be used to assist with indexing and searching for appropriate concept map instances.", - "comment": "When multiple useContexts are specified, there is no expectation that all or any of the contexts apply.", - "requirements": "Assist in searching for appropriate content.", - "min": 0, - "max": "*", - "base": { - "path": "ConceptMap.useContext", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "UsageContext" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.useContext" - } - ] - }, - { - "id": "ConceptMap.jurisdiction", - "path": "ConceptMap.jurisdiction", - "short": "Intended jurisdiction for concept map (if applicable)", - "definition": "A legal or geographic region in which the concept map is intended to be used.", - "comment": "It may be possible for the concept map to be used in jurisdictions other than those for which it was originally designed or intended.", - "min": 0, - "max": "*", - "base": { - "path": "ConceptMap.jurisdiction", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "Jurisdiction" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "extensible", - "description": "Countries and regions within which this artifact is targeted for use.", - "valueSet": "http://hl7.org/fhir/ValueSet/jurisdiction" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.jurisdiction" - } - ] - }, - { - "id": "ConceptMap.purpose", - "path": "ConceptMap.purpose", - "short": "Why this concept map is defined", - "definition": "Explanation of why this concept map is needed and why it has been designed as it has.", - "comment": "This element does not describe the usage of the concept map. Instead, it provides traceability of ''why'' the resource is either needed or ''why'' it is defined as it is. This may be used to point to source materials or specifications that drove the structure of this concept map.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.purpose", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "markdown" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.purpose" - }, - { - "identity": "w5", - "map": "FiveWs.why[x]" - }, - { - "identity": "objimpl", - "map": "no-gen-base" - } - ] - }, - { - "id": "ConceptMap.copyright", - "path": "ConceptMap.copyright", - "short": "Use and/or publishing restrictions", - "definition": "A copyright statement relating to the concept map and/or its contents. Copyright statements are generally legal restrictions on the use and publishing of the concept map.", - "comment": "Frequently the copyright differs between the concept map and codes that are included. The copyright statement should clearly differentiate between these when required.", - "requirements": "Consumers must be able to determine any legal restrictions on the use of the concept map and/or its content.", - "alias": [ - "License", - "Restrictions" - ], - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.copyright", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "markdown" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.copyright" - }, - { - "identity": "objimpl", - "map": "no-gen-base" - } - ] - }, - { - "id": "ConceptMap.source[x]", - "path": "ConceptMap.source[x]", - "short": "The source value set that contains the concepts that are being mapped", - "definition": "Identifier for the source value set that contains the concepts that are being mapped and provides context for the mappings.", - "comment": "Should be a version specific reference. URIs SHOULD be absolute. If there is no source or target value set, there is no specified context for the map (not recommended). The source value set may select codes from either an explicit (standard or local) or implicit code system.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.source[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - }, - { - "code": "canonical", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/ValueSet" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "ConceptMap.target[x]", - "path": "ConceptMap.target[x]", - "short": "The target value set which provides context for the mappings", - "definition": "The target value set provides context for the mappings. Note that the mapping is made between concepts, not between value sets, but the value set provides important context about how the concept mapping choices are made.", - "comment": "Should be a version specific reference. URIs SHOULD be absolute. If there is no source or target value set, the is no specified context for the map.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.target[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - }, - { - "code": "canonical", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/ValueSet" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "ConceptMap.group", - "path": "ConceptMap.group", - "short": "Same source and target systems", - "definition": "A group of mappings that all have the same source and target system.", - "min": 0, - "max": "*", - "base": { - "path": "ConceptMap.group", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.id", - "path": "ConceptMap.group.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ConceptMap.group.extension", - "path": "ConceptMap.group.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ConceptMap.group.modifierExtension", - "path": "ConceptMap.group.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ConceptMap.group.source", - "path": "ConceptMap.group.source", - "short": "Source system where concepts to be mapped are defined", - "definition": "An absolute URI that identifies the source system where the concepts to be mapped are defined.", - "comment": "This is not needed if the source value set is specified and it contains concepts from only a single system.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.group.source", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.sourceVersion", - "path": "ConceptMap.group.sourceVersion", - "short": "Specific version of the code system", - "definition": "The specific version of the code system, as determined by the code system authority.", - "comment": "The specification of a particular code system version may be required for code systems which lack concept permanence.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.group.sourceVersion", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.target", - "path": "ConceptMap.group.target", - "short": "Target system that the concepts are to be mapped to", - "definition": "An absolute URI that identifies the target system that the concepts will be mapped to.", - "comment": "This is not needed if the target value set is specified and it contains concepts from only a single system. The group target may also be omitted if all of the target element equivalence values are 'unmatched'.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.group.target", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.targetVersion", - "path": "ConceptMap.group.targetVersion", - "short": "Specific version of the code system", - "definition": "The specific version of the code system, as determined by the code system authority.", - "comment": "The specification of a particular code system version may be required for code systems which lack concept permanence.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.group.targetVersion", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.element", - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-explicit-type-name", - "valueString": "SourceElement" - } - ], - "path": "ConceptMap.group.element", - "short": "Mappings for a concept from the source set", - "definition": "Mappings for an individual concept in the source to one or more concepts in the target.", - "comment": "Generally, the ideal is that there would only be one mapping for each concept in the source value set, but a given concept may be mapped multiple times with different comments or dependencies.", - "alias": [ - "code", - "concept", - "item" - ], - "min": 1, - "max": "*", - "base": { - "path": "ConceptMap.group.element", - "min": 1, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.element.id", - "path": "ConceptMap.group.element.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ConceptMap.group.element.extension", - "path": "ConceptMap.group.element.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ConceptMap.group.element.modifierExtension", - "path": "ConceptMap.group.element.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ConceptMap.group.element.code", - "path": "ConceptMap.group.element.code", - "short": "Identifies element being mapped", - "definition": "Identity (code or path) or the element/item being mapped.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.group.element.code", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.element.display", - "path": "ConceptMap.group.element.display", - "short": "Display for the code", - "definition": "The display for the code. The display is only provided to help editors when editing the concept map.", - "comment": "The display is ignored when processing the map.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.group.element.display", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.element.target", - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-explicit-type-name", - "valueString": "TargetElement" - } - ], - "path": "ConceptMap.group.element.target", - "short": "Concept in target system for element", - "definition": "A concept from the target value set that this concept maps to.", - "comment": "Ideally there would only be one map, with equal or equivalent mapping. But multiple maps are allowed for several narrower options, or to assert that other concepts are unmatched.", - "min": 0, - "max": "*", - "base": { - "path": "ConceptMap.group.element.target", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "cmd-1", - "severity": "error", - "human": "If the map is narrower or inexact, there SHALL be some comments", - "expression": "comment.exists() or equivalence.empty() or ((equivalence != 'narrower') and (equivalence != 'inexact'))", - "xpath": "exists(f:comment) or not(exists(f:equivalence)) or ((f:equivalence/@value != 'narrower') and (f:equivalence/@value != 'inexact'))", - "source": "http://hl7.org/fhir/StructureDefinition/ConceptMap" - }, - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.element.target.id", - "path": "ConceptMap.group.element.target.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ConceptMap.group.element.target.extension", - "path": "ConceptMap.group.element.target.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ConceptMap.group.element.target.modifierExtension", - "path": "ConceptMap.group.element.target.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ConceptMap.group.element.target.code", - "path": "ConceptMap.group.element.target.code", - "short": "Code that identifies the target element", - "definition": "Identity (code or path) or the element/item that the map refers to.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.group.element.target.code", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.element.target.display", - "path": "ConceptMap.group.element.target.display", - "short": "Display for the code", - "definition": "The display for the code. The display is only provided to help editors when editing the concept map.", - "comment": "The display is ignored when processing the map.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.group.element.target.display", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.element.target.equivalence", - "path": "ConceptMap.group.element.target.equivalence", - "short": "relatedto | equivalent | equal | wider | subsumes | narrower | specializes | inexact | unmatched | disjoint", - "definition": "The equivalence between the source and target concepts (counting for the dependencies and products). The equivalence is read from target to source (e.g. the target is 'wider' than the source).", - "comment": "This element is labeled as a modifier because it may indicate that a target does not apply.", - "min": 1, - "max": "1", - "base": { - "path": "ConceptMap.group.element.target.equivalence", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "Some of the values mean that there is no mapping from the source to the target, particularly 'disjoint', and the mapping cannot be interpreted without knowing this value as it could mean the elements are equivalent, totally mismatched or anything in between", - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ConceptMapEquivalence" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "required", - "description": "The degree of equivalence between concepts.", - "valueSet": "http://hl7.org/fhir/ValueSet/concept-map-equivalence|4.0.1" - } - }, - { - "id": "ConceptMap.group.element.target.comment", - "path": "ConceptMap.group.element.target.comment", - "short": "Description of status/issues in mapping", - "definition": "A description of status/issues in mapping that conveys additional information not represented in the structured data.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.group.element.target.comment", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "condition": [ - "cmd-1" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.element.target.dependsOn", - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-explicit-type-name", - "valueString": "OtherElement" - } - ], - "path": "ConceptMap.group.element.target.dependsOn", - "short": "Other elements required for this mapping (from context)", - "definition": "A set of additional dependencies for this mapping to hold. This mapping is only applicable if the specified element can be resolved, and it has the specified value.", - "min": 0, - "max": "*", - "base": { - "path": "ConceptMap.group.element.target.dependsOn", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.element.target.dependsOn.id", - "path": "ConceptMap.group.element.target.dependsOn.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ConceptMap.group.element.target.dependsOn.extension", - "path": "ConceptMap.group.element.target.dependsOn.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ConceptMap.group.element.target.dependsOn.modifierExtension", - "path": "ConceptMap.group.element.target.dependsOn.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ConceptMap.group.element.target.dependsOn.property", - "path": "ConceptMap.group.element.target.dependsOn.property", - "short": "Reference to property mapping depends on", - "definition": "A reference to an element that holds a coded value that corresponds to a code system property. The idea is that the information model carries an element somewhere that is labeled to correspond with a code system property.", - "min": 1, - "max": "1", - "base": { - "path": "ConceptMap.group.element.target.dependsOn.property", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.element.target.dependsOn.system", - "path": "ConceptMap.group.element.target.dependsOn.system", - "short": "Code System (if necessary)", - "definition": "An absolute URI that identifies the code system of the dependency code (if the source/dependency is a value set that crosses code systems).", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.group.element.target.dependsOn.system", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "canonical", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/CodeSystem" - ] - } - ], - "meaningWhenMissing": "The code is in the source (dependsOn) or target (product) system", - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.element.target.dependsOn.value", - "path": "ConceptMap.group.element.target.dependsOn.value", - "short": "Value of the referenced element", - "definition": "Identity (code or path) or the element/item/ValueSet/text that the map depends on / refers to.", - "min": 1, - "max": "1", - "base": { - "path": "ConceptMap.group.element.target.dependsOn.value", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.element.target.dependsOn.display", - "path": "ConceptMap.group.element.target.dependsOn.display", - "short": "Display for the code (if value is a code)", - "definition": "The display for the code. The display is only provided to help editors when editing the concept map.", - "comment": "The display is ignored when processing the map.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.group.element.target.dependsOn.display", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.element.target.product", - "path": "ConceptMap.group.element.target.product", - "short": "Other concepts that this mapping also produces", - "definition": "A set of additional outcomes from this mapping to other elements. To properly execute this mapping, the specified element must be mapped to some data element or source that is in context. The mapping may still be useful without a place for the additional data elements, but the equivalence cannot be relied on.", - "min": 0, - "max": "*", - "base": { - "path": "ConceptMap.group.element.target.product", - "min": 0, - "max": "*" - }, - "contentReference": "http://hl7.org/fhir/StructureDefinition/ConceptMap#ConceptMap.group.element.target.dependsOn", - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.unmapped", - "path": "ConceptMap.group.unmapped", - "short": "What to do when there is no mapping for the source concept", - "definition": "What to do when there is no mapping for the source concept. \"Unmapped\" does not include codes that are unmatched, and the unmapped element is ignored in a code is specified to have equivalence = unmatched.", - "comment": "This only applies if the source code has a system value that matches the system defined for the group.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.group.unmapped", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "cmd-2", - "severity": "error", - "human": "If the mode is 'fixed', a code must be provided", - "expression": "(mode = 'fixed') implies code.exists()", - "xpath": "(f:mode/@value != 'fixed') or exists(f:code)", - "source": "http://hl7.org/fhir/StructureDefinition/ConceptMap" - }, - { - "key": "cmd-3", - "severity": "error", - "human": "If the mode is 'other-map', a url must be provided", - "expression": "(mode = 'other-map') implies url.exists()", - "xpath": "(f:mode/@value != 'other-map') or exists(f:url)", - "source": "http://hl7.org/fhir/StructureDefinition/ConceptMap" - }, - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.unmapped.id", - "path": "ConceptMap.group.unmapped.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ConceptMap.group.unmapped.extension", - "path": "ConceptMap.group.unmapped.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ConceptMap.group.unmapped.modifierExtension", - "path": "ConceptMap.group.unmapped.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ConceptMap.group.unmapped.mode", - "path": "ConceptMap.group.unmapped.mode", - "short": "provided | fixed | other-map", - "definition": "Defines which action to take if there is no match for the source concept in the target system designated for the group. One of 3 actions are possible: use the unmapped code (this is useful when doing a mapping between versions, and only a few codes have changed), use a fixed code (a default code), or alternatively, a reference to a different concept map can be provided (by canonical URL).", - "min": 1, - "max": "1", - "base": { - "path": "ConceptMap.group.unmapped.mode", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ConceptMapGroupUnmappedMode" - } - ], - "strength": "required", - "description": "Defines which action to take if there is no match in the group.", - "valueSet": "http://hl7.org/fhir/ValueSet/conceptmap-unmapped-mode|4.0.1" - } - }, - { - "id": "ConceptMap.group.unmapped.code", - "path": "ConceptMap.group.unmapped.code", - "short": "Fixed code when mode = fixed", - "definition": "The fixed code to use when the mode = 'fixed' - all unmapped codes are mapped to a single fixed code.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.group.unmapped.code", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.unmapped.display", - "path": "ConceptMap.group.unmapped.display", - "short": "Display for the code", - "definition": "The display for the code. The display is only provided to help editors when editing the concept map.", - "comment": "The display is ignored when processing the map.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.group.unmapped.display", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ConceptMap.group.unmapped.url", - "path": "ConceptMap.group.unmapped.url", - "short": "canonical reference to an additional ConceptMap to use for mapping if the source concept is unmapped", - "definition": "The canonical reference to an additional ConceptMap resource instance to use for mapping if this ConceptMap resource contains no matching mapping for the source concept.", - "min": 0, - "max": "1", - "base": { - "path": "ConceptMap.group.unmapped.url", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "canonical", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/ConceptMap" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - } - ] - }, - "differential": { - "element": [ - { - "id": "ConceptMap", - "path": "ConceptMap" - } - ] - } +{ + "resourceType" : "StructureDefinition", + "id" : "study-data-dictionary-harmony", + "text" : { + "status" : "extensions", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck0.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-data-dictionary-harmony-definitions.html#ConceptMap\">ConceptMap</a><a name=\"ConceptMap\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/conceptmap.html\">ConceptMap</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">A map from one set of concepts to one or more other concepts</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" + }, + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", + "valueString" : "Foundation.Terminology" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", + "valueCode" : "anonymous" + }], + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-harmony", + "version" : "0.2.0", + "name" : "StudyDataDictionaryHarmony", + "title" : "NCPI Data Dictionary Harmony", + "status" : "draft", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "Based on the FHIR resource type, ConceptMap, the StudyDataDictionaryHarmony resource provides insight into the transformations made during the ETL from source data into FHIR allowing clients to use the $translate function to discover all of the public codes that were mapped from one of the study's actual vocabulary.", + "fhirVersion" : "4.0.1", + "mapping" : [{ + "identity" : "rim", + "uri" : "http://hl7.org/v3", + "name" : "RIM Mapping" + }, + { + "identity" : "workflow", + "uri" : "http://hl7.org/fhir/workflow", + "name" : "Workflow Pattern" + }, + { + "identity" : "w5", + "uri" : "http://hl7.org/fhir/fivews", + "name" : "FiveWs Pattern Mapping" + }, + { + "identity" : "objimpl", + "uri" : "http://hl7.org/fhir/object-implementation", + "name" : "Object Implementation Information" + }], + "kind" : "resource", + "abstract" : false, + "type" : "ConceptMap", + "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/ConceptMap", + "derivation" : "constraint", + "snapshot" : { + "element" : [{ + "id" : "ConceptMap", + "path" : "ConceptMap", + "short" : "A map from one set of concepts to one or more other concepts", + "definition" : "A statement of relationships from one set of concepts to one or more other concepts - either concepts in code systems, or data element/data element concepts, or classes in class models.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ConceptMap", + "min" : 0, + "max" : "*" + }, + "constraint" : [{ + "key" : "cmd-0", + "severity" : "warning", + "human" : "Name should be usable as an identifier for the module by machine processing applications such as code generation", + "expression" : "name.matches('[A-Z]([A-Za-z0-9_]){0,254}')", + "xpath" : "not(exists(f:name/@value)) or matches(f:name/@value, '[A-Z]([A-Za-z0-9_]){0,254}')", + "source" : "http://hl7.org/fhir/StructureDefinition/ConceptMap" + }, + { + "key" : "dom-2", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL NOT contain nested Resources", + "expression" : "contained.contained.empty()", + "xpath" : "not(parent::f:contained and f:contained)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-3", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", + "expression" : "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", + "xpath" : "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-4", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", + "expression" : "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-5", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a security label", + "expression" : "contained.meta.security.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:security))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", + "valueBoolean" : true + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", + "valueMarkdown" : "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." + }], + "key" : "dom-6", + "severity" : "warning", + "human" : "A resource should have narrative for robust management", + "expression" : "text.`div`.exists()", + "xpath" : "exists(f:text/h:div)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Entity. Role, or Act" + }, + { + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ConceptMap.id", + "path" : "ConceptMap.id", + "short" : "Logical id of this artifact", + "definition" : "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", + "comment" : "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "id" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "ConceptMap.meta", + "path" : "ConceptMap.meta", + "short" : "Metadata about the resource", + "definition" : "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.meta", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Meta" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "ConceptMap.implicitRules", + "path" : "ConceptMap.implicitRules", + "short" : "A set of rules under which this content was created", + "definition" : "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", + "comment" : "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.implicitRules", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", + "isSummary" : true + }, + { + "id" : "ConceptMap.language", + "path" : "ConceptMap.language", + "short" : "Language of the resource content", + "definition" : "The base language in which the resource is written.", + "comment" : "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.language", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", + "valueCanonical" : "http://hl7.org/fhir/ValueSet/all-languages" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "Language" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "preferred", + "description" : "A human language.", + "valueSet" : "http://hl7.org/fhir/ValueSet/languages" + } + }, + { + "id" : "ConceptMap.text", + "path" : "ConceptMap.text", + "short" : "Text summary of the resource, for human interpretation", + "definition" : "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", + "comment" : "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", + "alias" : ["narrative", + "html", + "xhtml", + "display"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "DomainResource.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Narrative" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Act.text?" + }] + }, + { + "id" : "ConceptMap.contained", + "path" : "ConceptMap.contained", + "short" : "Contained, inline Resources", + "definition" : "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", + "comment" : "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", + "alias" : ["inline resources", + "anonymous resources", + "contained resources"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.contained", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Resource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ConceptMap.extension", + "path" : "ConceptMap.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ConceptMap.modifierExtension", + "path" : "ConceptMap.modifierExtension", + "short" : "Extensions that cannot be ignored", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ConceptMap.url", + "path" : "ConceptMap.url", + "short" : "Canonical identifier for this concept map, represented as a URI (globally unique)", + "definition" : "An absolute URI that is used to identify this concept map when it is referenced in a specification, model, design or an instance; also called its canonical identifier. This SHOULD be globally unique and SHOULD be a literal address at which at which an authoritative instance of this concept map is (or will be) published. This URL can be the target of a canonical reference. It SHALL remain the same when the concept map is stored on different servers.", + "comment" : "Can be a urn:uuid: or a urn:oid: but real http: addresses are preferred. Multiple instances may share the same URL if they have a distinct version.\n\nThe determination of when to create a new version of a resource (same url, new version) vs. defining a new artifact is up to the author. Considerations for making this decision are found in [Technical and Business Versions](http://hl7.org/fhir/R4/resource.html#versions). \n\nIn some cases, the resource can no longer be found at the stated url, but the url itself cannot change. Implementations can use the [meta.source](http://hl7.org/fhir/R4/resource.html#meta) element to indicate where the current master source of the resource can be found.", + "requirements" : "Allows the concept map to be referenced by a single globally unique identifier.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.url", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.url" + }, + { + "identity" : "w5", + "map" : "FiveWs.identifier" + }] + }, + { + "id" : "ConceptMap.identifier", + "path" : "ConceptMap.identifier", + "short" : "Additional identifier for the concept map", + "definition" : "A formal identifier that is used to identify this concept map when it is represented in other formats, or referenced in a specification, model, design or an instance.", + "comment" : "Typically, this is used for identifiers that can go in an HL7 V3 II (instance identifier) data type, and can then identify this concept map outside of FHIR, where it is not possible to use the logical URI.", + "requirements" : "Allows externally provided and/or usable business identifiers to be easily associated with the module.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.identifier", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Identifier" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.identifier" + }, + { + "identity" : "w5", + "map" : "FiveWs.identifier" + }, + { + "identity" : "objimpl", + "map" : "no-gen-base" + }] + }, + { + "id" : "ConceptMap.version", + "path" : "ConceptMap.version", + "short" : "Business version of the concept map", + "definition" : "The identifier that is used to identify this version of the concept map when it is referenced in a specification, model, design or instance. This is an arbitrary value managed by the concept map author and is not expected to be globally unique. For example, it might be a timestamp (e.g. yyyymmdd) if a managed version is not available. There is also no expectation that versions can be placed in a lexicographical sequence.", + "comment" : "There may be different concept map instances that have the same identifier but different versions. The version can be appended to the url in a reference to allow a reference to a particular business version of the concept map with the format [url]|[version].", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.version", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.version" + }, + { + "identity" : "w5", + "map" : "FiveWs.version" + }] + }, + { + "id" : "ConceptMap.name", + "path" : "ConceptMap.name", + "short" : "Name for this concept map (computer friendly)", + "definition" : "A natural language name identifying the concept map. This name should be usable as an identifier for the module by machine processing applications such as code generation.", + "comment" : "The name is not expected to be globally unique. The name should be a simple alphanumeric type name to ensure that it is machine-processing friendly.", + "requirements" : "Support human navigation and code generation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.name", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "condition" : ["inv-0"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "ConceptMap.title", + "path" : "ConceptMap.title", + "short" : "Name for this concept map (human friendly)", + "definition" : "A short, descriptive, user-friendly title for the concept map.", + "comment" : "This name does not need to be machine-processing friendly and may contain punctuation, white-space, etc.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.title", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.title" + }] + }, + { + "id" : "ConceptMap.status", + "path" : "ConceptMap.status", + "short" : "draft | active | retired | unknown", + "definition" : "The status of this concept map. Enables tracking the life-cycle of the content.", + "comment" : "Allows filtering of concept maps that are appropriate for use versus not.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "ConceptMap.status", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This is labeled as \"Is Modifier\" because applications should not use a retired {{title}} without due consideration", + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "PublicationStatus" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "required", + "description" : "The lifecycle status of an artifact.", + "valueSet" : "http://hl7.org/fhir/ValueSet/publication-status|4.0.1" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.status" + }, + { + "identity" : "w5", + "map" : "FiveWs.status" + }] + }, + { + "id" : "ConceptMap.experimental", + "path" : "ConceptMap.experimental", + "short" : "For testing purposes, not real usage", + "definition" : "A Boolean value to indicate that this concept map is authored for testing purposes (or education/evaluation/marketing) and is not intended to be used for genuine usage.", + "comment" : "Allows filtering of concept maps that are appropriate for use versus not.", + "requirements" : "Enables experimental content to be developed following the same lifecycle that would be used for a production-level concept map.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.experimental", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "boolean" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.experimental" + }, + { + "identity" : "w5", + "map" : "FiveWs.class" + }] + }, + { + "id" : "ConceptMap.date", + "path" : "ConceptMap.date", + "short" : "Date last changed", + "definition" : "The date (and optionally time) when the concept map was published. The date must change when the business version changes and it must change if the status code changes. In addition, it should change when the substantive content of the concept map changes.", + "comment" : "Note that this is not the same as the resource last-modified-date, since the resource may be a secondary representation of the concept map. Additional specific dates may be added as extensions or be found by consulting Provenances associated with past versions of the resource.", + "alias" : ["Revision Date"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.date", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "dateTime" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.date" + }, + { + "identity" : "w5", + "map" : "FiveWs.recorded" + }] + }, + { + "id" : "ConceptMap.publisher", + "path" : "ConceptMap.publisher", + "short" : "Name of the publisher (organization or individual)", + "definition" : "The name of the organization or individual that published the concept map.", + "comment" : "Usually an organization but may be an individual. The publisher (or steward) of the concept map is the organization or individual primarily responsible for the maintenance and upkeep of the concept map. This is not necessarily the same individual or organization that developed and initially authored the content. The publisher is the primary point of contact for questions or issues with the concept map. This item SHOULD be populated unless the information is available from context.", + "requirements" : "Helps establish the \"authority/credibility\" of the concept map. May also allow for contact.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.publisher", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.publisher" + }, + { + "identity" : "w5", + "map" : "FiveWs.witness" + }] + }, + { + "id" : "ConceptMap.contact", + "path" : "ConceptMap.contact", + "short" : "Contact details for the publisher", + "definition" : "Contact details to assist a user in finding and communicating with the publisher.", + "comment" : "May be a web site, an email address, a telephone number, etc.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ConceptMap.contact", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "ContactDetail" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.contact" + }] + }, + { + "id" : "ConceptMap.description", + "path" : "ConceptMap.description", + "short" : "Natural language description of the concept map", + "definition" : "A free text natural language description of the concept map from a consumer's perspective.", + "comment" : "The description is not intended to describe the semantics of the concept map. The description should capture its intended use, which is needed for ensuring integrity for its use in models across future changes.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.description", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "markdown" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.description" + }, + { + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ConceptMap.useContext", + "path" : "ConceptMap.useContext", + "short" : "The context that the content is intended to support", + "definition" : "The content was developed with a focus and intent of supporting the contexts that are listed. These contexts may be general categories (gender, age, ...) or may be references to specific programs (insurance plans, studies, ...) and may be used to assist with indexing and searching for appropriate concept map instances.", + "comment" : "When multiple useContexts are specified, there is no expectation that all or any of the contexts apply.", + "requirements" : "Assist in searching for appropriate content.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ConceptMap.useContext", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "UsageContext" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.useContext" + }] + }, + { + "id" : "ConceptMap.jurisdiction", + "path" : "ConceptMap.jurisdiction", + "short" : "Intended jurisdiction for concept map (if applicable)", + "definition" : "A legal or geographic region in which the concept map is intended to be used.", + "comment" : "It may be possible for the concept map to be used in jurisdictions other than those for which it was originally designed or intended.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ConceptMap.jurisdiction", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "Jurisdiction" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "extensible", + "description" : "Countries and regions within which this artifact is targeted for use.", + "valueSet" : "http://hl7.org/fhir/ValueSet/jurisdiction" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.jurisdiction" + }] + }, + { + "id" : "ConceptMap.purpose", + "path" : "ConceptMap.purpose", + "short" : "Why this concept map is defined", + "definition" : "Explanation of why this concept map is needed and why it has been designed as it has.", + "comment" : "This element does not describe the usage of the concept map. Instead, it provides traceability of ''why'' the resource is either needed or ''why'' it is defined as it is. This may be used to point to source materials or specifications that drove the structure of this concept map.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.purpose", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "markdown" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.purpose" + }, + { + "identity" : "w5", + "map" : "FiveWs.why[x]" + }, + { + "identity" : "objimpl", + "map" : "no-gen-base" + }] + }, + { + "id" : "ConceptMap.copyright", + "path" : "ConceptMap.copyright", + "short" : "Use and/or publishing restrictions", + "definition" : "A copyright statement relating to the concept map and/or its contents. Copyright statements are generally legal restrictions on the use and publishing of the concept map.", + "comment" : "Frequently the copyright differs between the concept map and codes that are included. The copyright statement should clearly differentiate between these when required.", + "requirements" : "Consumers must be able to determine any legal restrictions on the use of the concept map and/or its content.", + "alias" : ["License", + "Restrictions"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.copyright", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "markdown" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.copyright" + }, + { + "identity" : "objimpl", + "map" : "no-gen-base" + }] + }, + { + "id" : "ConceptMap.source[x]", + "path" : "ConceptMap.source[x]", + "short" : "The source value set that contains the concepts that are being mapped", + "definition" : "Identifier for the source value set that contains the concepts that are being mapped and provides context for the mappings.", + "comment" : "Should be a version specific reference. URIs SHOULD be absolute. If there is no source or target value set, there is no specified context for the map (not recommended). The source value set may select codes from either an explicit (standard or local) or implicit code system.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.source[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }, + { + "code" : "canonical", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/ValueSet"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "ConceptMap.target[x]", + "path" : "ConceptMap.target[x]", + "short" : "The target value set which provides context for the mappings", + "definition" : "The target value set provides context for the mappings. Note that the mapping is made between concepts, not between value sets, but the value set provides important context about how the concept mapping choices are made.", + "comment" : "Should be a version specific reference. URIs SHOULD be absolute. If there is no source or target value set, the is no specified context for the map.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.target[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }, + { + "code" : "canonical", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/ValueSet"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "ConceptMap.group", + "path" : "ConceptMap.group", + "short" : "Same source and target systems", + "definition" : "A group of mappings that all have the same source and target system.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ConceptMap.group", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.id", + "path" : "ConceptMap.group.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ConceptMap.group.extension", + "path" : "ConceptMap.group.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ConceptMap.group.modifierExtension", + "path" : "ConceptMap.group.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ConceptMap.group.source", + "path" : "ConceptMap.group.source", + "short" : "Source system where concepts to be mapped are defined", + "definition" : "An absolute URI that identifies the source system where the concepts to be mapped are defined.", + "comment" : "This is not needed if the source value set is specified and it contains concepts from only a single system.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.source", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.sourceVersion", + "path" : "ConceptMap.group.sourceVersion", + "short" : "Specific version of the code system", + "definition" : "The specific version of the code system, as determined by the code system authority.", + "comment" : "The specification of a particular code system version may be required for code systems which lack concept permanence.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.sourceVersion", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.target", + "path" : "ConceptMap.group.target", + "short" : "Target system that the concepts are to be mapped to", + "definition" : "An absolute URI that identifies the target system that the concepts will be mapped to.", + "comment" : "This is not needed if the target value set is specified and it contains concepts from only a single system. The group target may also be omitted if all of the target element equivalence values are 'unmatched'.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.target", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.targetVersion", + "path" : "ConceptMap.group.targetVersion", + "short" : "Specific version of the code system", + "definition" : "The specific version of the code system, as determined by the code system authority.", + "comment" : "The specification of a particular code system version may be required for code systems which lack concept permanence.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.targetVersion", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.element", + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-explicit-type-name", + "valueString" : "SourceElement" + }], + "path" : "ConceptMap.group.element", + "short" : "Mappings for a concept from the source set", + "definition" : "Mappings for an individual concept in the source to one or more concepts in the target.", + "comment" : "Generally, the ideal is that there would only be one mapping for each concept in the source value set, but a given concept may be mapped multiple times with different comments or dependencies.", + "alias" : ["code", + "concept", + "item"], + "min" : 1, + "max" : "*", + "base" : { + "path" : "ConceptMap.group.element", + "min" : 1, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.element.id", + "path" : "ConceptMap.group.element.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ConceptMap.group.element.extension", + "path" : "ConceptMap.group.element.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ConceptMap.group.element.modifierExtension", + "path" : "ConceptMap.group.element.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ConceptMap.group.element.code", + "path" : "ConceptMap.group.element.code", + "short" : "Identifies element being mapped", + "definition" : "Identity (code or path) or the element/item being mapped.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.element.code", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.element.display", + "path" : "ConceptMap.group.element.display", + "short" : "Display for the code", + "definition" : "The display for the code. The display is only provided to help editors when editing the concept map.", + "comment" : "The display is ignored when processing the map.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.element.display", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.element.target", + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-explicit-type-name", + "valueString" : "TargetElement" + }], + "path" : "ConceptMap.group.element.target", + "short" : "Concept in target system for element", + "definition" : "A concept from the target value set that this concept maps to.", + "comment" : "Ideally there would only be one map, with equal or equivalent mapping. But multiple maps are allowed for several narrower options, or to assert that other concepts are unmatched.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ConceptMap.group.element.target", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "cmd-1", + "severity" : "error", + "human" : "If the map is narrower or inexact, there SHALL be some comments", + "expression" : "comment.exists() or equivalence.empty() or ((equivalence != 'narrower') and (equivalence != 'inexact'))", + "xpath" : "exists(f:comment) or not(exists(f:equivalence)) or ((f:equivalence/@value != 'narrower') and (f:equivalence/@value != 'inexact'))", + "source" : "http://hl7.org/fhir/StructureDefinition/ConceptMap" + }, + { + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.element.target.id", + "path" : "ConceptMap.group.element.target.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ConceptMap.group.element.target.extension", + "path" : "ConceptMap.group.element.target.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ConceptMap.group.element.target.modifierExtension", + "path" : "ConceptMap.group.element.target.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ConceptMap.group.element.target.code", + "path" : "ConceptMap.group.element.target.code", + "short" : "Code that identifies the target element", + "definition" : "Identity (code or path) or the element/item that the map refers to.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.element.target.code", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.element.target.display", + "path" : "ConceptMap.group.element.target.display", + "short" : "Display for the code", + "definition" : "The display for the code. The display is only provided to help editors when editing the concept map.", + "comment" : "The display is ignored when processing the map.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.element.target.display", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.element.target.equivalence", + "path" : "ConceptMap.group.element.target.equivalence", + "short" : "relatedto | equivalent | equal | wider | subsumes | narrower | specializes | inexact | unmatched | disjoint", + "definition" : "The equivalence between the source and target concepts (counting for the dependencies and products). The equivalence is read from target to source (e.g. the target is 'wider' than the source).", + "comment" : "This element is labeled as a modifier because it may indicate that a target does not apply.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.element.target.equivalence", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "Some of the values mean that there is no mapping from the source to the target, particularly 'disjoint', and the mapping cannot be interpreted without knowing this value as it could mean the elements are equivalent, totally mismatched or anything in between", + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ConceptMapEquivalence" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "required", + "description" : "The degree of equivalence between concepts.", + "valueSet" : "http://hl7.org/fhir/ValueSet/concept-map-equivalence|4.0.1" + } + }, + { + "id" : "ConceptMap.group.element.target.comment", + "path" : "ConceptMap.group.element.target.comment", + "short" : "Description of status/issues in mapping", + "definition" : "A description of status/issues in mapping that conveys additional information not represented in the structured data.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.element.target.comment", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "condition" : ["cmd-1"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.element.target.dependsOn", + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-explicit-type-name", + "valueString" : "OtherElement" + }], + "path" : "ConceptMap.group.element.target.dependsOn", + "short" : "Other elements required for this mapping (from context)", + "definition" : "A set of additional dependencies for this mapping to hold. This mapping is only applicable if the specified element can be resolved, and it has the specified value.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ConceptMap.group.element.target.dependsOn", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.element.target.dependsOn.id", + "path" : "ConceptMap.group.element.target.dependsOn.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ConceptMap.group.element.target.dependsOn.extension", + "path" : "ConceptMap.group.element.target.dependsOn.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ConceptMap.group.element.target.dependsOn.modifierExtension", + "path" : "ConceptMap.group.element.target.dependsOn.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ConceptMap.group.element.target.dependsOn.property", + "path" : "ConceptMap.group.element.target.dependsOn.property", + "short" : "Reference to property mapping depends on", + "definition" : "A reference to an element that holds a coded value that corresponds to a code system property. The idea is that the information model carries an element somewhere that is labeled to correspond with a code system property.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.element.target.dependsOn.property", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.element.target.dependsOn.system", + "path" : "ConceptMap.group.element.target.dependsOn.system", + "short" : "Code System (if necessary)", + "definition" : "An absolute URI that identifies the code system of the dependency code (if the source/dependency is a value set that crosses code systems).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.element.target.dependsOn.system", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "canonical", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/CodeSystem"] + }], + "meaningWhenMissing" : "The code is in the source (dependsOn) or target (product) system", + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.element.target.dependsOn.value", + "path" : "ConceptMap.group.element.target.dependsOn.value", + "short" : "Value of the referenced element", + "definition" : "Identity (code or path) or the element/item/ValueSet/text that the map depends on / refers to.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.element.target.dependsOn.value", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.element.target.dependsOn.display", + "path" : "ConceptMap.group.element.target.dependsOn.display", + "short" : "Display for the code (if value is a code)", + "definition" : "The display for the code. The display is only provided to help editors when editing the concept map.", + "comment" : "The display is ignored when processing the map.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.element.target.dependsOn.display", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.element.target.product", + "path" : "ConceptMap.group.element.target.product", + "short" : "Other concepts that this mapping also produces", + "definition" : "A set of additional outcomes from this mapping to other elements. To properly execute this mapping, the specified element must be mapped to some data element or source that is in context. The mapping may still be useful without a place for the additional data elements, but the equivalence cannot be relied on.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ConceptMap.group.element.target.product", + "min" : 0, + "max" : "*" + }, + "contentReference" : "http://hl7.org/fhir/StructureDefinition/ConceptMap#ConceptMap.group.element.target.dependsOn", + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.unmapped", + "path" : "ConceptMap.group.unmapped", + "short" : "What to do when there is no mapping for the source concept", + "definition" : "What to do when there is no mapping for the source concept. \"Unmapped\" does not include codes that are unmatched, and the unmapped element is ignored in a code is specified to have equivalence = unmatched.", + "comment" : "This only applies if the source code has a system value that matches the system defined for the group.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.unmapped", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "cmd-2", + "severity" : "error", + "human" : "If the mode is 'fixed', a code must be provided", + "expression" : "(mode = 'fixed') implies code.exists()", + "xpath" : "(f:mode/@value != 'fixed') or exists(f:code)", + "source" : "http://hl7.org/fhir/StructureDefinition/ConceptMap" + }, + { + "key" : "cmd-3", + "severity" : "error", + "human" : "If the mode is 'other-map', a url must be provided", + "expression" : "(mode = 'other-map') implies url.exists()", + "xpath" : "(f:mode/@value != 'other-map') or exists(f:url)", + "source" : "http://hl7.org/fhir/StructureDefinition/ConceptMap" + }, + { + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.unmapped.id", + "path" : "ConceptMap.group.unmapped.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ConceptMap.group.unmapped.extension", + "path" : "ConceptMap.group.unmapped.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ConceptMap.group.unmapped.modifierExtension", + "path" : "ConceptMap.group.unmapped.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ConceptMap.group.unmapped.mode", + "path" : "ConceptMap.group.unmapped.mode", + "short" : "provided | fixed | other-map", + "definition" : "Defines which action to take if there is no match for the source concept in the target system designated for the group. One of 3 actions are possible: use the unmapped code (this is useful when doing a mapping between versions, and only a few codes have changed), use a fixed code (a default code), or alternatively, a reference to a different concept map can be provided (by canonical URL).", + "min" : 1, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.unmapped.mode", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ConceptMapGroupUnmappedMode" + }], + "strength" : "required", + "description" : "Defines which action to take if there is no match in the group.", + "valueSet" : "http://hl7.org/fhir/ValueSet/conceptmap-unmapped-mode|4.0.1" + } + }, + { + "id" : "ConceptMap.group.unmapped.code", + "path" : "ConceptMap.group.unmapped.code", + "short" : "Fixed code when mode = fixed", + "definition" : "The fixed code to use when the mode = 'fixed' - all unmapped codes are mapped to a single fixed code.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.unmapped.code", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.unmapped.display", + "path" : "ConceptMap.group.unmapped.display", + "short" : "Display for the code", + "definition" : "The display for the code. The display is only provided to help editors when editing the concept map.", + "comment" : "The display is ignored when processing the map.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.unmapped.display", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ConceptMap.group.unmapped.url", + "path" : "ConceptMap.group.unmapped.url", + "short" : "canonical reference to an additional ConceptMap to use for mapping if the source concept is unmapped", + "definition" : "The canonical reference to an additional ConceptMap resource instance to use for mapping if this ConceptMap resource contains no matching mapping for the source concept.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ConceptMap.group.unmapped.url", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "canonical", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/ConceptMap"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }] + }, + "differential" : { + "element" : [{ + "id" : "ConceptMap", + "path" : "ConceptMap" + }] + } } \ No newline at end of file diff --git a/StructureDefinition-study-data-dictionary-harmony.profile.history.html b/StructureDefinition-study-data-dictionary-harmony.profile.history.html index fdcff424..95a32022 100644 --- a/StructureDefinition-study-data-dictionary-harmony.profile.history.html +++ b/StructureDefinition-study-data-dictionary-harmony.profile.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -298,7 +298,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Change History</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -356,7 +356,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-harmony.profile.json.html b/StructureDefinition-study-data-dictionary-harmony.profile.json.html index 2b7b8dab..96a0c299 100644 --- a/StructureDefinition-study-data-dictionary-harmony.profile.json.html +++ b/StructureDefinition-study-data-dictionary-harmony.profile.json.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - JSON Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -342,7 +342,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - JSON Profile</h2> "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a>" : "StudyDataDictionaryHarmony", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a>" : "NCPI Data Dictionary Harmony", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a>" : "draft", - "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>" : [ { @@ -3070,7 +3070,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - JSON Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-harmony.profile.ttl.html b/StructureDefinition-study-data-dictionary-harmony.profile.ttl.html index ae5643a2..7a7c5b34 100644 --- a/StructureDefinition-study-data-dictionary-harmony.profile.ttl.html +++ b/StructureDefinition-study-data-dictionary-harmony.profile.ttl.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - TTL Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -329,11 +329,11 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - TTL Profile</h2> a fhir:StructureDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "study-data-dictionary-harmony"]; + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "study-data-dictionary-harmony"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description &amp; Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck0.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-data-dictionary-harmony-definitions.html#ConceptMap\">ConceptMap</a><a name=\"ConceptMap\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/conceptmap.html\">ConceptMap</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">A map from one set of concepts to one or more other concepts</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -342,14 +342,14 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "anonymous" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-harmony"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "StudyDataDictionaryHarmony"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI Data Dictionary Harmony"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-harmony"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "StudyDataDictionaryHarmony"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI Data Dictionary Harmony"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">fhir:StructureDefinition.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -365,9 +365,9 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Based on the FHIR resource type, ConceptMap, the StudyDataDictionaryHarmony resource provides insight into the transformations made during the ETL from source data into FHIR allowing clients to use the $translate function to discover all of the public codes that were mapped from one of the study's actual vocabulary."]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Based on the FHIR resource type, ConceptMap, the StudyDataDictionaryHarmony resource provides insight into the transformations made during the ETL from source data into FHIR allowing clients to use the $translate function to discover all of the public codes that were mapped from one of the study's actual vocabulary."]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping">fhir:StructureDefinition.mapping</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "rim" ]; @@ -388,15 +388,15 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "objimpl" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.uri">fhir:StructureDefinition.mapping.uri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/object-implementation" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.name">fhir:StructureDefinition.mapping.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Object Implementation Information" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "ConceptMap"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "ConceptMap"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.baseDefinition">fhir:StructureDefinition.baseDefinition</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/ConceptMap"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/ConceptMap> - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot">fhir:StructureDefinition.snapshot</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot.element">fhir:StructureDefinition.snapshot.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2690,13 +2690,13 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/Element> ] ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.isModifier">fhir:ElementDefinition.isModifier</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.isSummary">fhir:ElementDefinition.isSummary</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential">fhir:StructureDefinition.differential</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential.element">fhir:StructureDefinition.differential.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.id">fhir:Element.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ConceptMap" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.path">fhir:ElementDefinition.path</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ConceptMap" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -2758,7 +2758,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - TTL Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-harmony.profile.xml.html b/StructureDefinition-study-data-dictionary-harmony.profile.xml.html index 11d0e869..2f4b8695 100644 --- a/StructureDefinition-study-data-dictionary-harmony.profile.xml.html +++ b/StructureDefinition-study-data-dictionary-harmony.profile.xml.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - XML Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -342,7 +342,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - XML Profile</h2> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="StudyDataDictionaryHarmony"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI Data Dictionary Harmony"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> - <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -2849,7 +2849,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryHarmony - XML Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-harmony.ttl b/StructureDefinition-study-data-dictionary-harmony.ttl index 537a02ee..a0403930 100644 --- a/StructureDefinition-study-data-dictionary-harmony.ttl +++ b/StructureDefinition-study-data-dictionary-harmony.ttl @@ -7,11 +7,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-harmony> a fhir:StructureDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "study-data-dictionary-harmony"]; + fhir:Resource.id [ fhir:value "study-data-dictionary-harmony"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck0.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-data-dictionary-harmony-definitions.html#ConceptMap\">ConceptMap</a><a name=\"ConceptMap\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/conceptmap.html\">ConceptMap</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">A map from one set of concepts to one or more other concepts</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -20,14 +20,14 @@ fhir:index 1; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; fhir:Extension.valueCode [ fhir:value "anonymous" ] - ]; - fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-harmony"]; - fhir:StructureDefinition.version [ fhir:value "0.2.0"]; - fhir:StructureDefinition.name [ fhir:value "StudyDataDictionaryHarmony"]; - fhir:StructureDefinition.title [ fhir:value "NCPI Data Dictionary Harmony"]; - fhir:StructureDefinition.status [ fhir:value "draft"]; - fhir:StructureDefinition.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-harmony"]; # + fhir:StructureDefinition.version [ fhir:value "0.2.0"]; # + fhir:StructureDefinition.name [ fhir:value "StudyDataDictionaryHarmony"]; # + fhir:StructureDefinition.title [ fhir:value "NCPI Data Dictionary Harmony"]; # + fhir:StructureDefinition.status [ fhir:value "draft"]; # + fhir:StructureDefinition.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:StructureDefinition.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -45,9 +45,9 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:StructureDefinition.description [ fhir:value "Based on the FHIR resource type, ConceptMap, the StudyDataDictionaryHarmony resource provides insight into the transformations made during the ETL from source data into FHIR allowing clients to use the $translate function to discover all of the public codes that were mapped from one of the study's actual vocabulary."]; - fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; + ]; # + fhir:StructureDefinition.description [ fhir:value "Based on the FHIR resource type, ConceptMap, the StudyDataDictionaryHarmony resource provides insight into the transformations made during the ETL from source data into FHIR allowing clients to use the $translate function to discover all of the public codes that were mapped from one of the study's actual vocabulary."]; # + fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; # fhir:StructureDefinition.mapping [ fhir:index 0; fhir:StructureDefinition.mapping.identity [ fhir:value "rim" ]; @@ -68,15 +68,15 @@ fhir:StructureDefinition.mapping.identity [ fhir:value "objimpl" ]; fhir:StructureDefinition.mapping.uri [ fhir:value "http://hl7.org/fhir/object-implementation" ]; fhir:StructureDefinition.mapping.name [ fhir:value "Object Implementation Information" ] - ]; - fhir:StructureDefinition.kind [ fhir:value "resource"]; - fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; - fhir:StructureDefinition.type [ fhir:value "ConceptMap"]; + ]; # + fhir:StructureDefinition.kind [ fhir:value "resource"]; # + fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; # + fhir:StructureDefinition.type [ fhir:value "ConceptMap"]; # fhir:StructureDefinition.baseDefinition [ fhir:value "http://hl7.org/fhir/StructureDefinition/ConceptMap"; fhir:link <http://hl7.org/fhir/StructureDefinition/ConceptMap> - ]; - fhir:StructureDefinition.derivation [ fhir:value "constraint"]; + ]; # + fhir:StructureDefinition.derivation [ fhir:value "constraint"]; # fhir:StructureDefinition.snapshot [ fhir:StructureDefinition.snapshot.element [ fhir:index 0; @@ -2853,14 +2853,14 @@ fhir:ElementDefinition.isModifier [ fhir:value "false"^^xsd:boolean ]; fhir:ElementDefinition.isSummary [ fhir:value "false"^^xsd:boolean ] ] - ]; + ]; # fhir:StructureDefinition.differential [ fhir:StructureDefinition.differential.element [ fhir:index 0; fhir:Element.id [ fhir:value "ConceptMap" ]; fhir:ElementDefinition.path [ fhir:value "ConceptMap" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/StructureDefinition-study-data-dictionary-harmony.xlsx b/StructureDefinition-study-data-dictionary-harmony.xlsx index 09c344a7..e3ed4b13 100644 Binary files a/StructureDefinition-study-data-dictionary-harmony.xlsx and b/StructureDefinition-study-data-dictionary-harmony.xlsx differ diff --git a/StructureDefinition-study-data-dictionary-harmony.xml b/StructureDefinition-study-data-dictionary-harmony.xml index 422ea5d8..9de1fb55 100644 --- a/StructureDefinition-study-data-dictionary-harmony.xml +++ b/StructureDefinition-study-data-dictionary-harmony.xml @@ -17,7 +17,7 @@ <name value="StudyDataDictionaryHarmony"/> <title value="NCPI Data Dictionary Harmony"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/StructureDefinition-study-data-dictionary-table-definitions.html b/StructureDefinition-study-data-dictionary-table-definitions.html index 98226aca..e117ef35 100644 --- a/StructureDefinition-study-data-dictionary-table-definitions.html +++ b/StructureDefinition-study-data-dictionary-table-definitions.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -327,7 +327,8 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions </ul> <a name="tabs-diff"> </a> <div id="tabs-diff"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_ActivityDefinition"> </a><span style="color: grey">1.</span> <b>ActivityDefinition</b><a href="#diff_ActivityDefinition" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_ActivityDefinition.code"> </a><span style="color: grey">2.</span> <b>ActivityDefinition.code</b><a href="#diff_ActivityDefinition.code" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>1</span></td></tr> @@ -336,7 +337,8 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions </div> <a name="tabs-key"> </a> <div id="tabs-key"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="key_ActivityDefinition"> </a><span style="color: grey">1.</span> <b>ActivityDefinition</b><a href="#key_ActivityDefinition" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><span style='color:DarkGray'><p>This resource allows for the definition of some activity to be performed, independent of a particular patient, practitioner, or other performance context.</p> </span></td></tr> @@ -407,7 +409,8 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions </div> <a name="tabs-snap"> </a> <div id="tabs-snap"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ActivityDefinition"> </a><span style="color: grey">1.</span> <b>ActivityDefinition</b><a href="#ActivityDefinition" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>This resource allows for the definition of some activity to be performed, independent of a particular patient, practitioner, or other performance context.</p> </td></tr> @@ -453,7 +456,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#Narrative">Narrative</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrativehtmlxhtmldisplay</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrative, html, xhtml, display</td></tr> <tr><td>Comments</td><td><p>Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a "text blob" or where text is additionally entered raw or narrated and encoded information is added later.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -463,7 +466,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/resource.html">Resource</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resourcesanonymous resourcescontained resources</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resources, anonymous resources, contained resources</td></tr> <tr><td>Comments</td><td><p>This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ActivityDefinition.extension"> </a><span style="color: grey">8.</span> <b>ActivityDefinition.extension</b><a href="#ActivityDefinition.extension" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -471,7 +474,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -485,7 +488,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -583,7 +586,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions <tr><td><a href="http://hl7.org/fhir/R4/terminologies.html">Binding</a></td><td>The codes SHALL be taken from <a href="http://hl7.org/fhir/R4/valueset-subject-type.html">SubjectType</a>; other codes may be used where these codes are not suitable The possible types of subjects for an activity (E.g. Patient, Practitioner, Organization, Location, etc.) </td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td>Choice of: <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept">CodeableConcept</a>, <a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td>Choice of: <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept">CodeableConcept</a>, <a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a>)</td></tr> <tr><td>[x] Note</td><td>See <a href="http://hl7.org/fhir/R4/formats.html#choice">Choice of Data Types</a> for further information about how to use [x]</td></tr> <tr><td>Meaning if Missing</td><td>Patient</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -673,7 +676,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#markdown">markdown</a></td></tr> <tr><td>Requirements</td><td><p>Consumers must be able to determine any legal restrictions on the use of the activity definition and/or its content.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>LicenseRestrictions</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>License, Restrictions</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ActivityDefinition.approvalDate"> </a><span style="color: grey">28.</span> <b>ActivityDefinition.approvalDate</b><a href="#ActivityDefinition.approvalDate" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -762,7 +765,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions <tr><td>Definition</td><td><p>A reference to a Library resource containing any formal logic used by the activity definition.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a>(<a href="http://hl7.org/fhir/R4/library.html" title="http://hl7.org/fhir/StructureDefinition/Library">Library</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a>(<a href="http://hl7.org/fhir/R4/library.html" title="http://hl7.org/fhir/StructureDefinition/Library">Library</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ActivityDefinition.kind"> </a><span style="color: grey">38.</span> <b>ActivityDefinition.kind</b><a href="#ActivityDefinition.kind" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -781,7 +784,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions <tr><td>Definition</td><td><p>A profile to which the target of the activity definition is expected to conform.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a>(<a href="http://hl7.org/fhir/R4/structuredefinition.html" title="http://hl7.org/fhir/StructureDefinition/StructureDefinition">StructureDefinition</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a>(<a href="http://hl7.org/fhir/R4/structuredefinition.html" title="http://hl7.org/fhir/StructureDefinition/StructureDefinition">StructureDefinition</a>)</td></tr> <tr><td>Requirements</td><td><p>Allows profiles to be used to describe the types of activities that can be performed within a workflow, protocol, or order set.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -844,7 +847,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions <tr><td>Definition</td><td><p>Identifies the facility where the activity will occur; e.g. home, hospital, specific clinic, etc.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/location.html" title="http://hl7.org/fhir/StructureDefinition/Location">Location</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/location.html" title="http://hl7.org/fhir/StructureDefinition/Location">Location</a>)</td></tr> <tr><td>Requirements</td><td><p>Helps in planning of activity.</p> </td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>facility</td></tr> @@ -870,7 +873,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -884,7 +887,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -916,7 +919,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions <tr><td><a href="http://hl7.org/fhir/R4/terminologies.html">Binding</a></td><td>For example codes, see <a href="http://hl7.org/fhir/R4/valueset-medication-codes.html">SNOMEDCTMedicationCodes</a> Code describing the type of substance or medication </td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td>Choice of: <a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/medication.html" title="http://hl7.org/fhir/StructureDefinition/Medication">Medication</a><a href="http://hl7.org/fhir/R4/substance.html" title="http://hl7.org/fhir/StructureDefinition/Substance">Substance</a>)), <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept">CodeableConcept</a></td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td>Choice of: <a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/medication.html" title="http://hl7.org/fhir/StructureDefinition/Medication">Medication</a>|<a href="http://hl7.org/fhir/R4/substance.html" title="http://hl7.org/fhir/StructureDefinition/Substance">Substance</a>), <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept">CodeableConcept</a></td></tr> <tr><td>[x] Note</td><td>See <a href="http://hl7.org/fhir/R4/formats.html#choice">Choice of Data Types</a> for further information about how to use [x]</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> @@ -955,7 +958,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions <tr><td>Definition</td><td><p>Defines specimen requirements for the action to be performed, such as required specimens for a lab test.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/specimendefinition.html" title="http://hl7.org/fhir/StructureDefinition/SpecimenDefinition">SpecimenDefinition</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/specimendefinition.html" title="http://hl7.org/fhir/StructureDefinition/SpecimenDefinition">SpecimenDefinition</a>)</td></tr> <tr><td>Requirements</td><td><p>Needed to represent lab order definitions.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -964,7 +967,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions <tr><td>Definition</td><td><p>Defines observation requirements for the action to be performed, such as body weight or surface area.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/observationdefinition.html" title="http://hl7.org/fhir/StructureDefinition/ObservationDefinition">ObservationDefinition</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/observationdefinition.html" title="http://hl7.org/fhir/StructureDefinition/ObservationDefinition">ObservationDefinition</a>)</td></tr> <tr><td>Requirements</td><td><p>Needed to represent observation definitions.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -973,14 +976,14 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions <tr><td>Definition</td><td><p>Defines the observations that are expected to be produced by the action.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/observationdefinition.html" title="http://hl7.org/fhir/StructureDefinition/ObservationDefinition">ObservationDefinition</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/observationdefinition.html" title="http://hl7.org/fhir/StructureDefinition/ObservationDefinition">ObservationDefinition</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ActivityDefinition.transform"> </a><span style="color: grey">59.</span> <b>ActivityDefinition.transform</b><a href="#ActivityDefinition.transform" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>A reference to a StructureMap resource that defines a transform that can be executed to produce the intent resource using the ActivityDefinition instance as the input.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a>(<a href="http://hl7.org/fhir/R4/structuremap.html" title="http://hl7.org/fhir/StructureDefinition/StructureMap">StructureMap</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a>(<a href="http://hl7.org/fhir/R4/structuremap.html" title="http://hl7.org/fhir/StructureDefinition/StructureMap">StructureMap</a>)</td></tr> <tr><td>Comments</td><td><p>Note that if both a transform and dynamic values are specified, the dynamic values will be applied to the result of the transform.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -1005,7 +1008,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -1019,7 +1022,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -1098,7 +1101,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Detailed Descriptions <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-table-examples.html b/StructureDefinition-study-data-dictionary-table-examples.html index 21883442..949318b8 100644 --- a/StructureDefinition-study-data-dictionary-table-examples.html +++ b/StructureDefinition-study-data-dictionary-table-examples.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Examples</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -378,7 +378,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Examples</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-table-mappings.html b/StructureDefinition-study-data-dictionary-table-mappings.html index 859edc6f..b9b2be11 100644 --- a/StructureDefinition-study-data-dictionary-table-mappings.html +++ b/StructureDefinition-study-data-dictionary-table-mappings.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Mappings</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -464,7 +464,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Mappings</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-table-testing.html b/StructureDefinition-study-data-dictionary-table-testing.html index 66799d79..dcc391e4 100644 --- a/StructureDefinition-study-data-dictionary-table-testing.html +++ b/StructureDefinition-study-data-dictionary-table-testing.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Testing</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -362,7 +362,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Testing</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-table.html b/StructureDefinition-study-data-dictionary-table.html index 3b3ea282..a262a8ed 100644 --- a/StructureDefinition-study-data-dictionary-table.html +++ b/StructureDefinition-study-data-dictionary-table.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -321,7 +321,7 @@ <h2 id="root">Resource Profile: Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -1125,7 +1125,7 @@ <h3>Notes:</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-table.json b/StructureDefinition-study-data-dictionary-table.json index 1bbce50d..f482130e 100644 --- a/StructureDefinition-study-data-dictionary-table.json +++ b/StructureDefinition-study-data-dictionary-table.json @@ -1,2894 +1,2442 @@ -{ - "resourceType": "StructureDefinition", - "id": "study-data-dictionary-table", - "text": { - "status": "extensions", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-data-dictionary-table-definitions.html#ActivityDefinition\">ActivityDefinition</a><a name=\"ActivityDefinition\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/activitydefinition.html\">ActivityDefinition</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">The definition of a specific activity to be taken, independent of any particular patient or context</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-data-dictionary-table-definitions.html#ActivityDefinition.code\">code</a><a name=\"ActivityDefinition.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Detail type of activity</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - }, - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", - "valueString": "Specialized.Definitional Artifacts" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", - "valueCode": "anonymous" - } - ], - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-table", - "version": "0.2.0", - "name": "StudyDataDictionaryTable", - "title": "NCPI Study Data Dictionary Data Table", - "status": "draft", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "Aggregates Variable Details associated with a single dataset table that are represented in FHIR as as list of references to StudyDataDictionaryVariables in the *observationResultRequirement* property.", - "fhirVersion": "4.0.1", - "mapping": [ - { - "identity": "workflow", - "uri": "http://hl7.org/fhir/workflow", - "name": "Workflow Pattern" - }, - { - "identity": "rim", - "uri": "http://hl7.org/v3", - "name": "RIM Mapping" - }, - { - "identity": "w5", - "uri": "http://hl7.org/fhir/fivews", - "name": "FiveWs Pattern Mapping" - }, - { - "identity": "objimpl", - "uri": "http://hl7.org/fhir/object-implementation", - "name": "Object Implementation Information" - } - ], - "kind": "resource", - "abstract": false, - "type": "ActivityDefinition", - "baseDefinition": "http://hl7.org/fhir/StructureDefinition/ActivityDefinition", - "derivation": "constraint", - "snapshot": { - "element": [ - { - "id": "ActivityDefinition", - "path": "ActivityDefinition", - "short": "The definition of a specific activity to be taken, independent of any particular patient or context", - "definition": "This resource allows for the definition of some activity to be performed, independent of a particular patient, practitioner, or other performance context.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition", - "min": 0, - "max": "*" - }, - "constraint": [ - { - "key": "adf-0", - "severity": "warning", - "human": "Name should be usable as an identifier for the module by machine processing applications such as code generation", - "expression": "name.matches('[A-Z]([A-Za-z0-9_]){0,254}')", - "xpath": "not(exists(f:name/@value)) or matches(f:name/@value, '[A-Z]([A-Za-z0-9_]){0,254}')", - "source": "http://hl7.org/fhir/StructureDefinition/ActivityDefinition" - }, - { - "key": "dom-2", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL NOT contain nested Resources", - "expression": "contained.contained.empty()", - "xpath": "not(parent::f:contained and f:contained)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-3", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", - "expression": "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", - "xpath": "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-4", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", - "expression": "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-5", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a security label", - "expression": "contained.meta.security.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:security))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", - "valueBoolean": true - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", - "valueMarkdown": "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." - } - ], - "key": "dom-6", - "severity": "warning", - "human": "A resource should have narrative for robust management", - "expression": "text.`div`.exists()", - "xpath": "exists(f:text/h:div)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Entity. Role, or Act" - }, - { - "identity": "workflow", - "map": "Definition" - }, - { - "identity": "rim", - "map": "Act[classCode=ACT; moodCode=DEFN]" - } - ] - }, - { - "id": "ActivityDefinition.id", - "path": "ActivityDefinition.id", - "short": "Logical id of this artifact", - "definition": "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", - "comment": "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "id" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "ActivityDefinition.meta", - "path": "ActivityDefinition.meta", - "short": "Metadata about the resource", - "definition": "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.meta", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Meta" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "ActivityDefinition.implicitRules", - "path": "ActivityDefinition.implicitRules", - "short": "A set of rules under which this content was created", - "definition": "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", - "comment": "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.implicitRules", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", - "isSummary": true - }, - { - "id": "ActivityDefinition.language", - "path": "ActivityDefinition.language", - "short": "Language of the resource content", - "definition": "The base language in which the resource is written.", - "comment": "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", - "min": 0, - "max": "1", - "base": { - "path": "Resource.language", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", - "valueCanonical": "http://hl7.org/fhir/ValueSet/all-languages" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "Language" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "preferred", - "description": "A human language.", - "valueSet": "http://hl7.org/fhir/ValueSet/languages" - } - }, - { - "id": "ActivityDefinition.text", - "path": "ActivityDefinition.text", - "short": "Text summary of the resource, for human interpretation", - "definition": "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", - "comment": "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", - "alias": [ - "narrative", - "html", - "xhtml", - "display" - ], - "min": 0, - "max": "1", - "base": { - "path": "DomainResource.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Narrative" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Act.text?" - } - ] - }, - { - "id": "ActivityDefinition.contained", - "path": "ActivityDefinition.contained", - "short": "Contained, inline Resources", - "definition": "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", - "comment": "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", - "alias": [ - "inline resources", - "anonymous resources", - "contained resources" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.contained", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Resource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ActivityDefinition.extension", - "path": "ActivityDefinition.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ActivityDefinition.modifierExtension", - "path": "ActivityDefinition.modifierExtension", - "short": "Extensions that cannot be ignored", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ActivityDefinition.url", - "path": "ActivityDefinition.url", - "short": "Canonical identifier for this activity definition, represented as a URI (globally unique)", - "definition": "An absolute URI that is used to identify this activity definition when it is referenced in a specification, model, design or an instance; also called its canonical identifier. This SHOULD be globally unique and SHOULD be a literal address at which at which an authoritative instance of this activity definition is (or will be) published. This URL can be the target of a canonical reference. It SHALL remain the same when the activity definition is stored on different servers.", - "comment": "Can be a urn:uuid: or a urn:oid: but real http: addresses are preferred. Multiple instances may share the same URL if they have a distinct version.\n\nThe determination of when to create a new version of a resource (same url, new version) vs. defining a new artifact is up to the author. Considerations for making this decision are found in [Technical and Business Versions](http://hl7.org/fhir/R4/resource.html#versions). \n\nIn some cases, the resource can no longer be found at the stated url, but the url itself cannot change. Implementations can use the [meta.source](http://hl7.org/fhir/R4/resource.html#meta) element to indicate where the current master source of the resource can be found.", - "requirements": "Allows the activity definition to be referenced by a single globally unique identifier.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.url", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.url" - }, - { - "identity": "w5", - "map": "FiveWs.identifier" - }, - { - "identity": "rim", - "map": ".identifier[scope=BUSN;reliability=ISS]" - } - ] - }, - { - "id": "ActivityDefinition.identifier", - "path": "ActivityDefinition.identifier", - "short": "Additional identifier for the activity definition", - "definition": "A formal identifier that is used to identify this activity definition when it is represented in other formats, or referenced in a specification, model, design or an instance.", - "comment": "Typically, this is used for identifiers that can go in an HL7 V3 II (instance identifier) data type, and can then identify this activity definition outside of FHIR, where it is not possible to use the logical URI.", - "requirements": "Allows externally provided and/or usable business identifiers to be easily associated with the module.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition.identifier", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Identifier" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.identifier" - }, - { - "identity": "w5", - "map": "FiveWs.identifier" - }, - { - "identity": "rim", - "map": ".identifier" - }, - { - "identity": "objimpl", - "map": "no-gen-base" - } - ] - }, - { - "id": "ActivityDefinition.version", - "path": "ActivityDefinition.version", - "short": "Business version of the activity definition", - "definition": "The identifier that is used to identify this version of the activity definition when it is referenced in a specification, model, design or instance. This is an arbitrary value managed by the activity definition author and is not expected to be globally unique. For example, it might be a timestamp (e.g. yyyymmdd) if a managed version is not available. There is also no expectation that versions can be placed in a lexicographical sequence. To provide a version consistent with the Decision Support Service specification, use the format Major.Minor.Revision (e.g. 1.0.0). For more information on versioning knowledge assets, refer to the Decision Support Service specification. Note that a version is required for non-experimental active assets.", - "comment": "There may be different activity definition instances that have the same identifier but different versions. The version can be appended to the url in a reference to allow a reference to a particular business version of the activity definition with the format [url]|[version].", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.version", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.version" - }, - { - "identity": "w5", - "map": "FiveWs.version" - }, - { - "identity": "rim", - "map": "N/A (to add?)" - } - ] - }, - { - "id": "ActivityDefinition.name", - "path": "ActivityDefinition.name", - "short": "Name for this activity definition (computer friendly)", - "definition": "A natural language name identifying the activity definition. This name should be usable as an identifier for the module by machine processing applications such as code generation.", - "comment": "The name is not expected to be globally unique. The name should be a simple alphanumeric type name to ensure that it is machine-processing friendly.", - "requirements": "Support human navigation and code generation.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.name", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "condition": [ - "inv-0" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ActivityDefinition.title", - "path": "ActivityDefinition.title", - "short": "Name for this activity definition (human friendly)", - "definition": "A short, descriptive, user-friendly title for the activity definition.", - "comment": "This name does not need to be machine-processing friendly and may contain punctuation, white-space, etc.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.title", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.title" - }, - { - "identity": "rim", - "map": ".title" - } - ] - }, - { - "id": "ActivityDefinition.subtitle", - "path": "ActivityDefinition.subtitle", - "short": "Subordinate title of the activity definition", - "definition": "An explanatory or alternate title for the activity definition giving additional information about its content.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.subtitle", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ActivityDefinition.status", - "path": "ActivityDefinition.status", - "short": "draft | active | retired | unknown", - "definition": "The status of this activity definition. Enables tracking the life-cycle of the content.", - "comment": "Allows filtering of activity definitions that are appropriate for use versus not.", - "min": 1, - "max": "1", - "base": { - "path": "ActivityDefinition.status", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This is labeled as \"Is Modifier\" because applications should not use a retired {{title}} without due consideration", - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "PublicationStatus" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "required", - "description": "The lifecycle status of an artifact.", - "valueSet": "http://hl7.org/fhir/ValueSet/publication-status|4.0.1" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.status {different ValueSet}" - }, - { - "identity": "w5", - "map": "FiveWs.status" - }, - { - "identity": "rim", - "map": ".status" - } - ] - }, - { - "id": "ActivityDefinition.experimental", - "path": "ActivityDefinition.experimental", - "short": "For testing purposes, not real usage", - "definition": "A Boolean value to indicate that this activity definition is authored for testing purposes (or education/evaluation/marketing) and is not intended to be used for genuine usage.", - "comment": "Allows filtering of activity definitions that are appropriate for use versus not.", - "requirements": "Enables experimental content to be developed following the same lifecycle that would be used for a production-level activity definition.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.experimental", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "boolean" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.experimental" - }, - { - "identity": "w5", - "map": "FiveWs.class" - }, - { - "identity": "rim", - "map": "N/A (to add?)" - } - ] - }, - { - "id": "ActivityDefinition.subject[x]", - "path": "ActivityDefinition.subject[x]", - "short": "Type of individual the activity definition is intended for", - "definition": "A code or group definition that describes the intended subject of the activity being defined.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.subject[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - }, - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Group" - ] - } - ], - "meaningWhenMissing": "Patient", - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "SubjectType" - } - ], - "strength": "extensible", - "description": "The possible types of subjects for an activity (E.g. Patient, Practitioner, Organization, Location, etc.).", - "valueSet": "http://hl7.org/fhir/ValueSet/subject-type" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.subject" - } - ] - }, - { - "id": "ActivityDefinition.date", - "path": "ActivityDefinition.date", - "short": "Date last changed", - "definition": "The date (and optionally time) when the activity definition was published. The date must change when the business version changes and it must change if the status code changes. In addition, it should change when the substantive content of the activity definition changes.", - "comment": "Note that this is not the same as the resource last-modified-date, since the resource may be a secondary representation of the activity definition. Additional specific dates may be added as extensions or be found by consulting Provenances associated with past versions of the resource.", - "alias": [ - "Revision Date" - ], - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.date", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "dateTime" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.date" - }, - { - "identity": "w5", - "map": "FiveWs.recorded" - }, - { - "identity": "rim", - "map": ".participation[typeCode=AUT].time" - } - ] - }, - { - "id": "ActivityDefinition.publisher", - "path": "ActivityDefinition.publisher", - "short": "Name of the publisher (organization or individual)", - "definition": "The name of the organization or individual that published the activity definition.", - "comment": "Usually an organization but may be an individual. The publisher (or steward) of the activity definition is the organization or individual primarily responsible for the maintenance and upkeep of the activity definition. This is not necessarily the same individual or organization that developed and initially authored the content. The publisher is the primary point of contact for questions or issues with the activity definition. This item SHOULD be populated unless the information is available from context.", - "requirements": "Helps establish the \"authority/credibility\" of the activity definition. May also allow for contact.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.publisher", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.publisher {as string instead of CodeableConcept}" - }, - { - "identity": "w5", - "map": "FiveWs.witness" - }, - { - "identity": "rim", - "map": ".participation[typeCode=AUT].role" - } - ] - }, - { - "id": "ActivityDefinition.contact", - "path": "ActivityDefinition.contact", - "short": "Contact details for the publisher", - "definition": "Contact details to assist a user in finding and communicating with the publisher.", - "comment": "May be a web site, an email address, a telephone number, etc.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition.contact", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "ContactDetail" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.contact" - }, - { - "identity": "rim", - "map": ".participation[typeCode=CALLBCK].role" - } - ] - }, - { - "id": "ActivityDefinition.description", - "path": "ActivityDefinition.description", - "short": "Natural language description of the activity definition", - "definition": "A free text natural language description of the activity definition from a consumer's perspective.", - "comment": "This description can be used to capture details such as why the activity definition was built, comments about misuse, instructions for clinical use and interpretation, literature references, examples from the paper world, etc. It is not a rendering of the activity definition as conveyed in the 'text' field of the resource itself. This item SHOULD be populated unless the information is available from context (e.g. the language of the activity definition is presumed to be the predominant language in the place the activity definition was created).", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.description", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "markdown" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.description" - }, - { - "identity": "rim", - "map": ".text" - } - ] - }, - { - "id": "ActivityDefinition.useContext", - "path": "ActivityDefinition.useContext", - "short": "The context that the content is intended to support", - "definition": "The content was developed with a focus and intent of supporting the contexts that are listed. These contexts may be general categories (gender, age, ...) or may be references to specific programs (insurance plans, studies, ...) and may be used to assist with indexing and searching for appropriate activity definition instances.", - "comment": "When multiple useContexts are specified, there is no expectation that all or any of the contexts apply.", - "requirements": "Assist in searching for appropriate content.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition.useContext", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "UsageContext" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.useContext" - }, - { - "identity": "rim", - "map": "N/A (to add?)" - } - ] - }, - { - "id": "ActivityDefinition.jurisdiction", - "path": "ActivityDefinition.jurisdiction", - "short": "Intended jurisdiction for activity definition (if applicable)", - "definition": "A legal or geographic region in which the activity definition is intended to be used.", - "comment": "It may be possible for the activity definition to be used in jurisdictions other than those for which it was originally designed or intended.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition.jurisdiction", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "Jurisdiction" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "extensible", - "description": "Countries and regions within which this artifact is targeted for use.", - "valueSet": "http://hl7.org/fhir/ValueSet/jurisdiction" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.jurisdiction" - }, - { - "identity": "rim", - "map": "N/A (to add?)" - } - ] - }, - { - "id": "ActivityDefinition.purpose", - "path": "ActivityDefinition.purpose", - "short": "Why this activity definition is defined", - "definition": "Explanation of why this activity definition is needed and why it has been designed as it has.", - "comment": "This element does not describe the usage of the activity definition. Instead, it provides traceability of ''why'' the resource is either needed or ''why'' it is defined as it is. This may be used to point to source materials or specifications that drove the structure of this activity definition.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.purpose", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "markdown" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.purpose" - }, - { - "identity": "w5", - "map": "FiveWs.why[x]" - }, - { - "identity": "rim", - "map": ".reasonCode.text" - }, - { - "identity": "objimpl", - "map": "no-gen-base" - } - ] - }, - { - "id": "ActivityDefinition.usage", - "path": "ActivityDefinition.usage", - "short": "Describes the clinical usage of the activity definition", - "definition": "A detailed description of how the activity definition is used from a clinical perspective.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.usage", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A (to add?)" - } - ] - }, - { - "id": "ActivityDefinition.copyright", - "path": "ActivityDefinition.copyright", - "short": "Use and/or publishing restrictions", - "definition": "A copyright statement relating to the activity definition and/or its contents. Copyright statements are generally legal restrictions on the use and publishing of the activity definition.", - "requirements": "Consumers must be able to determine any legal restrictions on the use of the activity definition and/or its content.", - "alias": [ - "License", - "Restrictions" - ], - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.copyright", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "markdown" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.copyright" - }, - { - "identity": "rim", - "map": "N/A (to add?)" - }, - { - "identity": "objimpl", - "map": "no-gen-base" - } - ] - }, - { - "id": "ActivityDefinition.approvalDate", - "path": "ActivityDefinition.approvalDate", - "short": "When the activity definition was approved by publisher", - "definition": "The date on which the resource content was approved by the publisher. Approval happens once when the content is officially approved for usage.", - "comment": "The 'date' element may be more recent than the approval date because of minor changes or editorial corrections.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.approvalDate", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "date" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.approvalDate" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=\"SUBJ\"].act[classCode=CACT;moodCode=EVN;code=\"approval\"].effectiveTime" - }, - { - "identity": "objimpl", - "map": "no-gen-base" - } - ] - }, - { - "id": "ActivityDefinition.lastReviewDate", - "path": "ActivityDefinition.lastReviewDate", - "short": "When the activity definition was last reviewed", - "definition": "The date on which the resource content was last reviewed. Review happens periodically after approval but does not change the original approval date.", - "comment": "If specified, this date follows the original approval date.", - "requirements": "Gives a sense of how \"current\" the content is. Resources that have not been reviewed in a long time may have a risk of being less appropriate/relevant.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.lastReviewDate", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "date" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.lastReviewDate" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=\"SUBJ\"; subsetCode=\"RECENT\"].act[classCode=CACT;moodCode=EVN;code=\"review\"].effectiveTime" - }, - { - "identity": "objimpl", - "map": "no-gen-base" - } - ] - }, - { - "id": "ActivityDefinition.effectivePeriod", - "path": "ActivityDefinition.effectivePeriod", - "short": "When the activity definition is expected to be used", - "definition": "The period during which the activity definition content was or is planned to be in active use.", - "comment": "The effective period for a activity definition determines when the content is applicable for usage and is independent of publication and review dates. For example, a measure intended to be used for the year 2016 might be published in 2015.", - "requirements": "Allows establishing a transition before a resource comes into effect and also allows for a sunsetting process when new versions of the activity definition are or are expected to be used instead.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.effectivePeriod", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Period" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Definition.effectivePeriod" - }, - { - "identity": "rim", - "map": "N/A (to add?)" - }, - { - "identity": "objimpl", - "map": "no-gen-base" - } - ] - }, - { - "id": "ActivityDefinition.topic", - "path": "ActivityDefinition.topic", - "short": "E.g. Education, Treatment, Assessment, etc.", - "definition": "Descriptive topics related to the content of the activity. Topics provide a high-level categorization of the activity that can be useful for filtering and searching.", - "requirements": "Repositories must be able to determine how to categorize the activity definition so that it can be found by topical searches.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition.topic", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "DefinitionTopic" - } - ], - "strength": "example", - "description": "High-level categorization of the definition, used for searching, sorting, and filtering.", - "valueSet": "http://hl7.org/fhir/ValueSet/definition-topic" - }, - "mapping": [ - { - "identity": "rim", - "map": "N/A (to add?)" - } - ] - }, - { - "id": "ActivityDefinition.author", - "path": "ActivityDefinition.author", - "short": "Who authored the content", - "definition": "An individiual or organization primarily involved in the creation and maintenance of the content.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition.author", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "ContactDetail" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": ".participation[typeCode=AUT]" - } - ] - }, - { - "id": "ActivityDefinition.editor", - "path": "ActivityDefinition.editor", - "short": "Who edited the content", - "definition": "An individual or organization primarily responsible for internal coherence of the content.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition.editor", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "ContactDetail" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ActivityDefinition.reviewer", - "path": "ActivityDefinition.reviewer", - "short": "Who reviewed the content", - "definition": "An individual or organization primarily responsible for review of some aspect of the content.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition.reviewer", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "ContactDetail" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": ".participation[typeCode=VRF] {not clear whether VRF best corresponds to reviewer or endorser}" - } - ] - }, - { - "id": "ActivityDefinition.endorser", - "path": "ActivityDefinition.endorser", - "short": "Who endorsed the content", - "definition": "An individual or organization responsible for officially endorsing the content for use in some setting.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition.endorser", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "ContactDetail" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": ".participation[typeCode=VRF] {not clear whether VRF best corresponds to reviewer or endorser}" - } - ] - }, - { - "id": "ActivityDefinition.relatedArtifact", - "path": "ActivityDefinition.relatedArtifact", - "short": "Additional documentation, citations, etc.", - "definition": "Related artifacts such as additional documentation, justification, or bibliographic references.", - "comment": "Each related artifact is either an attachment, or a reference to another resource, but not both.", - "requirements": "Activity definitions must be able to provide enough information for consumers of the content (and/or interventions or results produced by the content) to be able to determine and understand the justification for and evidence in support of the content.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition.relatedArtifact", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "RelatedArtifact" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=DOC,RSON,PREV, DRIV, USE, COMP] {successor would be PREV w/ inversionInd=true; No support for citation}" - } - ] - }, - { - "id": "ActivityDefinition.library", - "path": "ActivityDefinition.library", - "short": "Logic used by the activity definition", - "definition": "A reference to a Library resource containing any formal logic used by the activity definition.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition.library", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "canonical", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Library" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=USE].target[classCode=GROUPER,moodCode=EVN]" - } - ] - }, - { - "id": "ActivityDefinition.kind", - "path": "ActivityDefinition.kind", - "short": "Kind of resource", - "definition": "A description of the kind of resource the activity definition is representing. For example, a MedicationRequest, a ServiceRequest, or a CommunicationRequest. Typically, but not always, this is a Request resource.", - "comment": "May determine what types of extensions are permitted.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.kind", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ActivityDefinitionKind" - } - ], - "strength": "required", - "description": "The kind of activity the definition is describing.", - "valueSet": "http://hl7.org/fhir/ValueSet/request-resource-types|4.0.1" - }, - "mapping": [ - { - "identity": "rim", - "map": ".classCode" - } - ] - }, - { - "id": "ActivityDefinition.profile", - "path": "ActivityDefinition.profile", - "short": "What profile the resource needs to conform to", - "definition": "A profile to which the target of the activity definition is expected to conform.", - "requirements": "Allows profiles to be used to describe the types of activities that can be performed within a workflow, protocol, or order set.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.profile", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "canonical", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/StructureDefinition" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ActivityDefinition.code", - "path": "ActivityDefinition.code", - "short": "Detail type of activity", - "definition": "Detailed description of the type of activity; e.g. What lab test, what procedure, what kind of encounter.", - "comment": "Tends to be less relevant for activities involving particular products.", - "requirements": "Allows matching performed to planned as well as validation against protocols.", - "min": 1, - "max": "1", - "base": { - "path": "ActivityDefinition.code", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ActivityDefinitionType" - } - ], - "strength": "example", - "description": "Detailed type of the activity; e.g. CBC.", - "valueSet": "http://hl7.org/fhir/ValueSet/procedure-code" - }, - "mapping": [ - { - "identity": "rim", - "map": ".code" - } - ] - }, - { - "id": "ActivityDefinition.intent", - "path": "ActivityDefinition.intent", - "short": "proposal | plan | directive | order | original-order | reflex-order | filler-order | instance-order | option", - "definition": "Indicates the level of authority/intentionality associated with the activity and where the request should fit into the workflow chain.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.intent", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "RequestIntent" - } - ], - "strength": "required", - "description": "Codes indicating the degree of authority/intentionality associated with a request.", - "valueSet": "http://hl7.org/fhir/ValueSet/request-intent|4.0.1" - } - }, - { - "id": "ActivityDefinition.priority", - "path": "ActivityDefinition.priority", - "short": "routine | urgent | asap | stat", - "definition": "Indicates how quickly the activity should be addressed with respect to other requests.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.priority", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "RequestPriority" - } - ], - "strength": "required", - "description": "Identifies the level of importance to be assigned to actioning the request.", - "valueSet": "http://hl7.org/fhir/ValueSet/request-priority|4.0.1" - } - }, - { - "id": "ActivityDefinition.doNotPerform", - "path": "ActivityDefinition.doNotPerform", - "short": "True if the activity should not be performed", - "definition": "Set this to true if the definition is to indicate that a particular activity should NOT be performed. If true, this element should be interpreted to reinforce a negative coding. For example NPO as a code with a doNotPerform of true would still indicate to NOT perform the action.", - "comment": "This element is not intended to be used to communicate a decision support response to cancel an order in progress. That should be done with the \"remove\" type of a PlanDefinition or RequestGroup.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.doNotPerform", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "boolean" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "If true this element negates the specified action. For Example, instead of a request for a procedure, it is a request for the procedure to not occur.", - "isSummary": true - }, - { - "id": "ActivityDefinition.timing[x]", - "path": "ActivityDefinition.timing[x]", - "short": "When activity is to occur", - "definition": "The period, timing or frequency upon which the described activity is to occur.", - "requirements": "Allows prompting for activities and detection of missed planned activities.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.timing[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Timing" - }, - { - "code": "dateTime" - }, - { - "code": "Age" - }, - { - "code": "Period" - }, - { - "code": "Range" - }, - { - "code": "Duration" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": ".effectiveTime" - } - ] - }, - { - "id": "ActivityDefinition.location", - "path": "ActivityDefinition.location", - "short": "Where it should happen", - "definition": "Identifies the facility where the activity will occur; e.g. home, hospital, specific clinic, etc.", - "comment": "May reference a specific clinical location or may just identify a type of location.", - "requirements": "Helps in planning of activity.", - "alias": [ - "facility" - ], - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.location", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Location" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": ".participation[typeCode=LOC].role" - } - ] - }, - { - "id": "ActivityDefinition.participant", - "path": "ActivityDefinition.participant", - "short": "Who should participate in the action", - "definition": "Indicates who should participate in performing the action described.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition.participant", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": ".participation[typeCode=PFM]" - } - ] - }, - { - "id": "ActivityDefinition.participant.id", - "path": "ActivityDefinition.participant.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ActivityDefinition.participant.extension", - "path": "ActivityDefinition.participant.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ActivityDefinition.participant.modifierExtension", - "path": "ActivityDefinition.participant.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ActivityDefinition.participant.type", - "path": "ActivityDefinition.participant.type", - "short": "patient | practitioner | related-person | device", - "definition": "The type of participant in the action.", - "min": 1, - "max": "1", - "base": { - "path": "ActivityDefinition.participant.type", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ActivityParticipantType" - } - ], - "strength": "required", - "description": "The type of participant in the activity.", - "valueSet": "http://hl7.org/fhir/ValueSet/action-participant-type|4.0.1" - }, - "mapping": [ - { - "identity": "rim", - "map": ".role.classCode" - } - ] - }, - { - "id": "ActivityDefinition.participant.role", - "path": "ActivityDefinition.participant.role", - "short": "E.g. Nurse, Surgeon, Parent, etc.", - "definition": "The role the participant should play in performing the described action.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.participant.role", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ActivityParticipantRole" - } - ], - "strength": "example", - "description": "Defines roles played by participants for the action.", - "valueSet": "http://hl7.org/fhir/ValueSet/action-participant-role" - }, - "mapping": [ - { - "identity": "rim", - "map": ".role.code" - } - ] - }, - { - "id": "ActivityDefinition.product[x]", - "path": "ActivityDefinition.product[x]", - "short": "What's administered/supplied", - "definition": "Identifies the food, drug or other product being consumed or supplied in the activity.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.product[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Medication", - "http://hl7.org/fhir/StructureDefinition/Substance" - ] - }, - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ActivityProduct" - } - ], - "strength": "example", - "description": "Code describing the type of substance or medication.", - "valueSet": "http://hl7.org/fhir/ValueSet/medication-codes" - }, - "mapping": [ - { - "identity": "rim", - "map": ".participation[typeCode=CSM].role" - } - ] - }, - { - "id": "ActivityDefinition.quantity", - "path": "ActivityDefinition.quantity", - "short": "How much is administered/consumed/supplied", - "definition": "Identifies the quantity expected to be consumed at once (per dose, per meal, etc.).", - "alias": [ - "dose" - ], - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.quantity", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Quantity", - "profile": [ - "http://hl7.org/fhir/StructureDefinition/SimpleQuantity" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": ".quantity {for classCode=SPLY}" - } - ] - }, - { - "id": "ActivityDefinition.dosage", - "path": "ActivityDefinition.dosage", - "short": "Detailed dosage instructions", - "definition": "Provides detailed dosage instructions in the same way that they are described for MedicationRequest resources.", - "comment": "If a dosage instruction is used, the definition should not specify timing or quantity.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition.dosage", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Dosage" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=COMP].target[classCode=SBADM; moodCode=DEFN]" - } - ] - }, - { - "id": "ActivityDefinition.bodySite", - "path": "ActivityDefinition.bodySite", - "short": "What part of body to perform on", - "definition": "Indicates the sites on the subject's body where the procedure should be performed (I.e. the target sites).", - "comment": "Only used if not implicit in the code found in ServiceRequest.type.", - "requirements": "Knowing where the procedure is made is important for tracking if multiple sites are possible.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition.bodySite", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "BodySite" - } - ], - "strength": "example", - "description": "A code that identifies the anatomical location.", - "valueSet": "http://hl7.org/fhir/ValueSet/body-site" - }, - "mapping": [ - { - "identity": "rim", - "map": ".targetSiteCode {for classCode=PROC, SBADM}" - } - ] - }, - { - "id": "ActivityDefinition.specimenRequirement", - "path": "ActivityDefinition.specimenRequirement", - "short": "What specimens are required to perform this action", - "definition": "Defines specimen requirements for the action to be performed, such as required specimens for a lab test.", - "requirements": "Needed to represent lab order definitions.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition.specimenRequirement", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/SpecimenDefinition" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ActivityDefinition.observationRequirement", - "path": "ActivityDefinition.observationRequirement", - "short": "What observations are required to perform this action", - "definition": "Defines observation requirements for the action to be performed, such as body weight or surface area.", - "requirements": "Needed to represent observation definitions.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition.observationRequirement", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/ObservationDefinition" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ActivityDefinition.observationResultRequirement", - "path": "ActivityDefinition.observationResultRequirement", - "short": "What observations must be produced by this action", - "definition": "Defines the observations that are expected to be produced by the action.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition.observationResultRequirement", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/ObservationDefinition" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ActivityDefinition.transform", - "path": "ActivityDefinition.transform", - "short": "Transform to apply the template", - "definition": "A reference to a StructureMap resource that defines a transform that can be executed to produce the intent resource using the ActivityDefinition instance as the input.", - "comment": "Note that if both a transform and dynamic values are specified, the dynamic values will be applied to the result of the transform.", - "min": 0, - "max": "1", - "base": { - "path": "ActivityDefinition.transform", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "canonical", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/StructureMap" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ActivityDefinition.dynamicValue", - "path": "ActivityDefinition.dynamicValue", - "short": "Dynamic aspects of the definition", - "definition": "Dynamic values that will be evaluated to produce values for elements of the resulting resource. For example, if the dosage of a medication must be computed based on the patient's weight, a dynamic value would be used to specify an expression that calculated the weight, and the path on the request resource that would contain the result.", - "comment": "Dynamic values are applied in the order in which they are defined in the ActivityDefinition. Note that if both a transform and dynamic values are specified, the dynamic values will be applied to the result of the transform.", - "min": 0, - "max": "*", - "base": { - "path": "ActivityDefinition.dynamicValue", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ActivityDefinition.dynamicValue.id", - "path": "ActivityDefinition.dynamicValue.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ActivityDefinition.dynamicValue.extension", - "path": "ActivityDefinition.dynamicValue.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ActivityDefinition.dynamicValue.modifierExtension", - "path": "ActivityDefinition.dynamicValue.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ActivityDefinition.dynamicValue.path", - "path": "ActivityDefinition.dynamicValue.path", - "short": "The path to the element to be set dynamically", - "definition": "The path to the element to be customized. This is the path on the resource that will hold the result of the calculation defined by the expression. The specified path SHALL be a FHIRPath resolveable on the specified target type of the ActivityDefinition, and SHALL consist only of identifiers, constant indexers, and a restricted subset of functions. The path is allowed to contain qualifiers (.) to traverse sub-elements, as well as indexers ([x]) to traverse multiple-cardinality sub-elements (see the [Simple FHIRPath Profile](http://hl7.org/fhir/R4/fhirpath.html#simple) for full details).", - "comment": "The path attribute contains a [Simple FHIRPath Subset](http://hl7.org/fhir/R4/fhirpath.html#simple) that allows path traversal, but not calculation.", - "min": 1, - "max": "1", - "base": { - "path": "ActivityDefinition.dynamicValue.path", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ActivityDefinition.dynamicValue.expression", - "path": "ActivityDefinition.dynamicValue.expression", - "short": "An expression that provides the dynamic value for the customization", - "definition": "An expression specifying the value of the customized element.", - "comment": "The expression may be inlined, or may be a reference to a named expression within a logic library referenced by the library element.", - "min": 1, - "max": "1", - "base": { - "path": "ActivityDefinition.dynamicValue.expression", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "Expression" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - } - ] - }, - "differential": { - "element": [ - { - "id": "ActivityDefinition", - "path": "ActivityDefinition" - }, - { - "id": "ActivityDefinition.code", - "path": "ActivityDefinition.code", - "min": 1 - } - ] - } +{ + "resourceType" : "StructureDefinition", + "id" : "study-data-dictionary-table", + "text" : { + "status" : "extensions", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-data-dictionary-table-definitions.html#ActivityDefinition\">ActivityDefinition</a><a name=\"ActivityDefinition\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/activitydefinition.html\">ActivityDefinition</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">The definition of a specific activity to be taken, independent of any particular patient or context</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-data-dictionary-table-definitions.html#ActivityDefinition.code\">code</a><a name=\"ActivityDefinition.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Detail type of activity</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" + }, + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", + "valueString" : "Specialized.Definitional Artifacts" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", + "valueCode" : "anonymous" + }], + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-table", + "version" : "0.2.0", + "name" : "StudyDataDictionaryTable", + "title" : "NCPI Study Data Dictionary Data Table", + "status" : "draft", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "Aggregates Variable Details associated with a single dataset table that are represented in FHIR as as list of references to StudyDataDictionaryVariables in the *observationResultRequirement* property.", + "fhirVersion" : "4.0.1", + "mapping" : [{ + "identity" : "workflow", + "uri" : "http://hl7.org/fhir/workflow", + "name" : "Workflow Pattern" + }, + { + "identity" : "rim", + "uri" : "http://hl7.org/v3", + "name" : "RIM Mapping" + }, + { + "identity" : "w5", + "uri" : "http://hl7.org/fhir/fivews", + "name" : "FiveWs Pattern Mapping" + }, + { + "identity" : "objimpl", + "uri" : "http://hl7.org/fhir/object-implementation", + "name" : "Object Implementation Information" + }], + "kind" : "resource", + "abstract" : false, + "type" : "ActivityDefinition", + "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/ActivityDefinition", + "derivation" : "constraint", + "snapshot" : { + "element" : [{ + "id" : "ActivityDefinition", + "path" : "ActivityDefinition", + "short" : "The definition of a specific activity to be taken, independent of any particular patient or context", + "definition" : "This resource allows for the definition of some activity to be performed, independent of a particular patient, practitioner, or other performance context.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition", + "min" : 0, + "max" : "*" + }, + "constraint" : [{ + "key" : "adf-0", + "severity" : "warning", + "human" : "Name should be usable as an identifier for the module by machine processing applications such as code generation", + "expression" : "name.matches('[A-Z]([A-Za-z0-9_]){0,254}')", + "xpath" : "not(exists(f:name/@value)) or matches(f:name/@value, '[A-Z]([A-Za-z0-9_]){0,254}')", + "source" : "http://hl7.org/fhir/StructureDefinition/ActivityDefinition" + }, + { + "key" : "dom-2", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL NOT contain nested Resources", + "expression" : "contained.contained.empty()", + "xpath" : "not(parent::f:contained and f:contained)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-3", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", + "expression" : "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", + "xpath" : "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-4", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", + "expression" : "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-5", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a security label", + "expression" : "contained.meta.security.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:security))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", + "valueBoolean" : true + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", + "valueMarkdown" : "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." + }], + "key" : "dom-6", + "severity" : "warning", + "human" : "A resource should have narrative for robust management", + "expression" : "text.`div`.exists()", + "xpath" : "exists(f:text/h:div)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Entity. Role, or Act" + }, + { + "identity" : "workflow", + "map" : "Definition" + }, + { + "identity" : "rim", + "map" : "Act[classCode=ACT; moodCode=DEFN]" + }] + }, + { + "id" : "ActivityDefinition.id", + "path" : "ActivityDefinition.id", + "short" : "Logical id of this artifact", + "definition" : "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", + "comment" : "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "id" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "ActivityDefinition.meta", + "path" : "ActivityDefinition.meta", + "short" : "Metadata about the resource", + "definition" : "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.meta", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Meta" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "ActivityDefinition.implicitRules", + "path" : "ActivityDefinition.implicitRules", + "short" : "A set of rules under which this content was created", + "definition" : "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", + "comment" : "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.implicitRules", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", + "isSummary" : true + }, + { + "id" : "ActivityDefinition.language", + "path" : "ActivityDefinition.language", + "short" : "Language of the resource content", + "definition" : "The base language in which the resource is written.", + "comment" : "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.language", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", + "valueCanonical" : "http://hl7.org/fhir/ValueSet/all-languages" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "Language" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "preferred", + "description" : "A human language.", + "valueSet" : "http://hl7.org/fhir/ValueSet/languages" + } + }, + { + "id" : "ActivityDefinition.text", + "path" : "ActivityDefinition.text", + "short" : "Text summary of the resource, for human interpretation", + "definition" : "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", + "comment" : "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", + "alias" : ["narrative", + "html", + "xhtml", + "display"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "DomainResource.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Narrative" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Act.text?" + }] + }, + { + "id" : "ActivityDefinition.contained", + "path" : "ActivityDefinition.contained", + "short" : "Contained, inline Resources", + "definition" : "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", + "comment" : "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", + "alias" : ["inline resources", + "anonymous resources", + "contained resources"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.contained", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Resource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ActivityDefinition.extension", + "path" : "ActivityDefinition.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ActivityDefinition.modifierExtension", + "path" : "ActivityDefinition.modifierExtension", + "short" : "Extensions that cannot be ignored", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ActivityDefinition.url", + "path" : "ActivityDefinition.url", + "short" : "Canonical identifier for this activity definition, represented as a URI (globally unique)", + "definition" : "An absolute URI that is used to identify this activity definition when it is referenced in a specification, model, design or an instance; also called its canonical identifier. This SHOULD be globally unique and SHOULD be a literal address at which at which an authoritative instance of this activity definition is (or will be) published. This URL can be the target of a canonical reference. It SHALL remain the same when the activity definition is stored on different servers.", + "comment" : "Can be a urn:uuid: or a urn:oid: but real http: addresses are preferred. Multiple instances may share the same URL if they have a distinct version.\n\nThe determination of when to create a new version of a resource (same url, new version) vs. defining a new artifact is up to the author. Considerations for making this decision are found in [Technical and Business Versions](http://hl7.org/fhir/R4/resource.html#versions). \n\nIn some cases, the resource can no longer be found at the stated url, but the url itself cannot change. Implementations can use the [meta.source](http://hl7.org/fhir/R4/resource.html#meta) element to indicate where the current master source of the resource can be found.", + "requirements" : "Allows the activity definition to be referenced by a single globally unique identifier.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.url", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.url" + }, + { + "identity" : "w5", + "map" : "FiveWs.identifier" + }, + { + "identity" : "rim", + "map" : ".identifier[scope=BUSN;reliability=ISS]" + }] + }, + { + "id" : "ActivityDefinition.identifier", + "path" : "ActivityDefinition.identifier", + "short" : "Additional identifier for the activity definition", + "definition" : "A formal identifier that is used to identify this activity definition when it is represented in other formats, or referenced in a specification, model, design or an instance.", + "comment" : "Typically, this is used for identifiers that can go in an HL7 V3 II (instance identifier) data type, and can then identify this activity definition outside of FHIR, where it is not possible to use the logical URI.", + "requirements" : "Allows externally provided and/or usable business identifiers to be easily associated with the module.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition.identifier", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Identifier" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.identifier" + }, + { + "identity" : "w5", + "map" : "FiveWs.identifier" + }, + { + "identity" : "rim", + "map" : ".identifier" + }, + { + "identity" : "objimpl", + "map" : "no-gen-base" + }] + }, + { + "id" : "ActivityDefinition.version", + "path" : "ActivityDefinition.version", + "short" : "Business version of the activity definition", + "definition" : "The identifier that is used to identify this version of the activity definition when it is referenced in a specification, model, design or instance. This is an arbitrary value managed by the activity definition author and is not expected to be globally unique. For example, it might be a timestamp (e.g. yyyymmdd) if a managed version is not available. There is also no expectation that versions can be placed in a lexicographical sequence. To provide a version consistent with the Decision Support Service specification, use the format Major.Minor.Revision (e.g. 1.0.0). For more information on versioning knowledge assets, refer to the Decision Support Service specification. Note that a version is required for non-experimental active assets.", + "comment" : "There may be different activity definition instances that have the same identifier but different versions. The version can be appended to the url in a reference to allow a reference to a particular business version of the activity definition with the format [url]|[version].", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.version", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.version" + }, + { + "identity" : "w5", + "map" : "FiveWs.version" + }, + { + "identity" : "rim", + "map" : "N/A (to add?)" + }] + }, + { + "id" : "ActivityDefinition.name", + "path" : "ActivityDefinition.name", + "short" : "Name for this activity definition (computer friendly)", + "definition" : "A natural language name identifying the activity definition. This name should be usable as an identifier for the module by machine processing applications such as code generation.", + "comment" : "The name is not expected to be globally unique. The name should be a simple alphanumeric type name to ensure that it is machine-processing friendly.", + "requirements" : "Support human navigation and code generation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.name", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "condition" : ["inv-0"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ActivityDefinition.title", + "path" : "ActivityDefinition.title", + "short" : "Name for this activity definition (human friendly)", + "definition" : "A short, descriptive, user-friendly title for the activity definition.", + "comment" : "This name does not need to be machine-processing friendly and may contain punctuation, white-space, etc.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.title", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.title" + }, + { + "identity" : "rim", + "map" : ".title" + }] + }, + { + "id" : "ActivityDefinition.subtitle", + "path" : "ActivityDefinition.subtitle", + "short" : "Subordinate title of the activity definition", + "definition" : "An explanatory or alternate title for the activity definition giving additional information about its content.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.subtitle", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ActivityDefinition.status", + "path" : "ActivityDefinition.status", + "short" : "draft | active | retired | unknown", + "definition" : "The status of this activity definition. Enables tracking the life-cycle of the content.", + "comment" : "Allows filtering of activity definitions that are appropriate for use versus not.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.status", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This is labeled as \"Is Modifier\" because applications should not use a retired {{title}} without due consideration", + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "PublicationStatus" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "required", + "description" : "The lifecycle status of an artifact.", + "valueSet" : "http://hl7.org/fhir/ValueSet/publication-status|4.0.1" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.status {different ValueSet}" + }, + { + "identity" : "w5", + "map" : "FiveWs.status" + }, + { + "identity" : "rim", + "map" : ".status" + }] + }, + { + "id" : "ActivityDefinition.experimental", + "path" : "ActivityDefinition.experimental", + "short" : "For testing purposes, not real usage", + "definition" : "A Boolean value to indicate that this activity definition is authored for testing purposes (or education/evaluation/marketing) and is not intended to be used for genuine usage.", + "comment" : "Allows filtering of activity definitions that are appropriate for use versus not.", + "requirements" : "Enables experimental content to be developed following the same lifecycle that would be used for a production-level activity definition.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.experimental", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "boolean" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.experimental" + }, + { + "identity" : "w5", + "map" : "FiveWs.class" + }, + { + "identity" : "rim", + "map" : "N/A (to add?)" + }] + }, + { + "id" : "ActivityDefinition.subject[x]", + "path" : "ActivityDefinition.subject[x]", + "short" : "Type of individual the activity definition is intended for", + "definition" : "A code or group definition that describes the intended subject of the activity being defined.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.subject[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }, + { + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Group"] + }], + "meaningWhenMissing" : "Patient", + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "SubjectType" + }], + "strength" : "extensible", + "description" : "The possible types of subjects for an activity (E.g. Patient, Practitioner, Organization, Location, etc.).", + "valueSet" : "http://hl7.org/fhir/ValueSet/subject-type" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.subject" + }] + }, + { + "id" : "ActivityDefinition.date", + "path" : "ActivityDefinition.date", + "short" : "Date last changed", + "definition" : "The date (and optionally time) when the activity definition was published. The date must change when the business version changes and it must change if the status code changes. In addition, it should change when the substantive content of the activity definition changes.", + "comment" : "Note that this is not the same as the resource last-modified-date, since the resource may be a secondary representation of the activity definition. Additional specific dates may be added as extensions or be found by consulting Provenances associated with past versions of the resource.", + "alias" : ["Revision Date"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.date", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "dateTime" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.date" + }, + { + "identity" : "w5", + "map" : "FiveWs.recorded" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=AUT].time" + }] + }, + { + "id" : "ActivityDefinition.publisher", + "path" : "ActivityDefinition.publisher", + "short" : "Name of the publisher (organization or individual)", + "definition" : "The name of the organization or individual that published the activity definition.", + "comment" : "Usually an organization but may be an individual. The publisher (or steward) of the activity definition is the organization or individual primarily responsible for the maintenance and upkeep of the activity definition. This is not necessarily the same individual or organization that developed and initially authored the content. The publisher is the primary point of contact for questions or issues with the activity definition. This item SHOULD be populated unless the information is available from context.", + "requirements" : "Helps establish the \"authority/credibility\" of the activity definition. May also allow for contact.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.publisher", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.publisher {as string instead of CodeableConcept}" + }, + { + "identity" : "w5", + "map" : "FiveWs.witness" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=AUT].role" + }] + }, + { + "id" : "ActivityDefinition.contact", + "path" : "ActivityDefinition.contact", + "short" : "Contact details for the publisher", + "definition" : "Contact details to assist a user in finding and communicating with the publisher.", + "comment" : "May be a web site, an email address, a telephone number, etc.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition.contact", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "ContactDetail" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.contact" + }, + { + "identity" : "rim", + "map" : ".participation[typeCode=CALLBCK].role" + }] + }, + { + "id" : "ActivityDefinition.description", + "path" : "ActivityDefinition.description", + "short" : "Natural language description of the activity definition", + "definition" : "A free text natural language description of the activity definition from a consumer's perspective.", + "comment" : "This description can be used to capture details such as why the activity definition was built, comments about misuse, instructions for clinical use and interpretation, literature references, examples from the paper world, etc. It is not a rendering of the activity definition as conveyed in the 'text' field of the resource itself. This item SHOULD be populated unless the information is available from context (e.g. the language of the activity definition is presumed to be the predominant language in the place the activity definition was created).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.description", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "markdown" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.description" + }, + { + "identity" : "rim", + "map" : ".text" + }] + }, + { + "id" : "ActivityDefinition.useContext", + "path" : "ActivityDefinition.useContext", + "short" : "The context that the content is intended to support", + "definition" : "The content was developed with a focus and intent of supporting the contexts that are listed. These contexts may be general categories (gender, age, ...) or may be references to specific programs (insurance plans, studies, ...) and may be used to assist with indexing and searching for appropriate activity definition instances.", + "comment" : "When multiple useContexts are specified, there is no expectation that all or any of the contexts apply.", + "requirements" : "Assist in searching for appropriate content.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition.useContext", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "UsageContext" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.useContext" + }, + { + "identity" : "rim", + "map" : "N/A (to add?)" + }] + }, + { + "id" : "ActivityDefinition.jurisdiction", + "path" : "ActivityDefinition.jurisdiction", + "short" : "Intended jurisdiction for activity definition (if applicable)", + "definition" : "A legal or geographic region in which the activity definition is intended to be used.", + "comment" : "It may be possible for the activity definition to be used in jurisdictions other than those for which it was originally designed or intended.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition.jurisdiction", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "Jurisdiction" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "extensible", + "description" : "Countries and regions within which this artifact is targeted for use.", + "valueSet" : "http://hl7.org/fhir/ValueSet/jurisdiction" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.jurisdiction" + }, + { + "identity" : "rim", + "map" : "N/A (to add?)" + }] + }, + { + "id" : "ActivityDefinition.purpose", + "path" : "ActivityDefinition.purpose", + "short" : "Why this activity definition is defined", + "definition" : "Explanation of why this activity definition is needed and why it has been designed as it has.", + "comment" : "This element does not describe the usage of the activity definition. Instead, it provides traceability of ''why'' the resource is either needed or ''why'' it is defined as it is. This may be used to point to source materials or specifications that drove the structure of this activity definition.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.purpose", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "markdown" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.purpose" + }, + { + "identity" : "w5", + "map" : "FiveWs.why[x]" + }, + { + "identity" : "rim", + "map" : ".reasonCode.text" + }, + { + "identity" : "objimpl", + "map" : "no-gen-base" + }] + }, + { + "id" : "ActivityDefinition.usage", + "path" : "ActivityDefinition.usage", + "short" : "Describes the clinical usage of the activity definition", + "definition" : "A detailed description of how the activity definition is used from a clinical perspective.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.usage", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A (to add?)" + }] + }, + { + "id" : "ActivityDefinition.copyright", + "path" : "ActivityDefinition.copyright", + "short" : "Use and/or publishing restrictions", + "definition" : "A copyright statement relating to the activity definition and/or its contents. Copyright statements are generally legal restrictions on the use and publishing of the activity definition.", + "requirements" : "Consumers must be able to determine any legal restrictions on the use of the activity definition and/or its content.", + "alias" : ["License", + "Restrictions"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.copyright", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "markdown" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.copyright" + }, + { + "identity" : "rim", + "map" : "N/A (to add?)" + }, + { + "identity" : "objimpl", + "map" : "no-gen-base" + }] + }, + { + "id" : "ActivityDefinition.approvalDate", + "path" : "ActivityDefinition.approvalDate", + "short" : "When the activity definition was approved by publisher", + "definition" : "The date on which the resource content was approved by the publisher. Approval happens once when the content is officially approved for usage.", + "comment" : "The 'date' element may be more recent than the approval date because of minor changes or editorial corrections.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.approvalDate", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "date" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.approvalDate" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=\"SUBJ\"].act[classCode=CACT;moodCode=EVN;code=\"approval\"].effectiveTime" + }, + { + "identity" : "objimpl", + "map" : "no-gen-base" + }] + }, + { + "id" : "ActivityDefinition.lastReviewDate", + "path" : "ActivityDefinition.lastReviewDate", + "short" : "When the activity definition was last reviewed", + "definition" : "The date on which the resource content was last reviewed. Review happens periodically after approval but does not change the original approval date.", + "comment" : "If specified, this date follows the original approval date.", + "requirements" : "Gives a sense of how \"current\" the content is. Resources that have not been reviewed in a long time may have a risk of being less appropriate/relevant.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.lastReviewDate", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "date" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.lastReviewDate" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=\"SUBJ\"; subsetCode=\"RECENT\"].act[classCode=CACT;moodCode=EVN;code=\"review\"].effectiveTime" + }, + { + "identity" : "objimpl", + "map" : "no-gen-base" + }] + }, + { + "id" : "ActivityDefinition.effectivePeriod", + "path" : "ActivityDefinition.effectivePeriod", + "short" : "When the activity definition is expected to be used", + "definition" : "The period during which the activity definition content was or is planned to be in active use.", + "comment" : "The effective period for a activity definition determines when the content is applicable for usage and is independent of publication and review dates. For example, a measure intended to be used for the year 2016 might be published in 2015.", + "requirements" : "Allows establishing a transition before a resource comes into effect and also allows for a sunsetting process when new versions of the activity definition are or are expected to be used instead.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.effectivePeriod", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Period" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Definition.effectivePeriod" + }, + { + "identity" : "rim", + "map" : "N/A (to add?)" + }, + { + "identity" : "objimpl", + "map" : "no-gen-base" + }] + }, + { + "id" : "ActivityDefinition.topic", + "path" : "ActivityDefinition.topic", + "short" : "E.g. Education, Treatment, Assessment, etc.", + "definition" : "Descriptive topics related to the content of the activity. Topics provide a high-level categorization of the activity that can be useful for filtering and searching.", + "requirements" : "Repositories must be able to determine how to categorize the activity definition so that it can be found by topical searches.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition.topic", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "DefinitionTopic" + }], + "strength" : "example", + "description" : "High-level categorization of the definition, used for searching, sorting, and filtering.", + "valueSet" : "http://hl7.org/fhir/ValueSet/definition-topic" + }, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A (to add?)" + }] + }, + { + "id" : "ActivityDefinition.author", + "path" : "ActivityDefinition.author", + "short" : "Who authored the content", + "definition" : "An individiual or organization primarily involved in the creation and maintenance of the content.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition.author", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "ContactDetail" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : ".participation[typeCode=AUT]" + }] + }, + { + "id" : "ActivityDefinition.editor", + "path" : "ActivityDefinition.editor", + "short" : "Who edited the content", + "definition" : "An individual or organization primarily responsible for internal coherence of the content.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition.editor", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "ContactDetail" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ActivityDefinition.reviewer", + "path" : "ActivityDefinition.reviewer", + "short" : "Who reviewed the content", + "definition" : "An individual or organization primarily responsible for review of some aspect of the content.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition.reviewer", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "ContactDetail" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : ".participation[typeCode=VRF] {not clear whether VRF best corresponds to reviewer or endorser}" + }] + }, + { + "id" : "ActivityDefinition.endorser", + "path" : "ActivityDefinition.endorser", + "short" : "Who endorsed the content", + "definition" : "An individual or organization responsible for officially endorsing the content for use in some setting.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition.endorser", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "ContactDetail" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : ".participation[typeCode=VRF] {not clear whether VRF best corresponds to reviewer or endorser}" + }] + }, + { + "id" : "ActivityDefinition.relatedArtifact", + "path" : "ActivityDefinition.relatedArtifact", + "short" : "Additional documentation, citations, etc.", + "definition" : "Related artifacts such as additional documentation, justification, or bibliographic references.", + "comment" : "Each related artifact is either an attachment, or a reference to another resource, but not both.", + "requirements" : "Activity definitions must be able to provide enough information for consumers of the content (and/or interventions or results produced by the content) to be able to determine and understand the justification for and evidence in support of the content.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition.relatedArtifact", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "RelatedArtifact" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=DOC,RSON,PREV, DRIV, USE, COMP] {successor would be PREV w/ inversionInd=true; No support for citation}" + }] + }, + { + "id" : "ActivityDefinition.library", + "path" : "ActivityDefinition.library", + "short" : "Logic used by the activity definition", + "definition" : "A reference to a Library resource containing any formal logic used by the activity definition.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition.library", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "canonical", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Library"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=USE].target[classCode=GROUPER,moodCode=EVN]" + }] + }, + { + "id" : "ActivityDefinition.kind", + "path" : "ActivityDefinition.kind", + "short" : "Kind of resource", + "definition" : "A description of the kind of resource the activity definition is representing. For example, a MedicationRequest, a ServiceRequest, or a CommunicationRequest. Typically, but not always, this is a Request resource.", + "comment" : "May determine what types of extensions are permitted.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.kind", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ActivityDefinitionKind" + }], + "strength" : "required", + "description" : "The kind of activity the definition is describing.", + "valueSet" : "http://hl7.org/fhir/ValueSet/request-resource-types|4.0.1" + }, + "mapping" : [{ + "identity" : "rim", + "map" : ".classCode" + }] + }, + { + "id" : "ActivityDefinition.profile", + "path" : "ActivityDefinition.profile", + "short" : "What profile the resource needs to conform to", + "definition" : "A profile to which the target of the activity definition is expected to conform.", + "requirements" : "Allows profiles to be used to describe the types of activities that can be performed within a workflow, protocol, or order set.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.profile", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "canonical", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/StructureDefinition"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ActivityDefinition.code", + "path" : "ActivityDefinition.code", + "short" : "Detail type of activity", + "definition" : "Detailed description of the type of activity; e.g. What lab test, what procedure, what kind of encounter.", + "comment" : "Tends to be less relevant for activities involving particular products.", + "requirements" : "Allows matching performed to planned as well as validation against protocols.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.code", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ActivityDefinitionType" + }], + "strength" : "example", + "description" : "Detailed type of the activity; e.g. CBC.", + "valueSet" : "http://hl7.org/fhir/ValueSet/procedure-code" + }, + "mapping" : [{ + "identity" : "rim", + "map" : ".code" + }] + }, + { + "id" : "ActivityDefinition.intent", + "path" : "ActivityDefinition.intent", + "short" : "proposal | plan | directive | order | original-order | reflex-order | filler-order | instance-order | option", + "definition" : "Indicates the level of authority/intentionality associated with the activity and where the request should fit into the workflow chain.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.intent", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "RequestIntent" + }], + "strength" : "required", + "description" : "Codes indicating the degree of authority/intentionality associated with a request.", + "valueSet" : "http://hl7.org/fhir/ValueSet/request-intent|4.0.1" + } + }, + { + "id" : "ActivityDefinition.priority", + "path" : "ActivityDefinition.priority", + "short" : "routine | urgent | asap | stat", + "definition" : "Indicates how quickly the activity should be addressed with respect to other requests.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.priority", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "RequestPriority" + }], + "strength" : "required", + "description" : "Identifies the level of importance to be assigned to actioning the request.", + "valueSet" : "http://hl7.org/fhir/ValueSet/request-priority|4.0.1" + } + }, + { + "id" : "ActivityDefinition.doNotPerform", + "path" : "ActivityDefinition.doNotPerform", + "short" : "True if the activity should not be performed", + "definition" : "Set this to true if the definition is to indicate that a particular activity should NOT be performed. If true, this element should be interpreted to reinforce a negative coding. For example NPO as a code with a doNotPerform of true would still indicate to NOT perform the action.", + "comment" : "This element is not intended to be used to communicate a decision support response to cancel an order in progress. That should be done with the \"remove\" type of a PlanDefinition or RequestGroup.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.doNotPerform", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "boolean" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "If true this element negates the specified action. For Example, instead of a request for a procedure, it is a request for the procedure to not occur.", + "isSummary" : true + }, + { + "id" : "ActivityDefinition.timing[x]", + "path" : "ActivityDefinition.timing[x]", + "short" : "When activity is to occur", + "definition" : "The period, timing or frequency upon which the described activity is to occur.", + "requirements" : "Allows prompting for activities and detection of missed planned activities.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.timing[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Timing" + }, + { + "code" : "dateTime" + }, + { + "code" : "Age" + }, + { + "code" : "Period" + }, + { + "code" : "Range" + }, + { + "code" : "Duration" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : ".effectiveTime" + }] + }, + { + "id" : "ActivityDefinition.location", + "path" : "ActivityDefinition.location", + "short" : "Where it should happen", + "definition" : "Identifies the facility where the activity will occur; e.g. home, hospital, specific clinic, etc.", + "comment" : "May reference a specific clinical location or may just identify a type of location.", + "requirements" : "Helps in planning of activity.", + "alias" : ["facility"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.location", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Location"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : ".participation[typeCode=LOC].role" + }] + }, + { + "id" : "ActivityDefinition.participant", + "path" : "ActivityDefinition.participant", + "short" : "Who should participate in the action", + "definition" : "Indicates who should participate in performing the action described.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition.participant", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : ".participation[typeCode=PFM]" + }] + }, + { + "id" : "ActivityDefinition.participant.id", + "path" : "ActivityDefinition.participant.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ActivityDefinition.participant.extension", + "path" : "ActivityDefinition.participant.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ActivityDefinition.participant.modifierExtension", + "path" : "ActivityDefinition.participant.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ActivityDefinition.participant.type", + "path" : "ActivityDefinition.participant.type", + "short" : "patient | practitioner | related-person | device", + "definition" : "The type of participant in the action.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.participant.type", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ActivityParticipantType" + }], + "strength" : "required", + "description" : "The type of participant in the activity.", + "valueSet" : "http://hl7.org/fhir/ValueSet/action-participant-type|4.0.1" + }, + "mapping" : [{ + "identity" : "rim", + "map" : ".role.classCode" + }] + }, + { + "id" : "ActivityDefinition.participant.role", + "path" : "ActivityDefinition.participant.role", + "short" : "E.g. Nurse, Surgeon, Parent, etc.", + "definition" : "The role the participant should play in performing the described action.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.participant.role", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ActivityParticipantRole" + }], + "strength" : "example", + "description" : "Defines roles played by participants for the action.", + "valueSet" : "http://hl7.org/fhir/ValueSet/action-participant-role" + }, + "mapping" : [{ + "identity" : "rim", + "map" : ".role.code" + }] + }, + { + "id" : "ActivityDefinition.product[x]", + "path" : "ActivityDefinition.product[x]", + "short" : "What's administered/supplied", + "definition" : "Identifies the food, drug or other product being consumed or supplied in the activity.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.product[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Medication", + "http://hl7.org/fhir/StructureDefinition/Substance"] + }, + { + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ActivityProduct" + }], + "strength" : "example", + "description" : "Code describing the type of substance or medication.", + "valueSet" : "http://hl7.org/fhir/ValueSet/medication-codes" + }, + "mapping" : [{ + "identity" : "rim", + "map" : ".participation[typeCode=CSM].role" + }] + }, + { + "id" : "ActivityDefinition.quantity", + "path" : "ActivityDefinition.quantity", + "short" : "How much is administered/consumed/supplied", + "definition" : "Identifies the quantity expected to be consumed at once (per dose, per meal, etc.).", + "alias" : ["dose"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.quantity", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Quantity", + "profile" : ["http://hl7.org/fhir/StructureDefinition/SimpleQuantity"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : ".quantity {for classCode=SPLY}" + }] + }, + { + "id" : "ActivityDefinition.dosage", + "path" : "ActivityDefinition.dosage", + "short" : "Detailed dosage instructions", + "definition" : "Provides detailed dosage instructions in the same way that they are described for MedicationRequest resources.", + "comment" : "If a dosage instruction is used, the definition should not specify timing or quantity.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition.dosage", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Dosage" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=COMP].target[classCode=SBADM; moodCode=DEFN]" + }] + }, + { + "id" : "ActivityDefinition.bodySite", + "path" : "ActivityDefinition.bodySite", + "short" : "What part of body to perform on", + "definition" : "Indicates the sites on the subject's body where the procedure should be performed (I.e. the target sites).", + "comment" : "Only used if not implicit in the code found in ServiceRequest.type.", + "requirements" : "Knowing where the procedure is made is important for tracking if multiple sites are possible.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition.bodySite", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "BodySite" + }], + "strength" : "example", + "description" : "A code that identifies the anatomical location.", + "valueSet" : "http://hl7.org/fhir/ValueSet/body-site" + }, + "mapping" : [{ + "identity" : "rim", + "map" : ".targetSiteCode {for classCode=PROC, SBADM}" + }] + }, + { + "id" : "ActivityDefinition.specimenRequirement", + "path" : "ActivityDefinition.specimenRequirement", + "short" : "What specimens are required to perform this action", + "definition" : "Defines specimen requirements for the action to be performed, such as required specimens for a lab test.", + "requirements" : "Needed to represent lab order definitions.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition.specimenRequirement", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/SpecimenDefinition"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ActivityDefinition.observationRequirement", + "path" : "ActivityDefinition.observationRequirement", + "short" : "What observations are required to perform this action", + "definition" : "Defines observation requirements for the action to be performed, such as body weight or surface area.", + "requirements" : "Needed to represent observation definitions.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition.observationRequirement", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/ObservationDefinition"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ActivityDefinition.observationResultRequirement", + "path" : "ActivityDefinition.observationResultRequirement", + "short" : "What observations must be produced by this action", + "definition" : "Defines the observations that are expected to be produced by the action.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition.observationResultRequirement", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/ObservationDefinition"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ActivityDefinition.transform", + "path" : "ActivityDefinition.transform", + "short" : "Transform to apply the template", + "definition" : "A reference to a StructureMap resource that defines a transform that can be executed to produce the intent resource using the ActivityDefinition instance as the input.", + "comment" : "Note that if both a transform and dynamic values are specified, the dynamic values will be applied to the result of the transform.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.transform", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "canonical", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/StructureMap"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ActivityDefinition.dynamicValue", + "path" : "ActivityDefinition.dynamicValue", + "short" : "Dynamic aspects of the definition", + "definition" : "Dynamic values that will be evaluated to produce values for elements of the resulting resource. For example, if the dosage of a medication must be computed based on the patient's weight, a dynamic value would be used to specify an expression that calculated the weight, and the path on the request resource that would contain the result.", + "comment" : "Dynamic values are applied in the order in which they are defined in the ActivityDefinition. Note that if both a transform and dynamic values are specified, the dynamic values will be applied to the result of the transform.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ActivityDefinition.dynamicValue", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ActivityDefinition.dynamicValue.id", + "path" : "ActivityDefinition.dynamicValue.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ActivityDefinition.dynamicValue.extension", + "path" : "ActivityDefinition.dynamicValue.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ActivityDefinition.dynamicValue.modifierExtension", + "path" : "ActivityDefinition.dynamicValue.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ActivityDefinition.dynamicValue.path", + "path" : "ActivityDefinition.dynamicValue.path", + "short" : "The path to the element to be set dynamically", + "definition" : "The path to the element to be customized. This is the path on the resource that will hold the result of the calculation defined by the expression. The specified path SHALL be a FHIRPath resolveable on the specified target type of the ActivityDefinition, and SHALL consist only of identifiers, constant indexers, and a restricted subset of functions. The path is allowed to contain qualifiers (.) to traverse sub-elements, as well as indexers ([x]) to traverse multiple-cardinality sub-elements (see the [Simple FHIRPath Profile](http://hl7.org/fhir/R4/fhirpath.html#simple) for full details).", + "comment" : "The path attribute contains a [Simple FHIRPath Subset](http://hl7.org/fhir/R4/fhirpath.html#simple) that allows path traversal, but not calculation.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.dynamicValue.path", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ActivityDefinition.dynamicValue.expression", + "path" : "ActivityDefinition.dynamicValue.expression", + "short" : "An expression that provides the dynamic value for the customization", + "definition" : "An expression specifying the value of the customized element.", + "comment" : "The expression may be inlined, or may be a reference to a named expression within a logic library referenced by the library element.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "ActivityDefinition.dynamicValue.expression", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "Expression" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }] + }, + "differential" : { + "element" : [{ + "id" : "ActivityDefinition", + "path" : "ActivityDefinition" + }, + { + "id" : "ActivityDefinition.code", + "path" : "ActivityDefinition.code", + "min" : 1 + }] + } } \ No newline at end of file diff --git a/StructureDefinition-study-data-dictionary-table.profile.history.html b/StructureDefinition-study-data-dictionary-table.profile.history.html index 9180afe7..1f55295e 100644 --- a/StructureDefinition-study-data-dictionary-table.profile.history.html +++ b/StructureDefinition-study-data-dictionary-table.profile.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -298,7 +298,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Change History</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -356,7 +356,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-table.profile.json.html b/StructureDefinition-study-data-dictionary-table.profile.json.html index d8817cf7..8d7fe39e 100644 --- a/StructureDefinition-study-data-dictionary-table.profile.json.html +++ b/StructureDefinition-study-data-dictionary-table.profile.json.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - JSON Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -342,7 +342,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - JSON Profile</h2> "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a>" : "StudyDataDictionaryTable", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a>" : "NCPI Study Data Dictionary Data Table", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a>" : "draft", - "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>" : [ { @@ -3267,7 +3267,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - JSON Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-table.profile.ttl.html b/StructureDefinition-study-data-dictionary-table.profile.ttl.html index 66033ab5..c47feebc 100644 --- a/StructureDefinition-study-data-dictionary-table.profile.ttl.html +++ b/StructureDefinition-study-data-dictionary-table.profile.ttl.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - TTL Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -329,11 +329,11 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - TTL Profile</h2> a fhir:StructureDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "study-data-dictionary-table"]; + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "study-data-dictionary-table"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description &amp; Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-data-dictionary-table-definitions.html#ActivityDefinition\">ActivityDefinition</a><a name=\"ActivityDefinition\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/activitydefinition.html\">ActivityDefinition</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">The definition of a specific activity to be taken, independent of any particular patient or context</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-data-dictionary-table-definitions.html#ActivityDefinition.code\">code</a><a name=\"ActivityDefinition.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Detail type of activity</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -342,14 +342,14 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "anonymous" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-table"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "StudyDataDictionaryTable"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI Study Data Dictionary Data Table"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-table"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "StudyDataDictionaryTable"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI Study Data Dictionary Data Table"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">fhir:StructureDefinition.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -365,9 +365,9 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Aggregates Variable Details associated with a single dataset table that are represented in FHIR as as list of references to StudyDataDictionaryVariables in the *observationResultRequirement* property."]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Aggregates Variable Details associated with a single dataset table that are represented in FHIR as as list of references to StudyDataDictionaryVariables in the *observationResultRequirement* property."]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping">fhir:StructureDefinition.mapping</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "workflow" ]; @@ -388,15 +388,15 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "objimpl" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.uri">fhir:StructureDefinition.mapping.uri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/object-implementation" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.name">fhir:StructureDefinition.mapping.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Object Implementation Information" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "ActivityDefinition"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "ActivityDefinition"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.baseDefinition">fhir:StructureDefinition.baseDefinition</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/ActivityDefinition"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/ActivityDefinition> - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot">fhir:StructureDefinition.snapshot</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot.element">fhir:StructureDefinition.snapshot.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2812,7 +2812,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.identity">fhir:ElementDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "rim" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.map">fhir:ElementDefinition.mapping.map</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "N/A" ] ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential">fhir:StructureDefinition.differential</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential.element">fhir:StructureDefinition.differential.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2822,7 +2822,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.id">fhir:Element.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ActivityDefinition.code" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.path">fhir:ElementDefinition.path</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ActivityDefinition.code" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.min">fhir:ElementDefinition.min</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "1"^^xsd:nonNegativeInteger ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -2884,7 +2884,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - TTL Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-table.profile.xml.html b/StructureDefinition-study-data-dictionary-table.profile.xml.html index 92e366c3..80937961 100644 --- a/StructureDefinition-study-data-dictionary-table.profile.xml.html +++ b/StructureDefinition-study-data-dictionary-table.profile.xml.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - XML Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -343,7 +343,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - XML Profile</h2> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="StudyDataDictionaryTable"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI Study Data Dictionary Data Table"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> - <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -3008,7 +3008,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryTable - XML Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-table.ttl b/StructureDefinition-study-data-dictionary-table.ttl index 6c943a0b..77f08d3b 100644 --- a/StructureDefinition-study-data-dictionary-table.ttl +++ b/StructureDefinition-study-data-dictionary-table.ttl @@ -7,11 +7,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-table> a fhir:StructureDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "study-data-dictionary-table"]; + fhir:Resource.id [ fhir:value "study-data-dictionary-table"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-data-dictionary-table-definitions.html#ActivityDefinition\">ActivityDefinition</a><a name=\"ActivityDefinition\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/activitydefinition.html\">ActivityDefinition</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">The definition of a specific activity to be taken, independent of any particular patient or context</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-data-dictionary-table-definitions.html#ActivityDefinition.code\">code</a><a name=\"ActivityDefinition.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Detail type of activity</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -20,14 +20,14 @@ fhir:index 1; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; fhir:Extension.valueCode [ fhir:value "anonymous" ] - ]; - fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-table"]; - fhir:StructureDefinition.version [ fhir:value "0.2.0"]; - fhir:StructureDefinition.name [ fhir:value "StudyDataDictionaryTable"]; - fhir:StructureDefinition.title [ fhir:value "NCPI Study Data Dictionary Data Table"]; - fhir:StructureDefinition.status [ fhir:value "draft"]; - fhir:StructureDefinition.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-table"]; # + fhir:StructureDefinition.version [ fhir:value "0.2.0"]; # + fhir:StructureDefinition.name [ fhir:value "StudyDataDictionaryTable"]; # + fhir:StructureDefinition.title [ fhir:value "NCPI Study Data Dictionary Data Table"]; # + fhir:StructureDefinition.status [ fhir:value "draft"]; # + fhir:StructureDefinition.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:StructureDefinition.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -45,9 +45,9 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:StructureDefinition.description [ fhir:value "Aggregates Variable Details associated with a single dataset table that are represented in FHIR as as list of references to StudyDataDictionaryVariables in the *observationResultRequirement* property."]; - fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; + ]; # + fhir:StructureDefinition.description [ fhir:value "Aggregates Variable Details associated with a single dataset table that are represented in FHIR as as list of references to StudyDataDictionaryVariables in the *observationResultRequirement* property."]; # + fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; # fhir:StructureDefinition.mapping [ fhir:index 0; fhir:StructureDefinition.mapping.identity [ fhir:value "workflow" ]; @@ -68,15 +68,15 @@ fhir:StructureDefinition.mapping.identity [ fhir:value "objimpl" ]; fhir:StructureDefinition.mapping.uri [ fhir:value "http://hl7.org/fhir/object-implementation" ]; fhir:StructureDefinition.mapping.name [ fhir:value "Object Implementation Information" ] - ]; - fhir:StructureDefinition.kind [ fhir:value "resource"]; - fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; - fhir:StructureDefinition.type [ fhir:value "ActivityDefinition"]; + ]; # + fhir:StructureDefinition.kind [ fhir:value "resource"]; # + fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; # + fhir:StructureDefinition.type [ fhir:value "ActivityDefinition"]; # fhir:StructureDefinition.baseDefinition [ fhir:value "http://hl7.org/fhir/StructureDefinition/ActivityDefinition"; fhir:link <http://hl7.org/fhir/StructureDefinition/ActivityDefinition> - ]; - fhir:StructureDefinition.derivation [ fhir:value "constraint"]; + ]; # + fhir:StructureDefinition.derivation [ fhir:value "constraint"]; # fhir:StructureDefinition.snapshot [ fhir:StructureDefinition.snapshot.element [ fhir:index 0; @@ -3011,7 +3011,7 @@ fhir:ElementDefinition.mapping.map [ fhir:value "N/A" ] ] ] - ]; + ]; # fhir:StructureDefinition.differential [ fhir:StructureDefinition.differential.element [ fhir:index 0; @@ -3023,7 +3023,7 @@ fhir:ElementDefinition.path [ fhir:value "ActivityDefinition.code" ]; fhir:ElementDefinition.min [ fhir:value "1"^^xsd:nonNegativeInteger ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/StructureDefinition-study-data-dictionary-table.xlsx b/StructureDefinition-study-data-dictionary-table.xlsx index 1baea268..6b01aa2a 100644 Binary files a/StructureDefinition-study-data-dictionary-table.xlsx and b/StructureDefinition-study-data-dictionary-table.xlsx differ diff --git a/StructureDefinition-study-data-dictionary-table.xml b/StructureDefinition-study-data-dictionary-table.xml index 20f870ad..fd7ec5c7 100644 --- a/StructureDefinition-study-data-dictionary-table.xml +++ b/StructureDefinition-study-data-dictionary-table.xml @@ -18,7 +18,7 @@ <name value="StudyDataDictionaryTable"/> <title value="NCPI Study Data Dictionary Data Table"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/StructureDefinition-study-data-dictionary-variable-definitions.html b/StructureDefinition-study-data-dictionary-variable-definitions.html index 8c9073ee..fb5e5e68 100644 --- a/StructureDefinition-study-data-dictionary-variable-definitions.html +++ b/StructureDefinition-study-data-dictionary-variable-definitions.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Detailed Descripti Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -327,14 +327,16 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Detailed Descripti </ul> <a name="tabs-diff"> </a> <div id="tabs-diff"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_ObservationDefinition"> </a><span style="color: grey">1.</span> <b>ObservationDefinition</b><a href="#diff_ObservationDefinition" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> </table> </div> <a name="tabs-key"> </a> <div id="tabs-key"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="key_ObservationDefinition"> </a><span style="color: grey">1.</span> <b>ObservationDefinition</b><a href="#key_ObservationDefinition" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><span style='color:DarkGray'><p>Set of definitional characteristics for a kind of observation or measurement produced or consumed by an orderable health care service.</p> </span></td></tr> @@ -384,7 +386,8 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Detailed Descripti </div> <a name="tabs-snap"> </a> <div id="tabs-snap"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ObservationDefinition"> </a><span style="color: grey">1.</span> <b>ObservationDefinition</b><a href="#ObservationDefinition" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>Set of definitional characteristics for a kind of observation or measurement produced or consumed by an orderable health care service.</p> </td></tr> @@ -432,7 +435,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Detailed Descripti </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#Narrative">Narrative</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrativehtmlxhtmldisplay</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrative, html, xhtml, display</td></tr> <tr><td>Comments</td><td><p>Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a "text blob" or where text is additionally entered raw or narrated and encoded information is added later.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -442,7 +445,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Detailed Descripti </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/resource.html">Resource</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resourcesanonymous resourcescontained resources</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resources, anonymous resources, contained resources</td></tr> <tr><td>Comments</td><td><p>This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ObservationDefinition.extension"> </a><span style="color: grey">8.</span> <b>ObservationDefinition.extension</b><a href="#ObservationDefinition.extension" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -450,7 +453,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Detailed Descripti </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -464,7 +467,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Detailed Descripti <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -567,7 +570,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Detailed Descripti </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -581,7 +584,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Detailed Descripti <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -638,7 +641,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Detailed Descripti </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -652,7 +655,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Detailed Descripti <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -739,28 +742,28 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Detailed Descripti <tr><td>Definition</td><td><p>The set of valid coded results for the observations conforming to this ObservationDefinition.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/valueset.html" title="http://hl7.org/fhir/StructureDefinition/ValueSet">ValueSet</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/valueset.html" title="http://hl7.org/fhir/StructureDefinition/ValueSet">ValueSet</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ObservationDefinition.normalCodedValueSet"> </a><span style="color: grey">38.</span> <b>ObservationDefinition.normalCodedValueSet</b><a href="#ObservationDefinition.normalCodedValueSet" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>The set of normal coded results for the observations conforming to this ObservationDefinition.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/valueset.html" title="http://hl7.org/fhir/StructureDefinition/ValueSet">ValueSet</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/valueset.html" title="http://hl7.org/fhir/StructureDefinition/ValueSet">ValueSet</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ObservationDefinition.abnormalCodedValueSet"> </a><span style="color: grey">39.</span> <b>ObservationDefinition.abnormalCodedValueSet</b><a href="#ObservationDefinition.abnormalCodedValueSet" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>The set of abnormal coded results for the observation conforming to this ObservationDefinition.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/valueset.html" title="http://hl7.org/fhir/StructureDefinition/ValueSet">ValueSet</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/valueset.html" title="http://hl7.org/fhir/StructureDefinition/ValueSet">ValueSet</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="ObservationDefinition.criticalCodedValueSet"> </a><span style="color: grey">40.</span> <b>ObservationDefinition.criticalCodedValueSet</b><a href="#ObservationDefinition.criticalCodedValueSet" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>The set of critical coded results for the observation conforming to this ObservationDefinition.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/valueset.html" title="http://hl7.org/fhir/StructureDefinition/ValueSet">ValueSet</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/valueset.html" title="http://hl7.org/fhir/StructureDefinition/ValueSet">ValueSet</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> </table> @@ -819,7 +822,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Detailed Descripti <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-variable-examples.html b/StructureDefinition-study-data-dictionary-variable-examples.html index ae15b47d..d3f30ded 100644 --- a/StructureDefinition-study-data-dictionary-variable-examples.html +++ b/StructureDefinition-study-data-dictionary-variable-examples.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Examples</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -402,7 +402,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Examples</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-variable-mappings.html b/StructureDefinition-study-data-dictionary-variable-mappings.html index 950af21c..2023bbf5 100644 --- a/StructureDefinition-study-data-dictionary-variable-mappings.html +++ b/StructureDefinition-study-data-dictionary-variable-mappings.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Mappings</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -420,7 +420,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Mappings</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-variable-note.html b/StructureDefinition-study-data-dictionary-variable-note.html index e88145da..f4aafaaa 100644 --- a/StructureDefinition-study-data-dictionary-variable-note.html +++ b/StructureDefinition-study-data-dictionary-variable-note.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -263,7 +263,7 @@ <h2>Structure Definition Study Data Dictionary Variable Note</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-variable-testing.html b/StructureDefinition-study-data-dictionary-variable-testing.html index d78fd00d..1d9a79ec 100644 --- a/StructureDefinition-study-data-dictionary-variable-testing.html +++ b/StructureDefinition-study-data-dictionary-variable-testing.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Testing</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -362,7 +362,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Testing</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-variable.html b/StructureDefinition-study-data-dictionary-variable.html index c8dd4a3b..d027cb31 100644 --- a/StructureDefinition-study-data-dictionary-variable.html +++ b/StructureDefinition-study-data-dictionary-variable.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -321,7 +321,7 @@ <h2 id="root">Resource Profile: Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -960,7 +960,7 @@ <h4>Constraints</h4> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-variable.json b/StructureDefinition-study-data-dictionary-variable.json index 9ebdd620..8168fd52 100644 --- a/StructureDefinition-study-data-dictionary-variable.json +++ b/StructureDefinition-study-data-dictionary-variable.json @@ -1,1819 +1,1517 @@ -{ - "resourceType": "StructureDefinition", - "id": "study-data-dictionary-variable", - "text": { - "status": "extensions", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck0.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-data-dictionary-variable-definitions.html#ObservationDefinition\">ObservationDefinition</a><a name=\"ObservationDefinition\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observationdefinition.html\">ObservationDefinition</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Definition of an observation</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - }, - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", - "valueString": "Specialized.Definitional Artifacts" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", - "valueCode": "business" - } - ], - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable", - "version": "0.2.0", - "name": "StudyDataDictionaryVariable", - "title": "NCPI Study Data Dictionary Data Variable", - "status": "draft", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "FHIR profile used to describe single variable from the dataset. This resource should be as complete as possible including details such as *description*, *data-type*, *permitted enumerations*, *quantity units*, etc.", - "fhirVersion": "4.0.1", - "mapping": [ - { - "identity": "v2", - "uri": "http://hl7.org/v2", - "name": "HL7 v2 Mapping" - }, - { - "identity": "rim", - "uri": "http://hl7.org/v3", - "name": "RIM Mapping" - }, - { - "identity": "w5", - "uri": "http://hl7.org/fhir/fivews", - "name": "FiveWs Pattern Mapping" - } - ], - "kind": "resource", - "abstract": false, - "type": "ObservationDefinition", - "baseDefinition": "http://hl7.org/fhir/StructureDefinition/ObservationDefinition", - "derivation": "constraint", - "snapshot": { - "element": [ - { - "id": "ObservationDefinition", - "path": "ObservationDefinition", - "short": "Definition of an observation", - "definition": "Set of definitional characteristics for a kind of observation or measurement produced or consumed by an orderable health care service.", - "comment": "An instance of this resource informs the consumer of a health-related service (such as a lab diagnostic test or panel) about how the observations used or produced by this service will look like.", - "min": 0, - "max": "*", - "base": { - "path": "ObservationDefinition", - "min": 0, - "max": "*" - }, - "constraint": [ - { - "key": "dom-2", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL NOT contain nested Resources", - "expression": "contained.contained.empty()", - "xpath": "not(parent::f:contained and f:contained)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-3", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", - "expression": "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", - "xpath": "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-4", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", - "expression": "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-5", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a security label", - "expression": "contained.meta.security.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:security))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", - "valueBoolean": true - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", - "valueMarkdown": "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." - } - ], - "key": "dom-6", - "severity": "warning", - "human": "A resource should have narrative for robust management", - "expression": "text.`div`.exists()", - "xpath": "exists(f:text/h:div)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Entity. Role, or Act" - }, - { - "identity": "v2", - "map": "OM2\nOM3\nOMC" - }, - { - "identity": "rim", - "map": "Observation[classCode=OBS, moodCode=DEF]" - } - ] - }, - { - "id": "ObservationDefinition.id", - "path": "ObservationDefinition.id", - "short": "Logical id of this artifact", - "definition": "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", - "comment": "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "id" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "ObservationDefinition.meta", - "path": "ObservationDefinition.meta", - "short": "Metadata about the resource", - "definition": "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.meta", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Meta" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "ObservationDefinition.implicitRules", - "path": "ObservationDefinition.implicitRules", - "short": "A set of rules under which this content was created", - "definition": "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", - "comment": "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.implicitRules", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", - "isSummary": true - }, - { - "id": "ObservationDefinition.language", - "path": "ObservationDefinition.language", - "short": "Language of the resource content", - "definition": "The base language in which the resource is written.", - "comment": "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", - "min": 0, - "max": "1", - "base": { - "path": "Resource.language", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", - "valueCanonical": "http://hl7.org/fhir/ValueSet/all-languages" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "Language" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "preferred", - "description": "A human language.", - "valueSet": "http://hl7.org/fhir/ValueSet/languages" - } - }, - { - "id": "ObservationDefinition.text", - "path": "ObservationDefinition.text", - "short": "Text summary of the resource, for human interpretation", - "definition": "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", - "comment": "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", - "alias": [ - "narrative", - "html", - "xhtml", - "display" - ], - "min": 0, - "max": "1", - "base": { - "path": "DomainResource.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Narrative" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Act.text?" - } - ] - }, - { - "id": "ObservationDefinition.contained", - "path": "ObservationDefinition.contained", - "short": "Contained, inline Resources", - "definition": "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", - "comment": "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", - "alias": [ - "inline resources", - "anonymous resources", - "contained resources" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.contained", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Resource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ObservationDefinition.extension", - "path": "ObservationDefinition.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ObservationDefinition.modifierExtension", - "path": "ObservationDefinition.modifierExtension", - "short": "Extensions that cannot be ignored", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ObservationDefinition.category", - "path": "ObservationDefinition.category", - "short": "Category of observation", - "definition": "A code that classifies the general type of observation.", - "comment": "This element allows various categorization schemes based on the owner’s definition of the category and effectively multiple categories can be used for one instance of ObservationDefinition. The level of granularity is defined by the category concepts in the value set.", - "requirements": "Used for filtering what kinds of observations are retrieved and displayed.", - "alias": [ - "Class of observation" - ], - "min": 0, - "max": "*", - "base": { - "path": "ObservationDefinition.category", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationCategory" - } - ], - "strength": "example", - "description": "Codes for high level observation categories.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-category" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.class" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=\"COMP].target[classCode=\"LIST\", moodCode=\"DEF\"].code" - } - ] - }, - { - "id": "ObservationDefinition.code", - "path": "ObservationDefinition.code", - "short": "Type of observation (code / type)", - "definition": "Describes what will be observed. Sometimes this is called the observation \"name\".", - "requirements": "Knowing what kind of observation is being made is essential to understanding the observation.", - "alias": [ - "Name" - ], - "min": 1, - "max": "1", - "base": { - "path": "ObservationDefinition.code", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationCode" - } - ], - "strength": "example", - "description": "Codes identifying names of simple observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-codes" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.what[x]" - }, - { - "identity": "v2", - "map": "OM1-2\nOMC-4" - }, - { - "identity": "rim", - "map": "code" - } - ] - }, - { - "id": "ObservationDefinition.identifier", - "path": "ObservationDefinition.identifier", - "short": "Business identifier for this ObservationDefinition instance", - "definition": "A unique identifier assigned to this ObservationDefinition artifact.", - "min": 0, - "max": "*", - "base": { - "path": "ObservationDefinition.identifier", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Identifier" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "ObservationDefinition.permittedDataType", - "path": "ObservationDefinition.permittedDataType", - "short": "Quantity | CodeableConcept | string | boolean | integer | Range | Ratio | SampledData | time | dateTime | Period", - "definition": "The data types allowed for the value element of the instance observations conforming to this ObservationDefinition.", - "min": 0, - "max": "*", - "base": { - "path": "ObservationDefinition.permittedDataType", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "code" - } - ], - "example": [ - { - "label": "General", - "valueCode": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationDataType" - } - ], - "strength": "required", - "description": "Permitted data type for observation value.", - "valueSet": "http://hl7.org/fhir/ValueSet/permitted-data-type|4.0.1" - }, - "mapping": [ - { - "identity": "v2", - "map": "OM1-3" - } - ] - }, - { - "id": "ObservationDefinition.multipleResultsAllowed", - "path": "ObservationDefinition.multipleResultsAllowed", - "short": "Multiple results allowed", - "definition": "Multiple results allowed for observations conforming to this ObservationDefinition.", - "comment": "An example of observation allowing multiple results is \"bacteria identified by culture\". Conversely, the measurement of a potassium level allows a single result.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.multipleResultsAllowed", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "boolean" - } - ], - "example": [ - { - "label": "General", - "valueBoolean": true - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "ObservationDefinition.method", - "path": "ObservationDefinition.method", - "short": "Method used to produce the observation", - "definition": "The method or technique used to perform the observation.", - "comment": "Only used if not implicit in observation code.", - "requirements": "In some cases, method can impact results.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.method", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationMethod" - } - ], - "strength": "example", - "description": "Methods for simple observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-methods" - }, - "mapping": [ - { - "identity": "v2", - "map": "OM1-14" - }, - { - "identity": "rim", - "map": "methodCode" - } - ] - }, - { - "id": "ObservationDefinition.preferredReportName", - "path": "ObservationDefinition.preferredReportName", - "short": "Preferred report name", - "definition": "The preferred name to be used when reporting the results of observations conforming to this ObservationDefinition.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.preferredReportName", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OM1-9" - } - ] - }, - { - "id": "ObservationDefinition.quantitativeDetails", - "path": "ObservationDefinition.quantitativeDetails", - "short": "Characteristics of quantitative results", - "definition": "Characteristics for quantitative results of this observation.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.quantitativeDetails", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OM2" - } - ] - }, - { - "id": "ObservationDefinition.quantitativeDetails.id", - "path": "ObservationDefinition.quantitativeDetails.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ObservationDefinition.quantitativeDetails.extension", - "path": "ObservationDefinition.quantitativeDetails.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ObservationDefinition.quantitativeDetails.modifierExtension", - "path": "ObservationDefinition.quantitativeDetails.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ObservationDefinition.quantitativeDetails.customaryUnit", - "path": "ObservationDefinition.quantitativeDetails.customaryUnit", - "short": "Customary unit for quantitative results", - "definition": "Customary unit used to report quantitative results of observations conforming to this ObservationDefinition.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.quantitativeDetails.customaryUnit", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationUnit" - } - ], - "strength": "extensible", - "description": "Codes identifying units of measure.", - "valueSet": "http://hl7.org/fhir/ValueSet/ucum-units" - }, - "mapping": [ - { - "identity": "v2", - "map": "OM2-2" - } - ] - }, - { - "id": "ObservationDefinition.quantitativeDetails.unit", - "path": "ObservationDefinition.quantitativeDetails.unit", - "short": "SI unit for quantitative results", - "definition": "SI unit used to report quantitative results of observations conforming to this ObservationDefinition.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.quantitativeDetails.unit", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationUnit" - } - ], - "strength": "extensible", - "description": "Codes identifying units of measure.", - "valueSet": "http://hl7.org/fhir/ValueSet/ucum-units" - }, - "mapping": [ - { - "identity": "v2", - "map": "OM2-4" - } - ] - }, - { - "id": "ObservationDefinition.quantitativeDetails.conversionFactor", - "path": "ObservationDefinition.quantitativeDetails.conversionFactor", - "short": "SI to Customary unit conversion factor", - "definition": "Factor for converting value expressed with SI unit to value expressed with customary unit.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.quantitativeDetails.conversionFactor", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "decimal" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OM2-5" - } - ] - }, - { - "id": "ObservationDefinition.quantitativeDetails.decimalPrecision", - "path": "ObservationDefinition.quantitativeDetails.decimalPrecision", - "short": "Decimal precision of observation quantitative results", - "definition": "Number of digits after decimal separator when the results of such observations are of type Quantity.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.quantitativeDetails.decimalPrecision", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "integer" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OM2-3" - } - ] - }, - { - "id": "ObservationDefinition.qualifiedInterval", - "path": "ObservationDefinition.qualifiedInterval", - "short": "Qualified range for continuous and ordinal observation results", - "definition": "Multiple ranges of results qualified by different contexts for ordinal or continuous observations conforming to this ObservationDefinition.", - "min": 0, - "max": "*", - "base": { - "path": "ObservationDefinition.qualifiedInterval", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OM2-6" - } - ] - }, - { - "id": "ObservationDefinition.qualifiedInterval.id", - "path": "ObservationDefinition.qualifiedInterval.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ObservationDefinition.qualifiedInterval.extension", - "path": "ObservationDefinition.qualifiedInterval.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "ObservationDefinition.qualifiedInterval.modifierExtension", - "path": "ObservationDefinition.qualifiedInterval.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "ObservationDefinition.qualifiedInterval.category", - "path": "ObservationDefinition.qualifiedInterval.category", - "short": "reference | critical | absolute", - "definition": "The category of interval of values for continuous or ordinal observations conforming to this ObservationDefinition.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.qualifiedInterval.category", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "example": [ - { - "label": "General", - "valueCode": "critical" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationRangeCategory" - } - ], - "strength": "required", - "description": "Codes identifying the category of observation range.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-range-category|4.0.1" - }, - "mapping": [ - { - "identity": "v2", - "map": "OM-2" - } - ] - }, - { - "id": "ObservationDefinition.qualifiedInterval.range", - "path": "ObservationDefinition.qualifiedInterval.range", - "short": "The interval itself, for continuous or ordinal observations", - "definition": "The low and high values determining the interval. There may be only one of the two.", - "requirements": "The unit may be not relevant for ordinal values. In case it is there, it is the same as quantitativeDetails.unit.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.qualifiedInterval.range", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Range" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OM-2" - } - ] - }, - { - "id": "ObservationDefinition.qualifiedInterval.context", - "path": "ObservationDefinition.qualifiedInterval.context", - "short": "Range context qualifier", - "definition": "Codes to indicate the health context the range applies to. For example, the normal or therapeutic range.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.qualifiedInterval.context", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationRangeMeaning" - } - ], - "strength": "extensible", - "description": "Code identifying the health context of a range.", - "valueSet": "http://hl7.org/fhir/ValueSet/referencerange-meaning" - }, - "mapping": [ - { - "identity": "v2", - "map": "n.a." - } - ] - }, - { - "id": "ObservationDefinition.qualifiedInterval.appliesTo", - "path": "ObservationDefinition.qualifiedInterval.appliesTo", - "short": "Targetted population of the range", - "definition": "Codes to indicate the target population this reference range applies to.", - "comment": "If this element is not present then the global population is assumed.", - "min": 0, - "max": "*", - "base": { - "path": "ObservationDefinition.qualifiedInterval.appliesTo", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationRangeAppliesTo" - } - ], - "strength": "example", - "description": "Codes identifying the population the reference range applies to.", - "valueSet": "http://hl7.org/fhir/ValueSet/referencerange-appliesto" - }, - "mapping": [ - { - "identity": "v2", - "map": "RFR.6" - } - ] - }, - { - "id": "ObservationDefinition.qualifiedInterval.gender", - "path": "ObservationDefinition.qualifiedInterval.gender", - "short": "male | female | other | unknown", - "definition": "Sex of the population the range applies to.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.qualifiedInterval.gender", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "example": [ - { - "label": "General", - "valueCode": "female" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "AdministrativeGender" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "required", - "description": "The gender of a person used for administrative purposes.", - "valueSet": "http://hl7.org/fhir/ValueSet/administrative-gender|4.0.1" - }, - "mapping": [ - { - "identity": "v2", - "map": "RFR.2" - } - ] - }, - { - "id": "ObservationDefinition.qualifiedInterval.age", - "path": "ObservationDefinition.qualifiedInterval.age", - "short": "Applicable age range, if relevant", - "definition": "The age at which this reference range is applicable. This is a neonatal age (e.g. number of weeks at term) if the meaning says so.", - "comment": "Some analytes vary greatly over age.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.qualifiedInterval.age", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Range" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "RFR.3" - } - ] - }, - { - "id": "ObservationDefinition.qualifiedInterval.gestationalAge", - "path": "ObservationDefinition.qualifiedInterval.gestationalAge", - "short": "Applicable gestational age range, if relevant", - "definition": "The gestational age to which this reference range is applicable, in the context of pregnancy.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.qualifiedInterval.gestationalAge", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Range" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "RFR.4" - } - ] - }, - { - "id": "ObservationDefinition.qualifiedInterval.condition", - "path": "ObservationDefinition.qualifiedInterval.condition", - "short": "Condition associated with the reference range", - "definition": "Text based condition for which the reference range is valid.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.qualifiedInterval.condition", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "RFR.7" - } - ] - }, - { - "id": "ObservationDefinition.validCodedValueSet", - "path": "ObservationDefinition.validCodedValueSet", - "short": "Value set of valid coded values for the observations conforming to this ObservationDefinition", - "definition": "The set of valid coded results for the observations conforming to this ObservationDefinition.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.validCodedValueSet", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/ValueSet" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OM3-3" - } - ] - }, - { - "id": "ObservationDefinition.normalCodedValueSet", - "path": "ObservationDefinition.normalCodedValueSet", - "short": "Value set of normal coded values for the observations conforming to this ObservationDefinition", - "definition": "The set of normal coded results for the observations conforming to this ObservationDefinition.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.normalCodedValueSet", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/ValueSet" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OM3-4" - } - ] - }, - { - "id": "ObservationDefinition.abnormalCodedValueSet", - "path": "ObservationDefinition.abnormalCodedValueSet", - "short": "Value set of abnormal coded values for the observations conforming to this ObservationDefinition", - "definition": "The set of abnormal coded results for the observation conforming to this ObservationDefinition.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.abnormalCodedValueSet", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/ValueSet" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OM3-5" - } - ] - }, - { - "id": "ObservationDefinition.criticalCodedValueSet", - "path": "ObservationDefinition.criticalCodedValueSet", - "short": "Value set of critical coded values for the observations conforming to this ObservationDefinition", - "definition": "The set of critical coded results for the observation conforming to this ObservationDefinition.", - "min": 0, - "max": "1", - "base": { - "path": "ObservationDefinition.criticalCodedValueSet", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/ValueSet" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OM3-6" - } - ] - } - ] - }, - "differential": { - "element": [ - { - "id": "ObservationDefinition", - "path": "ObservationDefinition" - } - ] - } +{ + "resourceType" : "StructureDefinition", + "id" : "study-data-dictionary-variable", + "text" : { + "status" : "extensions", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck0.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-data-dictionary-variable-definitions.html#ObservationDefinition\">ObservationDefinition</a><a name=\"ObservationDefinition\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observationdefinition.html\">ObservationDefinition</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Definition of an observation</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" + }, + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", + "valueString" : "Specialized.Definitional Artifacts" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", + "valueCode" : "business" + }], + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable", + "version" : "0.2.0", + "name" : "StudyDataDictionaryVariable", + "title" : "NCPI Study Data Dictionary Data Variable", + "status" : "draft", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "FHIR profile used to describe single variable from the dataset. This resource should be as complete as possible including details such as *description*, *data-type*, *permitted enumerations*, *quantity units*, etc.", + "fhirVersion" : "4.0.1", + "mapping" : [{ + "identity" : "v2", + "uri" : "http://hl7.org/v2", + "name" : "HL7 v2 Mapping" + }, + { + "identity" : "rim", + "uri" : "http://hl7.org/v3", + "name" : "RIM Mapping" + }, + { + "identity" : "w5", + "uri" : "http://hl7.org/fhir/fivews", + "name" : "FiveWs Pattern Mapping" + }], + "kind" : "resource", + "abstract" : false, + "type" : "ObservationDefinition", + "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/ObservationDefinition", + "derivation" : "constraint", + "snapshot" : { + "element" : [{ + "id" : "ObservationDefinition", + "path" : "ObservationDefinition", + "short" : "Definition of an observation", + "definition" : "Set of definitional characteristics for a kind of observation or measurement produced or consumed by an orderable health care service.", + "comment" : "An instance of this resource informs the consumer of a health-related service (such as a lab diagnostic test or panel) about how the observations used or produced by this service will look like.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ObservationDefinition", + "min" : 0, + "max" : "*" + }, + "constraint" : [{ + "key" : "dom-2", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL NOT contain nested Resources", + "expression" : "contained.contained.empty()", + "xpath" : "not(parent::f:contained and f:contained)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-3", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", + "expression" : "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", + "xpath" : "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-4", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", + "expression" : "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-5", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a security label", + "expression" : "contained.meta.security.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:security))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", + "valueBoolean" : true + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", + "valueMarkdown" : "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." + }], + "key" : "dom-6", + "severity" : "warning", + "human" : "A resource should have narrative for robust management", + "expression" : "text.`div`.exists()", + "xpath" : "exists(f:text/h:div)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Entity. Role, or Act" + }, + { + "identity" : "v2", + "map" : "OM2\nOM3\nOMC" + }, + { + "identity" : "rim", + "map" : "Observation[classCode=OBS, moodCode=DEF]" + }] + }, + { + "id" : "ObservationDefinition.id", + "path" : "ObservationDefinition.id", + "short" : "Logical id of this artifact", + "definition" : "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", + "comment" : "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "id" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "ObservationDefinition.meta", + "path" : "ObservationDefinition.meta", + "short" : "Metadata about the resource", + "definition" : "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.meta", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Meta" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "ObservationDefinition.implicitRules", + "path" : "ObservationDefinition.implicitRules", + "short" : "A set of rules under which this content was created", + "definition" : "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", + "comment" : "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.implicitRules", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", + "isSummary" : true + }, + { + "id" : "ObservationDefinition.language", + "path" : "ObservationDefinition.language", + "short" : "Language of the resource content", + "definition" : "The base language in which the resource is written.", + "comment" : "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.language", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", + "valueCanonical" : "http://hl7.org/fhir/ValueSet/all-languages" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "Language" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "preferred", + "description" : "A human language.", + "valueSet" : "http://hl7.org/fhir/ValueSet/languages" + } + }, + { + "id" : "ObservationDefinition.text", + "path" : "ObservationDefinition.text", + "short" : "Text summary of the resource, for human interpretation", + "definition" : "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", + "comment" : "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", + "alias" : ["narrative", + "html", + "xhtml", + "display"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "DomainResource.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Narrative" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Act.text?" + }] + }, + { + "id" : "ObservationDefinition.contained", + "path" : "ObservationDefinition.contained", + "short" : "Contained, inline Resources", + "definition" : "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", + "comment" : "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", + "alias" : ["inline resources", + "anonymous resources", + "contained resources"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.contained", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Resource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ObservationDefinition.extension", + "path" : "ObservationDefinition.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ObservationDefinition.modifierExtension", + "path" : "ObservationDefinition.modifierExtension", + "short" : "Extensions that cannot be ignored", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ObservationDefinition.category", + "path" : "ObservationDefinition.category", + "short" : "Category of observation", + "definition" : "A code that classifies the general type of observation.", + "comment" : "This element allows various categorization schemes based on the owner’s definition of the category and effectively multiple categories can be used for one instance of ObservationDefinition. The level of granularity is defined by the category concepts in the value set.", + "requirements" : "Used for filtering what kinds of observations are retrieved and displayed.", + "alias" : ["Class of observation"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "ObservationDefinition.category", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationCategory" + }], + "strength" : "example", + "description" : "Codes for high level observation categories.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-category" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.class" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=\"COMP].target[classCode=\"LIST\", moodCode=\"DEF\"].code" + }] + }, + { + "id" : "ObservationDefinition.code", + "path" : "ObservationDefinition.code", + "short" : "Type of observation (code / type)", + "definition" : "Describes what will be observed. Sometimes this is called the observation \"name\".", + "requirements" : "Knowing what kind of observation is being made is essential to understanding the observation.", + "alias" : ["Name"], + "min" : 1, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.code", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationCode" + }], + "strength" : "example", + "description" : "Codes identifying names of simple observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-codes" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.what[x]" + }, + { + "identity" : "v2", + "map" : "OM1-2\nOMC-4" + }, + { + "identity" : "rim", + "map" : "code" + }] + }, + { + "id" : "ObservationDefinition.identifier", + "path" : "ObservationDefinition.identifier", + "short" : "Business identifier for this ObservationDefinition instance", + "definition" : "A unique identifier assigned to this ObservationDefinition artifact.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ObservationDefinition.identifier", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Identifier" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "ObservationDefinition.permittedDataType", + "path" : "ObservationDefinition.permittedDataType", + "short" : "Quantity | CodeableConcept | string | boolean | integer | Range | Ratio | SampledData | time | dateTime | Period", + "definition" : "The data types allowed for the value element of the instance observations conforming to this ObservationDefinition.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ObservationDefinition.permittedDataType", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "code" + }], + "example" : [{ + "label" : "General", + "valueCode" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationDataType" + }], + "strength" : "required", + "description" : "Permitted data type for observation value.", + "valueSet" : "http://hl7.org/fhir/ValueSet/permitted-data-type|4.0.1" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "OM1-3" + }] + }, + { + "id" : "ObservationDefinition.multipleResultsAllowed", + "path" : "ObservationDefinition.multipleResultsAllowed", + "short" : "Multiple results allowed", + "definition" : "Multiple results allowed for observations conforming to this ObservationDefinition.", + "comment" : "An example of observation allowing multiple results is \"bacteria identified by culture\". Conversely, the measurement of a potassium level allows a single result.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.multipleResultsAllowed", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "boolean" + }], + "example" : [{ + "label" : "General", + "valueBoolean" : true + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "ObservationDefinition.method", + "path" : "ObservationDefinition.method", + "short" : "Method used to produce the observation", + "definition" : "The method or technique used to perform the observation.", + "comment" : "Only used if not implicit in observation code.", + "requirements" : "In some cases, method can impact results.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.method", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationMethod" + }], + "strength" : "example", + "description" : "Methods for simple observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-methods" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "OM1-14" + }, + { + "identity" : "rim", + "map" : "methodCode" + }] + }, + { + "id" : "ObservationDefinition.preferredReportName", + "path" : "ObservationDefinition.preferredReportName", + "short" : "Preferred report name", + "definition" : "The preferred name to be used when reporting the results of observations conforming to this ObservationDefinition.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.preferredReportName", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OM1-9" + }] + }, + { + "id" : "ObservationDefinition.quantitativeDetails", + "path" : "ObservationDefinition.quantitativeDetails", + "short" : "Characteristics of quantitative results", + "definition" : "Characteristics for quantitative results of this observation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.quantitativeDetails", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OM2" + }] + }, + { + "id" : "ObservationDefinition.quantitativeDetails.id", + "path" : "ObservationDefinition.quantitativeDetails.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ObservationDefinition.quantitativeDetails.extension", + "path" : "ObservationDefinition.quantitativeDetails.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ObservationDefinition.quantitativeDetails.modifierExtension", + "path" : "ObservationDefinition.quantitativeDetails.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ObservationDefinition.quantitativeDetails.customaryUnit", + "path" : "ObservationDefinition.quantitativeDetails.customaryUnit", + "short" : "Customary unit for quantitative results", + "definition" : "Customary unit used to report quantitative results of observations conforming to this ObservationDefinition.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.quantitativeDetails.customaryUnit", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationUnit" + }], + "strength" : "extensible", + "description" : "Codes identifying units of measure.", + "valueSet" : "http://hl7.org/fhir/ValueSet/ucum-units" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "OM2-2" + }] + }, + { + "id" : "ObservationDefinition.quantitativeDetails.unit", + "path" : "ObservationDefinition.quantitativeDetails.unit", + "short" : "SI unit for quantitative results", + "definition" : "SI unit used to report quantitative results of observations conforming to this ObservationDefinition.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.quantitativeDetails.unit", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationUnit" + }], + "strength" : "extensible", + "description" : "Codes identifying units of measure.", + "valueSet" : "http://hl7.org/fhir/ValueSet/ucum-units" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "OM2-4" + }] + }, + { + "id" : "ObservationDefinition.quantitativeDetails.conversionFactor", + "path" : "ObservationDefinition.quantitativeDetails.conversionFactor", + "short" : "SI to Customary unit conversion factor", + "definition" : "Factor for converting value expressed with SI unit to value expressed with customary unit.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.quantitativeDetails.conversionFactor", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "decimal" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OM2-5" + }] + }, + { + "id" : "ObservationDefinition.quantitativeDetails.decimalPrecision", + "path" : "ObservationDefinition.quantitativeDetails.decimalPrecision", + "short" : "Decimal precision of observation quantitative results", + "definition" : "Number of digits after decimal separator when the results of such observations are of type Quantity.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.quantitativeDetails.decimalPrecision", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "integer" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OM2-3" + }] + }, + { + "id" : "ObservationDefinition.qualifiedInterval", + "path" : "ObservationDefinition.qualifiedInterval", + "short" : "Qualified range for continuous and ordinal observation results", + "definition" : "Multiple ranges of results qualified by different contexts for ordinal or continuous observations conforming to this ObservationDefinition.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ObservationDefinition.qualifiedInterval", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OM2-6" + }] + }, + { + "id" : "ObservationDefinition.qualifiedInterval.id", + "path" : "ObservationDefinition.qualifiedInterval.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ObservationDefinition.qualifiedInterval.extension", + "path" : "ObservationDefinition.qualifiedInterval.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "ObservationDefinition.qualifiedInterval.modifierExtension", + "path" : "ObservationDefinition.qualifiedInterval.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "ObservationDefinition.qualifiedInterval.category", + "path" : "ObservationDefinition.qualifiedInterval.category", + "short" : "reference | critical | absolute", + "definition" : "The category of interval of values for continuous or ordinal observations conforming to this ObservationDefinition.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.qualifiedInterval.category", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "example" : [{ + "label" : "General", + "valueCode" : "critical" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationRangeCategory" + }], + "strength" : "required", + "description" : "Codes identifying the category of observation range.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-range-category|4.0.1" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "OM-2" + }] + }, + { + "id" : "ObservationDefinition.qualifiedInterval.range", + "path" : "ObservationDefinition.qualifiedInterval.range", + "short" : "The interval itself, for continuous or ordinal observations", + "definition" : "The low and high values determining the interval. There may be only one of the two.", + "requirements" : "The unit may be not relevant for ordinal values. In case it is there, it is the same as quantitativeDetails.unit.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.qualifiedInterval.range", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Range" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OM-2" + }] + }, + { + "id" : "ObservationDefinition.qualifiedInterval.context", + "path" : "ObservationDefinition.qualifiedInterval.context", + "short" : "Range context qualifier", + "definition" : "Codes to indicate the health context the range applies to. For example, the normal or therapeutic range.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.qualifiedInterval.context", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationRangeMeaning" + }], + "strength" : "extensible", + "description" : "Code identifying the health context of a range.", + "valueSet" : "http://hl7.org/fhir/ValueSet/referencerange-meaning" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "n.a." + }] + }, + { + "id" : "ObservationDefinition.qualifiedInterval.appliesTo", + "path" : "ObservationDefinition.qualifiedInterval.appliesTo", + "short" : "Targetted population of the range", + "definition" : "Codes to indicate the target population this reference range applies to.", + "comment" : "If this element is not present then the global population is assumed.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "ObservationDefinition.qualifiedInterval.appliesTo", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationRangeAppliesTo" + }], + "strength" : "example", + "description" : "Codes identifying the population the reference range applies to.", + "valueSet" : "http://hl7.org/fhir/ValueSet/referencerange-appliesto" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "RFR.6" + }] + }, + { + "id" : "ObservationDefinition.qualifiedInterval.gender", + "path" : "ObservationDefinition.qualifiedInterval.gender", + "short" : "male | female | other | unknown", + "definition" : "Sex of the population the range applies to.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.qualifiedInterval.gender", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "example" : [{ + "label" : "General", + "valueCode" : "female" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "AdministrativeGender" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "required", + "description" : "The gender of a person used for administrative purposes.", + "valueSet" : "http://hl7.org/fhir/ValueSet/administrative-gender|4.0.1" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "RFR.2" + }] + }, + { + "id" : "ObservationDefinition.qualifiedInterval.age", + "path" : "ObservationDefinition.qualifiedInterval.age", + "short" : "Applicable age range, if relevant", + "definition" : "The age at which this reference range is applicable. This is a neonatal age (e.g. number of weeks at term) if the meaning says so.", + "comment" : "Some analytes vary greatly over age.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.qualifiedInterval.age", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Range" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "RFR.3" + }] + }, + { + "id" : "ObservationDefinition.qualifiedInterval.gestationalAge", + "path" : "ObservationDefinition.qualifiedInterval.gestationalAge", + "short" : "Applicable gestational age range, if relevant", + "definition" : "The gestational age to which this reference range is applicable, in the context of pregnancy.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.qualifiedInterval.gestationalAge", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Range" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "RFR.4" + }] + }, + { + "id" : "ObservationDefinition.qualifiedInterval.condition", + "path" : "ObservationDefinition.qualifiedInterval.condition", + "short" : "Condition associated with the reference range", + "definition" : "Text based condition for which the reference range is valid.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.qualifiedInterval.condition", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "RFR.7" + }] + }, + { + "id" : "ObservationDefinition.validCodedValueSet", + "path" : "ObservationDefinition.validCodedValueSet", + "short" : "Value set of valid coded values for the observations conforming to this ObservationDefinition", + "definition" : "The set of valid coded results for the observations conforming to this ObservationDefinition.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.validCodedValueSet", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/ValueSet"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OM3-3" + }] + }, + { + "id" : "ObservationDefinition.normalCodedValueSet", + "path" : "ObservationDefinition.normalCodedValueSet", + "short" : "Value set of normal coded values for the observations conforming to this ObservationDefinition", + "definition" : "The set of normal coded results for the observations conforming to this ObservationDefinition.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.normalCodedValueSet", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/ValueSet"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OM3-4" + }] + }, + { + "id" : "ObservationDefinition.abnormalCodedValueSet", + "path" : "ObservationDefinition.abnormalCodedValueSet", + "short" : "Value set of abnormal coded values for the observations conforming to this ObservationDefinition", + "definition" : "The set of abnormal coded results for the observation conforming to this ObservationDefinition.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.abnormalCodedValueSet", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/ValueSet"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OM3-5" + }] + }, + { + "id" : "ObservationDefinition.criticalCodedValueSet", + "path" : "ObservationDefinition.criticalCodedValueSet", + "short" : "Value set of critical coded values for the observations conforming to this ObservationDefinition", + "definition" : "The set of critical coded results for the observation conforming to this ObservationDefinition.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "ObservationDefinition.criticalCodedValueSet", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/ValueSet"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OM3-6" + }] + }] + }, + "differential" : { + "element" : [{ + "id" : "ObservationDefinition", + "path" : "ObservationDefinition" + }] + } } \ No newline at end of file diff --git a/StructureDefinition-study-data-dictionary-variable.profile.history.html b/StructureDefinition-study-data-dictionary-variable.profile.history.html index 8f3f7a0a..a5178a68 100644 --- a/StructureDefinition-study-data-dictionary-variable.profile.history.html +++ b/StructureDefinition-study-data-dictionary-variable.profile.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -298,7 +298,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Change History</h2 Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -356,7 +356,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - Change History</h2 <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-variable.profile.json.html b/StructureDefinition-study-data-dictionary-variable.profile.json.html index 063a9404..dfb3a03c 100644 --- a/StructureDefinition-study-data-dictionary-variable.profile.json.html +++ b/StructureDefinition-study-data-dictionary-variable.profile.json.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - JSON Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -342,7 +342,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - JSON Profile</h2> "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a>" : "StudyDataDictionaryVariable", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a>" : "NCPI Study Data Dictionary Data Variable", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a>" : "draft", - "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>" : [ { @@ -2192,7 +2192,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - JSON Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-variable.profile.ttl.html b/StructureDefinition-study-data-dictionary-variable.profile.ttl.html index c87fc8f2..0a12b0c3 100644 --- a/StructureDefinition-study-data-dictionary-variable.profile.ttl.html +++ b/StructureDefinition-study-data-dictionary-variable.profile.ttl.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - TTL Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -329,11 +329,11 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - TTL Profile</h2> a fhir:StructureDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "study-data-dictionary-variable"]; + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "study-data-dictionary-variable"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description &amp; Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck0.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-data-dictionary-variable-definitions.html#ObservationDefinition\">ObservationDefinition</a><a name=\"ObservationDefinition\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observationdefinition.html\">ObservationDefinition</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Definition of an observation</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -342,14 +342,14 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "business" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "StudyDataDictionaryVariable"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI Study Data Dictionary Data Variable"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "StudyDataDictionaryVariable"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI Study Data Dictionary Data Variable"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">fhir:StructureDefinition.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -365,9 +365,9 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "FHIR profile used to describe single variable from the dataset. This resource should be as complete as possible including details such as *description*, *data-type*, *permitted enumerations*, *quantity units*, etc."]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "FHIR profile used to describe single variable from the dataset. This resource should be as complete as possible including details such as *description*, *data-type*, *permitted enumerations*, *quantity units*, etc."]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping">fhir:StructureDefinition.mapping</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "v2" ]; @@ -383,15 +383,15 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "w5" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.uri">fhir:StructureDefinition.mapping.uri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/fivews" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.name">fhir:StructureDefinition.mapping.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "FiveWs Pattern Mapping" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "ObservationDefinition"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "ObservationDefinition"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.baseDefinition">fhir:StructureDefinition.baseDefinition</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/ObservationDefinition"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/ObservationDefinition> - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot">fhir:StructureDefinition.snapshot</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot.element">fhir:StructureDefinition.snapshot.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -1897,13 +1897,13 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.identity">fhir:ElementDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "v2" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.map">fhir:ElementDefinition.mapping.map</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "OM3-6" ] ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential">fhir:StructureDefinition.differential</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential.element">fhir:StructureDefinition.differential.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.id">fhir:Element.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ObservationDefinition" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.path">fhir:ElementDefinition.path</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ObservationDefinition" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -1965,7 +1965,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - TTL Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-variable.profile.xml.html b/StructureDefinition-study-data-dictionary-variable.profile.xml.html index f1078105..8db0694f 100644 --- a/StructureDefinition-study-data-dictionary-variable.profile.xml.html +++ b/StructureDefinition-study-data-dictionary-variable.profile.xml.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - XML Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -342,7 +342,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - XML Profile</h2> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="StudyDataDictionaryVariable"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI Study Data Dictionary Data Variable"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> - <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -2011,7 +2011,7 @@ <h2 id="root">Resource Profile: StudyDataDictionaryVariable - XML Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-data-dictionary-variable.ttl b/StructureDefinition-study-data-dictionary-variable.ttl index 9f12151b..f16f44f3 100644 --- a/StructureDefinition-study-data-dictionary-variable.ttl +++ b/StructureDefinition-study-data-dictionary-variable.ttl @@ -7,11 +7,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable> a fhir:StructureDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "study-data-dictionary-variable"]; + fhir:Resource.id [ fhir:value "study-data-dictionary-variable"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck0.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-data-dictionary-variable-definitions.html#ObservationDefinition\">ObservationDefinition</a><a name=\"ObservationDefinition\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observationdefinition.html\">ObservationDefinition</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Definition of an observation</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -20,14 +20,14 @@ fhir:index 1; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; fhir:Extension.valueCode [ fhir:value "business" ] - ]; - fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"]; - fhir:StructureDefinition.version [ fhir:value "0.2.0"]; - fhir:StructureDefinition.name [ fhir:value "StudyDataDictionaryVariable"]; - fhir:StructureDefinition.title [ fhir:value "NCPI Study Data Dictionary Data Variable"]; - fhir:StructureDefinition.status [ fhir:value "draft"]; - fhir:StructureDefinition.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable"]; # + fhir:StructureDefinition.version [ fhir:value "0.2.0"]; # + fhir:StructureDefinition.name [ fhir:value "StudyDataDictionaryVariable"]; # + fhir:StructureDefinition.title [ fhir:value "NCPI Study Data Dictionary Data Variable"]; # + fhir:StructureDefinition.status [ fhir:value "draft"]; # + fhir:StructureDefinition.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:StructureDefinition.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -45,9 +45,9 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:StructureDefinition.description [ fhir:value "FHIR profile used to describe single variable from the dataset. This resource should be as complete as possible including details such as *description*, *data-type*, *permitted enumerations*, *quantity units*, etc."]; - fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; + ]; # + fhir:StructureDefinition.description [ fhir:value "FHIR profile used to describe single variable from the dataset. This resource should be as complete as possible including details such as *description*, *data-type*, *permitted enumerations*, *quantity units*, etc."]; # + fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; # fhir:StructureDefinition.mapping [ fhir:index 0; fhir:StructureDefinition.mapping.identity [ fhir:value "v2" ]; @@ -63,15 +63,15 @@ fhir:StructureDefinition.mapping.identity [ fhir:value "w5" ]; fhir:StructureDefinition.mapping.uri [ fhir:value "http://hl7.org/fhir/fivews" ]; fhir:StructureDefinition.mapping.name [ fhir:value "FiveWs Pattern Mapping" ] - ]; - fhir:StructureDefinition.kind [ fhir:value "resource"]; - fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; - fhir:StructureDefinition.type [ fhir:value "ObservationDefinition"]; + ]; # + fhir:StructureDefinition.kind [ fhir:value "resource"]; # + fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; # + fhir:StructureDefinition.type [ fhir:value "ObservationDefinition"]; # fhir:StructureDefinition.baseDefinition [ fhir:value "http://hl7.org/fhir/StructureDefinition/ObservationDefinition"; fhir:link <http://hl7.org/fhir/StructureDefinition/ObservationDefinition> - ]; - fhir:StructureDefinition.derivation [ fhir:value "constraint"]; + ]; # + fhir:StructureDefinition.derivation [ fhir:value "constraint"]; # fhir:StructureDefinition.snapshot [ fhir:StructureDefinition.snapshot.element [ fhir:index 0; @@ -1903,14 +1903,14 @@ fhir:ElementDefinition.mapping.map [ fhir:value "OM3-6" ] ] ] - ]; + ]; # fhir:StructureDefinition.differential [ fhir:StructureDefinition.differential.element [ fhir:index 0; fhir:Element.id [ fhir:value "ObservationDefinition" ]; fhir:ElementDefinition.path [ fhir:value "ObservationDefinition" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/StructureDefinition-study-data-dictionary-variable.xlsx b/StructureDefinition-study-data-dictionary-variable.xlsx index 6b7ff181..1c43ec74 100644 Binary files a/StructureDefinition-study-data-dictionary-variable.xlsx and b/StructureDefinition-study-data-dictionary-variable.xlsx differ diff --git a/StructureDefinition-study-data-dictionary-variable.xml b/StructureDefinition-study-data-dictionary-variable.xml index ef4dea1f..f7bd7de2 100644 --- a/StructureDefinition-study-data-dictionary-variable.xml +++ b/StructureDefinition-study-data-dictionary-variable.xml @@ -17,7 +17,7 @@ <name value="StudyDataDictionaryVariable"/> <title value="NCPI Study Data Dictionary Data Variable"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/StructureDefinition-study-group-definitions.html b/StructureDefinition-study-group-definitions.html index 562bf689..7a3a5453 100644 --- a/StructureDefinition-study-group-definitions.html +++ b/StructureDefinition-study-group-definitions.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyGroup - Detailed Descriptions</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -327,7 +327,8 @@ <h2 id="root">Resource Profile: StudyGroup - Detailed Descriptions</h2> </ul> <a name="tabs-diff"> </a> <div id="tabs-diff"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Group"> </a><span style="color: grey">1.</span> <b>Group</b><a href="#diff_Group" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Group.type"> </a><span style="color: grey">2.</span> <b>Group.type</b><a href="#diff_Group.type" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Pattern Value</td><td>person</td></tr> @@ -340,13 +341,14 @@ <h2 id="root">Resource Profile: StudyGroup - Detailed Descriptions</h2> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Group.member"> </a><span style="color: grey">6.</span> <b>Group.member</b><a href="#diff_Group.member" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..?</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Group.member.entity"> </a><span style="color: grey">7.</span> <b>Group.member.entity</b><a href="#diff_Group.member.entity" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/medication.html" title="http://hl7.org/fhir/StructureDefinition/Medication">Medication</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/substance.html" title="http://hl7.org/fhir/StructureDefinition/Substance">Substance</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/medication.html" title="http://hl7.org/fhir/StructureDefinition/Medication">Medication</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/substance.html" title="http://hl7.org/fhir/StructureDefinition/Substance">Substance</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>)</td></tr> </table> </div> <a name="tabs-key"> </a> <div id="tabs-key"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="key_Group"> </a><span style="color: grey">1.</span> <b>Group</b><a href="#key_Group" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><span style='color:DarkGray'><p>Represents a defined collection of entities that may be discussed or acted upon collectively but which are not expected to act collectively, and are not formally or legally recognized; i.e. a collection of entities that isn't an Organization.</p> </span></td></tr> @@ -431,7 +433,8 @@ <h2 id="root">Resource Profile: StudyGroup - Detailed Descriptions</h2> </div> <a name="tabs-snap"> </a> <div id="tabs-snap"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Group"> </a><span style="color: grey">1.</span> <b>Group</b><a href="#Group" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>Represents a defined collection of entities that may be discussed or acted upon collectively but which are not expected to act collectively, and are not formally or legally recognized; i.e. a collection of entities that isn't an Organization.</p> </td></tr> @@ -479,7 +482,7 @@ <h2 id="root">Resource Profile: StudyGroup - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#Narrative">Narrative</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrativehtmlxhtmldisplay</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrative, html, xhtml, display</td></tr> <tr><td>Comments</td><td><p>Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a "text blob" or where text is additionally entered raw or narrated and encoded information is added later.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -489,7 +492,7 @@ <h2 id="root">Resource Profile: StudyGroup - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/resource.html">Resource</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resourcesanonymous resourcescontained resources</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resources, anonymous resources, contained resources</td></tr> <tr><td>Comments</td><td><p>This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Group.extension"> </a><span style="color: grey">8.</span> <b>Group.extension</b><a href="#Group.extension" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -497,7 +500,7 @@ <h2 id="root">Resource Profile: StudyGroup - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -511,7 +514,7 @@ <h2 id="root">Resource Profile: StudyGroup - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -597,7 +600,7 @@ <h2 id="root">Resource Profile: StudyGroup - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Entity responsible for defining and maintaining Group characteristics and/or registered members.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a><a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a><a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>|<a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>|<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a>|<a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a>)</td></tr> <tr><td>Comments</td><td><p>This does not strictly align with ownership of a herd or flock, but may suffice to represent that relationship in simple cases. More complex cases will require an extension.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -624,7 +627,7 @@ <h2 id="root">Resource Profile: StudyGroup - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -638,7 +641,7 @@ <h2 id="root">Resource Profile: StudyGroup - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -706,7 +709,7 @@ <h2 id="root">Resource Profile: StudyGroup - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -720,7 +723,7 @@ <h2 id="root">Resource Profile: StudyGroup - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -729,7 +732,7 @@ <h2 id="root">Resource Profile: StudyGroup - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>A reference to the entity that is a member of the group. Must be consistent with Group.type. If the entity is another group, then the type must be the same.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>)</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Group.member.period"> </a><span style="color: grey">31.</span> <b>Group.member.period</b><a href="#Group.member.period" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -808,7 +811,7 @@ <h2 id="root">Resource Profile: StudyGroup - Detailed Descriptions</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-group-examples.html b/StructureDefinition-study-group-examples.html index 298bc38f..adc2145d 100644 --- a/StructureDefinition-study-group-examples.html +++ b/StructureDefinition-study-group-examples.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyGroup - Examples</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -384,7 +384,7 @@ <h2 id="root">Resource Profile: StudyGroup - Examples</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-group-mappings.html b/StructureDefinition-study-group-mappings.html index 4547f1d9..a22afd9a 100644 --- a/StructureDefinition-study-group-mappings.html +++ b/StructureDefinition-study-group-mappings.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyGroup - Mappings</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -401,7 +401,7 @@ <h2 id="root">Resource Profile: StudyGroup - Mappings</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-group-testing.html b/StructureDefinition-study-group-testing.html index 98dc62e9..214c0321 100644 --- a/StructureDefinition-study-group-testing.html +++ b/StructureDefinition-study-group-testing.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyGroup - Testing</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -362,7 +362,7 @@ <h2 id="root">Resource Profile: StudyGroup - Testing</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-group.html b/StructureDefinition-study-group.html index 8a62cc80..b1ffd9d8 100644 --- a/StructureDefinition-study-group.html +++ b/StructureDefinition-study-group.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -321,7 +321,7 @@ <h2 id="root">Resource Profile: Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -1019,7 +1019,7 @@ <h3>Notes:</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-group.json b/StructureDefinition-study-group.json index 64883a6c..05bbcac5 100644 --- a/StructureDefinition-study-group.json +++ b/StructureDefinition-study-group.json @@ -1,1493 +1,1261 @@ -{ - "resourceType": "StructureDefinition", - "id": "study-group", - "text": { - "status": "extensions", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group\">Group</a><a name=\"Group\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/group.html\">Group</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Group of multiple entities</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.type\">type</a><a name=\"Group.type\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">person | animal | practitioner | device | medication | substance</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">person</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.actual\">actual</a><a name=\"Group.actual\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#boolean\">boolean</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Descriptive or actual</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">true</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.code\">code</a><a name=\"Group.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Kind of Group members</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck101.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#CodeableConcept.coding\">coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..*</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Code defined by a terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">(complex)</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">http://snomed.info/sct</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">44807982</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">Participant in research study</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.quantity\">quantity</a><a name=\"Group.quantity\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#unsignedInt\">unsignedInt</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Number of members</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck01.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.member\">member</a><a name=\"Group.member\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.member.entity\">entity</a><a name=\"Group.member.entity\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/patient.html\">Patient</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Reference to the group member</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - }, - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", - "valueString": "Base.Individuals" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", - "valueCode": "business" - } - ], - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group", - "version": "0.2.0", - "name": "StudyGroup", - "title": "NCPI Study Group", - "status": "draft", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "Grouping subject participation within a research study is helpful to provide definitive lists of participants that fit a specific criteria such as *All Participants* or *Participants From a Particular Consent Group*, etc. ", - "fhirVersion": "4.0.1", - "mapping": [ - { - "identity": "rim", - "uri": "http://hl7.org/v3", - "name": "RIM Mapping" - }, - { - "identity": "w5", - "uri": "http://hl7.org/fhir/fivews", - "name": "FiveWs Pattern Mapping" - } - ], - "kind": "resource", - "abstract": false, - "type": "Group", - "baseDefinition": "http://hl7.org/fhir/StructureDefinition/Group", - "derivation": "constraint", - "snapshot": { - "element": [ - { - "id": "Group", - "path": "Group", - "short": "Group of multiple entities", - "definition": "Represents a defined collection of entities that may be discussed or acted upon collectively but which are not expected to act collectively, and are not formally or legally recognized; i.e. a collection of entities that isn't an Organization.", - "comment": "If both Group.characteristic and Group.member are present, then the members are the individuals who were found who met the characteristic. It's possible that there might be other candidate members who meet the characteristic and aren't (yet) in the list. All members SHALL have the listed characteristics.", - "min": 0, - "max": "*", - "base": { - "path": "Group", - "min": 0, - "max": "*" - }, - "constraint": [ - { - "key": "dom-2", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL NOT contain nested Resources", - "expression": "contained.contained.empty()", - "xpath": "not(parent::f:contained and f:contained)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-3", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", - "expression": "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", - "xpath": "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-4", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", - "expression": "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-5", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a security label", - "expression": "contained.meta.security.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:security))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", - "valueBoolean": true - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", - "valueMarkdown": "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." - } - ], - "key": "dom-6", - "severity": "warning", - "human": "A resource should have narrative for robust management", - "expression": "text.`div`.exists()", - "xpath": "exists(f:text/h:div)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "grp-1", - "severity": "error", - "human": "Can only have members if group is \"actual\"", - "expression": "member.empty() or (actual = true)", - "xpath": "f:actual/@value=true() or not(exists(f:member))", - "source": "http://hl7.org/fhir/StructureDefinition/Group" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Entity. Role, or Act" - }, - { - "identity": "rim", - "map": "Entity[determinerCode=\"GRP\" or determinerCode=\"GRP_KIND\"]" - } - ] - }, - { - "id": "Group.id", - "path": "Group.id", - "short": "Logical id of this artifact", - "definition": "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", - "comment": "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "id" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "Group.meta", - "path": "Group.meta", - "short": "Metadata about the resource", - "definition": "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.meta", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Meta" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "Group.implicitRules", - "path": "Group.implicitRules", - "short": "A set of rules under which this content was created", - "definition": "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", - "comment": "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.implicitRules", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", - "isSummary": true - }, - { - "id": "Group.language", - "path": "Group.language", - "short": "Language of the resource content", - "definition": "The base language in which the resource is written.", - "comment": "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", - "min": 0, - "max": "1", - "base": { - "path": "Resource.language", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", - "valueCanonical": "http://hl7.org/fhir/ValueSet/all-languages" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "Language" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "preferred", - "description": "A human language.", - "valueSet": "http://hl7.org/fhir/ValueSet/languages" - } - }, - { - "id": "Group.text", - "path": "Group.text", - "short": "Text summary of the resource, for human interpretation", - "definition": "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", - "comment": "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", - "alias": [ - "narrative", - "html", - "xhtml", - "display" - ], - "min": 0, - "max": "1", - "base": { - "path": "DomainResource.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Narrative" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Act.text?" - } - ] - }, - { - "id": "Group.contained", - "path": "Group.contained", - "short": "Contained, inline Resources", - "definition": "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", - "comment": "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", - "alias": [ - "inline resources", - "anonymous resources", - "contained resources" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.contained", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Resource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Group.extension", - "path": "Group.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Group.modifierExtension", - "path": "Group.modifierExtension", - "short": "Extensions that cannot be ignored", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Group.identifier", - "path": "Group.identifier", - "short": "Unique id", - "definition": "A unique business identifier for this group.", - "requirements": "Allows the group to be referenced from external specifications.", - "min": 0, - "max": "*", - "base": { - "path": "Group.identifier", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Identifier" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.identifier" - }, - { - "identity": "rim", - "map": "unique(./id[displayable=\"true\" and scope=\"OBJ\"])" - } - ] - }, - { - "id": "Group.active", - "path": "Group.active", - "short": "Whether this group's record is in active use", - "definition": "Indicates whether the record for the group is available for use or is merely being retained for historical purposes.", - "requirements": "Need to be able to mark a group record as not to be used because it was created in error or is otherwise no longer available (e.g. a herd that no longer exists).", - "min": 0, - "max": "1", - "base": { - "path": "Group.active", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "boolean" - } - ], - "meaningWhenMissing": "This resource is generally assumed to be active if no value is provided for the active element", - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.status" - }, - { - "identity": "rim", - "map": "./statusCode" - } - ] - }, - { - "id": "Group.type", - "path": "Group.type", - "short": "person | animal | practitioner | device | medication | substance", - "definition": "Identifies the broad classification of the kind of resources the group includes.", - "comment": "Group members SHALL be of the appropriate resource type (Patient for person or animal; or Practitioner, Device, Medication or Substance for the other types.).", - "requirements": "Identifies what type of resources the group is made up of.", - "min": 1, - "max": "1", - "base": { - "path": "Group.type", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "patternCode": "person", - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "GroupType" - } - ], - "strength": "required", - "description": "Types of resources that are part of group.", - "valueSet": "http://hl7.org/fhir/ValueSet/group-type|4.0.1" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.class" - }, - { - "identity": "rim", - "map": "person: ./classCode=\"PSN\" animal: ./classCode=\"ANM\" device: ./classCode=\"DEV\" medication: ./classCode=\"MMAT\" and ./playedRole[isNormalRole() and classCode=\"THER\"] food: ./classCode=\"FOOD\"" - } - ] - }, - { - "id": "Group.actual", - "path": "Group.actual", - "short": "Descriptive or actual", - "definition": "If true, indicates that the resource refers to a specific group of real individuals. If false, the group defines a set of intended individuals.", - "requirements": "There are use-cases for groups that define specific collections of individuals, and other groups that define \"types\" of intended individuals. The requirements for both kinds of groups are similar, so we use a single resource, distinguished by this flag.", - "min": 1, - "max": "1", - "base": { - "path": "Group.actual", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "boolean" - } - ], - "patternBoolean": true, - "condition": [ - "grp-1" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.class" - }, - { - "identity": "rim", - "map": "true: ./determinerCode=\"GRP\" false: ./determinerCode=\"GRP_KIND\"" - } - ] - }, - { - "id": "Group.code", - "path": "Group.code", - "short": "Kind of Group members", - "definition": "Provides a specific type of resource the group includes; e.g. \"cow\", \"syringe\", etc.", - "comment": "This would generally be omitted for Person resources.", - "min": 0, - "max": "1", - "base": { - "path": "Group.code", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "patternCodeableConcept": { - "coding": [ - { - "system": "http://snomed.info/sct", - "code": "44807982", - "display": "Participant in research study" - } - ] - }, - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "GroupKind" - } - ], - "strength": "example", - "description": "Kind of particular resource; e.g. cow, syringe, lake, etc." - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.what[x]" - }, - { - "identity": "rim", - "map": "./code" - } - ] - }, - { - "id": "Group.name", - "path": "Group.name", - "short": "Label for Group", - "definition": "A label assigned to the group for human identification and communication.", - "requirements": "Used to identify the group in human communication.", - "min": 0, - "max": "1", - "base": { - "path": "Group.name", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "./name[type=\"ST\"]" - } - ] - }, - { - "id": "Group.quantity", - "path": "Group.quantity", - "short": "Number of members", - "definition": "A count of the number of resource instances that are part of the group.", - "comment": "Note that the quantity may be less than the number of members if some of the members are not active.", - "requirements": "Group size is a common defining characteristic.", - "min": 1, - "max": "1", - "base": { - "path": "Group.quantity", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "unsignedInt" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "./quantity" - } - ] - }, - { - "id": "Group.managingEntity", - "path": "Group.managingEntity", - "short": "Entity that is the custodian of the Group's definition", - "definition": "Entity responsible for defining and maintaining Group characteristics and/or registered members.", - "comment": "This does not strictly align with ownership of a herd or flock, but may suffice to represent that relationship in simple cases. More complex cases will require an extension.", - "min": 0, - "max": "1", - "base": { - "path": "Group.managingEntity", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Organization", - "http://hl7.org/fhir/StructureDefinition/RelatedPerson", - "http://hl7.org/fhir/StructureDefinition/Practitioner", - "http://hl7.org/fhir/StructureDefinition/PractitionerRole" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "Group.characteristic", - "path": "Group.characteristic", - "short": "Include / Exclude group members by Trait", - "definition": "Identifies traits whose presence r absence is shared by members of the group.", - "comment": "All the identified characteristics must be true for an entity to a member of the group.", - "requirements": "Needs to be a generic mechanism for identifying what individuals can be part of a group.", - "min": 0, - "max": "*", - "base": { - "path": "Group.characteristic", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "./playedRole[isNormalRole()]/participation[isNormalParticipation() and typeCode=\"SBJ\"]/act[isNormalAct and classCode=\"OBS\" and moodCode=\"EVN\"]" - } - ] - }, - { - "id": "Group.characteristic.id", - "path": "Group.characteristic.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Group.characteristic.extension", - "path": "Group.characteristic.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Group.characteristic.modifierExtension", - "path": "Group.characteristic.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Group.characteristic.code", - "path": "Group.characteristic.code", - "short": "Kind of characteristic", - "definition": "A code that identifies the kind of trait being asserted.", - "requirements": "Need a formal way of identifying the characteristic being described.", - "min": 1, - "max": "1", - "base": { - "path": "Group.characteristic.code", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "GroupCharacteristicKind" - } - ], - "strength": "example", - "description": "List of characteristics used to describe group members; e.g. gender, age, owner, location, etc." - }, - "mapping": [ - { - "identity": "rim", - "map": "./code" - } - ] - }, - { - "id": "Group.characteristic.value[x]", - "path": "Group.characteristic.value[x]", - "short": "Value held by characteristic", - "definition": "The value of the trait that holds (or does not hold - see 'exclude') for members of the group.", - "comment": "For Range, it means members of the group have a value that falls somewhere within the specified range.", - "requirements": "The value of the characteristic is what determines group membership.", - "min": 1, - "max": "1", - "base": { - "path": "Group.characteristic.value[x]", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - }, - { - "code": "boolean" - }, - { - "code": "Quantity" - }, - { - "code": "Range" - }, - { - "code": "Reference" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "GroupCharacteristicValue" - } - ], - "strength": "example", - "description": "Value of descriptive member characteristic; e.g. red, male, pneumonia, Caucasian, etc." - }, - "mapping": [ - { - "identity": "rim", - "map": "./value" - } - ] - }, - { - "id": "Group.characteristic.exclude", - "path": "Group.characteristic.exclude", - "short": "Group includes or excludes", - "definition": "If true, indicates the characteristic is one that is NOT held by members of the group.", - "comment": "This is labeled as \"Is Modifier\" because applications cannot wrongly include excluded members as included or vice versa.", - "requirements": "Sometimes group membership is determined by characteristics not possessed.", - "min": 1, - "max": "1", - "base": { - "path": "Group.characteristic.exclude", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "boolean" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "./valueNegationInd" - } - ] - }, - { - "id": "Group.characteristic.period", - "path": "Group.characteristic.period", - "short": "Period over which characteristic is tested", - "definition": "The period over which the characteristic is tested; e.g. the patient had an operation during the month of June.", - "min": 0, - "max": "1", - "base": { - "path": "Group.characteristic.period", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Period" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "Group.member", - "path": "Group.member", - "short": "Who or what is in group", - "definition": "Identifies the resource instances that are members of the group.", - "requirements": "Often the only thing of interest about a group is \"who's in it\".", - "min": 0, - "max": "*", - "base": { - "path": "Group.member", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "condition": [ - "grp-1" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "./scopedRole[isNormalRole() and classCode=\"MBR\"]/player" - } - ] - }, - { - "id": "Group.member.id", - "path": "Group.member.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Group.member.extension", - "path": "Group.member.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Group.member.modifierExtension", - "path": "Group.member.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Group.member.entity", - "path": "Group.member.entity", - "short": "Reference to the group member", - "definition": "A reference to the entity that is a member of the group. Must be consistent with Group.type. If the entity is another group, then the type must be the same.", - "min": 1, - "max": "1", - "base": { - "path": "Group.member.entity", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Patient" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "Group.member.period", - "path": "Group.member.period", - "short": "Period member belonged to the group", - "definition": "The period that the member was in the group, if known.", - "requirements": "Need to track who was in a group at a particular time.", - "min": 0, - "max": "1", - "base": { - "path": "Group.member.period", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Period" - } - ], - "meaningWhenMissing": "The member is in the group at this time", - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "Group.member.inactive", - "path": "Group.member.inactive", - "short": "If member is no longer in group", - "definition": "A flag to indicate that the member is no longer in the group, but previously may have been a member.", - "requirements": "Sometimes you don't know when someone stopped being in a group, but not when.", - "min": 0, - "max": "1", - "base": { - "path": "Group.member.inactive", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "boolean" - } - ], - "meaningWhenMissing": "Members are considered active unless explicitly specified otherwise", - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false - } - ] - }, - "differential": { - "element": [ - { - "id": "Group", - "path": "Group" - }, - { - "id": "Group.type", - "path": "Group.type", - "patternCode": "person" - }, - { - "id": "Group.actual", - "path": "Group.actual", - "patternBoolean": true - }, - { - "id": "Group.code", - "path": "Group.code", - "patternCodeableConcept": { - "coding": [ - { - "system": "http://snomed.info/sct", - "code": "44807982", - "display": "Participant in research study" - } - ] - } - }, - { - "id": "Group.quantity", - "path": "Group.quantity", - "min": 1 - }, - { - "id": "Group.member.entity", - "path": "Group.member.entity", - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Patient" - ] - } - ] - } - ] - } +{ + "resourceType" : "StructureDefinition", + "id" : "study-group", + "text" : { + "status" : "extensions", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group\">Group</a><a name=\"Group\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/group.html\">Group</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Group of multiple entities</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.type\">type</a><a name=\"Group.type\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">person | animal | practitioner | device | medication | substance</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">person</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.actual\">actual</a><a name=\"Group.actual\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#boolean\">boolean</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Descriptive or actual</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">true</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.code\">code</a><a name=\"Group.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Kind of Group members</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck101.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#CodeableConcept.coding\">coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..*</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Code defined by a terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">(complex)</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">http://snomed.info/sct</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">44807982</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">Participant in research study</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.quantity\">quantity</a><a name=\"Group.quantity\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#unsignedInt\">unsignedInt</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Number of members</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck01.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.member\">member</a><a name=\"Group.member\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.member.entity\">entity</a><a name=\"Group.member.entity\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/patient.html\">Patient</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Reference to the group member</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" + }, + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", + "valueString" : "Base.Individuals" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", + "valueCode" : "business" + }], + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group", + "version" : "0.2.0", + "name" : "StudyGroup", + "title" : "NCPI Study Group", + "status" : "draft", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "Grouping subject participation within a research study is helpful to provide definitive lists of participants that fit a specific criteria such as *All Participants* or *Participants From a Particular Consent Group*, etc. ", + "fhirVersion" : "4.0.1", + "mapping" : [{ + "identity" : "rim", + "uri" : "http://hl7.org/v3", + "name" : "RIM Mapping" + }, + { + "identity" : "w5", + "uri" : "http://hl7.org/fhir/fivews", + "name" : "FiveWs Pattern Mapping" + }], + "kind" : "resource", + "abstract" : false, + "type" : "Group", + "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/Group", + "derivation" : "constraint", + "snapshot" : { + "element" : [{ + "id" : "Group", + "path" : "Group", + "short" : "Group of multiple entities", + "definition" : "Represents a defined collection of entities that may be discussed or acted upon collectively but which are not expected to act collectively, and are not formally or legally recognized; i.e. a collection of entities that isn't an Organization.", + "comment" : "If both Group.characteristic and Group.member are present, then the members are the individuals who were found who met the characteristic. It's possible that there might be other candidate members who meet the characteristic and aren't (yet) in the list. All members SHALL have the listed characteristics.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Group", + "min" : 0, + "max" : "*" + }, + "constraint" : [{ + "key" : "dom-2", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL NOT contain nested Resources", + "expression" : "contained.contained.empty()", + "xpath" : "not(parent::f:contained and f:contained)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-3", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", + "expression" : "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", + "xpath" : "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-4", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", + "expression" : "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-5", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a security label", + "expression" : "contained.meta.security.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:security))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", + "valueBoolean" : true + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", + "valueMarkdown" : "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." + }], + "key" : "dom-6", + "severity" : "warning", + "human" : "A resource should have narrative for robust management", + "expression" : "text.`div`.exists()", + "xpath" : "exists(f:text/h:div)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "grp-1", + "severity" : "error", + "human" : "Can only have members if group is \"actual\"", + "expression" : "member.empty() or (actual = true)", + "xpath" : "f:actual/@value=true() or not(exists(f:member))", + "source" : "http://hl7.org/fhir/StructureDefinition/Group" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Entity. Role, or Act" + }, + { + "identity" : "rim", + "map" : "Entity[determinerCode=\"GRP\" or determinerCode=\"GRP_KIND\"]" + }] + }, + { + "id" : "Group.id", + "path" : "Group.id", + "short" : "Logical id of this artifact", + "definition" : "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", + "comment" : "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "id" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "Group.meta", + "path" : "Group.meta", + "short" : "Metadata about the resource", + "definition" : "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.meta", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Meta" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "Group.implicitRules", + "path" : "Group.implicitRules", + "short" : "A set of rules under which this content was created", + "definition" : "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", + "comment" : "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.implicitRules", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", + "isSummary" : true + }, + { + "id" : "Group.language", + "path" : "Group.language", + "short" : "Language of the resource content", + "definition" : "The base language in which the resource is written.", + "comment" : "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.language", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", + "valueCanonical" : "http://hl7.org/fhir/ValueSet/all-languages" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "Language" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "preferred", + "description" : "A human language.", + "valueSet" : "http://hl7.org/fhir/ValueSet/languages" + } + }, + { + "id" : "Group.text", + "path" : "Group.text", + "short" : "Text summary of the resource, for human interpretation", + "definition" : "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", + "comment" : "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", + "alias" : ["narrative", + "html", + "xhtml", + "display"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "DomainResource.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Narrative" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Act.text?" + }] + }, + { + "id" : "Group.contained", + "path" : "Group.contained", + "short" : "Contained, inline Resources", + "definition" : "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", + "comment" : "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", + "alias" : ["inline resources", + "anonymous resources", + "contained resources"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.contained", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Resource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Group.extension", + "path" : "Group.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Group.modifierExtension", + "path" : "Group.modifierExtension", + "short" : "Extensions that cannot be ignored", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Group.identifier", + "path" : "Group.identifier", + "short" : "Unique id", + "definition" : "A unique business identifier for this group.", + "requirements" : "Allows the group to be referenced from external specifications.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Group.identifier", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Identifier" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.identifier" + }, + { + "identity" : "rim", + "map" : "unique(./id[displayable=\"true\" and scope=\"OBJ\"])" + }] + }, + { + "id" : "Group.active", + "path" : "Group.active", + "short" : "Whether this group's record is in active use", + "definition" : "Indicates whether the record for the group is available for use or is merely being retained for historical purposes.", + "requirements" : "Need to be able to mark a group record as not to be used because it was created in error or is otherwise no longer available (e.g. a herd that no longer exists).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Group.active", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "boolean" + }], + "meaningWhenMissing" : "This resource is generally assumed to be active if no value is provided for the active element", + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.status" + }, + { + "identity" : "rim", + "map" : "./statusCode" + }] + }, + { + "id" : "Group.type", + "path" : "Group.type", + "short" : "person | animal | practitioner | device | medication | substance", + "definition" : "Identifies the broad classification of the kind of resources the group includes.", + "comment" : "Group members SHALL be of the appropriate resource type (Patient for person or animal; or Practitioner, Device, Medication or Substance for the other types.).", + "requirements" : "Identifies what type of resources the group is made up of.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Group.type", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "patternCode" : "person", + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "GroupType" + }], + "strength" : "required", + "description" : "Types of resources that are part of group.", + "valueSet" : "http://hl7.org/fhir/ValueSet/group-type|4.0.1" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.class" + }, + { + "identity" : "rim", + "map" : "person: ./classCode=\"PSN\" animal: ./classCode=\"ANM\" device: ./classCode=\"DEV\" medication: ./classCode=\"MMAT\" and ./playedRole[isNormalRole() and classCode=\"THER\"] food: ./classCode=\"FOOD\"" + }] + }, + { + "id" : "Group.actual", + "path" : "Group.actual", + "short" : "Descriptive or actual", + "definition" : "If true, indicates that the resource refers to a specific group of real individuals. If false, the group defines a set of intended individuals.", + "requirements" : "There are use-cases for groups that define specific collections of individuals, and other groups that define \"types\" of intended individuals. The requirements for both kinds of groups are similar, so we use a single resource, distinguished by this flag.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Group.actual", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "boolean" + }], + "patternBoolean" : true, + "condition" : ["grp-1"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.class" + }, + { + "identity" : "rim", + "map" : "true: ./determinerCode=\"GRP\" false: ./determinerCode=\"GRP_KIND\"" + }] + }, + { + "id" : "Group.code", + "path" : "Group.code", + "short" : "Kind of Group members", + "definition" : "Provides a specific type of resource the group includes; e.g. \"cow\", \"syringe\", etc.", + "comment" : "This would generally be omitted for Person resources.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Group.code", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "patternCodeableConcept" : { + "coding" : [{ + "system" : "http://snomed.info/sct", + "code" : "44807982", + "display" : "Participant in research study" + }] + }, + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "GroupKind" + }], + "strength" : "example", + "description" : "Kind of particular resource; e.g. cow, syringe, lake, etc." + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.what[x]" + }, + { + "identity" : "rim", + "map" : "./code" + }] + }, + { + "id" : "Group.name", + "path" : "Group.name", + "short" : "Label for Group", + "definition" : "A label assigned to the group for human identification and communication.", + "requirements" : "Used to identify the group in human communication.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Group.name", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "./name[type=\"ST\"]" + }] + }, + { + "id" : "Group.quantity", + "path" : "Group.quantity", + "short" : "Number of members", + "definition" : "A count of the number of resource instances that are part of the group.", + "comment" : "Note that the quantity may be less than the number of members if some of the members are not active.", + "requirements" : "Group size is a common defining characteristic.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Group.quantity", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "unsignedInt" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "./quantity" + }] + }, + { + "id" : "Group.managingEntity", + "path" : "Group.managingEntity", + "short" : "Entity that is the custodian of the Group's definition", + "definition" : "Entity responsible for defining and maintaining Group characteristics and/or registered members.", + "comment" : "This does not strictly align with ownership of a herd or flock, but may suffice to represent that relationship in simple cases. More complex cases will require an extension.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Group.managingEntity", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Organization", + "http://hl7.org/fhir/StructureDefinition/RelatedPerson", + "http://hl7.org/fhir/StructureDefinition/Practitioner", + "http://hl7.org/fhir/StructureDefinition/PractitionerRole"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "Group.characteristic", + "path" : "Group.characteristic", + "short" : "Include / Exclude group members by Trait", + "definition" : "Identifies traits whose presence r absence is shared by members of the group.", + "comment" : "All the identified characteristics must be true for an entity to a member of the group.", + "requirements" : "Needs to be a generic mechanism for identifying what individuals can be part of a group.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Group.characteristic", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "./playedRole[isNormalRole()]/participation[isNormalParticipation() and typeCode=\"SBJ\"]/act[isNormalAct and classCode=\"OBS\" and moodCode=\"EVN\"]" + }] + }, + { + "id" : "Group.characteristic.id", + "path" : "Group.characteristic.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Group.characteristic.extension", + "path" : "Group.characteristic.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Group.characteristic.modifierExtension", + "path" : "Group.characteristic.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Group.characteristic.code", + "path" : "Group.characteristic.code", + "short" : "Kind of characteristic", + "definition" : "A code that identifies the kind of trait being asserted.", + "requirements" : "Need a formal way of identifying the characteristic being described.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Group.characteristic.code", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "GroupCharacteristicKind" + }], + "strength" : "example", + "description" : "List of characteristics used to describe group members; e.g. gender, age, owner, location, etc." + }, + "mapping" : [{ + "identity" : "rim", + "map" : "./code" + }] + }, + { + "id" : "Group.characteristic.value[x]", + "path" : "Group.characteristic.value[x]", + "short" : "Value held by characteristic", + "definition" : "The value of the trait that holds (or does not hold - see 'exclude') for members of the group.", + "comment" : "For Range, it means members of the group have a value that falls somewhere within the specified range.", + "requirements" : "The value of the characteristic is what determines group membership.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Group.characteristic.value[x]", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }, + { + "code" : "boolean" + }, + { + "code" : "Quantity" + }, + { + "code" : "Range" + }, + { + "code" : "Reference" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "GroupCharacteristicValue" + }], + "strength" : "example", + "description" : "Value of descriptive member characteristic; e.g. red, male, pneumonia, Caucasian, etc." + }, + "mapping" : [{ + "identity" : "rim", + "map" : "./value" + }] + }, + { + "id" : "Group.characteristic.exclude", + "path" : "Group.characteristic.exclude", + "short" : "Group includes or excludes", + "definition" : "If true, indicates the characteristic is one that is NOT held by members of the group.", + "comment" : "This is labeled as \"Is Modifier\" because applications cannot wrongly include excluded members as included or vice versa.", + "requirements" : "Sometimes group membership is determined by characteristics not possessed.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Group.characteristic.exclude", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "boolean" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "./valueNegationInd" + }] + }, + { + "id" : "Group.characteristic.period", + "path" : "Group.characteristic.period", + "short" : "Period over which characteristic is tested", + "definition" : "The period over which the characteristic is tested; e.g. the patient had an operation during the month of June.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Group.characteristic.period", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Period" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "Group.member", + "path" : "Group.member", + "short" : "Who or what is in group", + "definition" : "Identifies the resource instances that are members of the group.", + "requirements" : "Often the only thing of interest about a group is \"who's in it\".", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Group.member", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "condition" : ["grp-1"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "./scopedRole[isNormalRole() and classCode=\"MBR\"]/player" + }] + }, + { + "id" : "Group.member.id", + "path" : "Group.member.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Group.member.extension", + "path" : "Group.member.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Group.member.modifierExtension", + "path" : "Group.member.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Group.member.entity", + "path" : "Group.member.entity", + "short" : "Reference to the group member", + "definition" : "A reference to the entity that is a member of the group. Must be consistent with Group.type. If the entity is another group, then the type must be the same.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Group.member.entity", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Patient"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "Group.member.period", + "path" : "Group.member.period", + "short" : "Period member belonged to the group", + "definition" : "The period that the member was in the group, if known.", + "requirements" : "Need to track who was in a group at a particular time.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Group.member.period", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Period" + }], + "meaningWhenMissing" : "The member is in the group at this time", + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "Group.member.inactive", + "path" : "Group.member.inactive", + "short" : "If member is no longer in group", + "definition" : "A flag to indicate that the member is no longer in the group, but previously may have been a member.", + "requirements" : "Sometimes you don't know when someone stopped being in a group, but not when.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Group.member.inactive", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "boolean" + }], + "meaningWhenMissing" : "Members are considered active unless explicitly specified otherwise", + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false + }] + }, + "differential" : { + "element" : [{ + "id" : "Group", + "path" : "Group" + }, + { + "id" : "Group.type", + "path" : "Group.type", + "patternCode" : "person" + }, + { + "id" : "Group.actual", + "path" : "Group.actual", + "patternBoolean" : true + }, + { + "id" : "Group.code", + "path" : "Group.code", + "patternCodeableConcept" : { + "coding" : [{ + "system" : "http://snomed.info/sct", + "code" : "44807982", + "display" : "Participant in research study" + }] + } + }, + { + "id" : "Group.quantity", + "path" : "Group.quantity", + "min" : 1 + }, + { + "id" : "Group.member.entity", + "path" : "Group.member.entity", + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Patient"] + }] + }] + } } \ No newline at end of file diff --git a/StructureDefinition-study-group.profile.history.html b/StructureDefinition-study-group.profile.history.html index 7c6cda75..9fbe38b5 100644 --- a/StructureDefinition-study-group.profile.history.html +++ b/StructureDefinition-study-group.profile.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -298,7 +298,7 @@ <h2 id="root">Resource Profile: StudyGroup - Change History</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -356,7 +356,7 @@ <h2 id="root">Resource Profile: StudyGroup - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-group.profile.json.html b/StructureDefinition-study-group.profile.json.html index 57e7978d..92719fa6 100644 --- a/StructureDefinition-study-group.profile.json.html +++ b/StructureDefinition-study-group.profile.json.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: StudyGroup - JSON Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -342,7 +342,7 @@ <h2 id="root">Resource Profile: StudyGroup - JSON Profile</h2> "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a>" : "StudyGroup", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a>" : "NCPI Study Group", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a>" : "draft", - "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>" : [ { @@ -1866,7 +1866,7 @@ <h2 id="root">Resource Profile: StudyGroup - JSON Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-group.profile.ttl.html b/StructureDefinition-study-group.profile.ttl.html index 12fd7207..12fd1ec4 100644 --- a/StructureDefinition-study-group.profile.ttl.html +++ b/StructureDefinition-study-group.profile.ttl.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: StudyGroup - TTL Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -330,11 +330,11 @@ <h2 id="root">Resource Profile: StudyGroup - TTL Profile</h2> a fhir:StructureDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "study-group"]; + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "study-group"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description &amp; Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group\">Group</a><a name=\"Group\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/group.html\">Group</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Group of multiple entities</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.type\">type</a><a name=\"Group.type\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">person | animal | practitioner | device | medication | substance</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">person</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.actual\">actual</a><a name=\"Group.actual\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#boolean\">boolean</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Descriptive or actual</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">true</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.code\">code</a><a name=\"Group.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Kind of Group members</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck101.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#CodeableConcept.coding\">coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..*</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Code defined by a terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">(complex)</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">http://snomed.info/sct</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">44807982</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">Participant in research study</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.quantity\">quantity</a><a name=\"Group.quantity\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#unsignedInt\">unsignedInt</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Number of members</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck01.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.member\">member</a><a name=\"Group.member\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.member.entity\">entity</a><a name=\"Group.member.entity\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/patient.html\">Patient</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Reference to the group member</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -343,14 +343,14 @@ <h2 id="root">Resource Profile: StudyGroup - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "business" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "StudyGroup"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI Study Group"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "StudyGroup"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI Study Group"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">fhir:StructureDefinition.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -366,9 +366,9 @@ <h2 id="root">Resource Profile: StudyGroup - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Grouping subject participation within a research study is helpful to provide definitive lists of participants that fit a specific criteria such as *All Participants* or *Participants From a Particular Consent Group*, etc. "]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Grouping subject participation within a research study is helpful to provide definitive lists of participants that fit a specific criteria such as *All Participants* or *Participants From a Particular Consent Group*, etc. "]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping">fhir:StructureDefinition.mapping</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "rim" ]; @@ -379,15 +379,15 @@ <h2 id="root">Resource Profile: StudyGroup - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "w5" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.uri">fhir:StructureDefinition.mapping.uri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/fivews" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.name">fhir:StructureDefinition.mapping.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "FiveWs Pattern Mapping" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Group"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.baseDefinition">fhir:StructureDefinition.baseDefinition</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/Group"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/Group> - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot">fhir:StructureDefinition.snapshot</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot.element">fhir:StructureDefinition.snapshot.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -1594,7 +1594,7 @@ <h2 id="root">Resource Profile: StudyGroup - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/Element> ] ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.isModifier">fhir:ElementDefinition.isModifier</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.isSummary">fhir:ElementDefinition.isSummary</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential">fhir:StructureDefinition.differential</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential.element">fhir:StructureDefinition.differential.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -1632,7 +1632,7 @@ <h2 id="root">Resource Profile: StudyGroup - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/Patient"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/Patient> ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -1694,7 +1694,7 @@ <h2 id="root">Resource Profile: StudyGroup - TTL Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-group.profile.xml.html b/StructureDefinition-study-group.profile.xml.html index 4e0a8338..2ec0bf0c 100644 --- a/StructureDefinition-study-group.profile.xml.html +++ b/StructureDefinition-study-group.profile.xml.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: StudyGroup - XML Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -352,7 +352,7 @@ <h2 id="root">Resource Profile: StudyGroup - XML Profile</h2> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="StudyGroup"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI Study Group"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> - <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -1749,7 +1749,7 @@ <h2 id="root">Resource Profile: StudyGroup - XML Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-group.ttl b/StructureDefinition-study-group.ttl index 1c72a364..ed7ecb00 100644 --- a/StructureDefinition-study-group.ttl +++ b/StructureDefinition-study-group.ttl @@ -8,11 +8,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group> a fhir:StructureDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "study-group"]; + fhir:Resource.id [ fhir:value "study-group"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group\">Group</a><a name=\"Group\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/group.html\">Group</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Group of multiple entities</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.type\">type</a><a name=\"Group.type\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">person | animal | practitioner | device | medication | substance</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">person</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.actual\">actual</a><a name=\"Group.actual\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#boolean\">boolean</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Descriptive or actual</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">true</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.code\">code</a><a name=\"Group.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Kind of Group members</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck101.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#CodeableConcept.coding\">coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..*</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Code defined by a terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">(complex)</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">http://snomed.info/sct</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">44807982</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">Participant in research study</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.quantity\">quantity</a><a name=\"Group.quantity\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#unsignedInt\">unsignedInt</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Number of members</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck01.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.member\">member</a><a name=\"Group.member\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-group-definitions.html#Group.member.entity\">entity</a><a name=\"Group.member.entity\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/patient.html\">Patient</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Reference to the group member</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -21,14 +21,14 @@ fhir:index 1; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; fhir:Extension.valueCode [ fhir:value "business" ] - ]; - fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group"]; - fhir:StructureDefinition.version [ fhir:value "0.2.0"]; - fhir:StructureDefinition.name [ fhir:value "StudyGroup"]; - fhir:StructureDefinition.title [ fhir:value "NCPI Study Group"]; - fhir:StructureDefinition.status [ fhir:value "draft"]; - fhir:StructureDefinition.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group"]; # + fhir:StructureDefinition.version [ fhir:value "0.2.0"]; # + fhir:StructureDefinition.name [ fhir:value "StudyGroup"]; # + fhir:StructureDefinition.title [ fhir:value "NCPI Study Group"]; # + fhir:StructureDefinition.status [ fhir:value "draft"]; # + fhir:StructureDefinition.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:StructureDefinition.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -46,9 +46,9 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:StructureDefinition.description [ fhir:value "Grouping subject participation within a research study is helpful to provide definitive lists of participants that fit a specific criteria such as *All Participants* or *Participants From a Particular Consent Group*, etc. "]; - fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; + ]; # + fhir:StructureDefinition.description [ fhir:value "Grouping subject participation within a research study is helpful to provide definitive lists of participants that fit a specific criteria such as *All Participants* or *Participants From a Particular Consent Group*, etc. "]; # + fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; # fhir:StructureDefinition.mapping [ fhir:index 0; fhir:StructureDefinition.mapping.identity [ fhir:value "rim" ]; @@ -59,15 +59,15 @@ fhir:StructureDefinition.mapping.identity [ fhir:value "w5" ]; fhir:StructureDefinition.mapping.uri [ fhir:value "http://hl7.org/fhir/fivews" ]; fhir:StructureDefinition.mapping.name [ fhir:value "FiveWs Pattern Mapping" ] - ]; - fhir:StructureDefinition.kind [ fhir:value "resource"]; - fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; - fhir:StructureDefinition.type [ fhir:value "Group"]; + ]; # + fhir:StructureDefinition.kind [ fhir:value "resource"]; # + fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; # + fhir:StructureDefinition.type [ fhir:value "Group"]; # fhir:StructureDefinition.baseDefinition [ fhir:value "http://hl7.org/fhir/StructureDefinition/Group"; fhir:link <http://hl7.org/fhir/StructureDefinition/Group> - ]; - fhir:StructureDefinition.derivation [ fhir:value "constraint"]; + ]; # + fhir:StructureDefinition.derivation [ fhir:value "constraint"]; # fhir:StructureDefinition.snapshot [ fhir:StructureDefinition.snapshot.element [ fhir:index 0; @@ -1532,7 +1532,7 @@ fhir:ElementDefinition.isModifier [ fhir:value "false"^^xsd:boolean ]; fhir:ElementDefinition.isSummary [ fhir:value "false"^^xsd:boolean ] ] - ]; + ]; # fhir:StructureDefinition.differential [ fhir:StructureDefinition.differential.element [ fhir:index 0; @@ -1580,7 +1580,7 @@ ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/StructureDefinition-study-group.xlsx b/StructureDefinition-study-group.xlsx index 2b4114a4..dd153ccc 100644 Binary files a/StructureDefinition-study-group.xlsx and b/StructureDefinition-study-group.xlsx differ diff --git a/StructureDefinition-study-group.xml b/StructureDefinition-study-group.xml index 480dd316..2d483588 100644 --- a/StructureDefinition-study-group.xml +++ b/StructureDefinition-study-group.xml @@ -27,7 +27,7 @@ <name value="StudyGroup"/> <title value="NCPI Study Group"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/StructureDefinition-study-summary-definitions.html b/StructureDefinition-study-summary-definitions.html index b26fe04f..f4aa966d 100644 --- a/StructureDefinition-study-summary-definitions.html +++ b/StructureDefinition-study-summary-definitions.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -287,7 +287,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -317,7 +317,8 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> </ul> <a name="tabs-diff"> </a> <div id="tabs-diff"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Observation"> </a><span style="color: grey">1.</span> <b>Observation</b><a href="#diff_Observation" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Observation.code"> </a><span style="color: grey">2.</span> <b>Observation.code</b><a href="#diff_Observation.code" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..?</td></tr> @@ -325,10 +326,10 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..?</td></tr> <tr><td>Pattern Value</td><td><valueCoding xmlns="http://hl7.org/fhir"><br/>  <system value="https://uts.nlm.nih.gov/uts/umls"/><br/>  <code value="C0242482"/><br/>  <display value="Summary Report"/><br/></valueCoding><br/></td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Observation.subject"> </a><span style="color: grey">4.</span> <b>Observation.subject</b><a href="#diff_Observation.subject" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-study-group.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group">StudyGroup</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/location.html" title="http://hl7.org/fhir/StructureDefinition/Location">Location</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-study-group.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group">StudyGroup</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/location.html" title="http://hl7.org/fhir/StructureDefinition/Location">Location</a></span>)</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Observation.focus"> </a><span style="color: grey">5.</span> <b>Observation.focus</b><a href="#diff_Observation.focus" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>*</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-ncpi-research-study.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study">NcpiResearchStudy</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-ncpi-research-study.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study">NcpiResearchStudy</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>)</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Observation.component"> </a><span style="color: grey">6.</span> <b>Observation.component</b><a href="#diff_Observation.component" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>*</span></td></tr> </table> @@ -336,7 +337,8 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> </div> <a name="tabs-key"> </a> <div id="tabs-key"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="key_Observation"> </a><span style="color: grey">1.</span> <b>Observation</b><a href="#key_Observation" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><span style='color:DarkGray'><p>Measurements and simple assertions made about a patient, device or other subject.</p> </span></td></tr> @@ -414,7 +416,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> <tr><td>Definition</td><td><span style='color:DarkGray'><p>The patient, or group of patients, location, or device this observation is about and into whose record the observation is placed. If the actual focus of the observation is different from the subject (or a sample of, part, or region of the subject), the <code>focus</code> element or the <code>code</code> itself specifies the actual focus of the observation.</p> </span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td><span style='color:DarkGray'>0</span>..<span style='color:DarkGray'>1</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-study-group.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group">StudyGroup</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/location.html" title="http://hl7.org/fhir/StructureDefinition/Location">Location</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-study-group.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group">StudyGroup</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/location.html" title="http://hl7.org/fhir/StructureDefinition/Location">Location</a></span>)</td></tr> <tr><td>Requirements</td><td><span style='color:DarkGray'><p>Observations have no value if you don't know who or what they're about.</p> </span></td></tr> <tr><td>Comments</td><td><span style='color:DarkGray'><p>One would expect this element to be a cardinality of 1..1. The only circumstance in which the subject can be missing is when the observation is made by a device that does not know the patient. In this case, the observation SHALL be matched to a patient through some context/channel matching technique, and at this point, the observation should be updated.</p> @@ -425,7 +427,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> <tr><td>Definition</td><td><span style='color:DarkGray'><p>The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.</p> </span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>*</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-ncpi-research-study.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study">NcpiResearchStudy</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-ncpi-research-study.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study">NcpiResearchStudy</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>)</td></tr> <tr><td>Comments</td><td><span style='color:DarkGray'><p>Typically, an observation is made about the subject - a patient, or group of patients, location, or device - and the distinction between the subject and what is directly measured for an observation is specified in the observation code itself ( e.g., "Blood Glucose") and does not need to be represented separately using this element. Use <code>specimen</code> if a reference to a specimen is required. If a code is required instead of a resource use either <code>bodysite</code> for bodysites or the standard extension <a href="http://hl7.org/fhir/R4/extension-observation-focuscode.html">focusCode</a>.</p> </span></td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -473,12 +475,13 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> </div> <a name="tabs-snap"> </a> <div id="tabs-snap"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Observation"> </a><span style="color: grey">1.</span> <b>Observation</b><a href="#Observation" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>Measurements and simple assertions made about a patient, device or other subject.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Vital SignsMeasurementResultsTests</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Vital Signs, Measurement, Results, Tests</td></tr> <tr><td>Comments</td><td><p>Used for simple observations such as device measurements, laboratory atomic results, vital signs, height, weight, smoking status, comments, etc. Other resources are used to provide context for observations such as laboratory reports, etc.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Observation.id"> </a><span style="color: grey">2.</span> <b>Observation.id</b><a href="#Observation.id" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -522,7 +525,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#Narrative">Narrative</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrativehtmlxhtmldisplay</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrative, html, xhtml, display</td></tr> <tr><td>Comments</td><td><p>Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a "text blob" or where text is additionally entered raw or narrated and encoded information is added later.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -532,7 +535,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/resource.html">Resource</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resourcesanonymous resourcescontained resources</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resources, anonymous resources, contained resources</td></tr> <tr><td>Comments</td><td><p>This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Observation.extension"> </a><span style="color: grey">8.</span> <b>Observation.extension</b><a href="#Observation.extension" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -540,7 +543,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -554,7 +557,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -573,7 +576,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>A plan, proposal or order that is fulfilled in whole or in part by this event. For example, a MedicationRequest may require a patient to have laboratory test performed before it is dispensed.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/careplan.html" title="http://hl7.org/fhir/StructureDefinition/CarePlan">CarePlan</a><a href="http://hl7.org/fhir/R4/devicerequest.html" title="http://hl7.org/fhir/StructureDefinition/DeviceRequest">DeviceRequest</a><a href="http://hl7.org/fhir/R4/immunizationrecommendation.html" title="http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation">ImmunizationRecommendation</a><a href="http://hl7.org/fhir/R4/medicationrequest.html" title="http://hl7.org/fhir/StructureDefinition/MedicationRequest">MedicationRequest</a><a href="http://hl7.org/fhir/R4/nutritionorder.html" title="http://hl7.org/fhir/StructureDefinition/NutritionOrder">NutritionOrder</a><a href="http://hl7.org/fhir/R4/servicerequest.html" title="http://hl7.org/fhir/StructureDefinition/ServiceRequest">ServiceRequest</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/careplan.html" title="http://hl7.org/fhir/StructureDefinition/CarePlan">CarePlan</a>|<a href="http://hl7.org/fhir/R4/devicerequest.html" title="http://hl7.org/fhir/StructureDefinition/DeviceRequest">DeviceRequest</a>|<a href="http://hl7.org/fhir/R4/immunizationrecommendation.html" title="http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation">ImmunizationRecommendation</a>|<a href="http://hl7.org/fhir/R4/medicationrequest.html" title="http://hl7.org/fhir/StructureDefinition/MedicationRequest">MedicationRequest</a>|<a href="http://hl7.org/fhir/R4/nutritionorder.html" title="http://hl7.org/fhir/StructureDefinition/NutritionOrder">NutritionOrder</a>|<a href="http://hl7.org/fhir/R4/servicerequest.html" title="http://hl7.org/fhir/StructureDefinition/ServiceRequest">ServiceRequest</a>)</td></tr> <tr><td>Requirements</td><td><p>Allows tracing of authorization for the event and tracking whether proposals/recommendations were acted upon.</p> </td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Fulfills</td></tr> @@ -583,7 +586,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>A larger event of which this particular Observation is a component or step. For example, an observation as part of a procedure.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/medicationadministration.html" title="http://hl7.org/fhir/StructureDefinition/MedicationAdministration">MedicationAdministration</a><a href="http://hl7.org/fhir/R4/medicationdispense.html" title="http://hl7.org/fhir/StructureDefinition/MedicationDispense">MedicationDispense</a><a href="http://hl7.org/fhir/R4/medicationstatement.html" title="http://hl7.org/fhir/StructureDefinition/MedicationStatement">MedicationStatement</a><a href="http://hl7.org/fhir/R4/procedure.html" title="http://hl7.org/fhir/StructureDefinition/Procedure">Procedure</a><a href="http://hl7.org/fhir/R4/immunization.html" title="http://hl7.org/fhir/StructureDefinition/Immunization">Immunization</a><a href="http://hl7.org/fhir/R4/imagingstudy.html" title="http://hl7.org/fhir/StructureDefinition/ImagingStudy">ImagingStudy</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/medicationadministration.html" title="http://hl7.org/fhir/StructureDefinition/MedicationAdministration">MedicationAdministration</a>|<a href="http://hl7.org/fhir/R4/medicationdispense.html" title="http://hl7.org/fhir/StructureDefinition/MedicationDispense">MedicationDispense</a>|<a href="http://hl7.org/fhir/R4/medicationstatement.html" title="http://hl7.org/fhir/StructureDefinition/MedicationStatement">MedicationStatement</a>|<a href="http://hl7.org/fhir/R4/procedure.html" title="http://hl7.org/fhir/StructureDefinition/Procedure">Procedure</a>|<a href="http://hl7.org/fhir/R4/immunization.html" title="http://hl7.org/fhir/StructureDefinition/Immunization">Immunization</a>|<a href="http://hl7.org/fhir/R4/imagingstudy.html" title="http://hl7.org/fhir/StructureDefinition/ImagingStudy">ImagingStudy</a>)</td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Container</td></tr> <tr><td>Comments</td><td><p>To link an Observation to an Encounter use <code>encounter</code>. See the <a href="http://hl7.org/fhir/R4/observation.html#obsgrouping">Notes</a> below for guidance on referencing another Observation.</p> </td></tr> @@ -644,7 +647,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -677,7 +680,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The patient, or group of patients, location, or device this observation is about and into whose record the observation is placed. If the actual focus of the observation is different from the subject (or a sample of, part, or region of the subject), the <code>focus</code> element or the <code>code</code> itself specifies the actual focus of the observation.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="StructureDefinition-study-group.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group">StudyGroup</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="StructureDefinition-study-group.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group">StudyGroup</a>)</td></tr> <tr><td>Requirements</td><td><p>Observations have no value if you don't know who or what they're about.</p> </td></tr> <tr><td>Comments</td><td><p>One would expect this element to be a cardinality of 1..1. The only circumstance in which the subject can be missing is when the observation is made by a device that does not know the patient. In this case, the observation SHALL be matched to a patient through some context/channel matching technique, and at this point, the observation should be updated.</p> @@ -688,7 +691,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="StructureDefinition-ncpi-research-study.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study">NcpiResearchStudy</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="StructureDefinition-ncpi-research-study.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study">NcpiResearchStudy</a>)</td></tr> <tr><td>Comments</td><td><p>Typically, an observation is made about the subject - a patient, or group of patients, location, or device - and the distinction between the subject and what is directly measured for an observation is specified in the observation code itself ( e.g., "Blood Glucose") and does not need to be represented separately using this element. Use <code>specimen</code> if a reference to a specimen is required. If a code is required instead of a resource use either <code>bodysite</code> for bodysites or the standard extension <a href="http://hl7.org/fhir/R4/extension-observation-focuscode.html">focusCode</a>.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -697,7 +700,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The healthcare event (e.g. a patient and healthcare provider interaction) during which this observation is made.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html" title="http://hl7.org/fhir/StructureDefinition/Encounter">Encounter</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html" title="http://hl7.org/fhir/StructureDefinition/Encounter">Encounter</a>)</td></tr> <tr><td>Requirements</td><td><p>For some observations it may be important to know the link between an observation and a particular encounter.</p> </td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Context</td></tr> @@ -731,7 +734,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Who was responsible for asserting the observed value as "true".</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a><a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a><a href="http://hl7.org/fhir/R4/careteam.html" title="http://hl7.org/fhir/StructureDefinition/CareTeam">CareTeam</a><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a><a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a>|<a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a>|<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>|<a href="http://hl7.org/fhir/R4/careteam.html" title="http://hl7.org/fhir/StructureDefinition/CareTeam">CareTeam</a>|<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>)</td></tr> <tr><td>Requirements</td><td><p>May give a degree of confidence in the observation and also indicates where follow-up questions should be directed.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -820,7 +823,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The specimen that was used when this observation was made.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/specimen.html" title="http://hl7.org/fhir/StructureDefinition/Specimen">Specimen</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/specimen.html" title="http://hl7.org/fhir/StructureDefinition/Specimen">Specimen</a>)</td></tr> <tr><td>Comments</td><td><p>Should only be used if not implicit in code found in <code>Observation.code</code>. Observations are not made on specimens themselves; they are made on a subject, but in many cases by the means of a specimen. Note that although specimens are often involved, they are not always tracked and reported explicitly. Also note that observation resources may be used in contexts that track the specimen explicitly (e.g. Diagnostic Report).</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -829,7 +832,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The device used to generate the observation data.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a><a href="http://hl7.org/fhir/R4/devicemetric.html" title="http://hl7.org/fhir/StructureDefinition/DeviceMetric">DeviceMetric</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a>|<a href="http://hl7.org/fhir/R4/devicemetric.html" title="http://hl7.org/fhir/StructureDefinition/DeviceMetric">DeviceMetric</a>)</td></tr> <tr><td>Comments</td><td><p>Note that this is not meant to represent a device involved in the transmission of the result, e.g., a gateway. Such devices may be documented using the Provenance resource where relevant.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -856,7 +859,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -870,7 +873,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -937,7 +940,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>This observation is a group observation (e.g. a battery, a panel of tests, a set of vital sign measurements) that includes the target as a member of the group.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a><a href="http://hl7.org/fhir/R4/questionnaireresponse.html" title="http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse">QuestionnaireResponse</a><a href="http://hl7.org/fhir/R4/molecularsequence.html" title="http://hl7.org/fhir/StructureDefinition/MolecularSequence">MolecularSequence</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a>|<a href="http://hl7.org/fhir/R4/questionnaireresponse.html" title="http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse">QuestionnaireResponse</a>|<a href="http://hl7.org/fhir/R4/molecularsequence.html" title="http://hl7.org/fhir/StructureDefinition/MolecularSequence">MolecularSequence</a>)</td></tr> <tr><td>Comments</td><td><p>When using this element, an observation will typically have either a value or a set of related resources, although both may be present in some cases. For a discussion on the ways Observations can assembled in groups together, see <a href="http://hl7.org/fhir/R4/observation.html#obsgrouping">Notes</a> below. Note that a system may calculate results from <a href="http://hl7.org/fhir/R4/questionnaireresponse.html">QuestionnaireResponse</a> into a final score and represent the score as an Observation.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -946,7 +949,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>The target resource that represents a measurement from which this observation value is derived. For example, a calculated anion gap or a fetal measurement based on an ultrasound image.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/documentreference.html" title="http://hl7.org/fhir/StructureDefinition/DocumentReference">DocumentReference</a><a href="http://hl7.org/fhir/R4/imagingstudy.html" title="http://hl7.org/fhir/StructureDefinition/ImagingStudy">ImagingStudy</a><a href="http://hl7.org/fhir/R4/media.html" title="http://hl7.org/fhir/StructureDefinition/Media">Media</a><a href="http://hl7.org/fhir/R4/questionnaireresponse.html" title="http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse">QuestionnaireResponse</a><a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a><a href="http://hl7.org/fhir/R4/molecularsequence.html" title="http://hl7.org/fhir/StructureDefinition/MolecularSequence">MolecularSequence</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/documentreference.html" title="http://hl7.org/fhir/StructureDefinition/DocumentReference">DocumentReference</a>|<a href="http://hl7.org/fhir/R4/imagingstudy.html" title="http://hl7.org/fhir/StructureDefinition/ImagingStudy">ImagingStudy</a>|<a href="http://hl7.org/fhir/R4/media.html" title="http://hl7.org/fhir/StructureDefinition/Media">Media</a>|<a href="http://hl7.org/fhir/R4/questionnaireresponse.html" title="http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse">QuestionnaireResponse</a>|<a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a>|<a href="http://hl7.org/fhir/R4/molecularsequence.html" title="http://hl7.org/fhir/StructureDefinition/MolecularSequence">MolecularSequence</a>)</td></tr> <tr><td>Comments</td><td><p>All the reference choices that are listed in this element can represent clinical observations and other measurements that may be the source for a derived value. The most common reference will be another Observation. For a discussion on the ways Observations can assembled in groups together, see <a href="http://hl7.org/fhir/R4/observation.html#obsgrouping">Notes</a> below.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -973,7 +976,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -987,7 +990,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -1115,7 +1118,7 @@ <h2 id="root">Resource Profile: StudySummary - Detailed Descriptions</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-summary-examples.html b/StructureDefinition-study-summary-examples.html index 24155752..1065190d 100644 --- a/StructureDefinition-study-summary-examples.html +++ b/StructureDefinition-study-summary-examples.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -287,7 +287,7 @@ <h2 id="root">Resource Profile: StudySummary - Examples</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -357,7 +357,7 @@ <h2 id="root">Resource Profile: StudySummary - Examples</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-summary-mappings.html b/StructureDefinition-study-summary-mappings.html index cc0f590d..6b0e5847 100644 --- a/StructureDefinition-study-summary-mappings.html +++ b/StructureDefinition-study-summary-mappings.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -287,7 +287,7 @@ <h2 id="root">Resource Profile: StudySummary - Mappings</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -508,7 +508,7 @@ <h2 id="root">Resource Profile: StudySummary - Mappings</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-summary-testing.html b/StructureDefinition-study-summary-testing.html index f7776176..302df27e 100644 --- a/StructureDefinition-study-summary-testing.html +++ b/StructureDefinition-study-summary-testing.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -287,7 +287,7 @@ <h2 id="root">Resource Profile: StudySummary - Testing</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -352,7 +352,7 @@ <h2 id="root">Resource Profile: StudySummary - Testing</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-summary.html b/StructureDefinition-study-summary.html index 0eebbf03..04243772 100644 --- a/StructureDefinition-study-summary.html +++ b/StructureDefinition-study-summary.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -311,7 +311,7 @@ <h2 id="root">Resource Profile: Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -1222,7 +1222,7 @@ <h3>Notes:</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-summary.json b/StructureDefinition-study-summary.json index 08385da3..b4cd574a 100644 --- a/StructureDefinition-study-summary.json +++ b/StructureDefinition-study-summary.json @@ -1,2950 +1,2510 @@ -{ - "resourceType": "StructureDefinition", - "id": "study-summary", - "text": { - "status": "extensions", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation\">Observation</a><a name=\"Observation\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observation.html\">Observation</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Measurements and simple assertions</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.code\">code</a><a name=\"Observation.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck101.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.code.coding\">coding</a><a name=\"Observation.code.coding\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Code defined by a terminology system</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">https://uts.nlm.nih.gov/uts/umls</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">C0242482</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">Summary Report</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.subject\">subject</a><a name=\"Observation.subject\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Who and/or what the observation is about</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.focus\">focus</a><a name=\"Observation.focus\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-ncpi-research-study.html\">NCPI Research Study</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">What the observation is about, when it is not about the subject of record</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.component\">component</a><a name=\"Observation.component\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#BackboneElement\">BackboneElement</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Component results</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - }, - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", - "valueString": "Clinical.Diagnostics" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", - "valueCode": "patient" - } - ], - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-summary", - "version": "0.2.0", - "name": "StudySummary", - "title": "Study Summary", - "status": "draft", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "An observation containing summary information about a study in it's entirety or one of it's subpopulations.", - "fhirVersion": "4.0.1", - "mapping": [ - { - "identity": "workflow", - "uri": "http://hl7.org/fhir/workflow", - "name": "Workflow Pattern" - }, - { - "identity": "sct-concept", - "uri": "http://snomed.info/conceptdomain", - "name": "SNOMED CT Concept Domain Binding" - }, - { - "identity": "v2", - "uri": "http://hl7.org/v2", - "name": "HL7 v2 Mapping" - }, - { - "identity": "rim", - "uri": "http://hl7.org/v3", - "name": "RIM Mapping" - }, - { - "identity": "w5", - "uri": "http://hl7.org/fhir/fivews", - "name": "FiveWs Pattern Mapping" - }, - { - "identity": "sct-attr", - "uri": "http://snomed.org/attributebinding", - "name": "SNOMED CT Attribute Binding" - } - ], - "kind": "resource", - "abstract": false, - "type": "Observation", - "baseDefinition": "http://hl7.org/fhir/StructureDefinition/Observation", - "derivation": "constraint", - "snapshot": { - "element": [ - { - "id": "Observation", - "path": "Observation", - "short": "Measurements and simple assertions", - "definition": "Measurements and simple assertions made about a patient, device or other subject.", - "comment": "Used for simple observations such as device measurements, laboratory atomic results, vital signs, height, weight, smoking status, comments, etc. Other resources are used to provide context for observations such as laboratory reports, etc.", - "alias": [ - "Vital Signs", - "Measurement", - "Results", - "Tests" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation", - "min": 0, - "max": "*" - }, - "constraint": [ - { - "key": "dom-2", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL NOT contain nested Resources", - "expression": "contained.contained.empty()", - "xpath": "not(parent::f:contained and f:contained)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-3", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", - "expression": "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", - "xpath": "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-4", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", - "expression": "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-5", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a security label", - "expression": "contained.meta.security.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:security))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", - "valueBoolean": true - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", - "valueMarkdown": "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." - } - ], - "key": "dom-6", - "severity": "warning", - "human": "A resource should have narrative for robust management", - "expression": "text.`div`.exists()", - "xpath": "exists(f:text/h:div)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "obs-6", - "severity": "error", - "human": "dataAbsentReason SHALL only be present if Observation.value[x] is not present", - "expression": "dataAbsentReason.empty() or value.empty()", - "xpath": "not(exists(f:dataAbsentReason)) or (not(exists(*[starts-with(local-name(.), 'value')])))", - "source": "http://hl7.org/fhir/StructureDefinition/Observation" - }, - { - "key": "obs-7", - "severity": "error", - "human": "If Observation.code is the same as an Observation.component.code then the value element associated with the code SHALL NOT be present", - "expression": "value.empty() or component.code.where(coding.intersect(%resource.code.coding).exists()).empty()", - "xpath": "not(f:*[starts-with(local-name(.), 'value')] and (for $coding in f:code/f:coding return f:component/f:code/f:coding[f:code/@value=$coding/f:code/@value] [f:system/@value=$coding/f:system/@value]))", - "source": "http://hl7.org/fhir/StructureDefinition/Observation" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Entity. Role, or Act" - }, - { - "identity": "workflow", - "map": "Event" - }, - { - "identity": "sct-concept", - "map": "< 363787002 |Observable entity|" - }, - { - "identity": "v2", - "map": "OBX" - }, - { - "identity": "rim", - "map": "Observation[classCode=OBS, moodCode=EVN]" - } - ] - }, - { - "id": "Observation.id", - "path": "Observation.id", - "short": "Logical id of this artifact", - "definition": "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", - "comment": "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "id" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "Observation.meta", - "path": "Observation.meta", - "short": "Metadata about the resource", - "definition": "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.meta", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Meta" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "Observation.implicitRules", - "path": "Observation.implicitRules", - "short": "A set of rules under which this content was created", - "definition": "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", - "comment": "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.implicitRules", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", - "isSummary": true - }, - { - "id": "Observation.language", - "path": "Observation.language", - "short": "Language of the resource content", - "definition": "The base language in which the resource is written.", - "comment": "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", - "min": 0, - "max": "1", - "base": { - "path": "Resource.language", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", - "valueCanonical": "http://hl7.org/fhir/ValueSet/all-languages" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "Language" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "preferred", - "description": "A human language.", - "valueSet": "http://hl7.org/fhir/ValueSet/languages" - } - }, - { - "id": "Observation.text", - "path": "Observation.text", - "short": "Text summary of the resource, for human interpretation", - "definition": "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", - "comment": "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", - "alias": [ - "narrative", - "html", - "xhtml", - "display" - ], - "min": 0, - "max": "1", - "base": { - "path": "DomainResource.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Narrative" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Act.text?" - } - ] - }, - { - "id": "Observation.contained", - "path": "Observation.contained", - "short": "Contained, inline Resources", - "definition": "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", - "comment": "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", - "alias": [ - "inline resources", - "anonymous resources", - "contained resources" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.contained", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Resource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.extension", - "path": "Observation.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.modifierExtension", - "path": "Observation.modifierExtension", - "short": "Extensions that cannot be ignored", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.identifier", - "path": "Observation.identifier", - "short": "Business Identifier for observation", - "definition": "A unique identifier assigned to this observation.", - "requirements": "Allows observations to be distinguished and referenced.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.identifier", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Identifier" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.identifier" - }, - { - "identity": "w5", - "map": "FiveWs.identifier" - }, - { - "identity": "v2", - "map": "OBX.21 For OBX segments from systems without OBX-21 support a combination of ORC/OBR and OBX must be negotiated between trading partners to uniquely identify the OBX segment. Depending on how V2 has been implemented each of these may be an option: 1) OBR-3 + OBX-3 + OBX-4 or 2) OBR-3 + OBR-4 + OBX-3 + OBX-4 or 2) some other way to uniquely ID the OBR/ORC + OBX-3 + OBX-4." - }, - { - "identity": "rim", - "map": "id" - } - ] - }, - { - "id": "Observation.basedOn", - "path": "Observation.basedOn", - "short": "Fulfills plan, proposal or order", - "definition": "A plan, proposal or order that is fulfilled in whole or in part by this event. For example, a MedicationRequest may require a patient to have laboratory test performed before it is dispensed.", - "requirements": "Allows tracing of authorization for the event and tracking whether proposals/recommendations were acted upon.", - "alias": [ - "Fulfills" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation.basedOn", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/CarePlan", - "http://hl7.org/fhir/StructureDefinition/DeviceRequest", - "http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation", - "http://hl7.org/fhir/StructureDefinition/MedicationRequest", - "http://hl7.org/fhir/StructureDefinition/NutritionOrder", - "http://hl7.org/fhir/StructureDefinition/ServiceRequest" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.basedOn" - }, - { - "identity": "v2", - "map": "ORC" - }, - { - "identity": "rim", - "map": ".inboundRelationship[typeCode=COMP].source[moodCode=EVN]" - } - ] - }, - { - "id": "Observation.partOf", - "path": "Observation.partOf", - "short": "Part of referenced event", - "definition": "A larger event of which this particular Observation is a component or step. For example, an observation as part of a procedure.", - "comment": "To link an Observation to an Encounter use `encounter`. See the [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below for guidance on referencing another Observation.", - "alias": [ - "Container" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation.partOf", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/MedicationAdministration", - "http://hl7.org/fhir/StructureDefinition/MedicationDispense", - "http://hl7.org/fhir/StructureDefinition/MedicationStatement", - "http://hl7.org/fhir/StructureDefinition/Procedure", - "http://hl7.org/fhir/StructureDefinition/Immunization", - "http://hl7.org/fhir/StructureDefinition/ImagingStudy" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.partOf" - }, - { - "identity": "v2", - "map": "Varies by domain" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=FLFS].target" - } - ] - }, - { - "id": "Observation.status", - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-display-hint", - "valueString": "default: final" - } - ], - "path": "Observation.status", - "short": "registered | preliminary | final | amended +", - "definition": "The status of the result value.", - "comment": "This element is labeled as a modifier because the status contains codes that mark the resource as not currently valid.", - "requirements": "Need to track the status of individual results. Some results are finalized before the whole report is finalized.", - "min": 1, - "max": "1", - "base": { - "path": "Observation.status", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid", - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationStatus" - } - ], - "strength": "required", - "description": "Codes providing the status of an observation.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-status|4.0.1" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.status" - }, - { - "identity": "w5", - "map": "FiveWs.status" - }, - { - "identity": "sct-concept", - "map": "< 445584004 |Report by finality status|" - }, - { - "identity": "v2", - "map": "OBX-11" - }, - { - "identity": "rim", - "map": "status Amended & Final are differentiated by whether it is the subject of a ControlAct event with a type of \"revise\"" - } - ] - }, - { - "id": "Observation.category", - "path": "Observation.category", - "short": "Classification of type of observation", - "definition": "A code that classifies the general type of observation being made.", - "comment": "In addition to the required category valueset, this element allows various categorization schemes based on the owner’s definition of the category and effectively multiple categories can be used at once. The level of granularity is defined by the category concepts in the value set.", - "requirements": "Used for filtering what observations are retrieved and displayed.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.category", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationCategory" - } - ], - "strength": "preferred", - "description": "Codes for high level observation categories.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-category" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.class" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=\"COMP].target[classCode=\"LIST\", moodCode=\"EVN\"].code" - } - ] - }, - { - "id": "Observation.code", - "path": "Observation.code", - "short": "Type of observation (code / type)", - "definition": "Describes what was observed. Sometimes this is called the observation \"name\".", - "comment": "*All* code-value and, if present, component.code-component.value pairs need to be taken into account to correctly understand the meaning of the observation.", - "requirements": "Knowing what kind of observation is being made is essential to understanding the observation.", - "alias": [ - "Name" - ], - "min": 1, - "max": "1", - "base": { - "path": "Observation.code", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationCode" - } - ], - "strength": "example", - "description": "Codes identifying names of simple observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-codes" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.code" - }, - { - "identity": "w5", - "map": "FiveWs.what[x]" - }, - { - "identity": "sct-concept", - "map": "< 363787002 |Observable entity| OR < 386053000 |Evaluation procedure|" - }, - { - "identity": "v2", - "map": "OBX-3" - }, - { - "identity": "rim", - "map": "code" - }, - { - "identity": "sct-attr", - "map": "116680003 |Is a|" - } - ] - }, - { - "id": "Observation.code.id", - "path": "Observation.code.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.code.extension", - "path": "Observation.code.extension", - "slicing": { - "discriminator": [ - { - "type": "value", - "path": "url" - } - ], - "description": "Extensions are always sliced by (at least) url", - "rules": "open" - }, - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.code.coding", - "path": "Observation.code.coding", - "short": "Code defined by a terminology system", - "definition": "A reference to a code defined by a terminology system.", - "comment": "Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.", - "requirements": "Allows for alternative encodings within a code system, and translations to other code systems.", - "min": 0, - "max": "*", - "base": { - "path": "CodeableConcept.coding", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Coding" - } - ], - "patternCoding": { - "system": "https://uts.nlm.nih.gov/uts/umls", - "code": "C0242482", - "display": "Summary Report" - }, - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "C*E.1-8, C*E.10-22" - }, - { - "identity": "rim", - "map": "union(., ./translation)" - }, - { - "identity": "orim", - "map": "fhir:CodeableConcept.coding rdfs:subPropertyOf dt:CD.coding" - } - ] - }, - { - "id": "Observation.code.text", - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable", - "valueBoolean": true - } - ], - "path": "Observation.code.text", - "short": "Plain text representation of the concept", - "definition": "A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user.", - "comment": "Very often the text is the same as a displayName of one of the codings.", - "requirements": "The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source.", - "min": 0, - "max": "1", - "base": { - "path": "CodeableConcept.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "C*E.9. But note many systems use C*E.2 for this" - }, - { - "identity": "rim", - "map": "./originalText[mediaType/code=\"text/plain\"]/data" - }, - { - "identity": "orim", - "map": "fhir:CodeableConcept.text rdfs:subPropertyOf dt:CD.originalText" - } - ] - }, - { - "id": "Observation.subject", - "path": "Observation.subject", - "short": "Who and/or what the observation is about", - "definition": "The patient, or group of patients, location, or device this observation is about and into whose record the observation is placed. If the actual focus of the observation is different from the subject (or a sample of, part, or region of the subject), the `focus` element or the `code` itself specifies the actual focus of the observation.", - "comment": "One would expect this element to be a cardinality of 1..1. The only circumstance in which the subject can be missing is when the observation is made by a device that does not know the patient. In this case, the observation SHALL be matched to a patient through some context/channel matching technique, and at this point, the observation should be updated.", - "requirements": "Observations have no value if you don't know who or what they're about.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.subject", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.subject" - }, - { - "identity": "w5", - "map": "FiveWs.subject[x]" - }, - { - "identity": "v2", - "map": "PID-3" - }, - { - "identity": "rim", - "map": "participation[typeCode=RTGT]" - }, - { - "identity": "w5", - "map": "FiveWs.subject" - } - ] - }, - { - "id": "Observation.focus", - "path": "Observation.focus", - "short": "What the observation is about, when it is not about the subject of record", - "definition": "The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.", - "comment": "Typically, an observation is made about the subject - a patient, or group of patients, location, or device - and the distinction between the subject and what is directly measured for an observation is specified in the observation code itself ( e.g., \"Blood Glucose\") and does not need to be represented separately using this element. Use `specimen` if a reference to a specimen is required. If a code is required instead of a resource use either `bodysite` for bodysites or the standard extension [focusCode](http://hl7.org/fhir/R4/extension-observation-focuscode.html).", - "min": 1, - "max": "*", - "base": { - "path": "Observation.focus", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.subject[x]" - }, - { - "identity": "v2", - "map": "OBX-3" - }, - { - "identity": "rim", - "map": "participation[typeCode=SBJ]" - }, - { - "identity": "w5", - "map": "FiveWs.subject" - } - ] - }, - { - "id": "Observation.encounter", - "path": "Observation.encounter", - "short": "Healthcare event during which this observation is made", - "definition": "The healthcare event (e.g. a patient and healthcare provider interaction) during which this observation is made.", - "comment": "This will typically be the encounter the event occurred within, but some events may be initiated prior to or after the official completion of an encounter but still be tied to the context of the encounter (e.g. pre-admission laboratory tests).", - "requirements": "For some observations it may be important to know the link between an observation and a particular encounter.", - "alias": [ - "Context" - ], - "min": 0, - "max": "1", - "base": { - "path": "Observation.encounter", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Encounter" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.context" - }, - { - "identity": "w5", - "map": "FiveWs.context" - }, - { - "identity": "v2", - "map": "PV1" - }, - { - "identity": "rim", - "map": "inboundRelationship[typeCode=COMP].source[classCode=ENC, moodCode=EVN]" - } - ] - }, - { - "id": "Observation.effective[x]", - "path": "Observation.effective[x]", - "short": "Clinically relevant time/time-period for observation", - "definition": "The time or time-period the observed value is asserted as being true. For biological subjects - e.g. human patients - this is usually called the \"physiologically relevant time\". This is usually either the time of the procedure or of specimen collection, but very often the source of the date/time is not known, only the date/time itself.", - "comment": "At least a date should be present unless this observation is a historical report. For recording imprecise or \"fuzzy\" times (For example, a blood glucose measurement taken \"after breakfast\") use the [Timing](http://hl7.org/fhir/R4/datatypes.html#timing) datatype which allow the measurement to be tied to regular life events.", - "requirements": "Knowing when an observation was deemed true is important to its relevance as well as determining trends.", - "alias": [ - "Occurrence" - ], - "min": 0, - "max": "1", - "base": { - "path": "Observation.effective[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "dateTime" - }, - { - "code": "Period" - }, - { - "code": "Timing" - }, - { - "code": "instant" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.occurrence[x]" - }, - { - "identity": "w5", - "map": "FiveWs.done[x]" - }, - { - "identity": "v2", - "map": "OBX-14, and/or OBX-19 after v2.4 (depends on who observation made)" - }, - { - "identity": "rim", - "map": "effectiveTime" - } - ] - }, - { - "id": "Observation.issued", - "path": "Observation.issued", - "short": "Date/Time this version was made available", - "definition": "The date and time this version of the observation was made available to providers, typically after the results have been reviewed and verified.", - "comment": "For Observations that don’t require review and verification, it may be the same as the [`lastUpdated` ](http://hl7.org/fhir/R4/resource-definitions.html#Meta.lastUpdated) time of the resource itself. For Observations that do require review and verification for certain updates, it might not be the same as the `lastUpdated` time of the resource itself due to a non-clinically significant update that doesn’t require the new version to be reviewed and verified again.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.issued", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "instant" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.recorded" - }, - { - "identity": "v2", - "map": "OBR.22 (or MSH.7), or perhaps OBX-19 (depends on who observation made)" - }, - { - "identity": "rim", - "map": "participation[typeCode=AUT].time" - } - ] - }, - { - "id": "Observation.performer", - "path": "Observation.performer", - "short": "Who is responsible for the observation", - "definition": "Who was responsible for asserting the observed value as \"true\".", - "requirements": "May give a degree of confidence in the observation and also indicates where follow-up questions should be directed.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.performer", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Practitioner", - "http://hl7.org/fhir/StructureDefinition/PractitionerRole", - "http://hl7.org/fhir/StructureDefinition/Organization", - "http://hl7.org/fhir/StructureDefinition/CareTeam", - "http://hl7.org/fhir/StructureDefinition/Patient", - "http://hl7.org/fhir/StructureDefinition/RelatedPerson" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.performer.actor" - }, - { - "identity": "w5", - "map": "FiveWs.actor" - }, - { - "identity": "v2", - "map": "OBX.15 / (Practitioner) OBX-16, PRT-5:PRT-4='RO' / (Device) OBX-18 , PRT-10:PRT-4='EQUIP' / (Organization) OBX-23, PRT-8:PRT-4='PO'" - }, - { - "identity": "rim", - "map": "participation[typeCode=PRF]" - } - ] - }, - { - "id": "Observation.value[x]", - "path": "Observation.value[x]", - "short": "Actual result", - "definition": "The information determined as a result of making the observation, if the information has a simple value.", - "comment": "An observation may have; 1) a single value here, 2) both a value and a set of related or component values, or 3) only a set of related or component values. If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", - "requirements": "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.value[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Quantity" - }, - { - "code": "CodeableConcept" - }, - { - "code": "string" - }, - { - "code": "boolean" - }, - { - "code": "integer" - }, - { - "code": "Range" - }, - { - "code": "Ratio" - }, - { - "code": "SampledData" - }, - { - "code": "time" - }, - { - "code": "dateTime" - }, - { - "code": "Period" - } - ], - "condition": [ - "obs-7" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 441742003 |Evaluation finding|" - }, - { - "identity": "v2", - "map": "OBX.2, OBX.5, OBX.6" - }, - { - "identity": "rim", - "map": "value" - }, - { - "identity": "sct-attr", - "map": "363714003 |Interprets|" - } - ] - }, - { - "id": "Observation.dataAbsentReason", - "path": "Observation.dataAbsentReason", - "short": "Why the result is missing", - "definition": "Provides a reason why the expected value in the element Observation.value[x] is missing.", - "comment": "Null or exceptional values can be represented two ways in FHIR Observations. One way is to simply include them in the value set and represent the exceptions in the value. For example, measurement values for a serology test could be \"detected\", \"not detected\", \"inconclusive\", or \"specimen unsatisfactory\". \n\nThe alternate way is to use the value element for actual observations and use the explicit dataAbsentReason element to record exceptional values. For example, the dataAbsentReason code \"error\" could be used when the measurement was not completed. Note that an observation may only be reported if there are values to report. For example differential cell counts values may be reported only when > 0. Because of these options, use-case agreements are required to interpret general observations for null or exceptional values.", - "requirements": "For many results it is necessary to handle exceptional values in measurements.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.dataAbsentReason", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "obs-6" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationValueAbsentReason" - } - ], - "strength": "extensible", - "description": "Codes specifying why the result (`Observation.value[x]`) is missing.", - "valueSet": "http://hl7.org/fhir/ValueSet/data-absent-reason" - }, - "mapping": [ - { - "identity": "v2", - "map": "N/A" - }, - { - "identity": "rim", - "map": "value.nullFlavor" - } - ] - }, - { - "id": "Observation.interpretation", - "path": "Observation.interpretation", - "short": "High, low, normal, etc.", - "definition": "A categorical assessment of an observation value. For example, high, low, normal.", - "comment": "Historically used for laboratory results (known as 'abnormal flag' ), its use extends to other use cases where coded interpretations are relevant. Often reported as one or more simple compact codes this element is often placed adjacent to the result value in reports and flow sheets to signal the meaning/normalcy status of the result.", - "requirements": "For some results, particularly numeric results, an interpretation is necessary to fully understand the significance of a result.", - "alias": [ - "Abnormal Flag" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation.interpretation", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationInterpretation" - } - ], - "strength": "extensible", - "description": "Codes identifying interpretations of observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-interpretation" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 260245000 |Findings values|" - }, - { - "identity": "v2", - "map": "OBX-8" - }, - { - "identity": "rim", - "map": "interpretationCode" - }, - { - "identity": "sct-attr", - "map": "363713009 |Has interpretation|" - } - ] - }, - { - "id": "Observation.note", - "path": "Observation.note", - "short": "Comments about the observation", - "definition": "Comments about the observation or the results.", - "comment": "May include general statements about the observation, or statements about significant, unexpected or unreliable results values, or information about its source when relevant to its interpretation.", - "requirements": "Need to be able to provide free text additional information.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.note", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Annotation" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "NTE.3 (partner NTE to OBX, or sometimes another (child?) OBX)" - }, - { - "identity": "rim", - "map": "subjectOf.observationEvent[code=\"annotation\"].value" - } - ] - }, - { - "id": "Observation.bodySite", - "path": "Observation.bodySite", - "short": "Observed body part", - "definition": "Indicates the site on the subject's body where the observation was made (i.e. the target site).", - "comment": "Only used if not implicit in code found in Observation.code. In many systems, this may be represented as a related observation instead of an inline component. \n\nIf the use case requires BodySite to be handled as a separate resource (e.g. to identify and track separately) then use the standard extension[ bodySite](http://hl7.org/fhir/R4/extension-bodysite.html).", - "min": 0, - "max": "1", - "base": { - "path": "Observation.bodySite", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "BodySite" - } - ], - "strength": "example", - "description": "Codes describing anatomical locations. May include laterality.", - "valueSet": "http://hl7.org/fhir/ValueSet/body-site" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 123037004 |Body structure|" - }, - { - "identity": "v2", - "map": "OBX-20" - }, - { - "identity": "rim", - "map": "targetSiteCode" - }, - { - "identity": "sct-attr", - "map": "718497002 |Inherent location|" - } - ] - }, - { - "id": "Observation.method", - "path": "Observation.method", - "short": "How it was done", - "definition": "Indicates the mechanism used to perform the observation.", - "comment": "Only used if not implicit in code for Observation.code.", - "requirements": "In some cases, method can impact results and is thus used for determining whether results can be compared or determining significance of results.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.method", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationMethod" - } - ], - "strength": "example", - "description": "Methods for simple observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-methods" - }, - "mapping": [ - { - "identity": "v2", - "map": "OBX-17" - }, - { - "identity": "rim", - "map": "methodCode" - } - ] - }, - { - "id": "Observation.specimen", - "path": "Observation.specimen", - "short": "Specimen used for this observation", - "definition": "The specimen that was used when this observation was made.", - "comment": "Should only be used if not implicit in code found in `Observation.code`. Observations are not made on specimens themselves; they are made on a subject, but in many cases by the means of a specimen. Note that although specimens are often involved, they are not always tracked and reported explicitly. Also note that observation resources may be used in contexts that track the specimen explicitly (e.g. Diagnostic Report).", - "min": 0, - "max": "1", - "base": { - "path": "Observation.specimen", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Specimen" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 123038009 |Specimen|" - }, - { - "identity": "v2", - "map": "SPM segment" - }, - { - "identity": "rim", - "map": "participation[typeCode=SPC].specimen" - }, - { - "identity": "sct-attr", - "map": "704319004 |Inherent in|" - } - ] - }, - { - "id": "Observation.device", - "path": "Observation.device", - "short": "(Measurement) Device", - "definition": "The device used to generate the observation data.", - "comment": "Note that this is not meant to represent a device involved in the transmission of the result, e.g., a gateway. Such devices may be documented using the Provenance resource where relevant.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.device", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Device", - "http://hl7.org/fhir/StructureDefinition/DeviceMetric" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 49062001 |Device|" - }, - { - "identity": "v2", - "map": "OBX-17 / PRT -10" - }, - { - "identity": "rim", - "map": "participation[typeCode=DEV]" - }, - { - "identity": "sct-attr", - "map": "424226004 |Using device|" - } - ] - }, - { - "id": "Observation.referenceRange", - "path": "Observation.referenceRange", - "short": "Provides guide for interpretation", - "definition": "Guidance on how to interpret the value by comparison to a normal or recommended range. Multiple reference ranges are interpreted as an \"OR\". In other words, to represent two distinct target populations, two `referenceRange` elements would be used.", - "comment": "Most observations only have one generic reference range. Systems MAY choose to restrict to only supplying the relevant reference range based on knowledge about the patient (e.g., specific to the patient's age, gender, weight and other factors), but this might not be possible or appropriate. Whenever more than one reference range is supplied, the differences between them SHOULD be provided in the reference range and/or age properties.", - "requirements": "Knowing what values are considered \"normal\" can help evaluate the significance of a particular result. Need to be able to provide multiple reference ranges for different contexts.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.referenceRange", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "obs-3", - "severity": "error", - "human": "Must have at least a low or a high or text", - "expression": "low.exists() or high.exists() or text.exists()", - "xpath": "(exists(f:low) or exists(f:high)or exists(f:text))", - "source": "http://hl7.org/fhir/StructureDefinition/Observation" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX.7" - }, - { - "identity": "rim", - "map": "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" - } - ] - }, - { - "id": "Observation.referenceRange.id", - "path": "Observation.referenceRange.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.referenceRange.extension", - "path": "Observation.referenceRange.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.referenceRange.modifierExtension", - "path": "Observation.referenceRange.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.referenceRange.low", - "path": "Observation.referenceRange.low", - "short": "Low Range, if relevant", - "definition": "The value of the low bound of the reference range. The low bound of the reference range endpoint is inclusive of the value (e.g. reference range is >=5 - <=9). If the low bound is omitted, it is assumed to be meaningless (e.g. reference range is <=2.3).", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.low", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Quantity", - "profile": [ - "http://hl7.org/fhir/StructureDefinition/SimpleQuantity" - ] - } - ], - "condition": [ - "obs-3" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX-7" - }, - { - "identity": "rim", - "map": "value:IVL_PQ.low" - } - ] - }, - { - "id": "Observation.referenceRange.high", - "path": "Observation.referenceRange.high", - "short": "High Range, if relevant", - "definition": "The value of the high bound of the reference range. The high bound of the reference range endpoint is inclusive of the value (e.g. reference range is >=5 - <=9). If the high bound is omitted, it is assumed to be meaningless (e.g. reference range is >= 2.3).", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.high", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Quantity", - "profile": [ - "http://hl7.org/fhir/StructureDefinition/SimpleQuantity" - ] - } - ], - "condition": [ - "obs-3" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX-7" - }, - { - "identity": "rim", - "map": "value:IVL_PQ.high" - } - ] - }, - { - "id": "Observation.referenceRange.type", - "path": "Observation.referenceRange.type", - "short": "Reference range qualifier", - "definition": "Codes to indicate the what part of the targeted reference population it applies to. For example, the normal or therapeutic range.", - "comment": "This SHOULD be populated if there is more than one range. If this element is not present then the normal range is assumed.", - "requirements": "Need to be able to say what kind of reference range this is - normal, recommended, therapeutic, etc., - for proper interpretation.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.type", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationRangeMeaning" - } - ], - "strength": "preferred", - "description": "Code for the meaning of a reference range.", - "valueSet": "http://hl7.org/fhir/ValueSet/referencerange-meaning" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 260245000 |Findings values| OR \r< 365860008 |General clinical state finding| \rOR \r< 250171008 |Clinical history or observation findings| OR \r< 415229000 |Racial group| OR \r< 365400002 |Finding of puberty stage| OR\r< 443938003 |Procedure carried out on subject|" - }, - { - "identity": "v2", - "map": "OBX-10" - }, - { - "identity": "rim", - "map": "interpretationCode" - } - ] - }, - { - "id": "Observation.referenceRange.appliesTo", - "path": "Observation.referenceRange.appliesTo", - "short": "Reference range population", - "definition": "Codes to indicate the target population this reference range applies to. For example, a reference range may be based on the normal population or a particular sex or race. Multiple `appliesTo` are interpreted as an \"AND\" of the target populations. For example, to represent a target population of African American females, both a code of female and a code for African American would be used.", - "comment": "This SHOULD be populated if there is more than one range. If this element is not present then the normal population is assumed.", - "requirements": "Need to be able to identify the target population for proper interpretation.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.referenceRange.appliesTo", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationRangeType" - } - ], - "strength": "example", - "description": "Codes identifying the population the reference range applies to.", - "valueSet": "http://hl7.org/fhir/ValueSet/referencerange-appliesto" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 260245000 |Findings values| OR \r< 365860008 |General clinical state finding| \rOR \r< 250171008 |Clinical history or observation findings| OR \r< 415229000 |Racial group| OR \r< 365400002 |Finding of puberty stage| OR\r< 443938003 |Procedure carried out on subject|" - }, - { - "identity": "v2", - "map": "OBX-10" - }, - { - "identity": "rim", - "map": "interpretationCode" - } - ] - }, - { - "id": "Observation.referenceRange.age", - "path": "Observation.referenceRange.age", - "short": "Applicable age range, if relevant", - "definition": "The age at which this reference range is applicable. This is a neonatal age (e.g. number of weeks at term) if the meaning says so.", - "requirements": "Some analytes vary greatly over age.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.age", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Range" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "outboundRelationship[typeCode=PRCN].targetObservationCriterion[code=\"age\"].value" - } - ] - }, - { - "id": "Observation.referenceRange.text", - "path": "Observation.referenceRange.text", - "short": "Text based reference range in an observation", - "definition": "Text based reference range in an observation which may be used when a quantitative range is not appropriate for an observation. An example would be a reference value of \"Negative\" or a list or table of \"normals\".", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX-7" - }, - { - "identity": "rim", - "map": "value:ST" - } - ] - }, - { - "id": "Observation.hasMember", - "path": "Observation.hasMember", - "short": "Related resource that belongs to the Observation group", - "definition": "This observation is a group observation (e.g. a battery, a panel of tests, a set of vital sign measurements) that includes the target as a member of the group.", - "comment": "When using this element, an observation will typically have either a value or a set of related resources, although both may be present in some cases. For a discussion on the ways Observations can assembled in groups together, see [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below. Note that a system may calculate results from [QuestionnaireResponse](http://hl7.org/fhir/R4/questionnaireresponse.html) into a final score and represent the score as an Observation.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.hasMember", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Observation", - "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse", - "http://hl7.org/fhir/StructureDefinition/MolecularSequence" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "Relationships established by OBX-4 usage" - }, - { - "identity": "rim", - "map": "outBoundRelationship" - } - ] - }, - { - "id": "Observation.derivedFrom", - "path": "Observation.derivedFrom", - "short": "Related measurements the observation is made from", - "definition": "The target resource that represents a measurement from which this observation value is derived. For example, a calculated anion gap or a fetal measurement based on an ultrasound image.", - "comment": "All the reference choices that are listed in this element can represent clinical observations and other measurements that may be the source for a derived value. The most common reference will be another Observation. For a discussion on the ways Observations can assembled in groups together, see [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.derivedFrom", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/DocumentReference", - "http://hl7.org/fhir/StructureDefinition/ImagingStudy", - "http://hl7.org/fhir/StructureDefinition/Media", - "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse", - "http://hl7.org/fhir/StructureDefinition/Observation", - "http://hl7.org/fhir/StructureDefinition/MolecularSequence" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "Relationships established by OBX-4 usage" - }, - { - "identity": "rim", - "map": ".targetObservation" - } - ] - }, - { - "id": "Observation.component", - "path": "Observation.component", - "short": "Component results", - "definition": "Some observations have multiple component observations. These component observations are expressed as separate code value pairs that share the same attributes. Examples include systolic and diastolic component observations for blood pressure measurement and multiple component observations for genetics observations.", - "comment": "For a discussion on the ways Observations can be assembled in groups together see [Notes](http://hl7.org/fhir/R4/observation.html#notes) below.", - "requirements": "Component observations share the same attributes in the Observation resource as the primary observation and are always treated a part of a single observation (they are not separable). However, the reference range for the primary observation value is not inherited by the component values and is required when appropriate for each component observation.", - "min": 1, - "max": "*", - "base": { - "path": "Observation.component", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "containment by OBX-4?" - }, - { - "identity": "rim", - "map": "outBoundRelationship[typeCode=COMP]" - } - ] - }, - { - "id": "Observation.component.id", - "path": "Observation.component.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.component.extension", - "path": "Observation.component.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.component.modifierExtension", - "path": "Observation.component.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.component.code", - "path": "Observation.component.code", - "short": "Type of component observation (code / type)", - "definition": "Describes what was observed. Sometimes this is called the observation \"code\".", - "comment": "*All* code-value and component.code-component.value pairs need to be taken into account to correctly understand the meaning of the observation.", - "requirements": "Knowing what kind of observation is being made is essential to understanding the observation.", - "min": 1, - "max": "1", - "base": { - "path": "Observation.component.code", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationCode" - } - ], - "strength": "example", - "description": "Codes identifying names of simple observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-codes" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.what[x]" - }, - { - "identity": "sct-concept", - "map": "< 363787002 |Observable entity| OR \r< 386053000 |Evaluation procedure|" - }, - { - "identity": "v2", - "map": "OBX-3" - }, - { - "identity": "rim", - "map": "code" - } - ] - }, - { - "id": "Observation.component.value[x]", - "path": "Observation.component.value[x]", - "short": "Actual component result", - "definition": "The information determined as a result of making the observation, if the information has a simple value.", - "comment": "Used when observation has a set of component observations. An observation may have both a value (e.g. an Apgar score) and component observations (the observations from which the Apgar score was derived). If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", - "requirements": "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.component.value[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Quantity" - }, - { - "code": "CodeableConcept" - }, - { - "code": "string" - }, - { - "code": "boolean" - }, - { - "code": "integer" - }, - { - "code": "Range" - }, - { - "code": "Ratio" - }, - { - "code": "SampledData" - }, - { - "code": "time" - }, - { - "code": "dateTime" - }, - { - "code": "Period" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "sct-concept", - "map": "363714003 |Interprets| < 441742003 |Evaluation finding|" - }, - { - "identity": "v2", - "map": "OBX.2, OBX.5, OBX.6" - }, - { - "identity": "rim", - "map": "value" - }, - { - "identity": "sct-attr", - "map": "363714003 |Interprets|" - } - ] - }, - { - "id": "Observation.component.dataAbsentReason", - "path": "Observation.component.dataAbsentReason", - "short": "Why the component result is missing", - "definition": "Provides a reason why the expected value in the element Observation.component.value[x] is missing.", - "comment": "\"Null\" or exceptional values can be represented two ways in FHIR Observations. One way is to simply include them in the value set and represent the exceptions in the value. For example, measurement values for a serology test could be \"detected\", \"not detected\", \"inconclusive\", or \"test not done\". \n\nThe alternate way is to use the value element for actual observations and use the explicit dataAbsentReason element to record exceptional values. For example, the dataAbsentReason code \"error\" could be used when the measurement was not completed. Because of these options, use-case agreements are required to interpret general observations for exceptional values.", - "requirements": "For many results it is necessary to handle exceptional values in measurements.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.component.dataAbsentReason", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "obs-6" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationValueAbsentReason" - } - ], - "strength": "extensible", - "description": "Codes specifying why the result (`Observation.value[x]`) is missing.", - "valueSet": "http://hl7.org/fhir/ValueSet/data-absent-reason" - }, - "mapping": [ - { - "identity": "v2", - "map": "N/A" - }, - { - "identity": "rim", - "map": "value.nullFlavor" - } - ] - }, - { - "id": "Observation.component.interpretation", - "path": "Observation.component.interpretation", - "short": "High, low, normal, etc.", - "definition": "A categorical assessment of an observation value. For example, high, low, normal.", - "comment": "Historically used for laboratory results (known as 'abnormal flag' ), its use extends to other use cases where coded interpretations are relevant. Often reported as one or more simple compact codes this element is often placed adjacent to the result value in reports and flow sheets to signal the meaning/normalcy status of the result.", - "requirements": "For some results, particularly numeric results, an interpretation is necessary to fully understand the significance of a result.", - "alias": [ - "Abnormal Flag" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation.component.interpretation", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationInterpretation" - } - ], - "strength": "extensible", - "description": "Codes identifying interpretations of observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-interpretation" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 260245000 |Findings values|" - }, - { - "identity": "v2", - "map": "OBX-8" - }, - { - "identity": "rim", - "map": "interpretationCode" - }, - { - "identity": "sct-attr", - "map": "363713009 |Has interpretation|" - } - ] - }, - { - "id": "Observation.component.referenceRange", - "path": "Observation.component.referenceRange", - "short": "Provides guide for interpretation of component result", - "definition": "Guidance on how to interpret the value by comparison to a normal or recommended range.", - "comment": "Most observations only have one generic reference range. Systems MAY choose to restrict to only supplying the relevant reference range based on knowledge about the patient (e.g., specific to the patient's age, gender, weight and other factors), but this might not be possible or appropriate. Whenever more than one reference range is supplied, the differences between them SHOULD be provided in the reference range and/or age properties.", - "requirements": "Knowing what values are considered \"normal\" can help evaluate the significance of a particular result. Need to be able to provide multiple reference ranges for different contexts.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.component.referenceRange", - "min": 0, - "max": "*" - }, - "contentReference": "http://hl7.org/fhir/StructureDefinition/Observation#Observation.referenceRange", - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX.7" - }, - { - "identity": "rim", - "map": "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" - } - ] - } - ] - }, - "differential": { - "element": [ - { - "id": "Observation", - "path": "Observation" - }, - { - "id": "Observation.code.coding", - "path": "Observation.code.coding", - "patternCoding": { - "system": "https://uts.nlm.nih.gov/uts/umls", - "code": "C0242482", - "display": "Summary Report" - } - }, - { - "id": "Observation.subject", - "path": "Observation.subject", - "type": [ - { - "code": "Reference", - "targetProfile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group" - ] - } - ] - }, - { - "id": "Observation.focus", - "path": "Observation.focus", - "min": 1, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study" - ] - } - ] - }, - { - "id": "Observation.component", - "path": "Observation.component", - "min": 1 - } - ] - } +{ + "resourceType" : "StructureDefinition", + "id" : "study-summary", + "text" : { + "status" : "extensions", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation\">Observation</a><a name=\"Observation\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observation.html\">Observation</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Measurements and simple assertions</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.code\">code</a><a name=\"Observation.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck101.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.code.coding\">coding</a><a name=\"Observation.code.coding\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Code defined by a terminology system</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">https://uts.nlm.nih.gov/uts/umls</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">C0242482</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">Summary Report</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.subject\">subject</a><a name=\"Observation.subject\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Who and/or what the observation is about</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.focus\">focus</a><a name=\"Observation.focus\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-ncpi-research-study.html\">NCPI Research Study</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">What the observation is about, when it is not about the subject of record</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.component\">component</a><a name=\"Observation.component\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#BackboneElement\">BackboneElement</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Component results</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" + }, + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", + "valueString" : "Clinical.Diagnostics" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", + "valueCode" : "patient" + }], + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-summary", + "version" : "0.2.0", + "name" : "StudySummary", + "title" : "Study Summary", + "status" : "draft", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "An observation containing summary information about a study in it's entirety or one of it's subpopulations.", + "fhirVersion" : "4.0.1", + "mapping" : [{ + "identity" : "workflow", + "uri" : "http://hl7.org/fhir/workflow", + "name" : "Workflow Pattern" + }, + { + "identity" : "sct-concept", + "uri" : "http://snomed.info/conceptdomain", + "name" : "SNOMED CT Concept Domain Binding" + }, + { + "identity" : "v2", + "uri" : "http://hl7.org/v2", + "name" : "HL7 v2 Mapping" + }, + { + "identity" : "rim", + "uri" : "http://hl7.org/v3", + "name" : "RIM Mapping" + }, + { + "identity" : "w5", + "uri" : "http://hl7.org/fhir/fivews", + "name" : "FiveWs Pattern Mapping" + }, + { + "identity" : "sct-attr", + "uri" : "http://snomed.org/attributebinding", + "name" : "SNOMED CT Attribute Binding" + }], + "kind" : "resource", + "abstract" : false, + "type" : "Observation", + "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/Observation", + "derivation" : "constraint", + "snapshot" : { + "element" : [{ + "id" : "Observation", + "path" : "Observation", + "short" : "Measurements and simple assertions", + "definition" : "Measurements and simple assertions made about a patient, device or other subject.", + "comment" : "Used for simple observations such as device measurements, laboratory atomic results, vital signs, height, weight, smoking status, comments, etc. Other resources are used to provide context for observations such as laboratory reports, etc.", + "alias" : ["Vital Signs", + "Measurement", + "Results", + "Tests"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation", + "min" : 0, + "max" : "*" + }, + "constraint" : [{ + "key" : "dom-2", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL NOT contain nested Resources", + "expression" : "contained.contained.empty()", + "xpath" : "not(parent::f:contained and f:contained)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-3", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", + "expression" : "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", + "xpath" : "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-4", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", + "expression" : "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-5", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a security label", + "expression" : "contained.meta.security.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:security))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", + "valueBoolean" : true + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", + "valueMarkdown" : "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." + }], + "key" : "dom-6", + "severity" : "warning", + "human" : "A resource should have narrative for robust management", + "expression" : "text.`div`.exists()", + "xpath" : "exists(f:text/h:div)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "obs-6", + "severity" : "error", + "human" : "dataAbsentReason SHALL only be present if Observation.value[x] is not present", + "expression" : "dataAbsentReason.empty() or value.empty()", + "xpath" : "not(exists(f:dataAbsentReason)) or (not(exists(*[starts-with(local-name(.), 'value')])))", + "source" : "http://hl7.org/fhir/StructureDefinition/Observation" + }, + { + "key" : "obs-7", + "severity" : "error", + "human" : "If Observation.code is the same as an Observation.component.code then the value element associated with the code SHALL NOT be present", + "expression" : "value.empty() or component.code.where(coding.intersect(%resource.code.coding).exists()).empty()", + "xpath" : "not(f:*[starts-with(local-name(.), 'value')] and (for $coding in f:code/f:coding return f:component/f:code/f:coding[f:code/@value=$coding/f:code/@value] [f:system/@value=$coding/f:system/@value]))", + "source" : "http://hl7.org/fhir/StructureDefinition/Observation" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Entity. Role, or Act" + }, + { + "identity" : "workflow", + "map" : "Event" + }, + { + "identity" : "sct-concept", + "map" : "< 363787002 |Observable entity|" + }, + { + "identity" : "v2", + "map" : "OBX" + }, + { + "identity" : "rim", + "map" : "Observation[classCode=OBS, moodCode=EVN]" + }] + }, + { + "id" : "Observation.id", + "path" : "Observation.id", + "short" : "Logical id of this artifact", + "definition" : "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", + "comment" : "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "id" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "Observation.meta", + "path" : "Observation.meta", + "short" : "Metadata about the resource", + "definition" : "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.meta", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Meta" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "Observation.implicitRules", + "path" : "Observation.implicitRules", + "short" : "A set of rules under which this content was created", + "definition" : "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", + "comment" : "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.implicitRules", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", + "isSummary" : true + }, + { + "id" : "Observation.language", + "path" : "Observation.language", + "short" : "Language of the resource content", + "definition" : "The base language in which the resource is written.", + "comment" : "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.language", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", + "valueCanonical" : "http://hl7.org/fhir/ValueSet/all-languages" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "Language" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "preferred", + "description" : "A human language.", + "valueSet" : "http://hl7.org/fhir/ValueSet/languages" + } + }, + { + "id" : "Observation.text", + "path" : "Observation.text", + "short" : "Text summary of the resource, for human interpretation", + "definition" : "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", + "comment" : "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", + "alias" : ["narrative", + "html", + "xhtml", + "display"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "DomainResource.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Narrative" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Act.text?" + }] + }, + { + "id" : "Observation.contained", + "path" : "Observation.contained", + "short" : "Contained, inline Resources", + "definition" : "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", + "comment" : "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", + "alias" : ["inline resources", + "anonymous resources", + "contained resources"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.contained", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Resource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.extension", + "path" : "Observation.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.modifierExtension", + "path" : "Observation.modifierExtension", + "short" : "Extensions that cannot be ignored", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.identifier", + "path" : "Observation.identifier", + "short" : "Business Identifier for observation", + "definition" : "A unique identifier assigned to this observation.", + "requirements" : "Allows observations to be distinguished and referenced.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.identifier", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Identifier" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.identifier" + }, + { + "identity" : "w5", + "map" : "FiveWs.identifier" + }, + { + "identity" : "v2", + "map" : "OBX.21 For OBX segments from systems without OBX-21 support a combination of ORC/OBR and OBX must be negotiated between trading partners to uniquely identify the OBX segment. Depending on how V2 has been implemented each of these may be an option: 1) OBR-3 + OBX-3 + OBX-4 or 2) OBR-3 + OBR-4 + OBX-3 + OBX-4 or 2) some other way to uniquely ID the OBR/ORC + OBX-3 + OBX-4." + }, + { + "identity" : "rim", + "map" : "id" + }] + }, + { + "id" : "Observation.basedOn", + "path" : "Observation.basedOn", + "short" : "Fulfills plan, proposal or order", + "definition" : "A plan, proposal or order that is fulfilled in whole or in part by this event. For example, a MedicationRequest may require a patient to have laboratory test performed before it is dispensed.", + "requirements" : "Allows tracing of authorization for the event and tracking whether proposals/recommendations were acted upon.", + "alias" : ["Fulfills"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.basedOn", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/CarePlan", + "http://hl7.org/fhir/StructureDefinition/DeviceRequest", + "http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation", + "http://hl7.org/fhir/StructureDefinition/MedicationRequest", + "http://hl7.org/fhir/StructureDefinition/NutritionOrder", + "http://hl7.org/fhir/StructureDefinition/ServiceRequest"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.basedOn" + }, + { + "identity" : "v2", + "map" : "ORC" + }, + { + "identity" : "rim", + "map" : ".inboundRelationship[typeCode=COMP].source[moodCode=EVN]" + }] + }, + { + "id" : "Observation.partOf", + "path" : "Observation.partOf", + "short" : "Part of referenced event", + "definition" : "A larger event of which this particular Observation is a component or step. For example, an observation as part of a procedure.", + "comment" : "To link an Observation to an Encounter use `encounter`. See the [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below for guidance on referencing another Observation.", + "alias" : ["Container"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.partOf", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/MedicationAdministration", + "http://hl7.org/fhir/StructureDefinition/MedicationDispense", + "http://hl7.org/fhir/StructureDefinition/MedicationStatement", + "http://hl7.org/fhir/StructureDefinition/Procedure", + "http://hl7.org/fhir/StructureDefinition/Immunization", + "http://hl7.org/fhir/StructureDefinition/ImagingStudy"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.partOf" + }, + { + "identity" : "v2", + "map" : "Varies by domain" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=FLFS].target" + }] + }, + { + "id" : "Observation.status", + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-display-hint", + "valueString" : "default: final" + }], + "path" : "Observation.status", + "short" : "registered | preliminary | final | amended +", + "definition" : "The status of the result value.", + "comment" : "This element is labeled as a modifier because the status contains codes that mark the resource as not currently valid.", + "requirements" : "Need to track the status of individual results. Some results are finalized before the whole report is finalized.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Observation.status", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid", + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationStatus" + }], + "strength" : "required", + "description" : "Codes providing the status of an observation.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-status|4.0.1" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.status" + }, + { + "identity" : "w5", + "map" : "FiveWs.status" + }, + { + "identity" : "sct-concept", + "map" : "< 445584004 |Report by finality status|" + }, + { + "identity" : "v2", + "map" : "OBX-11" + }, + { + "identity" : "rim", + "map" : "status Amended & Final are differentiated by whether it is the subject of a ControlAct event with a type of \"revise\"" + }] + }, + { + "id" : "Observation.category", + "path" : "Observation.category", + "short" : "Classification of type of observation", + "definition" : "A code that classifies the general type of observation being made.", + "comment" : "In addition to the required category valueset, this element allows various categorization schemes based on the owner’s definition of the category and effectively multiple categories can be used at once. The level of granularity is defined by the category concepts in the value set.", + "requirements" : "Used for filtering what observations are retrieved and displayed.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.category", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationCategory" + }], + "strength" : "preferred", + "description" : "Codes for high level observation categories.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-category" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.class" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=\"COMP].target[classCode=\"LIST\", moodCode=\"EVN\"].code" + }] + }, + { + "id" : "Observation.code", + "path" : "Observation.code", + "short" : "Type of observation (code / type)", + "definition" : "Describes what was observed. Sometimes this is called the observation \"name\".", + "comment" : "*All* code-value and, if present, component.code-component.value pairs need to be taken into account to correctly understand the meaning of the observation.", + "requirements" : "Knowing what kind of observation is being made is essential to understanding the observation.", + "alias" : ["Name"], + "min" : 1, + "max" : "1", + "base" : { + "path" : "Observation.code", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationCode" + }], + "strength" : "example", + "description" : "Codes identifying names of simple observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-codes" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.code" + }, + { + "identity" : "w5", + "map" : "FiveWs.what[x]" + }, + { + "identity" : "sct-concept", + "map" : "< 363787002 |Observable entity| OR < 386053000 |Evaluation procedure|" + }, + { + "identity" : "v2", + "map" : "OBX-3" + }, + { + "identity" : "rim", + "map" : "code" + }, + { + "identity" : "sct-attr", + "map" : "116680003 |Is a|" + }] + }, + { + "id" : "Observation.code.id", + "path" : "Observation.code.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.code.extension", + "path" : "Observation.code.extension", + "slicing" : { + "discriminator" : [{ + "type" : "value", + "path" : "url" + }], + "description" : "Extensions are always sliced by (at least) url", + "rules" : "open" + }, + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.code.coding", + "path" : "Observation.code.coding", + "short" : "Code defined by a terminology system", + "definition" : "A reference to a code defined by a terminology system.", + "comment" : "Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.", + "requirements" : "Allows for alternative encodings within a code system, and translations to other code systems.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "CodeableConcept.coding", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Coding" + }], + "patternCoding" : { + "system" : "https://uts.nlm.nih.gov/uts/umls", + "code" : "C0242482", + "display" : "Summary Report" + }, + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "C*E.1-8, C*E.10-22" + }, + { + "identity" : "rim", + "map" : "union(., ./translation)" + }, + { + "identity" : "orim", + "map" : "fhir:CodeableConcept.coding rdfs:subPropertyOf dt:CD.coding" + }] + }, + { + "id" : "Observation.code.text", + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable", + "valueBoolean" : true + }], + "path" : "Observation.code.text", + "short" : "Plain text representation of the concept", + "definition" : "A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user.", + "comment" : "Very often the text is the same as a displayName of one of the codings.", + "requirements" : "The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "CodeableConcept.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "C*E.9. But note many systems use C*E.2 for this" + }, + { + "identity" : "rim", + "map" : "./originalText[mediaType/code=\"text/plain\"]/data" + }, + { + "identity" : "orim", + "map" : "fhir:CodeableConcept.text rdfs:subPropertyOf dt:CD.originalText" + }] + }, + { + "id" : "Observation.subject", + "path" : "Observation.subject", + "short" : "Who and/or what the observation is about", + "definition" : "The patient, or group of patients, location, or device this observation is about and into whose record the observation is placed. If the actual focus of the observation is different from the subject (or a sample of, part, or region of the subject), the `focus` element or the `code` itself specifies the actual focus of the observation.", + "comment" : "One would expect this element to be a cardinality of 1..1. The only circumstance in which the subject can be missing is when the observation is made by a device that does not know the patient. In this case, the observation SHALL be matched to a patient through some context/channel matching technique, and at this point, the observation should be updated.", + "requirements" : "Observations have no value if you don't know who or what they're about.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.subject", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.subject" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject[x]" + }, + { + "identity" : "v2", + "map" : "PID-3" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=RTGT]" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject" + }] + }, + { + "id" : "Observation.focus", + "path" : "Observation.focus", + "short" : "What the observation is about, when it is not about the subject of record", + "definition" : "The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.", + "comment" : "Typically, an observation is made about the subject - a patient, or group of patients, location, or device - and the distinction between the subject and what is directly measured for an observation is specified in the observation code itself ( e.g., \"Blood Glucose\") and does not need to be represented separately using this element. Use `specimen` if a reference to a specimen is required. If a code is required instead of a resource use either `bodysite` for bodysites or the standard extension [focusCode](http://hl7.org/fhir/R4/extension-observation-focuscode.html).", + "min" : 1, + "max" : "*", + "base" : { + "path" : "Observation.focus", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.subject[x]" + }, + { + "identity" : "v2", + "map" : "OBX-3" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=SBJ]" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject" + }] + }, + { + "id" : "Observation.encounter", + "path" : "Observation.encounter", + "short" : "Healthcare event during which this observation is made", + "definition" : "The healthcare event (e.g. a patient and healthcare provider interaction) during which this observation is made.", + "comment" : "This will typically be the encounter the event occurred within, but some events may be initiated prior to or after the official completion of an encounter but still be tied to the context of the encounter (e.g. pre-admission laboratory tests).", + "requirements" : "For some observations it may be important to know the link between an observation and a particular encounter.", + "alias" : ["Context"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.encounter", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Encounter"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.context" + }, + { + "identity" : "w5", + "map" : "FiveWs.context" + }, + { + "identity" : "v2", + "map" : "PV1" + }, + { + "identity" : "rim", + "map" : "inboundRelationship[typeCode=COMP].source[classCode=ENC, moodCode=EVN]" + }] + }, + { + "id" : "Observation.effective[x]", + "path" : "Observation.effective[x]", + "short" : "Clinically relevant time/time-period for observation", + "definition" : "The time or time-period the observed value is asserted as being true. For biological subjects - e.g. human patients - this is usually called the \"physiologically relevant time\". This is usually either the time of the procedure or of specimen collection, but very often the source of the date/time is not known, only the date/time itself.", + "comment" : "At least a date should be present unless this observation is a historical report. For recording imprecise or \"fuzzy\" times (For example, a blood glucose measurement taken \"after breakfast\") use the [Timing](http://hl7.org/fhir/R4/datatypes.html#timing) datatype which allow the measurement to be tied to regular life events.", + "requirements" : "Knowing when an observation was deemed true is important to its relevance as well as determining trends.", + "alias" : ["Occurrence"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.effective[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "dateTime" + }, + { + "code" : "Period" + }, + { + "code" : "Timing" + }, + { + "code" : "instant" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.occurrence[x]" + }, + { + "identity" : "w5", + "map" : "FiveWs.done[x]" + }, + { + "identity" : "v2", + "map" : "OBX-14, and/or OBX-19 after v2.4 (depends on who observation made)" + }, + { + "identity" : "rim", + "map" : "effectiveTime" + }] + }, + { + "id" : "Observation.issued", + "path" : "Observation.issued", + "short" : "Date/Time this version was made available", + "definition" : "The date and time this version of the observation was made available to providers, typically after the results have been reviewed and verified.", + "comment" : "For Observations that don’t require review and verification, it may be the same as the [`lastUpdated` ](http://hl7.org/fhir/R4/resource-definitions.html#Meta.lastUpdated) time of the resource itself. For Observations that do require review and verification for certain updates, it might not be the same as the `lastUpdated` time of the resource itself due to a non-clinically significant update that doesn’t require the new version to be reviewed and verified again.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.issued", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "instant" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.recorded" + }, + { + "identity" : "v2", + "map" : "OBR.22 (or MSH.7), or perhaps OBX-19 (depends on who observation made)" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=AUT].time" + }] + }, + { + "id" : "Observation.performer", + "path" : "Observation.performer", + "short" : "Who is responsible for the observation", + "definition" : "Who was responsible for asserting the observed value as \"true\".", + "requirements" : "May give a degree of confidence in the observation and also indicates where follow-up questions should be directed.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.performer", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Practitioner", + "http://hl7.org/fhir/StructureDefinition/PractitionerRole", + "http://hl7.org/fhir/StructureDefinition/Organization", + "http://hl7.org/fhir/StructureDefinition/CareTeam", + "http://hl7.org/fhir/StructureDefinition/Patient", + "http://hl7.org/fhir/StructureDefinition/RelatedPerson"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.performer.actor" + }, + { + "identity" : "w5", + "map" : "FiveWs.actor" + }, + { + "identity" : "v2", + "map" : "OBX.15 / (Practitioner) OBX-16, PRT-5:PRT-4='RO' / (Device) OBX-18 , PRT-10:PRT-4='EQUIP' / (Organization) OBX-23, PRT-8:PRT-4='PO'" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=PRF]" + }] + }, + { + "id" : "Observation.value[x]", + "path" : "Observation.value[x]", + "short" : "Actual result", + "definition" : "The information determined as a result of making the observation, if the information has a simple value.", + "comment" : "An observation may have; 1) a single value here, 2) both a value and a set of related or component values, or 3) only a set of related or component values. If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", + "requirements" : "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.value[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Quantity" + }, + { + "code" : "CodeableConcept" + }, + { + "code" : "string" + }, + { + "code" : "boolean" + }, + { + "code" : "integer" + }, + { + "code" : "Range" + }, + { + "code" : "Ratio" + }, + { + "code" : "SampledData" + }, + { + "code" : "time" + }, + { + "code" : "dateTime" + }, + { + "code" : "Period" + }], + "condition" : ["obs-7"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 441742003 |Evaluation finding|" + }, + { + "identity" : "v2", + "map" : "OBX.2, OBX.5, OBX.6" + }, + { + "identity" : "rim", + "map" : "value" + }, + { + "identity" : "sct-attr", + "map" : "363714003 |Interprets|" + }] + }, + { + "id" : "Observation.dataAbsentReason", + "path" : "Observation.dataAbsentReason", + "short" : "Why the result is missing", + "definition" : "Provides a reason why the expected value in the element Observation.value[x] is missing.", + "comment" : "Null or exceptional values can be represented two ways in FHIR Observations. One way is to simply include them in the value set and represent the exceptions in the value. For example, measurement values for a serology test could be \"detected\", \"not detected\", \"inconclusive\", or \"specimen unsatisfactory\". \n\nThe alternate way is to use the value element for actual observations and use the explicit dataAbsentReason element to record exceptional values. For example, the dataAbsentReason code \"error\" could be used when the measurement was not completed. Note that an observation may only be reported if there are values to report. For example differential cell counts values may be reported only when > 0. Because of these options, use-case agreements are required to interpret general observations for null or exceptional values.", + "requirements" : "For many results it is necessary to handle exceptional values in measurements.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.dataAbsentReason", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["obs-6"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationValueAbsentReason" + }], + "strength" : "extensible", + "description" : "Codes specifying why the result (`Observation.value[x]`) is missing.", + "valueSet" : "http://hl7.org/fhir/ValueSet/data-absent-reason" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "N/A" + }, + { + "identity" : "rim", + "map" : "value.nullFlavor" + }] + }, + { + "id" : "Observation.interpretation", + "path" : "Observation.interpretation", + "short" : "High, low, normal, etc.", + "definition" : "A categorical assessment of an observation value. For example, high, low, normal.", + "comment" : "Historically used for laboratory results (known as 'abnormal flag' ), its use extends to other use cases where coded interpretations are relevant. Often reported as one or more simple compact codes this element is often placed adjacent to the result value in reports and flow sheets to signal the meaning/normalcy status of the result.", + "requirements" : "For some results, particularly numeric results, an interpretation is necessary to fully understand the significance of a result.", + "alias" : ["Abnormal Flag"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.interpretation", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationInterpretation" + }], + "strength" : "extensible", + "description" : "Codes identifying interpretations of observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-interpretation" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 260245000 |Findings values|" + }, + { + "identity" : "v2", + "map" : "OBX-8" + }, + { + "identity" : "rim", + "map" : "interpretationCode" + }, + { + "identity" : "sct-attr", + "map" : "363713009 |Has interpretation|" + }] + }, + { + "id" : "Observation.note", + "path" : "Observation.note", + "short" : "Comments about the observation", + "definition" : "Comments about the observation or the results.", + "comment" : "May include general statements about the observation, or statements about significant, unexpected or unreliable results values, or information about its source when relevant to its interpretation.", + "requirements" : "Need to be able to provide free text additional information.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.note", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Annotation" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "NTE.3 (partner NTE to OBX, or sometimes another (child?) OBX)" + }, + { + "identity" : "rim", + "map" : "subjectOf.observationEvent[code=\"annotation\"].value" + }] + }, + { + "id" : "Observation.bodySite", + "path" : "Observation.bodySite", + "short" : "Observed body part", + "definition" : "Indicates the site on the subject's body where the observation was made (i.e. the target site).", + "comment" : "Only used if not implicit in code found in Observation.code. In many systems, this may be represented as a related observation instead of an inline component. \n\nIf the use case requires BodySite to be handled as a separate resource (e.g. to identify and track separately) then use the standard extension[ bodySite](http://hl7.org/fhir/R4/extension-bodysite.html).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.bodySite", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "BodySite" + }], + "strength" : "example", + "description" : "Codes describing anatomical locations. May include laterality.", + "valueSet" : "http://hl7.org/fhir/ValueSet/body-site" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 123037004 |Body structure|" + }, + { + "identity" : "v2", + "map" : "OBX-20" + }, + { + "identity" : "rim", + "map" : "targetSiteCode" + }, + { + "identity" : "sct-attr", + "map" : "718497002 |Inherent location|" + }] + }, + { + "id" : "Observation.method", + "path" : "Observation.method", + "short" : "How it was done", + "definition" : "Indicates the mechanism used to perform the observation.", + "comment" : "Only used if not implicit in code for Observation.code.", + "requirements" : "In some cases, method can impact results and is thus used for determining whether results can be compared or determining significance of results.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.method", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationMethod" + }], + "strength" : "example", + "description" : "Methods for simple observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-methods" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX-17" + }, + { + "identity" : "rim", + "map" : "methodCode" + }] + }, + { + "id" : "Observation.specimen", + "path" : "Observation.specimen", + "short" : "Specimen used for this observation", + "definition" : "The specimen that was used when this observation was made.", + "comment" : "Should only be used if not implicit in code found in `Observation.code`. Observations are not made on specimens themselves; they are made on a subject, but in many cases by the means of a specimen. Note that although specimens are often involved, they are not always tracked and reported explicitly. Also note that observation resources may be used in contexts that track the specimen explicitly (e.g. Diagnostic Report).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.specimen", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Specimen"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 123038009 |Specimen|" + }, + { + "identity" : "v2", + "map" : "SPM segment" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=SPC].specimen" + }, + { + "identity" : "sct-attr", + "map" : "704319004 |Inherent in|" + }] + }, + { + "id" : "Observation.device", + "path" : "Observation.device", + "short" : "(Measurement) Device", + "definition" : "The device used to generate the observation data.", + "comment" : "Note that this is not meant to represent a device involved in the transmission of the result, e.g., a gateway. Such devices may be documented using the Provenance resource where relevant.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.device", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Device", + "http://hl7.org/fhir/StructureDefinition/DeviceMetric"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 49062001 |Device|" + }, + { + "identity" : "v2", + "map" : "OBX-17 / PRT -10" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=DEV]" + }, + { + "identity" : "sct-attr", + "map" : "424226004 |Using device|" + }] + }, + { + "id" : "Observation.referenceRange", + "path" : "Observation.referenceRange", + "short" : "Provides guide for interpretation", + "definition" : "Guidance on how to interpret the value by comparison to a normal or recommended range. Multiple reference ranges are interpreted as an \"OR\". In other words, to represent two distinct target populations, two `referenceRange` elements would be used.", + "comment" : "Most observations only have one generic reference range. Systems MAY choose to restrict to only supplying the relevant reference range based on knowledge about the patient (e.g., specific to the patient's age, gender, weight and other factors), but this might not be possible or appropriate. Whenever more than one reference range is supplied, the differences between them SHOULD be provided in the reference range and/or age properties.", + "requirements" : "Knowing what values are considered \"normal\" can help evaluate the significance of a particular result. Need to be able to provide multiple reference ranges for different contexts.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.referenceRange", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "obs-3", + "severity" : "error", + "human" : "Must have at least a low or a high or text", + "expression" : "low.exists() or high.exists() or text.exists()", + "xpath" : "(exists(f:low) or exists(f:high)or exists(f:text))", + "source" : "http://hl7.org/fhir/StructureDefinition/Observation" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX.7" + }, + { + "identity" : "rim", + "map" : "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" + }] + }, + { + "id" : "Observation.referenceRange.id", + "path" : "Observation.referenceRange.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.referenceRange.extension", + "path" : "Observation.referenceRange.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.referenceRange.modifierExtension", + "path" : "Observation.referenceRange.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.referenceRange.low", + "path" : "Observation.referenceRange.low", + "short" : "Low Range, if relevant", + "definition" : "The value of the low bound of the reference range. The low bound of the reference range endpoint is inclusive of the value (e.g. reference range is >=5 - <=9). If the low bound is omitted, it is assumed to be meaningless (e.g. reference range is <=2.3).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.low", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Quantity", + "profile" : ["http://hl7.org/fhir/StructureDefinition/SimpleQuantity"] + }], + "condition" : ["obs-3"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX-7" + }, + { + "identity" : "rim", + "map" : "value:IVL_PQ.low" + }] + }, + { + "id" : "Observation.referenceRange.high", + "path" : "Observation.referenceRange.high", + "short" : "High Range, if relevant", + "definition" : "The value of the high bound of the reference range. The high bound of the reference range endpoint is inclusive of the value (e.g. reference range is >=5 - <=9). If the high bound is omitted, it is assumed to be meaningless (e.g. reference range is >= 2.3).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.high", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Quantity", + "profile" : ["http://hl7.org/fhir/StructureDefinition/SimpleQuantity"] + }], + "condition" : ["obs-3"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX-7" + }, + { + "identity" : "rim", + "map" : "value:IVL_PQ.high" + }] + }, + { + "id" : "Observation.referenceRange.type", + "path" : "Observation.referenceRange.type", + "short" : "Reference range qualifier", + "definition" : "Codes to indicate the what part of the targeted reference population it applies to. For example, the normal or therapeutic range.", + "comment" : "This SHOULD be populated if there is more than one range. If this element is not present then the normal range is assumed.", + "requirements" : "Need to be able to say what kind of reference range this is - normal, recommended, therapeutic, etc., - for proper interpretation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.type", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationRangeMeaning" + }], + "strength" : "preferred", + "description" : "Code for the meaning of a reference range.", + "valueSet" : "http://hl7.org/fhir/ValueSet/referencerange-meaning" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 260245000 |Findings values| OR \r< 365860008 |General clinical state finding| \rOR \r< 250171008 |Clinical history or observation findings| OR \r< 415229000 |Racial group| OR \r< 365400002 |Finding of puberty stage| OR\r< 443938003 |Procedure carried out on subject|" + }, + { + "identity" : "v2", + "map" : "OBX-10" + }, + { + "identity" : "rim", + "map" : "interpretationCode" + }] + }, + { + "id" : "Observation.referenceRange.appliesTo", + "path" : "Observation.referenceRange.appliesTo", + "short" : "Reference range population", + "definition" : "Codes to indicate the target population this reference range applies to. For example, a reference range may be based on the normal population or a particular sex or race. Multiple `appliesTo` are interpreted as an \"AND\" of the target populations. For example, to represent a target population of African American females, both a code of female and a code for African American would be used.", + "comment" : "This SHOULD be populated if there is more than one range. If this element is not present then the normal population is assumed.", + "requirements" : "Need to be able to identify the target population for proper interpretation.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.referenceRange.appliesTo", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationRangeType" + }], + "strength" : "example", + "description" : "Codes identifying the population the reference range applies to.", + "valueSet" : "http://hl7.org/fhir/ValueSet/referencerange-appliesto" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 260245000 |Findings values| OR \r< 365860008 |General clinical state finding| \rOR \r< 250171008 |Clinical history or observation findings| OR \r< 415229000 |Racial group| OR \r< 365400002 |Finding of puberty stage| OR\r< 443938003 |Procedure carried out on subject|" + }, + { + "identity" : "v2", + "map" : "OBX-10" + }, + { + "identity" : "rim", + "map" : "interpretationCode" + }] + }, + { + "id" : "Observation.referenceRange.age", + "path" : "Observation.referenceRange.age", + "short" : "Applicable age range, if relevant", + "definition" : "The age at which this reference range is applicable. This is a neonatal age (e.g. number of weeks at term) if the meaning says so.", + "requirements" : "Some analytes vary greatly over age.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.age", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Range" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "outboundRelationship[typeCode=PRCN].targetObservationCriterion[code=\"age\"].value" + }] + }, + { + "id" : "Observation.referenceRange.text", + "path" : "Observation.referenceRange.text", + "short" : "Text based reference range in an observation", + "definition" : "Text based reference range in an observation which may be used when a quantitative range is not appropriate for an observation. An example would be a reference value of \"Negative\" or a list or table of \"normals\".", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX-7" + }, + { + "identity" : "rim", + "map" : "value:ST" + }] + }, + { + "id" : "Observation.hasMember", + "path" : "Observation.hasMember", + "short" : "Related resource that belongs to the Observation group", + "definition" : "This observation is a group observation (e.g. a battery, a panel of tests, a set of vital sign measurements) that includes the target as a member of the group.", + "comment" : "When using this element, an observation will typically have either a value or a set of related resources, although both may be present in some cases. For a discussion on the ways Observations can assembled in groups together, see [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below. Note that a system may calculate results from [QuestionnaireResponse](http://hl7.org/fhir/R4/questionnaireresponse.html) into a final score and represent the score as an Observation.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.hasMember", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Observation", + "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse", + "http://hl7.org/fhir/StructureDefinition/MolecularSequence"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "Relationships established by OBX-4 usage" + }, + { + "identity" : "rim", + "map" : "outBoundRelationship" + }] + }, + { + "id" : "Observation.derivedFrom", + "path" : "Observation.derivedFrom", + "short" : "Related measurements the observation is made from", + "definition" : "The target resource that represents a measurement from which this observation value is derived. For example, a calculated anion gap or a fetal measurement based on an ultrasound image.", + "comment" : "All the reference choices that are listed in this element can represent clinical observations and other measurements that may be the source for a derived value. The most common reference will be another Observation. For a discussion on the ways Observations can assembled in groups together, see [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.derivedFrom", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/DocumentReference", + "http://hl7.org/fhir/StructureDefinition/ImagingStudy", + "http://hl7.org/fhir/StructureDefinition/Media", + "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse", + "http://hl7.org/fhir/StructureDefinition/Observation", + "http://hl7.org/fhir/StructureDefinition/MolecularSequence"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "Relationships established by OBX-4 usage" + }, + { + "identity" : "rim", + "map" : ".targetObservation" + }] + }, + { + "id" : "Observation.component", + "path" : "Observation.component", + "short" : "Component results", + "definition" : "Some observations have multiple component observations. These component observations are expressed as separate code value pairs that share the same attributes. Examples include systolic and diastolic component observations for blood pressure measurement and multiple component observations for genetics observations.", + "comment" : "For a discussion on the ways Observations can be assembled in groups together see [Notes](http://hl7.org/fhir/R4/observation.html#notes) below.", + "requirements" : "Component observations share the same attributes in the Observation resource as the primary observation and are always treated a part of a single observation (they are not separable). However, the reference range for the primary observation value is not inherited by the component values and is required when appropriate for each component observation.", + "min" : 1, + "max" : "*", + "base" : { + "path" : "Observation.component", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "containment by OBX-4?" + }, + { + "identity" : "rim", + "map" : "outBoundRelationship[typeCode=COMP]" + }] + }, + { + "id" : "Observation.component.id", + "path" : "Observation.component.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.component.extension", + "path" : "Observation.component.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.component.modifierExtension", + "path" : "Observation.component.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.component.code", + "path" : "Observation.component.code", + "short" : "Type of component observation (code / type)", + "definition" : "Describes what was observed. Sometimes this is called the observation \"code\".", + "comment" : "*All* code-value and component.code-component.value pairs need to be taken into account to correctly understand the meaning of the observation.", + "requirements" : "Knowing what kind of observation is being made is essential to understanding the observation.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Observation.component.code", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationCode" + }], + "strength" : "example", + "description" : "Codes identifying names of simple observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-codes" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.what[x]" + }, + { + "identity" : "sct-concept", + "map" : "< 363787002 |Observable entity| OR \r< 386053000 |Evaluation procedure|" + }, + { + "identity" : "v2", + "map" : "OBX-3" + }, + { + "identity" : "rim", + "map" : "code" + }] + }, + { + "id" : "Observation.component.value[x]", + "path" : "Observation.component.value[x]", + "short" : "Actual component result", + "definition" : "The information determined as a result of making the observation, if the information has a simple value.", + "comment" : "Used when observation has a set of component observations. An observation may have both a value (e.g. an Apgar score) and component observations (the observations from which the Apgar score was derived). If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", + "requirements" : "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.component.value[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Quantity" + }, + { + "code" : "CodeableConcept" + }, + { + "code" : "string" + }, + { + "code" : "boolean" + }, + { + "code" : "integer" + }, + { + "code" : "Range" + }, + { + "code" : "Ratio" + }, + { + "code" : "SampledData" + }, + { + "code" : "time" + }, + { + "code" : "dateTime" + }, + { + "code" : "Period" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "363714003 |Interprets| < 441742003 |Evaluation finding|" + }, + { + "identity" : "v2", + "map" : "OBX.2, OBX.5, OBX.6" + }, + { + "identity" : "rim", + "map" : "value" + }, + { + "identity" : "sct-attr", + "map" : "363714003 |Interprets|" + }] + }, + { + "id" : "Observation.component.dataAbsentReason", + "path" : "Observation.component.dataAbsentReason", + "short" : "Why the component result is missing", + "definition" : "Provides a reason why the expected value in the element Observation.component.value[x] is missing.", + "comment" : "\"Null\" or exceptional values can be represented two ways in FHIR Observations. One way is to simply include them in the value set and represent the exceptions in the value. For example, measurement values for a serology test could be \"detected\", \"not detected\", \"inconclusive\", or \"test not done\". \n\nThe alternate way is to use the value element for actual observations and use the explicit dataAbsentReason element to record exceptional values. For example, the dataAbsentReason code \"error\" could be used when the measurement was not completed. Because of these options, use-case agreements are required to interpret general observations for exceptional values.", + "requirements" : "For many results it is necessary to handle exceptional values in measurements.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.component.dataAbsentReason", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["obs-6"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationValueAbsentReason" + }], + "strength" : "extensible", + "description" : "Codes specifying why the result (`Observation.value[x]`) is missing.", + "valueSet" : "http://hl7.org/fhir/ValueSet/data-absent-reason" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "N/A" + }, + { + "identity" : "rim", + "map" : "value.nullFlavor" + }] + }, + { + "id" : "Observation.component.interpretation", + "path" : "Observation.component.interpretation", + "short" : "High, low, normal, etc.", + "definition" : "A categorical assessment of an observation value. For example, high, low, normal.", + "comment" : "Historically used for laboratory results (known as 'abnormal flag' ), its use extends to other use cases where coded interpretations are relevant. Often reported as one or more simple compact codes this element is often placed adjacent to the result value in reports and flow sheets to signal the meaning/normalcy status of the result.", + "requirements" : "For some results, particularly numeric results, an interpretation is necessary to fully understand the significance of a result.", + "alias" : ["Abnormal Flag"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.component.interpretation", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationInterpretation" + }], + "strength" : "extensible", + "description" : "Codes identifying interpretations of observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-interpretation" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 260245000 |Findings values|" + }, + { + "identity" : "v2", + "map" : "OBX-8" + }, + { + "identity" : "rim", + "map" : "interpretationCode" + }, + { + "identity" : "sct-attr", + "map" : "363713009 |Has interpretation|" + }] + }, + { + "id" : "Observation.component.referenceRange", + "path" : "Observation.component.referenceRange", + "short" : "Provides guide for interpretation of component result", + "definition" : "Guidance on how to interpret the value by comparison to a normal or recommended range.", + "comment" : "Most observations only have one generic reference range. Systems MAY choose to restrict to only supplying the relevant reference range based on knowledge about the patient (e.g., specific to the patient's age, gender, weight and other factors), but this might not be possible or appropriate. Whenever more than one reference range is supplied, the differences between them SHOULD be provided in the reference range and/or age properties.", + "requirements" : "Knowing what values are considered \"normal\" can help evaluate the significance of a particular result. Need to be able to provide multiple reference ranges for different contexts.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.component.referenceRange", + "min" : 0, + "max" : "*" + }, + "contentReference" : "http://hl7.org/fhir/StructureDefinition/Observation#Observation.referenceRange", + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX.7" + }, + { + "identity" : "rim", + "map" : "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" + }] + }] + }, + "differential" : { + "element" : [{ + "id" : "Observation", + "path" : "Observation" + }, + { + "id" : "Observation.code.coding", + "path" : "Observation.code.coding", + "patternCoding" : { + "system" : "https://uts.nlm.nih.gov/uts/umls", + "code" : "C0242482", + "display" : "Summary Report" + } + }, + { + "id" : "Observation.subject", + "path" : "Observation.subject", + "type" : [{ + "code" : "Reference", + "targetProfile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group"] + }] + }, + { + "id" : "Observation.focus", + "path" : "Observation.focus", + "min" : 1, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study"] + }] + }, + { + "id" : "Observation.component", + "path" : "Observation.component", + "min" : 1 + }] + } } \ No newline at end of file diff --git a/StructureDefinition-study-summary.profile.history.html b/StructureDefinition-study-summary.profile.history.html index 16ca72ed..d88bf70d 100644 --- a/StructureDefinition-study-summary.profile.history.html +++ b/StructureDefinition-study-summary.profile.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -288,7 +288,7 @@ <h2 id="root">Resource Profile: StudySummary - Change History</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -346,7 +346,7 @@ <h2 id="root">Resource Profile: StudySummary - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-summary.profile.json.html b/StructureDefinition-study-summary.profile.json.html index d5716c70..eddcb540 100644 --- a/StructureDefinition-study-summary.profile.json.html +++ b/StructureDefinition-study-summary.profile.json.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -291,7 +291,7 @@ <h2 id="root">Resource Profile: StudySummary - JSON Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -332,7 +332,7 @@ <h2 id="root">Resource Profile: StudySummary - JSON Profile</h2> "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a>" : "StudySummary", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a>" : "Study Summary", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a>" : "draft", - "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>" : [ { @@ -3313,7 +3313,7 @@ <h2 id="root">Resource Profile: StudySummary - JSON Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-summary.profile.ttl.html b/StructureDefinition-study-summary.profile.ttl.html index dfd0559d..fe26c73f 100644 --- a/StructureDefinition-study-summary.profile.ttl.html +++ b/StructureDefinition-study-summary.profile.ttl.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -291,7 +291,7 @@ <h2 id="root">Resource Profile: StudySummary - TTL Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -319,11 +319,11 @@ <h2 id="root">Resource Profile: StudySummary - TTL Profile</h2> a fhir:StructureDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "study-summary"]; + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "study-summary"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description &amp; Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation\">Observation</a><a name=\"Observation\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observation.html\">Observation</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Measurements and simple assertions</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.code\">code</a><a name=\"Observation.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck101.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.code.coding\">coding</a><a name=\"Observation.code.coding\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Code defined by a terminology system</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">https://uts.nlm.nih.gov/uts/umls</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">C0242482</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">Summary Report</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.subject\">subject</a><a name=\"Observation.subject\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Who and/or what the observation is about</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.focus\">focus</a><a name=\"Observation.focus\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-ncpi-research-study.html\">NCPI Research Study</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">What the observation is about, when it is not about the subject of record</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.component\">component</a><a name=\"Observation.component\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#BackboneElement\">BackboneElement</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Component results</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -332,14 +332,14 @@ <h2 id="root">Resource Profile: StudySummary - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "patient" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-summary"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "StudySummary"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Study Summary"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-summary"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "StudySummary"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Study Summary"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">fhir:StructureDefinition.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -355,9 +355,9 @@ <h2 id="root">Resource Profile: StudySummary - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "An observation containing summary information about a study in it's entirety or one of it's subpopulations."]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "An observation containing summary information about a study in it's entirety or one of it's subpopulations."]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping">fhir:StructureDefinition.mapping</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "workflow" ]; @@ -388,15 +388,15 @@ <h2 id="root">Resource Profile: StudySummary - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "sct-attr" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.uri">fhir:StructureDefinition.mapping.uri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://snomed.org/attributebinding" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.name">fhir:StructureDefinition.mapping.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "SNOMED CT Attribute Binding" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Observation"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Observation"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.baseDefinition">fhir:StructureDefinition.baseDefinition</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/Observation"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/Observation> - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot">fhir:StructureDefinition.snapshot</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot.element">fhir:StructureDefinition.snapshot.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2852,7 +2852,7 @@ <h2 id="root">Resource Profile: StudySummary - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.identity">fhir:ElementDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "rim" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.map">fhir:ElementDefinition.mapping.map</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" ] ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential">fhir:StructureDefinition.differential</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential.element">fhir:StructureDefinition.differential.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2890,7 +2890,7 @@ <h2 id="root">Resource Profile: StudySummary - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.id">fhir:Element.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Observation.component" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.path">fhir:ElementDefinition.path</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Observation.component" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.min">fhir:ElementDefinition.min</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "1"^^xsd:nonNegativeInteger ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -2952,7 +2952,7 @@ <h2 id="root">Resource Profile: StudySummary - TTL Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-summary.profile.xml.html b/StructureDefinition-study-summary.profile.xml.html index 58823fd3..0a0821ae 100644 --- a/StructureDefinition-study-summary.profile.xml.html +++ b/StructureDefinition-study-summary.profile.xml.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -291,7 +291,7 @@ <h2 id="root">Resource Profile: StudySummary - XML Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -340,7 +340,7 @@ <h2 id="root">Resource Profile: StudySummary - XML Profile</h2> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="StudySummary"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Study Summary"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> - <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -3109,7 +3109,7 @@ <h2 id="root">Resource Profile: StudySummary - XML Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-summary.ttl b/StructureDefinition-study-summary.ttl index 70a700a9..1a798c06 100644 --- a/StructureDefinition-study-summary.ttl +++ b/StructureDefinition-study-summary.ttl @@ -7,11 +7,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-summary> a fhir:StructureDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "study-summary"]; + fhir:Resource.id [ fhir:value "study-summary"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation\">Observation</a><a name=\"Observation\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observation.html\">Observation</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Measurements and simple assertions</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.code\">code</a><a name=\"Observation.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck101.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.code.coding\">coding</a><a name=\"Observation.code.coding\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Code defined by a terminology system</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">https://uts.nlm.nih.gov/uts/umls</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">C0242482</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">Summary Report</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.subject\">subject</a><a name=\"Observation.subject\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Who and/or what the observation is about</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.focus\">focus</a><a name=\"Observation.focus\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-ncpi-research-study.html\">NCPI Research Study</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">What the observation is about, when it is not about the subject of record</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-summary-definitions.html#Observation.component\">component</a><a name=\"Observation.component\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#BackboneElement\">BackboneElement</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Component results</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -20,14 +20,14 @@ fhir:index 1; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; fhir:Extension.valueCode [ fhir:value "patient" ] - ]; - fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-summary"]; - fhir:StructureDefinition.version [ fhir:value "0.2.0"]; - fhir:StructureDefinition.name [ fhir:value "StudySummary"]; - fhir:StructureDefinition.title [ fhir:value "Study Summary"]; - fhir:StructureDefinition.status [ fhir:value "draft"]; - fhir:StructureDefinition.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-summary"]; # + fhir:StructureDefinition.version [ fhir:value "0.2.0"]; # + fhir:StructureDefinition.name [ fhir:value "StudySummary"]; # + fhir:StructureDefinition.title [ fhir:value "Study Summary"]; # + fhir:StructureDefinition.status [ fhir:value "draft"]; # + fhir:StructureDefinition.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:StructureDefinition.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -45,9 +45,9 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:StructureDefinition.description [ fhir:value "An observation containing summary information about a study in it's entirety or one of it's subpopulations."]; - fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; + ]; # + fhir:StructureDefinition.description [ fhir:value "An observation containing summary information about a study in it's entirety or one of it's subpopulations."]; # + fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; # fhir:StructureDefinition.mapping [ fhir:index 0; fhir:StructureDefinition.mapping.identity [ fhir:value "workflow" ]; @@ -78,15 +78,15 @@ fhir:StructureDefinition.mapping.identity [ fhir:value "sct-attr" ]; fhir:StructureDefinition.mapping.uri [ fhir:value "http://snomed.org/attributebinding" ]; fhir:StructureDefinition.mapping.name [ fhir:value "SNOMED CT Attribute Binding" ] - ]; - fhir:StructureDefinition.kind [ fhir:value "resource"]; - fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; - fhir:StructureDefinition.type [ fhir:value "Observation"]; + ]; # + fhir:StructureDefinition.kind [ fhir:value "resource"]; # + fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; # + fhir:StructureDefinition.type [ fhir:value "Observation"]; # fhir:StructureDefinition.baseDefinition [ fhir:value "http://hl7.org/fhir/StructureDefinition/Observation"; fhir:link <http://hl7.org/fhir/StructureDefinition/Observation> - ]; - fhir:StructureDefinition.derivation [ fhir:value "constraint"]; + ]; # + fhir:StructureDefinition.derivation [ fhir:value "constraint"]; # fhir:StructureDefinition.snapshot [ fhir:StructureDefinition.snapshot.element [ fhir:index 0; @@ -3114,7 +3114,7 @@ fhir:ElementDefinition.mapping.map [ fhir:value "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" ] ] ] - ]; + ]; # fhir:StructureDefinition.differential [ fhir:StructureDefinition.differential.element [ fhir:index 0; @@ -3162,7 +3162,7 @@ fhir:ElementDefinition.path [ fhir:value "Observation.component" ]; fhir:ElementDefinition.min [ fhir:value "1"^^xsd:nonNegativeInteger ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/StructureDefinition-study-summary.xlsx b/StructureDefinition-study-summary.xlsx index da22e09a..2155a2af 100644 Binary files a/StructureDefinition-study-summary.xlsx and b/StructureDefinition-study-summary.xlsx differ diff --git a/StructureDefinition-study-summary.xml b/StructureDefinition-study-summary.xml index 8cc2fdf5..ab22a32e 100644 --- a/StructureDefinition-study-summary.xml +++ b/StructureDefinition-study-summary.xml @@ -25,7 +25,7 @@ <name value="StudySummary"/> <title value="Study Summary"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/StructureDefinition-study-variable-summary-definitions.html b/StructureDefinition-study-variable-summary-definitions.html index c322e2b4..cb37d2d2 100644 --- a/StructureDefinition-study-variable-summary-definitions.html +++ b/StructureDefinition-study-variable-summary-definitions.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -327,7 +327,8 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 </ul> <a name="tabs-diff"> </a> <div id="tabs-diff"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Observation"> </a><span style="color: grey">1.</span> <b>Observation</b><a href="#diff_Observation" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Observation.code"> </a><span style="color: grey">2.</span> <b>Observation.code</b><a href="#diff_Observation.code" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..?</td></tr> @@ -335,10 +336,10 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..?</td></tr> <tr><td>Pattern Value</td><td><valueCoding xmlns="http://hl7.org/fhir"><br/>  <system value="https://uts.nlm.nih.gov/uts/umls"/><br/>  <code value="C0242482"/><br/>  <display value="Summary Report"/><br/></valueCoding><br/></td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Observation.subject"> </a><span style="color: grey">4.</span> <b>Observation.subject</b><a href="#diff_Observation.subject" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-study-group.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group">StudyGroup</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/location.html" title="http://hl7.org/fhir/StructureDefinition/Location">Location</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-study-group.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group">StudyGroup</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/location.html" title="http://hl7.org/fhir/StructureDefinition/Location">Location</a></span>)</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Observation.focus"> </a><span style="color: grey">5.</span> <b>Observation.focus</b><a href="#diff_Observation.focus" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>*</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-ncpi-research-study.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study">NcpiResearchStudy</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-ncpi-research-study.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study">NcpiResearchStudy</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>)</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Observation.value[x]"> </a><span style="color: grey">6.</span> <b>Observation.value[x]</b><a href="#diff_Observation.value[x]" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>1</span></td></tr> <tr><td>[x] Note</td><td>See <a href="http://hl7.org/fhir/R4/formats.html#choice">Choice of Data Types</a> for further information about how to use [x]</td></tr> @@ -353,7 +354,8 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 </div> <a name="tabs-key"> </a> <div id="tabs-key"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="key_Observation"> </a><span style="color: grey">1.</span> <b>Observation</b><a href="#key_Observation" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><span style='color:DarkGray'><p>Measurements and simple assertions made about a patient, device or other subject.</p> </span></td></tr> @@ -431,7 +433,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 <tr><td>Definition</td><td><span style='color:DarkGray'><p>The patient, or group of patients, location, or device this observation is about and into whose record the observation is placed. If the actual focus of the observation is different from the subject (or a sample of, part, or region of the subject), the <code>focus</code> element or the <code>code</code> itself specifies the actual focus of the observation.</p> </span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td><span style='color:DarkGray'>0</span>..<span style='color:DarkGray'>1</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-study-group.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group">StudyGroup</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/location.html" title="http://hl7.org/fhir/StructureDefinition/Location">Location</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-study-group.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group">StudyGroup</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/group.html" title="http://hl7.org/fhir/StructureDefinition/Group">Group</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a></span>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/location.html" title="http://hl7.org/fhir/StructureDefinition/Location">Location</a></span>)</td></tr> <tr><td>Requirements</td><td><span style='color:DarkGray'><p>Observations have no value if you don't know who or what they're about.</p> </span></td></tr> <tr><td>Comments</td><td><span style='color:DarkGray'><p>One would expect this element to be a cardinality of 1..1. The only circumstance in which the subject can be missing is when the observation is made by a device that does not know the patient. In this case, the observation SHALL be matched to a patient through some context/channel matching technique, and at this point, the observation should be updated.</p> @@ -442,7 +444,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 <tr><td>Definition</td><td><span style='color:DarkGray'><p>The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.</p> </span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1<span style='color:DarkGray;text-decoration:line-through'>0</span>..<span style='color:DarkGray'>*</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-ncpi-research-study.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study">NcpiResearchStudy</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="StructureDefinition-ncpi-research-study.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study">NcpiResearchStudy</a>|<span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a></span>)</td></tr> <tr><td>Comments</td><td><span style='color:DarkGray'><p>Typically, an observation is made about the subject - a patient, or group of patients, location, or device - and the distinction between the subject and what is directly measured for an observation is specified in the observation code itself ( e.g., "Blood Glucose") and does not need to be represented separately using this element. Use <code>specimen</code> if a reference to a specimen is required. If a code is required instead of a resource use either <code>bodysite</code> for bodysites or the standard extension <a href="http://hl7.org/fhir/R4/extension-observation-focuscode.html">focusCode</a>.</p> </span></td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -516,12 +518,13 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 </div> <a name="tabs-snap"> </a> <div id="tabs-snap"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Observation"> </a><span style="color: grey">1.</span> <b>Observation</b><a href="#Observation" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>Measurements and simple assertions made about a patient, device or other subject.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Vital SignsMeasurementResultsTests</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Vital Signs, Measurement, Results, Tests</td></tr> <tr><td>Comments</td><td><p>Used for simple observations such as device measurements, laboratory atomic results, vital signs, height, weight, smoking status, comments, etc. Other resources are used to provide context for observations such as laboratory reports, etc.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Observation.id"> </a><span style="color: grey">2.</span> <b>Observation.id</b><a href="#Observation.id" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -565,7 +568,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/datatypes.html#Narrative">Narrative</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrativehtmlxhtmldisplay</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>narrative, html, xhtml, display</td></tr> <tr><td>Comments</td><td><p>Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a "text blob" or where text is additionally entered raw or narrated and encoded information is added later.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -575,7 +578,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/resource.html">Resource</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resourcesanonymous resourcescontained resources</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>inline resources, anonymous resources, contained resources</td></tr> <tr><td>Comments</td><td><p>This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.</p> </td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Observation.extension"> </a><span style="color: grey">8.</span> <b>Observation.extension</b><a href="#Observation.extension" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> @@ -583,7 +586,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -597,7 +600,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -616,7 +619,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 <tr><td>Definition</td><td><p>A plan, proposal or order that is fulfilled in whole or in part by this event. For example, a MedicationRequest may require a patient to have laboratory test performed before it is dispensed.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/careplan.html" title="http://hl7.org/fhir/StructureDefinition/CarePlan">CarePlan</a><a href="http://hl7.org/fhir/R4/devicerequest.html" title="http://hl7.org/fhir/StructureDefinition/DeviceRequest">DeviceRequest</a><a href="http://hl7.org/fhir/R4/immunizationrecommendation.html" title="http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation">ImmunizationRecommendation</a><a href="http://hl7.org/fhir/R4/medicationrequest.html" title="http://hl7.org/fhir/StructureDefinition/MedicationRequest">MedicationRequest</a><a href="http://hl7.org/fhir/R4/nutritionorder.html" title="http://hl7.org/fhir/StructureDefinition/NutritionOrder">NutritionOrder</a><a href="http://hl7.org/fhir/R4/servicerequest.html" title="http://hl7.org/fhir/StructureDefinition/ServiceRequest">ServiceRequest</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/careplan.html" title="http://hl7.org/fhir/StructureDefinition/CarePlan">CarePlan</a>|<a href="http://hl7.org/fhir/R4/devicerequest.html" title="http://hl7.org/fhir/StructureDefinition/DeviceRequest">DeviceRequest</a>|<a href="http://hl7.org/fhir/R4/immunizationrecommendation.html" title="http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation">ImmunizationRecommendation</a>|<a href="http://hl7.org/fhir/R4/medicationrequest.html" title="http://hl7.org/fhir/StructureDefinition/MedicationRequest">MedicationRequest</a>|<a href="http://hl7.org/fhir/R4/nutritionorder.html" title="http://hl7.org/fhir/StructureDefinition/NutritionOrder">NutritionOrder</a>|<a href="http://hl7.org/fhir/R4/servicerequest.html" title="http://hl7.org/fhir/StructureDefinition/ServiceRequest">ServiceRequest</a>)</td></tr> <tr><td>Requirements</td><td><p>Allows tracing of authorization for the event and tracking whether proposals/recommendations were acted upon.</p> </td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Fulfills</td></tr> @@ -626,7 +629,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 <tr><td>Definition</td><td><p>A larger event of which this particular Observation is a component or step. For example, an observation as part of a procedure.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/medicationadministration.html" title="http://hl7.org/fhir/StructureDefinition/MedicationAdministration">MedicationAdministration</a><a href="http://hl7.org/fhir/R4/medicationdispense.html" title="http://hl7.org/fhir/StructureDefinition/MedicationDispense">MedicationDispense</a><a href="http://hl7.org/fhir/R4/medicationstatement.html" title="http://hl7.org/fhir/StructureDefinition/MedicationStatement">MedicationStatement</a><a href="http://hl7.org/fhir/R4/procedure.html" title="http://hl7.org/fhir/StructureDefinition/Procedure">Procedure</a><a href="http://hl7.org/fhir/R4/immunization.html" title="http://hl7.org/fhir/StructureDefinition/Immunization">Immunization</a><a href="http://hl7.org/fhir/R4/imagingstudy.html" title="http://hl7.org/fhir/StructureDefinition/ImagingStudy">ImagingStudy</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/medicationadministration.html" title="http://hl7.org/fhir/StructureDefinition/MedicationAdministration">MedicationAdministration</a>|<a href="http://hl7.org/fhir/R4/medicationdispense.html" title="http://hl7.org/fhir/StructureDefinition/MedicationDispense">MedicationDispense</a>|<a href="http://hl7.org/fhir/R4/medicationstatement.html" title="http://hl7.org/fhir/StructureDefinition/MedicationStatement">MedicationStatement</a>|<a href="http://hl7.org/fhir/R4/procedure.html" title="http://hl7.org/fhir/StructureDefinition/Procedure">Procedure</a>|<a href="http://hl7.org/fhir/R4/immunization.html" title="http://hl7.org/fhir/StructureDefinition/Immunization">Immunization</a>|<a href="http://hl7.org/fhir/R4/imagingstudy.html" title="http://hl7.org/fhir/StructureDefinition/ImagingStudy">ImagingStudy</a>)</td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Container</td></tr> <tr><td>Comments</td><td><p>To link an Observation to an Encounter use <code>encounter</code>. See the <a href="http://hl7.org/fhir/R4/observation.html#obsgrouping">Notes</a> below for guidance on referencing another Observation.</p> </td></tr> @@ -687,7 +690,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -720,7 +723,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 <tr><td>Definition</td><td><p>The patient, or group of patients, location, or device this observation is about and into whose record the observation is placed. If the actual focus of the observation is different from the subject (or a sample of, part, or region of the subject), the <code>focus</code> element or the <code>code</code> itself specifies the actual focus of the observation.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="StructureDefinition-study-group.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group">StudyGroup</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="StructureDefinition-study-group.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group">StudyGroup</a>)</td></tr> <tr><td>Requirements</td><td><p>Observations have no value if you don't know who or what they're about.</p> </td></tr> <tr><td>Comments</td><td><p>One would expect this element to be a cardinality of 1..1. The only circumstance in which the subject can be missing is when the observation is made by a device that does not know the patient. In this case, the observation SHALL be matched to a patient through some context/channel matching technique, and at this point, the observation should be updated.</p> @@ -731,7 +734,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 <tr><td>Definition</td><td><p>The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>1..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="StructureDefinition-ncpi-research-study.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study">NcpiResearchStudy</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="StructureDefinition-ncpi-research-study.html" title="https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study">NcpiResearchStudy</a>)</td></tr> <tr><td>Comments</td><td><p>Typically, an observation is made about the subject - a patient, or group of patients, location, or device - and the distinction between the subject and what is directly measured for an observation is specified in the observation code itself ( e.g., "Blood Glucose") and does not need to be represented separately using this element. Use <code>specimen</code> if a reference to a specimen is required. If a code is required instead of a resource use either <code>bodysite</code> for bodysites or the standard extension <a href="http://hl7.org/fhir/R4/extension-observation-focuscode.html">focusCode</a>.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -740,7 +743,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 <tr><td>Definition</td><td><p>The healthcare event (e.g. a patient and healthcare provider interaction) during which this observation is made.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html" title="http://hl7.org/fhir/StructureDefinition/Encounter">Encounter</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/encounter.html" title="http://hl7.org/fhir/StructureDefinition/Encounter">Encounter</a>)</td></tr> <tr><td>Requirements</td><td><p>For some observations it may be important to know the link between an observation and a particular encounter.</p> </td></tr> <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>Context</td></tr> @@ -774,7 +777,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 <tr><td>Definition</td><td><p>Who was responsible for asserting the observed value as "true".</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a><a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a><a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a><a href="http://hl7.org/fhir/R4/careteam.html" title="http://hl7.org/fhir/StructureDefinition/CareTeam">CareTeam</a><a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a><a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/practitioner.html" title="http://hl7.org/fhir/StructureDefinition/Practitioner">Practitioner</a>|<a href="http://hl7.org/fhir/R4/practitionerrole.html" title="http://hl7.org/fhir/StructureDefinition/PractitionerRole">PractitionerRole</a>|<a href="http://hl7.org/fhir/R4/organization.html" title="http://hl7.org/fhir/StructureDefinition/Organization">Organization</a>|<a href="http://hl7.org/fhir/R4/careteam.html" title="http://hl7.org/fhir/StructureDefinition/CareTeam">CareTeam</a>|<a href="http://hl7.org/fhir/R4/patient.html" title="http://hl7.org/fhir/StructureDefinition/Patient">Patient</a>|<a href="http://hl7.org/fhir/R4/relatedperson.html" title="http://hl7.org/fhir/StructureDefinition/RelatedPerson">RelatedPerson</a>)</td></tr> <tr><td>Requirements</td><td><p>May give a degree of confidence in the observation and also indicates where follow-up questions should be directed.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -877,7 +880,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 <tr><td>Definition</td><td><p>The specimen that was used when this observation was made.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/specimen.html" title="http://hl7.org/fhir/StructureDefinition/Specimen">Specimen</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/specimen.html" title="http://hl7.org/fhir/StructureDefinition/Specimen">Specimen</a>)</td></tr> <tr><td>Comments</td><td><p>Should only be used if not implicit in code found in <code>Observation.code</code>. Observations are not made on specimens themselves; they are made on a subject, but in many cases by the means of a specimen. Note that although specimens are often involved, they are not always tracked and reported explicitly. Also note that observation resources may be used in contexts that track the specimen explicitly (e.g. Diagnostic Report).</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -886,7 +889,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 <tr><td>Definition</td><td><p>The device used to generate the observation data.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a><a href="http://hl7.org/fhir/R4/devicemetric.html" title="http://hl7.org/fhir/StructureDefinition/DeviceMetric">DeviceMetric</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/device.html" title="http://hl7.org/fhir/StructureDefinition/Device">Device</a>|<a href="http://hl7.org/fhir/R4/devicemetric.html" title="http://hl7.org/fhir/StructureDefinition/DeviceMetric">DeviceMetric</a>)</td></tr> <tr><td>Comments</td><td><p>Note that this is not meant to represent a device involved in the transmission of the result, e.g., a gateway. Such devices may be documented using the Provenance resource where relevant.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -913,7 +916,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -927,7 +930,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -994,7 +997,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 <tr><td>Definition</td><td><p>This observation is a group observation (e.g. a battery, a panel of tests, a set of vital sign measurements) that includes the target as a member of the group.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a><a href="http://hl7.org/fhir/R4/questionnaireresponse.html" title="http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse">QuestionnaireResponse</a><a href="http://hl7.org/fhir/R4/molecularsequence.html" title="http://hl7.org/fhir/StructureDefinition/MolecularSequence">MolecularSequence</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a>|<a href="http://hl7.org/fhir/R4/questionnaireresponse.html" title="http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse">QuestionnaireResponse</a>|<a href="http://hl7.org/fhir/R4/molecularsequence.html" title="http://hl7.org/fhir/StructureDefinition/MolecularSequence">MolecularSequence</a>)</td></tr> <tr><td>Comments</td><td><p>When using this element, an observation will typically have either a value or a set of related resources, although both may be present in some cases. For a discussion on the ways Observations can assembled in groups together, see <a href="http://hl7.org/fhir/R4/observation.html#obsgrouping">Notes</a> below. Note that a system may calculate results from <a href="http://hl7.org/fhir/R4/questionnaireresponse.html">QuestionnaireResponse</a> into a final score and represent the score as an Observation.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -1003,7 +1006,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 <tr><td>Definition</td><td><p>The target resource that represents a measurement from which this observation value is derived. For example, a calculated anion gap or a fetal measurement based on an ultrasound image.</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/documentreference.html" title="http://hl7.org/fhir/StructureDefinition/DocumentReference">DocumentReference</a><a href="http://hl7.org/fhir/R4/imagingstudy.html" title="http://hl7.org/fhir/StructureDefinition/ImagingStudy">ImagingStudy</a><a href="http://hl7.org/fhir/R4/media.html" title="http://hl7.org/fhir/StructureDefinition/Media">Media</a><a href="http://hl7.org/fhir/R4/questionnaireresponse.html" title="http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse">QuestionnaireResponse</a><a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a><a href="http://hl7.org/fhir/R4/molecularsequence.html" title="http://hl7.org/fhir/StructureDefinition/MolecularSequence">MolecularSequence</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/documentreference.html" title="http://hl7.org/fhir/StructureDefinition/DocumentReference">DocumentReference</a>|<a href="http://hl7.org/fhir/R4/imagingstudy.html" title="http://hl7.org/fhir/StructureDefinition/ImagingStudy">ImagingStudy</a>|<a href="http://hl7.org/fhir/R4/media.html" title="http://hl7.org/fhir/StructureDefinition/Media">Media</a>|<a href="http://hl7.org/fhir/R4/questionnaireresponse.html" title="http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse">QuestionnaireResponse</a>|<a href="http://hl7.org/fhir/R4/observation.html" title="http://hl7.org/fhir/StructureDefinition/Observation">Observation</a>|<a href="http://hl7.org/fhir/R4/molecularsequence.html" title="http://hl7.org/fhir/StructureDefinition/MolecularSequence">MolecularSequence</a>)</td></tr> <tr><td>Comments</td><td><p>All the reference choices that are listed in this element can represent clinical observations and other measurements that may be the source for a derived value. The most common reference will be another Observation. For a discussion on the ways Observations can assembled in groups together, see <a href="http://hl7.org/fhir/R4/observation.html#obsgrouping">Notes</a> below.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -1030,7 +1033,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..*</td></tr> <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/extensibility.html#Extension">Extension</a></td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser content</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -1044,7 +1047,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#ismodifier">Is Modifier</a></td><td>true</td></tr> <tr><td>Requirements</td><td><p>Modifier extensions allow for extensions that <em>cannot</em> be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the <a href="http://hl7.org/fhir/R4/extensibility.html#modifierExtension">definition of modifier extensions</a>.</p> </td></tr> - <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensionsuser contentmodifiers</td></tr> + <tr><td title="Other names by which this resource/element may be known">Alternate Names</td><td>extensions, user content, modifiers</td></tr> <tr><td>Comments</td><td><p>There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.</p> </td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> @@ -1172,7 +1175,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Detailed Descriptions</h2 <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-variable-summary-examples.html b/StructureDefinition-study-variable-summary-examples.html index d8bea440..dec2e736 100644 --- a/StructureDefinition-study-variable-summary-examples.html +++ b/StructureDefinition-study-variable-summary-examples.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Examples</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -378,7 +378,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Examples</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-variable-summary-mappings.html b/StructureDefinition-study-variable-summary-mappings.html index 5657c685..c14eb873 100644 --- a/StructureDefinition-study-variable-summary-mappings.html +++ b/StructureDefinition-study-variable-summary-mappings.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Mappings</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -522,7 +522,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Mappings</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-variable-summary-testing.html b/StructureDefinition-study-variable-summary-testing.html index 8c4cbfdb..f8175a9c 100644 --- a/StructureDefinition-study-variable-summary-testing.html +++ b/StructureDefinition-study-variable-summary-testing.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -297,7 +297,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Testing</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -362,7 +362,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Testing</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-variable-summary.html b/StructureDefinition-study-variable-summary.html index 96a50002..68064fb1 100644 --- a/StructureDefinition-study-variable-summary.html +++ b/StructureDefinition-study-variable-summary.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -321,7 +321,7 @@ <h2 id="root">Resource Profile: Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -1209,7 +1209,7 @@ <h3>Notes:</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-variable-summary.json b/StructureDefinition-study-variable-summary.json index 21aba58a..873db02a 100644 --- a/StructureDefinition-study-variable-summary.json +++ b/StructureDefinition-study-variable-summary.json @@ -1,3010 +1,2556 @@ -{ - "resourceType": "StructureDefinition", - "id": "study-variable-summary", - "text": { - "status": "extensions", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation\">Observation</a><a name=\"Observation\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observation.html\">Observation</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Measurements and simple assertions</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.code\">code</a><a name=\"Observation.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck101.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.code.coding\">coding</a><a name=\"Observation.code.coding\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Code defined by a terminology system</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">https://uts.nlm.nih.gov/uts/umls</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">C0242482</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">Summary Report</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.subject\">subject</a><a name=\"Observation.subject\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Who and/or what the observation is about</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.focus\">focus</a><a name=\"Observation.focus\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-ncpi-research-study.html\">NCPI Research Study</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">What the observation is about, when it is not about the subject of record</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck12.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_slice.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Slice Definition\" class=\"hierarchy\"/> <a style=\"font-style: italic\" href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.value[x]\">value[x]</a><a name=\"Observation.value_x_\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"font-style: italic\"/><span style=\"font-style: italic\">1</span><span style=\"font-style: italic\">..</span><span style=\"opacity: 0.5; font-style: italic\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5; font-style: italic\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5; font-style: italic\">Actual result</span><br style=\"font-style: italic\"/><span style=\"font-weight:bold; font-style: italic\">Slice: </span><span style=\"font-style: italic\">Unordered, Open by type:$this</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_datatype.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Data Type\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.valueCodeableConcept\">valueCodeableConcept</a><a name=\"Observation.valueCodeableConcept\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Actual result</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.component\">component</a><a name=\"Observation.component\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#BackboneElement\">BackboneElement</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Component results</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - }, - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", - "valueString": "Clinical.Diagnostics" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", - "valueCode": "patient" - } - ], - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-variable-summary", - "version": "0.2.0", - "name": "StudyVariableSummary", - "title": "Study Variable Summary", - "status": "draft", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "An observation containing summary data associated with research data from FHIR.", - "fhirVersion": "4.0.1", - "mapping": [ - { - "identity": "workflow", - "uri": "http://hl7.org/fhir/workflow", - "name": "Workflow Pattern" - }, - { - "identity": "sct-concept", - "uri": "http://snomed.info/conceptdomain", - "name": "SNOMED CT Concept Domain Binding" - }, - { - "identity": "v2", - "uri": "http://hl7.org/v2", - "name": "HL7 v2 Mapping" - }, - { - "identity": "rim", - "uri": "http://hl7.org/v3", - "name": "RIM Mapping" - }, - { - "identity": "w5", - "uri": "http://hl7.org/fhir/fivews", - "name": "FiveWs Pattern Mapping" - }, - { - "identity": "sct-attr", - "uri": "http://snomed.org/attributebinding", - "name": "SNOMED CT Attribute Binding" - } - ], - "kind": "resource", - "abstract": false, - "type": "Observation", - "baseDefinition": "http://hl7.org/fhir/StructureDefinition/Observation", - "derivation": "constraint", - "snapshot": { - "element": [ - { - "id": "Observation", - "path": "Observation", - "short": "Measurements and simple assertions", - "definition": "Measurements and simple assertions made about a patient, device or other subject.", - "comment": "Used for simple observations such as device measurements, laboratory atomic results, vital signs, height, weight, smoking status, comments, etc. Other resources are used to provide context for observations such as laboratory reports, etc.", - "alias": [ - "Vital Signs", - "Measurement", - "Results", - "Tests" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation", - "min": 0, - "max": "*" - }, - "constraint": [ - { - "key": "dom-2", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL NOT contain nested Resources", - "expression": "contained.contained.empty()", - "xpath": "not(parent::f:contained and f:contained)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-3", - "severity": "error", - "human": "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", - "expression": "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", - "xpath": "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-4", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", - "expression": "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "dom-5", - "severity": "error", - "human": "If a resource is contained in another resource, it SHALL NOT have a security label", - "expression": "contained.meta.security.empty()", - "xpath": "not(exists(f:contained/*/f:meta/f:security))", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", - "valueBoolean": true - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", - "valueMarkdown": "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." - } - ], - "key": "dom-6", - "severity": "warning", - "human": "A resource should have narrative for robust management", - "expression": "text.`div`.exists()", - "xpath": "exists(f:text/h:div)", - "source": "http://hl7.org/fhir/StructureDefinition/DomainResource" - }, - { - "key": "obs-6", - "severity": "error", - "human": "dataAbsentReason SHALL only be present if Observation.value[x] is not present", - "expression": "dataAbsentReason.empty() or value.empty()", - "xpath": "not(exists(f:dataAbsentReason)) or (not(exists(*[starts-with(local-name(.), 'value')])))", - "source": "http://hl7.org/fhir/StructureDefinition/Observation" - }, - { - "key": "obs-7", - "severity": "error", - "human": "If Observation.code is the same as an Observation.component.code then the value element associated with the code SHALL NOT be present", - "expression": "value.empty() or component.code.where(coding.intersect(%resource.code.coding).exists()).empty()", - "xpath": "not(f:*[starts-with(local-name(.), 'value')] and (for $coding in f:code/f:coding return f:component/f:code/f:coding[f:code/@value=$coding/f:code/@value] [f:system/@value=$coding/f:system/@value]))", - "source": "http://hl7.org/fhir/StructureDefinition/Observation" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Entity. Role, or Act" - }, - { - "identity": "workflow", - "map": "Event" - }, - { - "identity": "sct-concept", - "map": "< 363787002 |Observable entity|" - }, - { - "identity": "v2", - "map": "OBX" - }, - { - "identity": "rim", - "map": "Observation[classCode=OBS, moodCode=EVN]" - } - ] - }, - { - "id": "Observation.id", - "path": "Observation.id", - "short": "Logical id of this artifact", - "definition": "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", - "comment": "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "id" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "Observation.meta", - "path": "Observation.meta", - "short": "Metadata about the resource", - "definition": "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.meta", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Meta" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true - }, - { - "id": "Observation.implicitRules", - "path": "Observation.implicitRules", - "short": "A set of rules under which this content was created", - "definition": "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", - "comment": "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", - "min": 0, - "max": "1", - "base": { - "path": "Resource.implicitRules", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "uri" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", - "isSummary": true - }, - { - "id": "Observation.language", - "path": "Observation.language", - "short": "Language of the resource content", - "definition": "The base language in which the resource is written.", - "comment": "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", - "min": 0, - "max": "1", - "base": { - "path": "Resource.language", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", - "valueCanonical": "http://hl7.org/fhir/ValueSet/all-languages" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "Language" - }, - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", - "valueBoolean": true - } - ], - "strength": "preferred", - "description": "A human language.", - "valueSet": "http://hl7.org/fhir/ValueSet/languages" - } - }, - { - "id": "Observation.text", - "path": "Observation.text", - "short": "Text summary of the resource, for human interpretation", - "definition": "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", - "comment": "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", - "alias": [ - "narrative", - "html", - "xhtml", - "display" - ], - "min": 0, - "max": "1", - "base": { - "path": "DomainResource.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Narrative" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "Act.text?" - } - ] - }, - { - "id": "Observation.contained", - "path": "Observation.contained", - "short": "Contained, inline Resources", - "definition": "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", - "comment": "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", - "alias": [ - "inline resources", - "anonymous resources", - "contained resources" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.contained", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Resource" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.extension", - "path": "Observation.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.modifierExtension", - "path": "Observation.modifierExtension", - "short": "Extensions that cannot be ignored", - "definition": "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "DomainResource.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.identifier", - "path": "Observation.identifier", - "short": "Business Identifier for observation", - "definition": "A unique identifier assigned to this observation.", - "requirements": "Allows observations to be distinguished and referenced.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.identifier", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Identifier" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.identifier" - }, - { - "identity": "w5", - "map": "FiveWs.identifier" - }, - { - "identity": "v2", - "map": "OBX.21 For OBX segments from systems without OBX-21 support a combination of ORC/OBR and OBX must be negotiated between trading partners to uniquely identify the OBX segment. Depending on how V2 has been implemented each of these may be an option: 1) OBR-3 + OBX-3 + OBX-4 or 2) OBR-3 + OBR-4 + OBX-3 + OBX-4 or 2) some other way to uniquely ID the OBR/ORC + OBX-3 + OBX-4." - }, - { - "identity": "rim", - "map": "id" - } - ] - }, - { - "id": "Observation.basedOn", - "path": "Observation.basedOn", - "short": "Fulfills plan, proposal or order", - "definition": "A plan, proposal or order that is fulfilled in whole or in part by this event. For example, a MedicationRequest may require a patient to have laboratory test performed before it is dispensed.", - "requirements": "Allows tracing of authorization for the event and tracking whether proposals/recommendations were acted upon.", - "alias": [ - "Fulfills" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation.basedOn", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/CarePlan", - "http://hl7.org/fhir/StructureDefinition/DeviceRequest", - "http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation", - "http://hl7.org/fhir/StructureDefinition/MedicationRequest", - "http://hl7.org/fhir/StructureDefinition/NutritionOrder", - "http://hl7.org/fhir/StructureDefinition/ServiceRequest" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.basedOn" - }, - { - "identity": "v2", - "map": "ORC" - }, - { - "identity": "rim", - "map": ".inboundRelationship[typeCode=COMP].source[moodCode=EVN]" - } - ] - }, - { - "id": "Observation.partOf", - "path": "Observation.partOf", - "short": "Part of referenced event", - "definition": "A larger event of which this particular Observation is a component or step. For example, an observation as part of a procedure.", - "comment": "To link an Observation to an Encounter use `encounter`. See the [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below for guidance on referencing another Observation.", - "alias": [ - "Container" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation.partOf", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/MedicationAdministration", - "http://hl7.org/fhir/StructureDefinition/MedicationDispense", - "http://hl7.org/fhir/StructureDefinition/MedicationStatement", - "http://hl7.org/fhir/StructureDefinition/Procedure", - "http://hl7.org/fhir/StructureDefinition/Immunization", - "http://hl7.org/fhir/StructureDefinition/ImagingStudy" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.partOf" - }, - { - "identity": "v2", - "map": "Varies by domain" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=FLFS].target" - } - ] - }, - { - "id": "Observation.status", - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-display-hint", - "valueString": "default: final" - } - ], - "path": "Observation.status", - "short": "registered | preliminary | final | amended +", - "definition": "The status of the result value.", - "comment": "This element is labeled as a modifier because the status contains codes that mark the resource as not currently valid.", - "requirements": "Need to track the status of individual results. Some results are finalized before the whole report is finalized.", - "min": 1, - "max": "1", - "base": { - "path": "Observation.status", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "code" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": true, - "isModifierReason": "This element is labeled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid", - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationStatus" - } - ], - "strength": "required", - "description": "Codes providing the status of an observation.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-status|4.0.1" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.status" - }, - { - "identity": "w5", - "map": "FiveWs.status" - }, - { - "identity": "sct-concept", - "map": "< 445584004 |Report by finality status|" - }, - { - "identity": "v2", - "map": "OBX-11" - }, - { - "identity": "rim", - "map": "status Amended & Final are differentiated by whether it is the subject of a ControlAct event with a type of \"revise\"" - } - ] - }, - { - "id": "Observation.category", - "path": "Observation.category", - "short": "Classification of type of observation", - "definition": "A code that classifies the general type of observation being made.", - "comment": "In addition to the required category valueset, this element allows various categorization schemes based on the owner’s definition of the category and effectively multiple categories can be used at once. The level of granularity is defined by the category concepts in the value set.", - "requirements": "Used for filtering what observations are retrieved and displayed.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.category", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationCategory" - } - ], - "strength": "preferred", - "description": "Codes for high level observation categories.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-category" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.class" - }, - { - "identity": "rim", - "map": ".outboundRelationship[typeCode=\"COMP].target[classCode=\"LIST\", moodCode=\"EVN\"].code" - } - ] - }, - { - "id": "Observation.code", - "path": "Observation.code", - "short": "Type of observation (code / type)", - "definition": "Describes what was observed. Sometimes this is called the observation \"name\".", - "comment": "*All* code-value and, if present, component.code-component.value pairs need to be taken into account to correctly understand the meaning of the observation.", - "requirements": "Knowing what kind of observation is being made is essential to understanding the observation.", - "alias": [ - "Name" - ], - "min": 1, - "max": "1", - "base": { - "path": "Observation.code", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationCode" - } - ], - "strength": "example", - "description": "Codes identifying names of simple observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-codes" - }, - "mapping": [ - { - "identity": "workflow", - "map": "Event.code" - }, - { - "identity": "w5", - "map": "FiveWs.what[x]" - }, - { - "identity": "sct-concept", - "map": "< 363787002 |Observable entity| OR < 386053000 |Evaluation procedure|" - }, - { - "identity": "v2", - "map": "OBX-3" - }, - { - "identity": "rim", - "map": "code" - }, - { - "identity": "sct-attr", - "map": "116680003 |Is a|" - } - ] - }, - { - "id": "Observation.code.id", - "path": "Observation.code.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.code.extension", - "path": "Observation.code.extension", - "slicing": { - "discriminator": [ - { - "type": "value", - "path": "url" - } - ], - "description": "Extensions are always sliced by (at least) url", - "rules": "open" - }, - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.code.coding", - "path": "Observation.code.coding", - "short": "Code defined by a terminology system", - "definition": "A reference to a code defined by a terminology system.", - "comment": "Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.", - "requirements": "Allows for alternative encodings within a code system, and translations to other code systems.", - "min": 0, - "max": "*", - "base": { - "path": "CodeableConcept.coding", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Coding" - } - ], - "patternCoding": { - "system": "https://uts.nlm.nih.gov/uts/umls", - "code": "C0242482", - "display": "Summary Report" - }, - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "C*E.1-8, C*E.10-22" - }, - { - "identity": "rim", - "map": "union(., ./translation)" - }, - { - "identity": "orim", - "map": "fhir:CodeableConcept.coding rdfs:subPropertyOf dt:CD.coding" - } - ] - }, - { - "id": "Observation.code.text", - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable", - "valueBoolean": true - } - ], - "path": "Observation.code.text", - "short": "Plain text representation of the concept", - "definition": "A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user.", - "comment": "Very often the text is the same as a displayName of one of the codings.", - "requirements": "The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source.", - "min": 0, - "max": "1", - "base": { - "path": "CodeableConcept.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "C*E.9. But note many systems use C*E.2 for this" - }, - { - "identity": "rim", - "map": "./originalText[mediaType/code=\"text/plain\"]/data" - }, - { - "identity": "orim", - "map": "fhir:CodeableConcept.text rdfs:subPropertyOf dt:CD.originalText" - } - ] - }, - { - "id": "Observation.subject", - "path": "Observation.subject", - "short": "Who and/or what the observation is about", - "definition": "The patient, or group of patients, location, or device this observation is about and into whose record the observation is placed. If the actual focus of the observation is different from the subject (or a sample of, part, or region of the subject), the `focus` element or the `code` itself specifies the actual focus of the observation.", - "comment": "One would expect this element to be a cardinality of 1..1. The only circumstance in which the subject can be missing is when the observation is made by a device that does not know the patient. In this case, the observation SHALL be matched to a patient through some context/channel matching technique, and at this point, the observation should be updated.", - "requirements": "Observations have no value if you don't know who or what they're about.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.subject", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.subject" - }, - { - "identity": "w5", - "map": "FiveWs.subject[x]" - }, - { - "identity": "v2", - "map": "PID-3" - }, - { - "identity": "rim", - "map": "participation[typeCode=RTGT]" - }, - { - "identity": "w5", - "map": "FiveWs.subject" - } - ] - }, - { - "id": "Observation.focus", - "path": "Observation.focus", - "short": "What the observation is about, when it is not about the subject of record", - "definition": "The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.", - "comment": "Typically, an observation is made about the subject - a patient, or group of patients, location, or device - and the distinction between the subject and what is directly measured for an observation is specified in the observation code itself ( e.g., \"Blood Glucose\") and does not need to be represented separately using this element. Use `specimen` if a reference to a specimen is required. If a code is required instead of a resource use either `bodysite` for bodysites or the standard extension [focusCode](http://hl7.org/fhir/R4/extension-observation-focuscode.html).", - "min": 1, - "max": "*", - "base": { - "path": "Observation.focus", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.subject[x]" - }, - { - "identity": "v2", - "map": "OBX-3" - }, - { - "identity": "rim", - "map": "participation[typeCode=SBJ]" - }, - { - "identity": "w5", - "map": "FiveWs.subject" - } - ] - }, - { - "id": "Observation.encounter", - "path": "Observation.encounter", - "short": "Healthcare event during which this observation is made", - "definition": "The healthcare event (e.g. a patient and healthcare provider interaction) during which this observation is made.", - "comment": "This will typically be the encounter the event occurred within, but some events may be initiated prior to or after the official completion of an encounter but still be tied to the context of the encounter (e.g. pre-admission laboratory tests).", - "requirements": "For some observations it may be important to know the link between an observation and a particular encounter.", - "alias": [ - "Context" - ], - "min": 0, - "max": "1", - "base": { - "path": "Observation.encounter", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Encounter" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.context" - }, - { - "identity": "w5", - "map": "FiveWs.context" - }, - { - "identity": "v2", - "map": "PV1" - }, - { - "identity": "rim", - "map": "inboundRelationship[typeCode=COMP].source[classCode=ENC, moodCode=EVN]" - } - ] - }, - { - "id": "Observation.effective[x]", - "path": "Observation.effective[x]", - "short": "Clinically relevant time/time-period for observation", - "definition": "The time or time-period the observed value is asserted as being true. For biological subjects - e.g. human patients - this is usually called the \"physiologically relevant time\". This is usually either the time of the procedure or of specimen collection, but very often the source of the date/time is not known, only the date/time itself.", - "comment": "At least a date should be present unless this observation is a historical report. For recording imprecise or \"fuzzy\" times (For example, a blood glucose measurement taken \"after breakfast\") use the [Timing](http://hl7.org/fhir/R4/datatypes.html#timing) datatype which allow the measurement to be tied to regular life events.", - "requirements": "Knowing when an observation was deemed true is important to its relevance as well as determining trends.", - "alias": [ - "Occurrence" - ], - "min": 0, - "max": "1", - "base": { - "path": "Observation.effective[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "dateTime" - }, - { - "code": "Period" - }, - { - "code": "Timing" - }, - { - "code": "instant" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.occurrence[x]" - }, - { - "identity": "w5", - "map": "FiveWs.done[x]" - }, - { - "identity": "v2", - "map": "OBX-14, and/or OBX-19 after v2.4 (depends on who observation made)" - }, - { - "identity": "rim", - "map": "effectiveTime" - } - ] - }, - { - "id": "Observation.issued", - "path": "Observation.issued", - "short": "Date/Time this version was made available", - "definition": "The date and time this version of the observation was made available to providers, typically after the results have been reviewed and verified.", - "comment": "For Observations that don’t require review and verification, it may be the same as the [`lastUpdated` ](http://hl7.org/fhir/R4/resource-definitions.html#Meta.lastUpdated) time of the resource itself. For Observations that do require review and verification for certain updates, it might not be the same as the `lastUpdated` time of the resource itself due to a non-clinically significant update that doesn’t require the new version to be reviewed and verified again.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.issued", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "instant" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.recorded" - }, - { - "identity": "v2", - "map": "OBR.22 (or MSH.7), or perhaps OBX-19 (depends on who observation made)" - }, - { - "identity": "rim", - "map": "participation[typeCode=AUT].time" - } - ] - }, - { - "id": "Observation.performer", - "path": "Observation.performer", - "short": "Who is responsible for the observation", - "definition": "Who was responsible for asserting the observed value as \"true\".", - "requirements": "May give a degree of confidence in the observation and also indicates where follow-up questions should be directed.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.performer", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Practitioner", - "http://hl7.org/fhir/StructureDefinition/PractitionerRole", - "http://hl7.org/fhir/StructureDefinition/Organization", - "http://hl7.org/fhir/StructureDefinition/CareTeam", - "http://hl7.org/fhir/StructureDefinition/Patient", - "http://hl7.org/fhir/StructureDefinition/RelatedPerson" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "workflow", - "map": "Event.performer.actor" - }, - { - "identity": "w5", - "map": "FiveWs.actor" - }, - { - "identity": "v2", - "map": "OBX.15 / (Practitioner) OBX-16, PRT-5:PRT-4='RO' / (Device) OBX-18 , PRT-10:PRT-4='EQUIP' / (Organization) OBX-23, PRT-8:PRT-4='PO'" - }, - { - "identity": "rim", - "map": "participation[typeCode=PRF]" - } - ] - }, - { - "id": "Observation.value[x]", - "path": "Observation.value[x]", - "slicing": { - "discriminator": [ - { - "type": "type", - "path": "$this" - } - ], - "ordered": false, - "rules": "closed" - }, - "short": "Actual result", - "definition": "The information determined as a result of making the observation, if the information has a simple value.", - "comment": "An observation may have; 1) a single value here, 2) both a value and a set of related or component values, or 3) only a set of related or component values. If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", - "requirements": "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", - "min": 1, - "max": "1", - "base": { - "path": "Observation.value[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "obs-7" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 441742003 |Evaluation finding|" - }, - { - "identity": "v2", - "map": "OBX.2, OBX.5, OBX.6" - }, - { - "identity": "rim", - "map": "value" - }, - { - "identity": "sct-attr", - "map": "363714003 |Interprets|" - } - ] - }, - { - "id": "Observation.value[x]:valueCodeableConcept", - "path": "Observation.value[x]", - "sliceName": "valueCodeableConcept", - "short": "Actual result", - "definition": "The information determined as a result of making the observation, if the information has a simple value.", - "comment": "An observation may have; 1) a single value here, 2) both a value and a set of related or component values, or 3) only a set of related or component values. If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", - "requirements": "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", - "min": 1, - "max": "1", - "base": { - "path": "Observation.value[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "obs-7" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 441742003 |Evaluation finding|" - }, - { - "identity": "v2", - "map": "OBX.2, OBX.5, OBX.6" - }, - { - "identity": "rim", - "map": "value" - }, - { - "identity": "sct-attr", - "map": "363714003 |Interprets|" - } - ] - }, - { - "id": "Observation.dataAbsentReason", - "path": "Observation.dataAbsentReason", - "short": "Why the result is missing", - "definition": "Provides a reason why the expected value in the element Observation.value[x] is missing.", - "comment": "Null or exceptional values can be represented two ways in FHIR Observations. One way is to simply include them in the value set and represent the exceptions in the value. For example, measurement values for a serology test could be \"detected\", \"not detected\", \"inconclusive\", or \"specimen unsatisfactory\". \n\nThe alternate way is to use the value element for actual observations and use the explicit dataAbsentReason element to record exceptional values. For example, the dataAbsentReason code \"error\" could be used when the measurement was not completed. Note that an observation may only be reported if there are values to report. For example differential cell counts values may be reported only when > 0. Because of these options, use-case agreements are required to interpret general observations for null or exceptional values.", - "requirements": "For many results it is necessary to handle exceptional values in measurements.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.dataAbsentReason", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "obs-6" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationValueAbsentReason" - } - ], - "strength": "extensible", - "description": "Codes specifying why the result (`Observation.value[x]`) is missing.", - "valueSet": "http://hl7.org/fhir/ValueSet/data-absent-reason" - }, - "mapping": [ - { - "identity": "v2", - "map": "N/A" - }, - { - "identity": "rim", - "map": "value.nullFlavor" - } - ] - }, - { - "id": "Observation.interpretation", - "path": "Observation.interpretation", - "short": "High, low, normal, etc.", - "definition": "A categorical assessment of an observation value. For example, high, low, normal.", - "comment": "Historically used for laboratory results (known as 'abnormal flag' ), its use extends to other use cases where coded interpretations are relevant. Often reported as one or more simple compact codes this element is often placed adjacent to the result value in reports and flow sheets to signal the meaning/normalcy status of the result.", - "requirements": "For some results, particularly numeric results, an interpretation is necessary to fully understand the significance of a result.", - "alias": [ - "Abnormal Flag" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation.interpretation", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationInterpretation" - } - ], - "strength": "extensible", - "description": "Codes identifying interpretations of observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-interpretation" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 260245000 |Findings values|" - }, - { - "identity": "v2", - "map": "OBX-8" - }, - { - "identity": "rim", - "map": "interpretationCode" - }, - { - "identity": "sct-attr", - "map": "363713009 |Has interpretation|" - } - ] - }, - { - "id": "Observation.note", - "path": "Observation.note", - "short": "Comments about the observation", - "definition": "Comments about the observation or the results.", - "comment": "May include general statements about the observation, or statements about significant, unexpected or unreliable results values, or information about its source when relevant to its interpretation.", - "requirements": "Need to be able to provide free text additional information.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.note", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Annotation" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "NTE.3 (partner NTE to OBX, or sometimes another (child?) OBX)" - }, - { - "identity": "rim", - "map": "subjectOf.observationEvent[code=\"annotation\"].value" - } - ] - }, - { - "id": "Observation.bodySite", - "path": "Observation.bodySite", - "short": "Observed body part", - "definition": "Indicates the site on the subject's body where the observation was made (i.e. the target site).", - "comment": "Only used if not implicit in code found in Observation.code. In many systems, this may be represented as a related observation instead of an inline component. \n\nIf the use case requires BodySite to be handled as a separate resource (e.g. to identify and track separately) then use the standard extension[ bodySite](http://hl7.org/fhir/R4/extension-bodysite.html).", - "min": 0, - "max": "1", - "base": { - "path": "Observation.bodySite", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "BodySite" - } - ], - "strength": "example", - "description": "Codes describing anatomical locations. May include laterality.", - "valueSet": "http://hl7.org/fhir/ValueSet/body-site" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 123037004 |Body structure|" - }, - { - "identity": "v2", - "map": "OBX-20" - }, - { - "identity": "rim", - "map": "targetSiteCode" - }, - { - "identity": "sct-attr", - "map": "718497002 |Inherent location|" - } - ] - }, - { - "id": "Observation.method", - "path": "Observation.method", - "short": "How it was done", - "definition": "Indicates the mechanism used to perform the observation.", - "comment": "Only used if not implicit in code for Observation.code.", - "requirements": "In some cases, method can impact results and is thus used for determining whether results can be compared or determining significance of results.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.method", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationMethod" - } - ], - "strength": "example", - "description": "Methods for simple observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-methods" - }, - "mapping": [ - { - "identity": "v2", - "map": "OBX-17" - }, - { - "identity": "rim", - "map": "methodCode" - } - ] - }, - { - "id": "Observation.specimen", - "path": "Observation.specimen", - "short": "Specimen used for this observation", - "definition": "The specimen that was used when this observation was made.", - "comment": "Should only be used if not implicit in code found in `Observation.code`. Observations are not made on specimens themselves; they are made on a subject, but in many cases by the means of a specimen. Note that although specimens are often involved, they are not always tracked and reported explicitly. Also note that observation resources may be used in contexts that track the specimen explicitly (e.g. Diagnostic Report).", - "min": 0, - "max": "1", - "base": { - "path": "Observation.specimen", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Specimen" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 123038009 |Specimen|" - }, - { - "identity": "v2", - "map": "SPM segment" - }, - { - "identity": "rim", - "map": "participation[typeCode=SPC].specimen" - }, - { - "identity": "sct-attr", - "map": "704319004 |Inherent in|" - } - ] - }, - { - "id": "Observation.device", - "path": "Observation.device", - "short": "(Measurement) Device", - "definition": "The device used to generate the observation data.", - "comment": "Note that this is not meant to represent a device involved in the transmission of the result, e.g., a gateway. Such devices may be documented using the Provenance resource where relevant.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.device", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Device", - "http://hl7.org/fhir/StructureDefinition/DeviceMetric" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 49062001 |Device|" - }, - { - "identity": "v2", - "map": "OBX-17 / PRT -10" - }, - { - "identity": "rim", - "map": "participation[typeCode=DEV]" - }, - { - "identity": "sct-attr", - "map": "424226004 |Using device|" - } - ] - }, - { - "id": "Observation.referenceRange", - "path": "Observation.referenceRange", - "short": "Provides guide for interpretation", - "definition": "Guidance on how to interpret the value by comparison to a normal or recommended range. Multiple reference ranges are interpreted as an \"OR\". In other words, to represent two distinct target populations, two `referenceRange` elements would be used.", - "comment": "Most observations only have one generic reference range. Systems MAY choose to restrict to only supplying the relevant reference range based on knowledge about the patient (e.g., specific to the patient's age, gender, weight and other factors), but this might not be possible or appropriate. Whenever more than one reference range is supplied, the differences between them SHOULD be provided in the reference range and/or age properties.", - "requirements": "Knowing what values are considered \"normal\" can help evaluate the significance of a particular result. Need to be able to provide multiple reference ranges for different contexts.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.referenceRange", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "obs-3", - "severity": "error", - "human": "Must have at least a low or a high or text", - "expression": "low.exists() or high.exists() or text.exists()", - "xpath": "(exists(f:low) or exists(f:high)or exists(f:text))", - "source": "http://hl7.org/fhir/StructureDefinition/Observation" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX.7" - }, - { - "identity": "rim", - "map": "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" - } - ] - }, - { - "id": "Observation.referenceRange.id", - "path": "Observation.referenceRange.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.referenceRange.extension", - "path": "Observation.referenceRange.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.referenceRange.modifierExtension", - "path": "Observation.referenceRange.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.referenceRange.low", - "path": "Observation.referenceRange.low", - "short": "Low Range, if relevant", - "definition": "The value of the low bound of the reference range. The low bound of the reference range endpoint is inclusive of the value (e.g. reference range is >=5 - <=9). If the low bound is omitted, it is assumed to be meaningless (e.g. reference range is <=2.3).", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.low", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Quantity", - "profile": [ - "http://hl7.org/fhir/StructureDefinition/SimpleQuantity" - ] - } - ], - "condition": [ - "obs-3" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX-7" - }, - { - "identity": "rim", - "map": "value:IVL_PQ.low" - } - ] - }, - { - "id": "Observation.referenceRange.high", - "path": "Observation.referenceRange.high", - "short": "High Range, if relevant", - "definition": "The value of the high bound of the reference range. The high bound of the reference range endpoint is inclusive of the value (e.g. reference range is >=5 - <=9). If the high bound is omitted, it is assumed to be meaningless (e.g. reference range is >= 2.3).", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.high", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Quantity", - "profile": [ - "http://hl7.org/fhir/StructureDefinition/SimpleQuantity" - ] - } - ], - "condition": [ - "obs-3" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX-7" - }, - { - "identity": "rim", - "map": "value:IVL_PQ.high" - } - ] - }, - { - "id": "Observation.referenceRange.type", - "path": "Observation.referenceRange.type", - "short": "Reference range qualifier", - "definition": "Codes to indicate the what part of the targeted reference population it applies to. For example, the normal or therapeutic range.", - "comment": "This SHOULD be populated if there is more than one range. If this element is not present then the normal range is assumed.", - "requirements": "Need to be able to say what kind of reference range this is - normal, recommended, therapeutic, etc., - for proper interpretation.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.type", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationRangeMeaning" - } - ], - "strength": "preferred", - "description": "Code for the meaning of a reference range.", - "valueSet": "http://hl7.org/fhir/ValueSet/referencerange-meaning" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 260245000 |Findings values| OR \r< 365860008 |General clinical state finding| \rOR \r< 250171008 |Clinical history or observation findings| OR \r< 415229000 |Racial group| OR \r< 365400002 |Finding of puberty stage| OR\r< 443938003 |Procedure carried out on subject|" - }, - { - "identity": "v2", - "map": "OBX-10" - }, - { - "identity": "rim", - "map": "interpretationCode" - } - ] - }, - { - "id": "Observation.referenceRange.appliesTo", - "path": "Observation.referenceRange.appliesTo", - "short": "Reference range population", - "definition": "Codes to indicate the target population this reference range applies to. For example, a reference range may be based on the normal population or a particular sex or race. Multiple `appliesTo` are interpreted as an \"AND\" of the target populations. For example, to represent a target population of African American females, both a code of female and a code for African American would be used.", - "comment": "This SHOULD be populated if there is more than one range. If this element is not present then the normal population is assumed.", - "requirements": "Need to be able to identify the target population for proper interpretation.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.referenceRange.appliesTo", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationRangeType" - } - ], - "strength": "example", - "description": "Codes identifying the population the reference range applies to.", - "valueSet": "http://hl7.org/fhir/ValueSet/referencerange-appliesto" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 260245000 |Findings values| OR \r< 365860008 |General clinical state finding| \rOR \r< 250171008 |Clinical history or observation findings| OR \r< 415229000 |Racial group| OR \r< 365400002 |Finding of puberty stage| OR\r< 443938003 |Procedure carried out on subject|" - }, - { - "identity": "v2", - "map": "OBX-10" - }, - { - "identity": "rim", - "map": "interpretationCode" - } - ] - }, - { - "id": "Observation.referenceRange.age", - "path": "Observation.referenceRange.age", - "short": "Applicable age range, if relevant", - "definition": "The age at which this reference range is applicable. This is a neonatal age (e.g. number of weeks at term) if the meaning says so.", - "requirements": "Some analytes vary greatly over age.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.age", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Range" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "outboundRelationship[typeCode=PRCN].targetObservationCriterion[code=\"age\"].value" - } - ] - }, - { - "id": "Observation.referenceRange.text", - "path": "Observation.referenceRange.text", - "short": "Text based reference range in an observation", - "definition": "Text based reference range in an observation which may be used when a quantitative range is not appropriate for an observation. An example would be a reference value of \"Negative\" or a list or table of \"normals\".", - "min": 0, - "max": "1", - "base": { - "path": "Observation.referenceRange.text", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "string" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX-7" - }, - { - "identity": "rim", - "map": "value:ST" - } - ] - }, - { - "id": "Observation.hasMember", - "path": "Observation.hasMember", - "short": "Related resource that belongs to the Observation group", - "definition": "This observation is a group observation (e.g. a battery, a panel of tests, a set of vital sign measurements) that includes the target as a member of the group.", - "comment": "When using this element, an observation will typically have either a value or a set of related resources, although both may be present in some cases. For a discussion on the ways Observations can assembled in groups together, see [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below. Note that a system may calculate results from [QuestionnaireResponse](http://hl7.org/fhir/R4/questionnaireresponse.html) into a final score and represent the score as an Observation.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.hasMember", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Observation", - "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse", - "http://hl7.org/fhir/StructureDefinition/MolecularSequence" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "Relationships established by OBX-4 usage" - }, - { - "identity": "rim", - "map": "outBoundRelationship" - } - ] - }, - { - "id": "Observation.derivedFrom", - "path": "Observation.derivedFrom", - "short": "Related measurements the observation is made from", - "definition": "The target resource that represents a measurement from which this observation value is derived. For example, a calculated anion gap or a fetal measurement based on an ultrasound image.", - "comment": "All the reference choices that are listed in this element can represent clinical observations and other measurements that may be the source for a derived value. The most common reference will be another Observation. For a discussion on the ways Observations can assembled in groups together, see [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.derivedFrom", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/DocumentReference", - "http://hl7.org/fhir/StructureDefinition/ImagingStudy", - "http://hl7.org/fhir/StructureDefinition/Media", - "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse", - "http://hl7.org/fhir/StructureDefinition/Observation", - "http://hl7.org/fhir/StructureDefinition/MolecularSequence" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "Relationships established by OBX-4 usage" - }, - { - "identity": "rim", - "map": ".targetObservation" - } - ] - }, - { - "id": "Observation.component", - "path": "Observation.component", - "short": "Component results", - "definition": "Some observations have multiple component observations. These component observations are expressed as separate code value pairs that share the same attributes. Examples include systolic and diastolic component observations for blood pressure measurement and multiple component observations for genetics observations.", - "comment": "For a discussion on the ways Observations can be assembled in groups together see [Notes](http://hl7.org/fhir/R4/observation.html#notes) below.", - "requirements": "Component observations share the same attributes in the Observation resource as the primary observation and are always treated a part of a single observation (they are not separable). However, the reference range for the primary observation value is not inherited by the component values and is required when appropriate for each component observation.", - "min": 1, - "max": "*", - "base": { - "path": "Observation.component", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "BackboneElement" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "v2", - "map": "containment by OBX-4?" - }, - { - "identity": "rim", - "map": "outBoundRelationship[typeCode=COMP]" - } - ] - }, - { - "id": "Observation.component.id", - "path": "Observation.component.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.component.extension", - "path": "Observation.component.extension", - "short": "Additional content defined by implementations", - "definition": "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "alias": [ - "extensions", - "user content" - ], - "min": 0, - "max": "*", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Observation.component.modifierExtension", - "path": "Observation.component.modifierExtension", - "short": "Extensions that cannot be ignored even if unrecognized", - "definition": "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", - "comment": "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", - "requirements": "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", - "alias": [ - "extensions", - "user content", - "modifiers" - ], - "min": 0, - "max": "*", - "base": { - "path": "BackboneElement.modifierExtension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": true, - "isModifierReason": "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", - "isSummary": true, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Observation.component.code", - "path": "Observation.component.code", - "short": "Type of component observation (code / type)", - "definition": "Describes what was observed. Sometimes this is called the observation \"code\".", - "comment": "*All* code-value and component.code-component.value pairs need to be taken into account to correctly understand the meaning of the observation.", - "requirements": "Knowing what kind of observation is being made is essential to understanding the observation.", - "min": 1, - "max": "1", - "base": { - "path": "Observation.component.code", - "min": 1, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationCode" - } - ], - "strength": "example", - "description": "Codes identifying names of simple observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-codes" - }, - "mapping": [ - { - "identity": "w5", - "map": "FiveWs.what[x]" - }, - { - "identity": "sct-concept", - "map": "< 363787002 |Observable entity| OR \r< 386053000 |Evaluation procedure|" - }, - { - "identity": "v2", - "map": "OBX-3" - }, - { - "identity": "rim", - "map": "code" - } - ] - }, - { - "id": "Observation.component.value[x]", - "path": "Observation.component.value[x]", - "short": "Actual component result", - "definition": "The information determined as a result of making the observation, if the information has a simple value.", - "comment": "Used when observation has a set of component observations. An observation may have both a value (e.g. an Apgar score) and component observations (the observations from which the Apgar score was derived). If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", - "requirements": "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.component.value[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Quantity" - }, - { - "code": "CodeableConcept" - }, - { - "code": "string" - }, - { - "code": "boolean" - }, - { - "code": "integer" - }, - { - "code": "Range" - }, - { - "code": "Ratio" - }, - { - "code": "SampledData" - }, - { - "code": "time" - }, - { - "code": "dateTime" - }, - { - "code": "Period" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": true, - "mapping": [ - { - "identity": "sct-concept", - "map": "363714003 |Interprets| < 441742003 |Evaluation finding|" - }, - { - "identity": "v2", - "map": "OBX.2, OBX.5, OBX.6" - }, - { - "identity": "rim", - "map": "value" - }, - { - "identity": "sct-attr", - "map": "363714003 |Interprets|" - } - ] - }, - { - "id": "Observation.component.dataAbsentReason", - "path": "Observation.component.dataAbsentReason", - "short": "Why the component result is missing", - "definition": "Provides a reason why the expected value in the element Observation.component.value[x] is missing.", - "comment": "\"Null\" or exceptional values can be represented two ways in FHIR Observations. One way is to simply include them in the value set and represent the exceptions in the value. For example, measurement values for a serology test could be \"detected\", \"not detected\", \"inconclusive\", or \"test not done\". \n\nThe alternate way is to use the value element for actual observations and use the explicit dataAbsentReason element to record exceptional values. For example, the dataAbsentReason code \"error\" could be used when the measurement was not completed. Because of these options, use-case agreements are required to interpret general observations for exceptional values.", - "requirements": "For many results it is necessary to handle exceptional values in measurements.", - "min": 0, - "max": "1", - "base": { - "path": "Observation.component.dataAbsentReason", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "condition": [ - "obs-6" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationValueAbsentReason" - } - ], - "strength": "extensible", - "description": "Codes specifying why the result (`Observation.value[x]`) is missing.", - "valueSet": "http://hl7.org/fhir/ValueSet/data-absent-reason" - }, - "mapping": [ - { - "identity": "v2", - "map": "N/A" - }, - { - "identity": "rim", - "map": "value.nullFlavor" - } - ] - }, - { - "id": "Observation.component.interpretation", - "path": "Observation.component.interpretation", - "short": "High, low, normal, etc.", - "definition": "A categorical assessment of an observation value. For example, high, low, normal.", - "comment": "Historically used for laboratory results (known as 'abnormal flag' ), its use extends to other use cases where coded interpretations are relevant. Often reported as one or more simple compact codes this element is often placed adjacent to the result value in reports and flow sheets to signal the meaning/normalcy status of the result.", - "requirements": "For some results, particularly numeric results, an interpretation is necessary to fully understand the significance of a result.", - "alias": [ - "Abnormal Flag" - ], - "min": 0, - "max": "*", - "base": { - "path": "Observation.component.interpretation", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "CodeableConcept" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "binding": { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", - "valueString": "ObservationInterpretation" - } - ], - "strength": "extensible", - "description": "Codes identifying interpretations of observations.", - "valueSet": "http://hl7.org/fhir/ValueSet/observation-interpretation" - }, - "mapping": [ - { - "identity": "sct-concept", - "map": "< 260245000 |Findings values|" - }, - { - "identity": "v2", - "map": "OBX-8" - }, - { - "identity": "rim", - "map": "interpretationCode" - }, - { - "identity": "sct-attr", - "map": "363713009 |Has interpretation|" - } - ] - }, - { - "id": "Observation.component.referenceRange", - "path": "Observation.component.referenceRange", - "short": "Provides guide for interpretation of component result", - "definition": "Guidance on how to interpret the value by comparison to a normal or recommended range.", - "comment": "Most observations only have one generic reference range. Systems MAY choose to restrict to only supplying the relevant reference range based on knowledge about the patient (e.g., specific to the patient's age, gender, weight and other factors), but this might not be possible or appropriate. Whenever more than one reference range is supplied, the differences between them SHOULD be provided in the reference range and/or age properties.", - "requirements": "Knowing what values are considered \"normal\" can help evaluate the significance of a particular result. Need to be able to provide multiple reference ranges for different contexts.", - "min": 0, - "max": "*", - "base": { - "path": "Observation.component.referenceRange", - "min": 0, - "max": "*" - }, - "contentReference": "http://hl7.org/fhir/StructureDefinition/Observation#Observation.referenceRange", - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "v2", - "map": "OBX.7" - }, - { - "identity": "rim", - "map": "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" - } - ] - } - ] - }, - "differential": { - "element": [ - { - "id": "Observation", - "path": "Observation" - }, - { - "id": "Observation.code.coding", - "path": "Observation.code.coding", - "patternCoding": { - "system": "https://uts.nlm.nih.gov/uts/umls", - "code": "C0242482", - "display": "Summary Report" - } - }, - { - "id": "Observation.subject", - "path": "Observation.subject", - "type": [ - { - "code": "Reference", - "targetProfile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group" - ] - } - ] - }, - { - "id": "Observation.focus", - "path": "Observation.focus", - "min": 1, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study" - ] - } - ] - }, - { - "id": "Observation.value[x]", - "path": "Observation.value[x]", - "slicing": { - "discriminator": [ - { - "type": "type", - "path": "$this" - } - ], - "ordered": false, - "rules": "open" - }, - "min": 1 - }, - { - "id": "Observation.valueCodeableConcept", - "path": "Observation.valueCodeableConcept", - "min": 1, - "max": "1", - "type": [ - { - "code": "CodeableConcept" - } - ] - }, - { - "id": "Observation.component", - "path": "Observation.component", - "min": 1 - } - ] - } +{ + "resourceType" : "StructureDefinition", + "id" : "study-variable-summary", + "text" : { + "status" : "extensions", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation\">Observation</a><a name=\"Observation\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observation.html\">Observation</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Measurements and simple assertions</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.code\">code</a><a name=\"Observation.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck101.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.code.coding\">coding</a><a name=\"Observation.code.coding\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Code defined by a terminology system</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">https://uts.nlm.nih.gov/uts/umls</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">C0242482</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">Summary Report</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.subject\">subject</a><a name=\"Observation.subject\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Who and/or what the observation is about</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.focus\">focus</a><a name=\"Observation.focus\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-ncpi-research-study.html\">NCPI Research Study</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">What the observation is about, when it is not about the subject of record</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck12.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_slice.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Slice Definition\" class=\"hierarchy\"/> <a style=\"font-style: italic\" href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.value[x]\">value[x]</a><a name=\"Observation.value_x_\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"font-style: italic\"/><span style=\"font-style: italic\">1</span><span style=\"font-style: italic\">..</span><span style=\"opacity: 0.5; font-style: italic\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5; font-style: italic\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5; font-style: italic\">Actual result</span><br style=\"font-style: italic\"/><span style=\"font-weight:bold; font-style: italic\">Slice: </span><span style=\"font-style: italic\">Unordered, Open by type:$this</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_datatype.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Data Type\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.valueCodeableConcept\">valueCodeableConcept</a><a name=\"Observation.valueCodeableConcept\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Actual result</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.component\">component</a><a name=\"Observation.component\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#BackboneElement\">BackboneElement</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Component results</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" + }, + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-category", + "valueString" : "Clinical.Diagnostics" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category", + "valueCode" : "patient" + }], + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-variable-summary", + "version" : "0.2.0", + "name" : "StudyVariableSummary", + "title" : "Study Variable Summary", + "status" : "draft", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "An observation containing summary data associated with research data from FHIR.", + "fhirVersion" : "4.0.1", + "mapping" : [{ + "identity" : "workflow", + "uri" : "http://hl7.org/fhir/workflow", + "name" : "Workflow Pattern" + }, + { + "identity" : "sct-concept", + "uri" : "http://snomed.info/conceptdomain", + "name" : "SNOMED CT Concept Domain Binding" + }, + { + "identity" : "v2", + "uri" : "http://hl7.org/v2", + "name" : "HL7 v2 Mapping" + }, + { + "identity" : "rim", + "uri" : "http://hl7.org/v3", + "name" : "RIM Mapping" + }, + { + "identity" : "w5", + "uri" : "http://hl7.org/fhir/fivews", + "name" : "FiveWs Pattern Mapping" + }, + { + "identity" : "sct-attr", + "uri" : "http://snomed.org/attributebinding", + "name" : "SNOMED CT Attribute Binding" + }], + "kind" : "resource", + "abstract" : false, + "type" : "Observation", + "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/Observation", + "derivation" : "constraint", + "snapshot" : { + "element" : [{ + "id" : "Observation", + "path" : "Observation", + "short" : "Measurements and simple assertions", + "definition" : "Measurements and simple assertions made about a patient, device or other subject.", + "comment" : "Used for simple observations such as device measurements, laboratory atomic results, vital signs, height, weight, smoking status, comments, etc. Other resources are used to provide context for observations such as laboratory reports, etc.", + "alias" : ["Vital Signs", + "Measurement", + "Results", + "Tests"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation", + "min" : 0, + "max" : "*" + }, + "constraint" : [{ + "key" : "dom-2", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL NOT contain nested Resources", + "expression" : "contained.contained.empty()", + "xpath" : "not(parent::f:contained and f:contained)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-3", + "severity" : "error", + "human" : "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource", + "expression" : "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()", + "xpath" : "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-4", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated", + "expression" : "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "dom-5", + "severity" : "error", + "human" : "If a resource is contained in another resource, it SHALL NOT have a security label", + "expression" : "contained.meta.security.empty()", + "xpath" : "not(exists(f:contained/*/f:meta/f:security))", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice", + "valueBoolean" : true + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation", + "valueMarkdown" : "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time." + }], + "key" : "dom-6", + "severity" : "warning", + "human" : "A resource should have narrative for robust management", + "expression" : "text.`div`.exists()", + "xpath" : "exists(f:text/h:div)", + "source" : "http://hl7.org/fhir/StructureDefinition/DomainResource" + }, + { + "key" : "obs-6", + "severity" : "error", + "human" : "dataAbsentReason SHALL only be present if Observation.value[x] is not present", + "expression" : "dataAbsentReason.empty() or value.empty()", + "xpath" : "not(exists(f:dataAbsentReason)) or (not(exists(*[starts-with(local-name(.), 'value')])))", + "source" : "http://hl7.org/fhir/StructureDefinition/Observation" + }, + { + "key" : "obs-7", + "severity" : "error", + "human" : "If Observation.code is the same as an Observation.component.code then the value element associated with the code SHALL NOT be present", + "expression" : "value.empty() or component.code.where(coding.intersect(%resource.code.coding).exists()).empty()", + "xpath" : "not(f:*[starts-with(local-name(.), 'value')] and (for $coding in f:code/f:coding return f:component/f:code/f:coding[f:code/@value=$coding/f:code/@value] [f:system/@value=$coding/f:system/@value]))", + "source" : "http://hl7.org/fhir/StructureDefinition/Observation" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Entity. Role, or Act" + }, + { + "identity" : "workflow", + "map" : "Event" + }, + { + "identity" : "sct-concept", + "map" : "< 363787002 |Observable entity|" + }, + { + "identity" : "v2", + "map" : "OBX" + }, + { + "identity" : "rim", + "map" : "Observation[classCode=OBS, moodCode=EVN]" + }] + }, + { + "id" : "Observation.id", + "path" : "Observation.id", + "short" : "Logical id of this artifact", + "definition" : "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.", + "comment" : "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "id" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "Observation.meta", + "path" : "Observation.meta", + "short" : "Metadata about the resource", + "definition" : "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.meta", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Meta" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true + }, + { + "id" : "Observation.implicitRules", + "path" : "Observation.implicitRules", + "short" : "A set of rules under which this content was created", + "definition" : "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.", + "comment" : "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.implicitRules", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "uri" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation", + "isSummary" : true + }, + { + "id" : "Observation.language", + "path" : "Observation.language", + "short" : "Language of the resource content", + "definition" : "The base language in which the resource is written.", + "comment" : "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Resource.language", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet", + "valueCanonical" : "http://hl7.org/fhir/ValueSet/all-languages" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "Language" + }, + { + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding", + "valueBoolean" : true + }], + "strength" : "preferred", + "description" : "A human language.", + "valueSet" : "http://hl7.org/fhir/ValueSet/languages" + } + }, + { + "id" : "Observation.text", + "path" : "Observation.text", + "short" : "Text summary of the resource, for human interpretation", + "definition" : "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.", + "comment" : "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.", + "alias" : ["narrative", + "html", + "xhtml", + "display"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "DomainResource.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Narrative" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "Act.text?" + }] + }, + { + "id" : "Observation.contained", + "path" : "Observation.contained", + "short" : "Contained, inline Resources", + "definition" : "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.", + "comment" : "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.", + "alias" : ["inline resources", + "anonymous resources", + "contained resources"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.contained", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Resource" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.extension", + "path" : "Observation.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.modifierExtension", + "path" : "Observation.modifierExtension", + "short" : "Extensions that cannot be ignored", + "definition" : "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "DomainResource.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them", + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.identifier", + "path" : "Observation.identifier", + "short" : "Business Identifier for observation", + "definition" : "A unique identifier assigned to this observation.", + "requirements" : "Allows observations to be distinguished and referenced.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.identifier", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Identifier" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.identifier" + }, + { + "identity" : "w5", + "map" : "FiveWs.identifier" + }, + { + "identity" : "v2", + "map" : "OBX.21 For OBX segments from systems without OBX-21 support a combination of ORC/OBR and OBX must be negotiated between trading partners to uniquely identify the OBX segment. Depending on how V2 has been implemented each of these may be an option: 1) OBR-3 + OBX-3 + OBX-4 or 2) OBR-3 + OBR-4 + OBX-3 + OBX-4 or 2) some other way to uniquely ID the OBR/ORC + OBX-3 + OBX-4." + }, + { + "identity" : "rim", + "map" : "id" + }] + }, + { + "id" : "Observation.basedOn", + "path" : "Observation.basedOn", + "short" : "Fulfills plan, proposal or order", + "definition" : "A plan, proposal or order that is fulfilled in whole or in part by this event. For example, a MedicationRequest may require a patient to have laboratory test performed before it is dispensed.", + "requirements" : "Allows tracing of authorization for the event and tracking whether proposals/recommendations were acted upon.", + "alias" : ["Fulfills"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.basedOn", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/CarePlan", + "http://hl7.org/fhir/StructureDefinition/DeviceRequest", + "http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation", + "http://hl7.org/fhir/StructureDefinition/MedicationRequest", + "http://hl7.org/fhir/StructureDefinition/NutritionOrder", + "http://hl7.org/fhir/StructureDefinition/ServiceRequest"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.basedOn" + }, + { + "identity" : "v2", + "map" : "ORC" + }, + { + "identity" : "rim", + "map" : ".inboundRelationship[typeCode=COMP].source[moodCode=EVN]" + }] + }, + { + "id" : "Observation.partOf", + "path" : "Observation.partOf", + "short" : "Part of referenced event", + "definition" : "A larger event of which this particular Observation is a component or step. For example, an observation as part of a procedure.", + "comment" : "To link an Observation to an Encounter use `encounter`. See the [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below for guidance on referencing another Observation.", + "alias" : ["Container"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.partOf", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/MedicationAdministration", + "http://hl7.org/fhir/StructureDefinition/MedicationDispense", + "http://hl7.org/fhir/StructureDefinition/MedicationStatement", + "http://hl7.org/fhir/StructureDefinition/Procedure", + "http://hl7.org/fhir/StructureDefinition/Immunization", + "http://hl7.org/fhir/StructureDefinition/ImagingStudy"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.partOf" + }, + { + "identity" : "v2", + "map" : "Varies by domain" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=FLFS].target" + }] + }, + { + "id" : "Observation.status", + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-display-hint", + "valueString" : "default: final" + }], + "path" : "Observation.status", + "short" : "registered | preliminary | final | amended +", + "definition" : "The status of the result value.", + "comment" : "This element is labeled as a modifier because the status contains codes that mark the resource as not currently valid.", + "requirements" : "Need to track the status of individual results. Some results are finalized before the whole report is finalized.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Observation.status", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "code" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : true, + "isModifierReason" : "This element is labeled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid", + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationStatus" + }], + "strength" : "required", + "description" : "Codes providing the status of an observation.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-status|4.0.1" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.status" + }, + { + "identity" : "w5", + "map" : "FiveWs.status" + }, + { + "identity" : "sct-concept", + "map" : "< 445584004 |Report by finality status|" + }, + { + "identity" : "v2", + "map" : "OBX-11" + }, + { + "identity" : "rim", + "map" : "status Amended & Final are differentiated by whether it is the subject of a ControlAct event with a type of \"revise\"" + }] + }, + { + "id" : "Observation.category", + "path" : "Observation.category", + "short" : "Classification of type of observation", + "definition" : "A code that classifies the general type of observation being made.", + "comment" : "In addition to the required category valueset, this element allows various categorization schemes based on the owner’s definition of the category and effectively multiple categories can be used at once. The level of granularity is defined by the category concepts in the value set.", + "requirements" : "Used for filtering what observations are retrieved and displayed.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.category", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationCategory" + }], + "strength" : "preferred", + "description" : "Codes for high level observation categories.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-category" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.class" + }, + { + "identity" : "rim", + "map" : ".outboundRelationship[typeCode=\"COMP].target[classCode=\"LIST\", moodCode=\"EVN\"].code" + }] + }, + { + "id" : "Observation.code", + "path" : "Observation.code", + "short" : "Type of observation (code / type)", + "definition" : "Describes what was observed. Sometimes this is called the observation \"name\".", + "comment" : "*All* code-value and, if present, component.code-component.value pairs need to be taken into account to correctly understand the meaning of the observation.", + "requirements" : "Knowing what kind of observation is being made is essential to understanding the observation.", + "alias" : ["Name"], + "min" : 1, + "max" : "1", + "base" : { + "path" : "Observation.code", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationCode" + }], + "strength" : "example", + "description" : "Codes identifying names of simple observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-codes" + }, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.code" + }, + { + "identity" : "w5", + "map" : "FiveWs.what[x]" + }, + { + "identity" : "sct-concept", + "map" : "< 363787002 |Observable entity| OR < 386053000 |Evaluation procedure|" + }, + { + "identity" : "v2", + "map" : "OBX-3" + }, + { + "identity" : "rim", + "map" : "code" + }, + { + "identity" : "sct-attr", + "map" : "116680003 |Is a|" + }] + }, + { + "id" : "Observation.code.id", + "path" : "Observation.code.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.code.extension", + "path" : "Observation.code.extension", + "slicing" : { + "discriminator" : [{ + "type" : "value", + "path" : "url" + }], + "description" : "Extensions are always sliced by (at least) url", + "rules" : "open" + }, + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.code.coding", + "path" : "Observation.code.coding", + "short" : "Code defined by a terminology system", + "definition" : "A reference to a code defined by a terminology system.", + "comment" : "Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.", + "requirements" : "Allows for alternative encodings within a code system, and translations to other code systems.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "CodeableConcept.coding", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Coding" + }], + "patternCoding" : { + "system" : "https://uts.nlm.nih.gov/uts/umls", + "code" : "C0242482", + "display" : "Summary Report" + }, + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "C*E.1-8, C*E.10-22" + }, + { + "identity" : "rim", + "map" : "union(., ./translation)" + }, + { + "identity" : "orim", + "map" : "fhir:CodeableConcept.coding rdfs:subPropertyOf dt:CD.coding" + }] + }, + { + "id" : "Observation.code.text", + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable", + "valueBoolean" : true + }], + "path" : "Observation.code.text", + "short" : "Plain text representation of the concept", + "definition" : "A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user.", + "comment" : "Very often the text is the same as a displayName of one of the codings.", + "requirements" : "The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "CodeableConcept.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "C*E.9. But note many systems use C*E.2 for this" + }, + { + "identity" : "rim", + "map" : "./originalText[mediaType/code=\"text/plain\"]/data" + }, + { + "identity" : "orim", + "map" : "fhir:CodeableConcept.text rdfs:subPropertyOf dt:CD.originalText" + }] + }, + { + "id" : "Observation.subject", + "path" : "Observation.subject", + "short" : "Who and/or what the observation is about", + "definition" : "The patient, or group of patients, location, or device this observation is about and into whose record the observation is placed. If the actual focus of the observation is different from the subject (or a sample of, part, or region of the subject), the `focus` element or the `code` itself specifies the actual focus of the observation.", + "comment" : "One would expect this element to be a cardinality of 1..1. The only circumstance in which the subject can be missing is when the observation is made by a device that does not know the patient. In this case, the observation SHALL be matched to a patient through some context/channel matching technique, and at this point, the observation should be updated.", + "requirements" : "Observations have no value if you don't know who or what they're about.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.subject", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.subject" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject[x]" + }, + { + "identity" : "v2", + "map" : "PID-3" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=RTGT]" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject" + }] + }, + { + "id" : "Observation.focus", + "path" : "Observation.focus", + "short" : "What the observation is about, when it is not about the subject of record", + "definition" : "The actual focus of an observation when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, fetus, or donor. For example, fetus observations in a mother's record. The focus of an observation could also be an existing condition, an intervention, the subject's diet, another observation of the subject, or a body structure such as tumor or implanted device. An example use case would be using the Observation resource to capture whether the mother is trained to change her child's tracheostomy tube. In this example, the child is the patient of record and the mother is the focus.", + "comment" : "Typically, an observation is made about the subject - a patient, or group of patients, location, or device - and the distinction between the subject and what is directly measured for an observation is specified in the observation code itself ( e.g., \"Blood Glucose\") and does not need to be represented separately using this element. Use `specimen` if a reference to a specimen is required. If a code is required instead of a resource use either `bodysite` for bodysites or the standard extension [focusCode](http://hl7.org/fhir/R4/extension-observation-focuscode.html).", + "min" : 1, + "max" : "*", + "base" : { + "path" : "Observation.focus", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.subject[x]" + }, + { + "identity" : "v2", + "map" : "OBX-3" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=SBJ]" + }, + { + "identity" : "w5", + "map" : "FiveWs.subject" + }] + }, + { + "id" : "Observation.encounter", + "path" : "Observation.encounter", + "short" : "Healthcare event during which this observation is made", + "definition" : "The healthcare event (e.g. a patient and healthcare provider interaction) during which this observation is made.", + "comment" : "This will typically be the encounter the event occurred within, but some events may be initiated prior to or after the official completion of an encounter but still be tied to the context of the encounter (e.g. pre-admission laboratory tests).", + "requirements" : "For some observations it may be important to know the link between an observation and a particular encounter.", + "alias" : ["Context"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.encounter", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Encounter"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.context" + }, + { + "identity" : "w5", + "map" : "FiveWs.context" + }, + { + "identity" : "v2", + "map" : "PV1" + }, + { + "identity" : "rim", + "map" : "inboundRelationship[typeCode=COMP].source[classCode=ENC, moodCode=EVN]" + }] + }, + { + "id" : "Observation.effective[x]", + "path" : "Observation.effective[x]", + "short" : "Clinically relevant time/time-period for observation", + "definition" : "The time or time-period the observed value is asserted as being true. For biological subjects - e.g. human patients - this is usually called the \"physiologically relevant time\". This is usually either the time of the procedure or of specimen collection, but very often the source of the date/time is not known, only the date/time itself.", + "comment" : "At least a date should be present unless this observation is a historical report. For recording imprecise or \"fuzzy\" times (For example, a blood glucose measurement taken \"after breakfast\") use the [Timing](http://hl7.org/fhir/R4/datatypes.html#timing) datatype which allow the measurement to be tied to regular life events.", + "requirements" : "Knowing when an observation was deemed true is important to its relevance as well as determining trends.", + "alias" : ["Occurrence"], + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.effective[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "dateTime" + }, + { + "code" : "Period" + }, + { + "code" : "Timing" + }, + { + "code" : "instant" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.occurrence[x]" + }, + { + "identity" : "w5", + "map" : "FiveWs.done[x]" + }, + { + "identity" : "v2", + "map" : "OBX-14, and/or OBX-19 after v2.4 (depends on who observation made)" + }, + { + "identity" : "rim", + "map" : "effectiveTime" + }] + }, + { + "id" : "Observation.issued", + "path" : "Observation.issued", + "short" : "Date/Time this version was made available", + "definition" : "The date and time this version of the observation was made available to providers, typically after the results have been reviewed and verified.", + "comment" : "For Observations that don’t require review and verification, it may be the same as the [`lastUpdated` ](http://hl7.org/fhir/R4/resource-definitions.html#Meta.lastUpdated) time of the resource itself. For Observations that do require review and verification for certain updates, it might not be the same as the `lastUpdated` time of the resource itself due to a non-clinically significant update that doesn’t require the new version to be reviewed and verified again.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.issued", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "instant" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.recorded" + }, + { + "identity" : "v2", + "map" : "OBR.22 (or MSH.7), or perhaps OBX-19 (depends on who observation made)" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=AUT].time" + }] + }, + { + "id" : "Observation.performer", + "path" : "Observation.performer", + "short" : "Who is responsible for the observation", + "definition" : "Who was responsible for asserting the observed value as \"true\".", + "requirements" : "May give a degree of confidence in the observation and also indicates where follow-up questions should be directed.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.performer", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Practitioner", + "http://hl7.org/fhir/StructureDefinition/PractitionerRole", + "http://hl7.org/fhir/StructureDefinition/Organization", + "http://hl7.org/fhir/StructureDefinition/CareTeam", + "http://hl7.org/fhir/StructureDefinition/Patient", + "http://hl7.org/fhir/StructureDefinition/RelatedPerson"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "workflow", + "map" : "Event.performer.actor" + }, + { + "identity" : "w5", + "map" : "FiveWs.actor" + }, + { + "identity" : "v2", + "map" : "OBX.15 / (Practitioner) OBX-16, PRT-5:PRT-4='RO' / (Device) OBX-18 , PRT-10:PRT-4='EQUIP' / (Organization) OBX-23, PRT-8:PRT-4='PO'" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=PRF]" + }] + }, + { + "id" : "Observation.value[x]", + "path" : "Observation.value[x]", + "slicing" : { + "discriminator" : [{ + "type" : "type", + "path" : "$this" + }], + "ordered" : false, + "rules" : "closed" + }, + "short" : "Actual result", + "definition" : "The information determined as a result of making the observation, if the information has a simple value.", + "comment" : "An observation may have; 1) a single value here, 2) both a value and a set of related or component values, or 3) only a set of related or component values. If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", + "requirements" : "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Observation.value[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["obs-7"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 441742003 |Evaluation finding|" + }, + { + "identity" : "v2", + "map" : "OBX.2, OBX.5, OBX.6" + }, + { + "identity" : "rim", + "map" : "value" + }, + { + "identity" : "sct-attr", + "map" : "363714003 |Interprets|" + }] + }, + { + "id" : "Observation.value[x]:valueCodeableConcept", + "path" : "Observation.value[x]", + "sliceName" : "valueCodeableConcept", + "short" : "Actual result", + "definition" : "The information determined as a result of making the observation, if the information has a simple value.", + "comment" : "An observation may have; 1) a single value here, 2) both a value and a set of related or component values, or 3) only a set of related or component values. If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", + "requirements" : "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Observation.value[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["obs-7"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 441742003 |Evaluation finding|" + }, + { + "identity" : "v2", + "map" : "OBX.2, OBX.5, OBX.6" + }, + { + "identity" : "rim", + "map" : "value" + }, + { + "identity" : "sct-attr", + "map" : "363714003 |Interprets|" + }] + }, + { + "id" : "Observation.dataAbsentReason", + "path" : "Observation.dataAbsentReason", + "short" : "Why the result is missing", + "definition" : "Provides a reason why the expected value in the element Observation.value[x] is missing.", + "comment" : "Null or exceptional values can be represented two ways in FHIR Observations. One way is to simply include them in the value set and represent the exceptions in the value. For example, measurement values for a serology test could be \"detected\", \"not detected\", \"inconclusive\", or \"specimen unsatisfactory\". \n\nThe alternate way is to use the value element for actual observations and use the explicit dataAbsentReason element to record exceptional values. For example, the dataAbsentReason code \"error\" could be used when the measurement was not completed. Note that an observation may only be reported if there are values to report. For example differential cell counts values may be reported only when > 0. Because of these options, use-case agreements are required to interpret general observations for null or exceptional values.", + "requirements" : "For many results it is necessary to handle exceptional values in measurements.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.dataAbsentReason", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["obs-6"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationValueAbsentReason" + }], + "strength" : "extensible", + "description" : "Codes specifying why the result (`Observation.value[x]`) is missing.", + "valueSet" : "http://hl7.org/fhir/ValueSet/data-absent-reason" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "N/A" + }, + { + "identity" : "rim", + "map" : "value.nullFlavor" + }] + }, + { + "id" : "Observation.interpretation", + "path" : "Observation.interpretation", + "short" : "High, low, normal, etc.", + "definition" : "A categorical assessment of an observation value. For example, high, low, normal.", + "comment" : "Historically used for laboratory results (known as 'abnormal flag' ), its use extends to other use cases where coded interpretations are relevant. Often reported as one or more simple compact codes this element is often placed adjacent to the result value in reports and flow sheets to signal the meaning/normalcy status of the result.", + "requirements" : "For some results, particularly numeric results, an interpretation is necessary to fully understand the significance of a result.", + "alias" : ["Abnormal Flag"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.interpretation", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationInterpretation" + }], + "strength" : "extensible", + "description" : "Codes identifying interpretations of observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-interpretation" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 260245000 |Findings values|" + }, + { + "identity" : "v2", + "map" : "OBX-8" + }, + { + "identity" : "rim", + "map" : "interpretationCode" + }, + { + "identity" : "sct-attr", + "map" : "363713009 |Has interpretation|" + }] + }, + { + "id" : "Observation.note", + "path" : "Observation.note", + "short" : "Comments about the observation", + "definition" : "Comments about the observation or the results.", + "comment" : "May include general statements about the observation, or statements about significant, unexpected or unreliable results values, or information about its source when relevant to its interpretation.", + "requirements" : "Need to be able to provide free text additional information.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.note", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Annotation" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "NTE.3 (partner NTE to OBX, or sometimes another (child?) OBX)" + }, + { + "identity" : "rim", + "map" : "subjectOf.observationEvent[code=\"annotation\"].value" + }] + }, + { + "id" : "Observation.bodySite", + "path" : "Observation.bodySite", + "short" : "Observed body part", + "definition" : "Indicates the site on the subject's body where the observation was made (i.e. the target site).", + "comment" : "Only used if not implicit in code found in Observation.code. In many systems, this may be represented as a related observation instead of an inline component. \n\nIf the use case requires BodySite to be handled as a separate resource (e.g. to identify and track separately) then use the standard extension[ bodySite](http://hl7.org/fhir/R4/extension-bodysite.html).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.bodySite", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "BodySite" + }], + "strength" : "example", + "description" : "Codes describing anatomical locations. May include laterality.", + "valueSet" : "http://hl7.org/fhir/ValueSet/body-site" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 123037004 |Body structure|" + }, + { + "identity" : "v2", + "map" : "OBX-20" + }, + { + "identity" : "rim", + "map" : "targetSiteCode" + }, + { + "identity" : "sct-attr", + "map" : "718497002 |Inherent location|" + }] + }, + { + "id" : "Observation.method", + "path" : "Observation.method", + "short" : "How it was done", + "definition" : "Indicates the mechanism used to perform the observation.", + "comment" : "Only used if not implicit in code for Observation.code.", + "requirements" : "In some cases, method can impact results and is thus used for determining whether results can be compared or determining significance of results.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.method", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationMethod" + }], + "strength" : "example", + "description" : "Methods for simple observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-methods" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX-17" + }, + { + "identity" : "rim", + "map" : "methodCode" + }] + }, + { + "id" : "Observation.specimen", + "path" : "Observation.specimen", + "short" : "Specimen used for this observation", + "definition" : "The specimen that was used when this observation was made.", + "comment" : "Should only be used if not implicit in code found in `Observation.code`. Observations are not made on specimens themselves; they are made on a subject, but in many cases by the means of a specimen. Note that although specimens are often involved, they are not always tracked and reported explicitly. Also note that observation resources may be used in contexts that track the specimen explicitly (e.g. Diagnostic Report).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.specimen", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Specimen"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 123038009 |Specimen|" + }, + { + "identity" : "v2", + "map" : "SPM segment" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=SPC].specimen" + }, + { + "identity" : "sct-attr", + "map" : "704319004 |Inherent in|" + }] + }, + { + "id" : "Observation.device", + "path" : "Observation.device", + "short" : "(Measurement) Device", + "definition" : "The device used to generate the observation data.", + "comment" : "Note that this is not meant to represent a device involved in the transmission of the result, e.g., a gateway. Such devices may be documented using the Provenance resource where relevant.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.device", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Device", + "http://hl7.org/fhir/StructureDefinition/DeviceMetric"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 49062001 |Device|" + }, + { + "identity" : "v2", + "map" : "OBX-17 / PRT -10" + }, + { + "identity" : "rim", + "map" : "participation[typeCode=DEV]" + }, + { + "identity" : "sct-attr", + "map" : "424226004 |Using device|" + }] + }, + { + "id" : "Observation.referenceRange", + "path" : "Observation.referenceRange", + "short" : "Provides guide for interpretation", + "definition" : "Guidance on how to interpret the value by comparison to a normal or recommended range. Multiple reference ranges are interpreted as an \"OR\". In other words, to represent two distinct target populations, two `referenceRange` elements would be used.", + "comment" : "Most observations only have one generic reference range. Systems MAY choose to restrict to only supplying the relevant reference range based on knowledge about the patient (e.g., specific to the patient's age, gender, weight and other factors), but this might not be possible or appropriate. Whenever more than one reference range is supplied, the differences between them SHOULD be provided in the reference range and/or age properties.", + "requirements" : "Knowing what values are considered \"normal\" can help evaluate the significance of a particular result. Need to be able to provide multiple reference ranges for different contexts.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.referenceRange", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "obs-3", + "severity" : "error", + "human" : "Must have at least a low or a high or text", + "expression" : "low.exists() or high.exists() or text.exists()", + "xpath" : "(exists(f:low) or exists(f:high)or exists(f:text))", + "source" : "http://hl7.org/fhir/StructureDefinition/Observation" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX.7" + }, + { + "identity" : "rim", + "map" : "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" + }] + }, + { + "id" : "Observation.referenceRange.id", + "path" : "Observation.referenceRange.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.referenceRange.extension", + "path" : "Observation.referenceRange.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.referenceRange.modifierExtension", + "path" : "Observation.referenceRange.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.referenceRange.low", + "path" : "Observation.referenceRange.low", + "short" : "Low Range, if relevant", + "definition" : "The value of the low bound of the reference range. The low bound of the reference range endpoint is inclusive of the value (e.g. reference range is >=5 - <=9). If the low bound is omitted, it is assumed to be meaningless (e.g. reference range is <=2.3).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.low", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Quantity", + "profile" : ["http://hl7.org/fhir/StructureDefinition/SimpleQuantity"] + }], + "condition" : ["obs-3"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX-7" + }, + { + "identity" : "rim", + "map" : "value:IVL_PQ.low" + }] + }, + { + "id" : "Observation.referenceRange.high", + "path" : "Observation.referenceRange.high", + "short" : "High Range, if relevant", + "definition" : "The value of the high bound of the reference range. The high bound of the reference range endpoint is inclusive of the value (e.g. reference range is >=5 - <=9). If the high bound is omitted, it is assumed to be meaningless (e.g. reference range is >= 2.3).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.high", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Quantity", + "profile" : ["http://hl7.org/fhir/StructureDefinition/SimpleQuantity"] + }], + "condition" : ["obs-3"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX-7" + }, + { + "identity" : "rim", + "map" : "value:IVL_PQ.high" + }] + }, + { + "id" : "Observation.referenceRange.type", + "path" : "Observation.referenceRange.type", + "short" : "Reference range qualifier", + "definition" : "Codes to indicate the what part of the targeted reference population it applies to. For example, the normal or therapeutic range.", + "comment" : "This SHOULD be populated if there is more than one range. If this element is not present then the normal range is assumed.", + "requirements" : "Need to be able to say what kind of reference range this is - normal, recommended, therapeutic, etc., - for proper interpretation.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.type", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationRangeMeaning" + }], + "strength" : "preferred", + "description" : "Code for the meaning of a reference range.", + "valueSet" : "http://hl7.org/fhir/ValueSet/referencerange-meaning" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 260245000 |Findings values| OR \r< 365860008 |General clinical state finding| \rOR \r< 250171008 |Clinical history or observation findings| OR \r< 415229000 |Racial group| OR \r< 365400002 |Finding of puberty stage| OR\r< 443938003 |Procedure carried out on subject|" + }, + { + "identity" : "v2", + "map" : "OBX-10" + }, + { + "identity" : "rim", + "map" : "interpretationCode" + }] + }, + { + "id" : "Observation.referenceRange.appliesTo", + "path" : "Observation.referenceRange.appliesTo", + "short" : "Reference range population", + "definition" : "Codes to indicate the target population this reference range applies to. For example, a reference range may be based on the normal population or a particular sex or race. Multiple `appliesTo` are interpreted as an \"AND\" of the target populations. For example, to represent a target population of African American females, both a code of female and a code for African American would be used.", + "comment" : "This SHOULD be populated if there is more than one range. If this element is not present then the normal population is assumed.", + "requirements" : "Need to be able to identify the target population for proper interpretation.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.referenceRange.appliesTo", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationRangeType" + }], + "strength" : "example", + "description" : "Codes identifying the population the reference range applies to.", + "valueSet" : "http://hl7.org/fhir/ValueSet/referencerange-appliesto" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 260245000 |Findings values| OR \r< 365860008 |General clinical state finding| \rOR \r< 250171008 |Clinical history or observation findings| OR \r< 415229000 |Racial group| OR \r< 365400002 |Finding of puberty stage| OR\r< 443938003 |Procedure carried out on subject|" + }, + { + "identity" : "v2", + "map" : "OBX-10" + }, + { + "identity" : "rim", + "map" : "interpretationCode" + }] + }, + { + "id" : "Observation.referenceRange.age", + "path" : "Observation.referenceRange.age", + "short" : "Applicable age range, if relevant", + "definition" : "The age at which this reference range is applicable. This is a neonatal age (e.g. number of weeks at term) if the meaning says so.", + "requirements" : "Some analytes vary greatly over age.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.age", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Range" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "outboundRelationship[typeCode=PRCN].targetObservationCriterion[code=\"age\"].value" + }] + }, + { + "id" : "Observation.referenceRange.text", + "path" : "Observation.referenceRange.text", + "short" : "Text based reference range in an observation", + "definition" : "Text based reference range in an observation which may be used when a quantitative range is not appropriate for an observation. An example would be a reference value of \"Negative\" or a list or table of \"normals\".", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.referenceRange.text", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "string" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX-7" + }, + { + "identity" : "rim", + "map" : "value:ST" + }] + }, + { + "id" : "Observation.hasMember", + "path" : "Observation.hasMember", + "short" : "Related resource that belongs to the Observation group", + "definition" : "This observation is a group observation (e.g. a battery, a panel of tests, a set of vital sign measurements) that includes the target as a member of the group.", + "comment" : "When using this element, an observation will typically have either a value or a set of related resources, although both may be present in some cases. For a discussion on the ways Observations can assembled in groups together, see [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below. Note that a system may calculate results from [QuestionnaireResponse](http://hl7.org/fhir/R4/questionnaireresponse.html) into a final score and represent the score as an Observation.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.hasMember", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Observation", + "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse", + "http://hl7.org/fhir/StructureDefinition/MolecularSequence"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "Relationships established by OBX-4 usage" + }, + { + "identity" : "rim", + "map" : "outBoundRelationship" + }] + }, + { + "id" : "Observation.derivedFrom", + "path" : "Observation.derivedFrom", + "short" : "Related measurements the observation is made from", + "definition" : "The target resource that represents a measurement from which this observation value is derived. For example, a calculated anion gap or a fetal measurement based on an ultrasound image.", + "comment" : "All the reference choices that are listed in this element can represent clinical observations and other measurements that may be the source for a derived value. The most common reference will be another Observation. For a discussion on the ways Observations can assembled in groups together, see [Notes](http://hl7.org/fhir/R4/observation.html#obsgrouping) below.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.derivedFrom", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/DocumentReference", + "http://hl7.org/fhir/StructureDefinition/ImagingStudy", + "http://hl7.org/fhir/StructureDefinition/Media", + "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse", + "http://hl7.org/fhir/StructureDefinition/Observation", + "http://hl7.org/fhir/StructureDefinition/MolecularSequence"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "Relationships established by OBX-4 usage" + }, + { + "identity" : "rim", + "map" : ".targetObservation" + }] + }, + { + "id" : "Observation.component", + "path" : "Observation.component", + "short" : "Component results", + "definition" : "Some observations have multiple component observations. These component observations are expressed as separate code value pairs that share the same attributes. Examples include systolic and diastolic component observations for blood pressure measurement and multiple component observations for genetics observations.", + "comment" : "For a discussion on the ways Observations can be assembled in groups together see [Notes](http://hl7.org/fhir/R4/observation.html#notes) below.", + "requirements" : "Component observations share the same attributes in the Observation resource as the primary observation and are always treated a part of a single observation (they are not separable). However, the reference range for the primary observation value is not inherited by the component values and is required when appropriate for each component observation.", + "min" : 1, + "max" : "*", + "base" : { + "path" : "Observation.component", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "BackboneElement" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "v2", + "map" : "containment by OBX-4?" + }, + { + "identity" : "rim", + "map" : "outBoundRelationship[typeCode=COMP]" + }] + }, + { + "id" : "Observation.component.id", + "path" : "Observation.component.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.component.extension", + "path" : "Observation.component.extension", + "short" : "Additional content defined by implementations", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "alias" : ["extensions", + "user content"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Observation.component.modifierExtension", + "path" : "Observation.component.modifierExtension", + "short" : "Extensions that cannot be ignored even if unrecognized", + "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", + "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", + "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", + "alias" : ["extensions", + "user content", + "modifiers"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "BackboneElement.modifierExtension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : true, + "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", + "isSummary" : true, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Observation.component.code", + "path" : "Observation.component.code", + "short" : "Type of component observation (code / type)", + "definition" : "Describes what was observed. Sometimes this is called the observation \"code\".", + "comment" : "*All* code-value and component.code-component.value pairs need to be taken into account to correctly understand the meaning of the observation.", + "requirements" : "Knowing what kind of observation is being made is essential to understanding the observation.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Observation.component.code", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationCode" + }], + "strength" : "example", + "description" : "Codes identifying names of simple observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-codes" + }, + "mapping" : [{ + "identity" : "w5", + "map" : "FiveWs.what[x]" + }, + { + "identity" : "sct-concept", + "map" : "< 363787002 |Observable entity| OR \r< 386053000 |Evaluation procedure|" + }, + { + "identity" : "v2", + "map" : "OBX-3" + }, + { + "identity" : "rim", + "map" : "code" + }] + }, + { + "id" : "Observation.component.value[x]", + "path" : "Observation.component.value[x]", + "short" : "Actual component result", + "definition" : "The information determined as a result of making the observation, if the information has a simple value.", + "comment" : "Used when observation has a set of component observations. An observation may have both a value (e.g. an Apgar score) and component observations (the observations from which the Apgar score was derived). If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For additional guidance, see the [Notes section](http://hl7.org/fhir/R4/observation.html#notes) below.", + "requirements" : "An observation exists to have a value, though it might not if it is in error, or if it represents a group of observations.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.component.value[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Quantity" + }, + { + "code" : "CodeableConcept" + }, + { + "code" : "string" + }, + { + "code" : "boolean" + }, + { + "code" : "integer" + }, + { + "code" : "Range" + }, + { + "code" : "Ratio" + }, + { + "code" : "SampledData" + }, + { + "code" : "time" + }, + { + "code" : "dateTime" + }, + { + "code" : "Period" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : true, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "363714003 |Interprets| < 441742003 |Evaluation finding|" + }, + { + "identity" : "v2", + "map" : "OBX.2, OBX.5, OBX.6" + }, + { + "identity" : "rim", + "map" : "value" + }, + { + "identity" : "sct-attr", + "map" : "363714003 |Interprets|" + }] + }, + { + "id" : "Observation.component.dataAbsentReason", + "path" : "Observation.component.dataAbsentReason", + "short" : "Why the component result is missing", + "definition" : "Provides a reason why the expected value in the element Observation.component.value[x] is missing.", + "comment" : "\"Null\" or exceptional values can be represented two ways in FHIR Observations. One way is to simply include them in the value set and represent the exceptions in the value. For example, measurement values for a serology test could be \"detected\", \"not detected\", \"inconclusive\", or \"test not done\". \n\nThe alternate way is to use the value element for actual observations and use the explicit dataAbsentReason element to record exceptional values. For example, the dataAbsentReason code \"error\" could be used when the measurement was not completed. Because of these options, use-case agreements are required to interpret general observations for exceptional values.", + "requirements" : "For many results it is necessary to handle exceptional values in measurements.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Observation.component.dataAbsentReason", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "condition" : ["obs-6"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationValueAbsentReason" + }], + "strength" : "extensible", + "description" : "Codes specifying why the result (`Observation.value[x]`) is missing.", + "valueSet" : "http://hl7.org/fhir/ValueSet/data-absent-reason" + }, + "mapping" : [{ + "identity" : "v2", + "map" : "N/A" + }, + { + "identity" : "rim", + "map" : "value.nullFlavor" + }] + }, + { + "id" : "Observation.component.interpretation", + "path" : "Observation.component.interpretation", + "short" : "High, low, normal, etc.", + "definition" : "A categorical assessment of an observation value. For example, high, low, normal.", + "comment" : "Historically used for laboratory results (known as 'abnormal flag' ), its use extends to other use cases where coded interpretations are relevant. Often reported as one or more simple compact codes this element is often placed adjacent to the result value in reports and flow sheets to signal the meaning/normalcy status of the result.", + "requirements" : "For some results, particularly numeric results, an interpretation is necessary to fully understand the significance of a result.", + "alias" : ["Abnormal Flag"], + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.component.interpretation", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "CodeableConcept" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "binding" : { + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName", + "valueString" : "ObservationInterpretation" + }], + "strength" : "extensible", + "description" : "Codes identifying interpretations of observations.", + "valueSet" : "http://hl7.org/fhir/ValueSet/observation-interpretation" + }, + "mapping" : [{ + "identity" : "sct-concept", + "map" : "< 260245000 |Findings values|" + }, + { + "identity" : "v2", + "map" : "OBX-8" + }, + { + "identity" : "rim", + "map" : "interpretationCode" + }, + { + "identity" : "sct-attr", + "map" : "363713009 |Has interpretation|" + }] + }, + { + "id" : "Observation.component.referenceRange", + "path" : "Observation.component.referenceRange", + "short" : "Provides guide for interpretation of component result", + "definition" : "Guidance on how to interpret the value by comparison to a normal or recommended range.", + "comment" : "Most observations only have one generic reference range. Systems MAY choose to restrict to only supplying the relevant reference range based on knowledge about the patient (e.g., specific to the patient's age, gender, weight and other factors), but this might not be possible or appropriate. Whenever more than one reference range is supplied, the differences between them SHOULD be provided in the reference range and/or age properties.", + "requirements" : "Knowing what values are considered \"normal\" can help evaluate the significance of a particular result. Need to be able to provide multiple reference ranges for different contexts.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Observation.component.referenceRange", + "min" : 0, + "max" : "*" + }, + "contentReference" : "http://hl7.org/fhir/StructureDefinition/Observation#Observation.referenceRange", + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "v2", + "map" : "OBX.7" + }, + { + "identity" : "rim", + "map" : "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" + }] + }] + }, + "differential" : { + "element" : [{ + "id" : "Observation", + "path" : "Observation" + }, + { + "id" : "Observation.code.coding", + "path" : "Observation.code.coding", + "patternCoding" : { + "system" : "https://uts.nlm.nih.gov/uts/umls", + "code" : "C0242482", + "display" : "Summary Report" + } + }, + { + "id" : "Observation.subject", + "path" : "Observation.subject", + "type" : [{ + "code" : "Reference", + "targetProfile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group"] + }] + }, + { + "id" : "Observation.focus", + "path" : "Observation.focus", + "min" : 1, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study"] + }] + }, + { + "id" : "Observation.value[x]", + "path" : "Observation.value[x]", + "slicing" : { + "discriminator" : [{ + "type" : "type", + "path" : "$this" + }], + "ordered" : false, + "rules" : "open" + }, + "min" : 1 + }, + { + "id" : "Observation.valueCodeableConcept", + "path" : "Observation.valueCodeableConcept", + "min" : 1, + "max" : "1", + "type" : [{ + "code" : "CodeableConcept" + }] + }, + { + "id" : "Observation.component", + "path" : "Observation.component", + "min" : 1 + }] + } } \ No newline at end of file diff --git a/StructureDefinition-study-variable-summary.profile.history.html b/StructureDefinition-study-variable-summary.profile.history.html index c2c45f21..57cbf763 100644 --- a/StructureDefinition-study-variable-summary.profile.history.html +++ b/StructureDefinition-study-variable-summary.profile.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -298,7 +298,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Change History</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -356,7 +356,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-variable-summary.profile.json.html b/StructureDefinition-study-variable-summary.profile.json.html index 9394f85d..45834083 100644 --- a/StructureDefinition-study-variable-summary.profile.json.html +++ b/StructureDefinition-study-variable-summary.profile.json.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - JSON Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -342,7 +342,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - JSON Profile</h2> "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a>" : "StudyVariableSummary", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a>" : "Study Variable Summary", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a>" : "draft", - "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>" : [ { @@ -3383,7 +3383,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - JSON Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-variable-summary.profile.ttl.html b/StructureDefinition-study-variable-summary.profile.ttl.html index b481451d..2f44e3f9 100644 --- a/StructureDefinition-study-variable-summary.profile.ttl.html +++ b/StructureDefinition-study-variable-summary.profile.ttl.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - TTL Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -329,11 +329,11 @@ <h2 id="root">Resource Profile: StudyVariableSummary - TTL Profile</h2> a fhir:StructureDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "study-variable-summary"]; + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "study-variable-summary"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description &amp; Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation\">Observation</a><a name=\"Observation\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observation.html\">Observation</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Measurements and simple assertions</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.code\">code</a><a name=\"Observation.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck101.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.code.coding\">coding</a><a name=\"Observation.code.coding\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Code defined by a terminology system</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">https://uts.nlm.nih.gov/uts/umls</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">C0242482</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">Summary Report</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.subject\">subject</a><a name=\"Observation.subject\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Who and/or what the observation is about</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.focus\">focus</a><a name=\"Observation.focus\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-ncpi-research-study.html\">NCPI Research Study</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">What the observation is about, when it is not about the subject of record</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck12.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_slice.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Slice Definition\" class=\"hierarchy\"/> <a style=\"font-style: italic\" href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.value[x]\">value[x]</a><a name=\"Observation.value_x_\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"font-style: italic\"/><span style=\"font-style: italic\">1</span><span style=\"font-style: italic\">..</span><span style=\"opacity: 0.5; font-style: italic\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5; font-style: italic\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5; font-style: italic\">Actual result</span><br style=\"font-style: italic\"/><span style=\"font-weight:bold; font-style: italic\">Slice: </span><span style=\"font-style: italic\">Unordered, Open by type:$this</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_datatype.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Data Type\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.valueCodeableConcept\">valueCodeableConcept</a><a name=\"Observation.valueCodeableConcept\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Actual result</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.component\">component</a><a name=\"Observation.component\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#BackboneElement\">BackboneElement</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Component results</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -342,14 +342,14 @@ <h2 id="root">Resource Profile: StudyVariableSummary - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "patient" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-variable-summary"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "StudyVariableSummary"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Study Variable Summary"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-variable-summary"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "StudyVariableSummary"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Study Variable Summary"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">fhir:StructureDefinition.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -365,9 +365,9 @@ <h2 id="root">Resource Profile: StudyVariableSummary - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "An observation containing summary data associated with research data from FHIR."]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "An observation containing summary data associated with research data from FHIR."]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping">fhir:StructureDefinition.mapping</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "workflow" ]; @@ -398,15 +398,15 @@ <h2 id="root">Resource Profile: StudyVariableSummary - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "sct-attr" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.uri">fhir:StructureDefinition.mapping.uri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://snomed.org/attributebinding" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.name">fhir:StructureDefinition.mapping.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "SNOMED CT Attribute Binding" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Observation"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "resource"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Observation"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.baseDefinition">fhir:StructureDefinition.baseDefinition</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/Observation"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/Observation> - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot">fhir:StructureDefinition.snapshot</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot.element">fhir:StructureDefinition.snapshot.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2894,7 +2894,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.identity">fhir:ElementDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "rim" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.map">fhir:ElementDefinition.mapping.map</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" ] ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential">fhir:StructureDefinition.differential</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential.element">fhir:StructureDefinition.differential.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -2951,7 +2951,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.id">fhir:Element.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Observation.component" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.path">fhir:ElementDefinition.path</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Observation.component" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.min">fhir:ElementDefinition.min</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">fhir:value</a> "1"^^xsd:nonNegativeInteger ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -3013,7 +3013,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - TTL Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-variable-summary.profile.xml.html b/StructureDefinition-study-variable-summary.profile.xml.html index 5cf0adf0..3b018a0e 100644 --- a/StructureDefinition-study-variable-summary.profile.xml.html +++ b/StructureDefinition-study-variable-summary.profile.xml.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -301,7 +301,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - XML Profile</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -352,7 +352,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - XML Profile</h2> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="StudyVariableSummary"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Study Variable Summary"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> - <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -3168,7 +3168,7 @@ <h2 id="root">Resource Profile: StudyVariableSummary - XML Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-study-variable-summary.ttl b/StructureDefinition-study-variable-summary.ttl index 42418573..b11d9a67 100644 --- a/StructureDefinition-study-variable-summary.ttl +++ b/StructureDefinition-study-variable-summary.ttl @@ -7,11 +7,11 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-variable-summary> a fhir:StructureDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "study-variable-summary"]; + fhir:Resource.id [ fhir:value "study-variable-summary"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_resource.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation\">Observation</a><a name=\"Observation\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/observation.html\">Observation</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Measurements and simple assertions</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck11.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.code\">code</a><a name=\"Observation.code\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck101.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.code.coding\">coding</a><a name=\"Observation.code.coding\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#Coding\">Coding</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Code defined by a terminology system</span><br/><span style=\"font-weight:bold\">Required Pattern: </span><span style=\"color: darkgreen\">At least the following</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.system\">system</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Identity of the terminology system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">https://uts.nlm.nih.gov/uts/umls</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1010.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#code\">code</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Symbol in syntax defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">C0242482</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1000.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vline.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_blank.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_fixed.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Fixed Value\" class=\"hierarchy\"/> <a href=\"http://hl7.org/fhir/R4/datatypes-definitions.html#Coding.display\">display</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#string\">string</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Representation defined by the system<br/><span style=\"font-weight: bold\">Fixed Value: </span><span style=\"color: darkgreen\">Summary Report</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.subject\">subject</a><a name=\"Observation.subject\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-study-group.html\">NCPI Study Group</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Who and/or what the observation is about</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.focus\">focus</a><a name=\"Observation.focus\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"StructureDefinition-ncpi-research-study.html\">NCPI Research Study</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">What the observation is about, when it is not about the subject of record</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck12.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_slice.png\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Slice Definition\" class=\"hierarchy\"/> <a style=\"font-style: italic\" href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.value[x]\">value[x]</a><a name=\"Observation.value_x_\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"font-style: italic\"/><span style=\"font-style: italic\">1</span><span style=\"font-style: italic\">..</span><span style=\"opacity: 0.5; font-style: italic\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5; font-style: italic\" href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5; font-style: italic\">Actual result</span><br style=\"font-style: italic\"/><span style=\"font-weight:bold; font-style: italic\">Slice: </span><span style=\"font-style: italic\">Unordered, Open by type:$this</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_datatype.gif\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Data Type\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.valueCodeableConcept\">valueCodeableConcept</a><a name=\"Observation.valueCodeableConcept\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Actual result</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-study-variable-summary-definitions.html#Observation.component\">component</a><a name=\"Observation.component\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">1..<span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#BackboneElement\">BackboneElement</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Component results</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-category" ]; @@ -20,14 +20,14 @@ fhir:index 1; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-security-category" ]; fhir:Extension.valueCode [ fhir:value "patient" ] - ]; - fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-variable-summary"]; - fhir:StructureDefinition.version [ fhir:value "0.2.0"]; - fhir:StructureDefinition.name [ fhir:value "StudyVariableSummary"]; - fhir:StructureDefinition.title [ fhir:value "Study Variable Summary"]; - fhir:StructureDefinition.status [ fhir:value "draft"]; - fhir:StructureDefinition.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-variable-summary"]; # + fhir:StructureDefinition.version [ fhir:value "0.2.0"]; # + fhir:StructureDefinition.name [ fhir:value "StudyVariableSummary"]; # + fhir:StructureDefinition.title [ fhir:value "Study Variable Summary"]; # + fhir:StructureDefinition.status [ fhir:value "draft"]; # + fhir:StructureDefinition.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:StructureDefinition.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -45,9 +45,9 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:StructureDefinition.description [ fhir:value "An observation containing summary data associated with research data from FHIR."]; - fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; + ]; # + fhir:StructureDefinition.description [ fhir:value "An observation containing summary data associated with research data from FHIR."]; # + fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; # fhir:StructureDefinition.mapping [ fhir:index 0; fhir:StructureDefinition.mapping.identity [ fhir:value "workflow" ]; @@ -78,15 +78,15 @@ fhir:StructureDefinition.mapping.identity [ fhir:value "sct-attr" ]; fhir:StructureDefinition.mapping.uri [ fhir:value "http://snomed.org/attributebinding" ]; fhir:StructureDefinition.mapping.name [ fhir:value "SNOMED CT Attribute Binding" ] - ]; - fhir:StructureDefinition.kind [ fhir:value "resource"]; - fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; - fhir:StructureDefinition.type [ fhir:value "Observation"]; + ]; # + fhir:StructureDefinition.kind [ fhir:value "resource"]; # + fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; # + fhir:StructureDefinition.type [ fhir:value "Observation"]; # fhir:StructureDefinition.baseDefinition [ fhir:value "http://hl7.org/fhir/StructureDefinition/Observation"; fhir:link <http://hl7.org/fhir/StructureDefinition/Observation> - ]; - fhir:StructureDefinition.derivation [ fhir:value "constraint"]; + ]; # + fhir:StructureDefinition.derivation [ fhir:value "constraint"]; # fhir:StructureDefinition.snapshot [ fhir:StructureDefinition.snapshot.element [ fhir:index 0; @@ -3148,7 +3148,7 @@ fhir:ElementDefinition.mapping.map [ fhir:value "outboundRelationship[typeCode=REFV]/target[classCode=OBS, moodCode=EVN]" ] ] ] - ]; + ]; # fhir:StructureDefinition.differential [ fhir:StructureDefinition.differential.element [ fhir:index 0; @@ -3220,7 +3220,7 @@ fhir:ElementDefinition.path [ fhir:value "Observation.component" ]; fhir:ElementDefinition.min [ fhir:value "1"^^xsd:nonNegativeInteger ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/StructureDefinition-study-variable-summary.xlsx b/StructureDefinition-study-variable-summary.xlsx index 1bb96d77..571456bc 100644 Binary files a/StructureDefinition-study-variable-summary.xlsx and b/StructureDefinition-study-variable-summary.xlsx differ diff --git a/StructureDefinition-study-variable-summary.xml b/StructureDefinition-study-variable-summary.xml index c04b64c6..289a7dce 100644 --- a/StructureDefinition-study-variable-summary.xml +++ b/StructureDefinition-study-variable-summary.xml @@ -27,7 +27,7 @@ <name value="StudyVariableSummary"/> <title value="Study Variable Summary"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/StructureDefinition-supporting-info-definitions.html b/StructureDefinition-supporting-info-definitions.html index 38b04928..6b42c192 100644 --- a/StructureDefinition-supporting-info-definitions.html +++ b/StructureDefinition-supporting-info-definitions.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -287,7 +287,7 @@ <h2 id="root">Extension: SupportingInformation - Detailed Descriptions</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -317,7 +317,8 @@ <h2 id="root">Extension: SupportingInformation - Detailed Descriptions</h2> </ul> <a name="tabs-diff"> </a> <div id="tabs-diff"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Extension"> </a><span style="color: grey">1.</span> <b>Extension</b><a href="#diff_Extension" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>Additional information relevant to interpreting/understanding the report.</p> <span style='color:DarkGray;text-decoration:line-through'><p>Optional Extension Element - found in all resources.</p> @@ -327,14 +328,15 @@ <h2 id="root">Extension: SupportingInformation - Detailed Descriptions</h2> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Extension.url"> </a><span style="color: grey">3.</span> <b>Extension.url</b><a href="#diff_Extension.url" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Fixed Value</td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info</td></tr> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="diff_Extension.value[x]"> </a><a name="diff_Extension.valueReference"> </a><a name="diff_Extension.value[x]:valueReference"> </a><span style="color: grey">4.</span> <b>Extension.value[x]</b><a href="#diff_Extension.value[x]" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td>Choice of: (<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>)), <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#date">date</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Meta">Meta</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Address">Address</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Attachment">Attachment</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#integer">integer</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Count">Count</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#DataRequirement">DataRequirement</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Dosage">Dosage</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#uuid">uuid</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Identifier">Identifier</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Coding">Coding</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#SampledData">SampledData</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#id">id</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#positiveInt">positiveInt</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Distance">Distance</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Period">Period</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Duration">Duration</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Range">Range</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#RelatedArtifact">RelatedArtifact</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#base64Binary">base64Binary</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#UsageContext">UsageContext</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Timing">Timing</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#decimal">decimal</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept">CodeableConcept</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#ParameterDefinition">ParameterDefinition</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">dateTime</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#code">code</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#string">string</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#Contributor">Contributor</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#oid">oid</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#instant">instant</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint">ContactPoint</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#HumanName">HumanName</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Money">Money</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#markdown">markdown</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Ratio">Ratio</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Age">Age</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#TriggerDefinition">TriggerDefinition</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Quantity">Quantity</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#uri">uri</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#url">url</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Annotation">Annotation</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail">ContactDetail</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#boolean">boolean</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Expression">Expression</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Signature">Signature</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">unsignedInt</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#time">time</a></span></td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td>Choice of: (<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>), <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#date">date</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Meta">Meta</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Address">Address</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Attachment">Attachment</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#integer">integer</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Count">Count</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#DataRequirement">DataRequirement</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Dosage">Dosage</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#uuid">uuid</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Identifier">Identifier</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Coding">Coding</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#SampledData">SampledData</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#id">id</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#positiveInt">positiveInt</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Distance">Distance</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Period">Period</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Duration">Duration</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Range">Range</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#RelatedArtifact">RelatedArtifact</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#base64Binary">base64Binary</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#UsageContext">UsageContext</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Timing">Timing</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#decimal">decimal</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept">CodeableConcept</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#ParameterDefinition">ParameterDefinition</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">dateTime</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#code">code</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#string">string</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#Contributor">Contributor</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#oid">oid</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#instant">instant</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint">ContactPoint</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#HumanName">HumanName</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Money">Money</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#markdown">markdown</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Ratio">Ratio</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Age">Age</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#TriggerDefinition">TriggerDefinition</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Quantity">Quantity</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#uri">uri</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#url">url</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Annotation">Annotation</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail">ContactDetail</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#boolean">boolean</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Expression">Expression</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Signature">Signature</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">unsignedInt</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#time">time</a></span></td></tr> <tr><td>[x] Note</td><td>See <a href="http://hl7.org/fhir/R4/formats.html#choice">Choice of Data Types</a> for further information about how to use [x]</td></tr> </table> </div> <a name="tabs-key"> </a> <div id="tabs-key"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="key_Extension"> </a><span style="color: grey">1.</span> <b>Extension</b><a href="#key_Extension" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>Additional information relevant to interpreting/understanding the report.</p> <span style='color:DarkGray;text-decoration:line-through'><p>Optional Extension Element - found in all resources.</p> @@ -367,7 +369,7 @@ <h2 id="root">Extension: SupportingInformation - Detailed Descriptions</h2> <tr><td>Definition</td><td><span style='color:DarkGray'><p>Value of extension - must be one of a constrained set of the data types (see <a href="http://hl7.org/fhir/R4/extensibility.html">Extensibility</a> for a list).</p> </span></td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td><span style='color:DarkGray'>0</span>..<span style='color:DarkGray'>1</span></td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td>Choice of: <span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>)), <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#date">date</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Meta">Meta</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Address">Address</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Attachment">Attachment</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#integer">integer</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Count">Count</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#DataRequirement">DataRequirement</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Dosage">Dosage</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#uuid">uuid</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Identifier">Identifier</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Coding">Coding</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#SampledData">SampledData</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#id">id</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#positiveInt">positiveInt</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Distance">Distance</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Period">Period</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Duration">Duration</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Range">Range</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#RelatedArtifact">RelatedArtifact</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#base64Binary">base64Binary</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#UsageContext">UsageContext</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Timing">Timing</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#decimal">decimal</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept">CodeableConcept</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#ParameterDefinition">ParameterDefinition</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">dateTime</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#code">code</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#string">string</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#Contributor">Contributor</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#oid">oid</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#instant">instant</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint">ContactPoint</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#HumanName">HumanName</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Money">Money</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#markdown">markdown</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Ratio">Ratio</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Age">Age</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#TriggerDefinition">TriggerDefinition</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Quantity">Quantity</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#uri">uri</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#url">url</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Annotation">Annotation</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail">ContactDetail</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#boolean">boolean</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Expression">Expression</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Signature">Signature</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">unsignedInt</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#time">time</a></span></td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td>Choice of: <span style='color:DarkGray'><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a></span>(<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>), <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#date">date</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Meta">Meta</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Address">Address</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Attachment">Attachment</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#integer">integer</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Count">Count</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#DataRequirement">DataRequirement</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Dosage">Dosage</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#uuid">uuid</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Identifier">Identifier</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Coding">Coding</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#SampledData">SampledData</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#id">id</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#positiveInt">positiveInt</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Distance">Distance</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Period">Period</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Duration">Duration</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#canonical">canonical</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Range">Range</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#RelatedArtifact">RelatedArtifact</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#base64Binary">base64Binary</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#UsageContext">UsageContext</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Timing">Timing</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#decimal">decimal</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept">CodeableConcept</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#ParameterDefinition">ParameterDefinition</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">dateTime</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#code">code</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#string">string</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#Contributor">Contributor</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#oid">oid</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#instant">instant</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint">ContactPoint</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#HumanName">HumanName</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Money">Money</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#markdown">markdown</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Ratio">Ratio</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Age">Age</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#TriggerDefinition">TriggerDefinition</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Quantity">Quantity</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#uri">uri</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#url">url</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Annotation">Annotation</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail">ContactDetail</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#boolean">boolean</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Expression">Expression</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#Signature">Signature</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#unsignedInt">unsignedInt</a></span>, <span style='color:DarkGray;text-decoration:line-through'><a href="http://hl7.org/fhir/R4/datatypes.html#time">time</a></span></td></tr> <tr><td>[x] Note</td><td>See <a href="http://hl7.org/fhir/R4/formats.html#choice">Choice of Data Types</a> for further information about how to use [x]</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: <span style='color:DarkGray'>All FHIR elements must have a @value or children</span> (: <span style='color:DarkGray'>hasValue() or (children().count() > id.count())</span>)</td></tr> @@ -376,7 +378,8 @@ <h2 id="root">Extension: SupportingInformation - Detailed Descriptions</h2> </div> <a name="tabs-snap"> </a> <div id="tabs-snap"> - <table class="dict"> + <p>Guidance on how to interpret the contents of this table can be found <a href="https://build.fhir.org/ig/FHIR/ig-guidance//readingIgs.html#data-dictionaries">here</a>.</p> +<table class="dict"> <tr><td colspan="2" class="structure"><span class="self-link-parent"><a name="Extension"> </a><span style="color: grey">1.</span> <b>Extension</b><a href="#Extension" title="link to here" class="self-link"><svg viewBox="0 0 1792 1792" width="16" class="self-link" height="16"><path d="M1520 1216q0-40-28-68l-208-208q-28-28-68-28-42 0-72 32 3 3 19 18.5t21.5 21.5 15 19 13 25.5 3.5 27.5q0 40-28 68t-68 28q-15 0-27.5-3.5t-25.5-13-19-15-21.5-21.5-18.5-19q-33 31-33 73 0 40 28 68l206 207q27 27 68 27 40 0 68-26l147-146q28-28 28-67zm-703-705q0-40-28-68l-206-207q-28-28-68-28-39 0-68 27l-147 146q-28 28-28 67 0 40 28 68l208 208q27 27 68 27 42 0 72-31-3-3-19-18.5t-21.5-21.5-15-19-13-25.5-3.5-27.5q0-40 28-68t68-28q15 0 27.5 3.5t25.5 13 19 15 21.5 21.5 18.5 19q33-31 33-73zm895 705q0 120-85 203l-147 146q-83 83-203 83-121 0-204-85l-206-207q-83-83-83-203 0-123 88-209l-88-88q-86 88-208 88-120 0-204-84l-208-208q-84-84-84-204t85-203l147-146q83-83 203-83 121 0 204 85l206 207q83 83 83 203 0 123-88 209l88 88q86-88 208-88 120 0 204 84l208 208q84 84 84 204z" fill="navy"></path></svg></a></span></td></tr> <tr><td>Definition</td><td><p>Additional information relevant to interpreting/understanding the report.</p> </td></tr> @@ -408,7 +411,7 @@ <h2 id="root">Extension: SupportingInformation - Detailed Descriptions</h2> <tr><td>Definition</td><td><p>Value of extension - must be one of a constrained set of the data types (see <a href="http://hl7.org/fhir/R4/extensibility.html">Extensibility</a> for a list).</p> </td></tr> <tr><td><a href="http://hl7.org/fhir/R4/conformance-rules.html#conformance">Control</a></td><td>0..1</td></tr> - <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>))</td></tr> + <tr><td><a href="http://hl7.org/fhir/R4/datatypes.html">Type</a></td><td><a href="http://hl7.org/fhir/R4/references.html#Reference">Reference</a>(<a href="http://hl7.org/fhir/R4/resource.html" title="http://hl7.org/fhir/StructureDefinition/Resource">Resource</a>)</td></tr> <tr><td>[x] Note</td><td>See <a href="http://hl7.org/fhir/R4/formats.html#choice">Choice of Data Types</a> for further information about how to use [x]</td></tr> <tr><td>Invariants</td><td><b>Defined on this element</b><br/> <b title="Formal Invariant Identifier">ele-1</b>: All FHIR elements must have a @value or children (: hasValue() or (children().count() > id.count()))</td></tr> @@ -468,7 +471,7 @@ <h2 id="root">Extension: SupportingInformation - Detailed Descriptions</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-supporting-info-mappings.html b/StructureDefinition-supporting-info-mappings.html index 7eca21f0..ba8c3e3d 100644 --- a/StructureDefinition-supporting-info-mappings.html +++ b/StructureDefinition-supporting-info-mappings.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -287,7 +287,7 @@ <h2 id="root">Extension: SupportingInformation - Mappings</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -363,7 +363,7 @@ <h2 id="root">Extension: SupportingInformation - Mappings</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-supporting-info-testing.html b/StructureDefinition-supporting-info-testing.html index 6cd8b3c2..30207654 100644 --- a/StructureDefinition-supporting-info-testing.html +++ b/StructureDefinition-supporting-info-testing.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -287,7 +287,7 @@ <h2 id="root">Extension: SupportingInformation - Testing</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -352,7 +352,7 @@ <h2 id="root">Extension: SupportingInformation - Testing</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-supporting-info.html b/StructureDefinition-supporting-info.html index 5f9afb5f..3d3cdc0c 100644 --- a/StructureDefinition-supporting-info.html +++ b/StructureDefinition-supporting-info.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -300,7 +300,7 @@ <h2 id="root">Extension: Supporting Information Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -327,7 +327,7 @@ <h2 id="root">Extension: Supporting Information <p>This extension may be used on the following element(s):</p> <ul> - <li>Element</li> + <li>Element ID Element</li> </ul> @@ -610,7 +610,7 @@ <h4>Constraints</h4> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-supporting-info.json b/StructureDefinition-supporting-info.json index 00029a81..9622a6ab 100644 --- a/StructureDefinition-supporting-info.json +++ b/StructureDefinition-supporting-info.json @@ -1,296 +1,240 @@ -{ - "resourceType": "StructureDefinition", - "id": "supporting-info", - "text": { - "status": "extensions", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-supporting-info-definitions.html#Extension\" title=\"Additional information relevant to interpreting/understanding the report.\">Extension</a><a name=\"Extension\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/extensibility.html#Extension\">Extension</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Supporting Information</td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_extension_simple.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Simple Extension\" class=\"hierarchy\"/> <span style=\"text-decoration:line-through\">extension</span><a name=\"Extension.extension\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"text-decoration:line-through\"/><span style=\"text-decoration:line-through\">0</span><span style=\"text-decoration:line-through\">..</span><span style=\"text-decoration:line-through\">0</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-supporting-info-definitions.html#Extension.url\">url</a><a name=\"Extension.url\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"color: darkgreen\">"https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info"</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-supporting-info-definitions.html#Extension.value[x]\">value[x]</a><a name=\"Extension.value_x_\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/resource.html\">Resource</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Value of extension</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - }, - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info", - "version": "0.2.0", - "name": "SupportingInformation", - "title": "Supporting Information", - "status": "active", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "Additional information relevant to interpreting/understanding the report.", - "jurisdiction": [ - { - "coding": [ - { - "system": "http://unstats.un.org/unsd/methods/m49/m49.htm", - "code": "001" - } - ] - } - ], - "fhirVersion": "4.0.1", - "mapping": [ - { - "identity": "rim", - "uri": "http://hl7.org/v3", - "name": "RIM Mapping" - } - ], - "kind": "complex-type", - "abstract": false, - "context": [ - { - "type": "element", - "expression": "Element" - } - ], - "type": "Extension", - "baseDefinition": "http://hl7.org/fhir/StructureDefinition/Extension", - "derivation": "constraint", - "snapshot": { - "element": [ - { - "id": "Extension", - "path": "Extension", - "short": "Supporting Information", - "definition": "Additional information relevant to interpreting/understanding the report.", - "min": 0, - "max": "*", - "base": { - "path": "Extension", - "min": 0, - "max": "*" - }, - "condition": [ - "ele-1" - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), 'value')])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false - }, - { - "id": "Extension.id", - "path": "Extension.id", - "representation": [ - "xmlAttr" - ], - "short": "Unique id for inter-element referencing", - "definition": "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", - "min": 0, - "max": "1", - "base": { - "path": "Element.id", - "min": 0, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "string" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "n/a" - } - ] - }, - { - "id": "Extension.extension", - "path": "Extension.extension", - "slicing": { - "discriminator": [ - { - "type": "value", - "path": "url" - } - ], - "description": "Extensions are always sliced by (at least) url", - "rules": "open" - }, - "short": "Extension", - "definition": "An Extension", - "min": 0, - "max": "0", - "base": { - "path": "Element.extension", - "min": 0, - "max": "*" - }, - "type": [ - { - "code": "Extension" - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - }, - { - "key": "ext-1", - "severity": "error", - "human": "Must have either extensions or value[x], not both", - "expression": "extension.exists() != value.exists()", - "xpath": "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", - "source": "http://hl7.org/fhir/StructureDefinition/Extension" - } - ], - "isModifier": false, - "isSummary": false - }, - { - "id": "Extension.url", - "path": "Extension.url", - "representation": [ - "xmlAttr" - ], - "short": "identifies the meaning of the extension", - "definition": "Source of the definition for the extension code - a logical name or a URL.", - "comment": "The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.", - "min": 1, - "max": "1", - "base": { - "path": "Extension.url", - "min": 1, - "max": "1" - }, - "type": [ - { - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", - "valueUrl": "uri" - } - ], - "code": "http://hl7.org/fhirpath/System.String" - } - ], - "fixedUri": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info", - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - }, - { - "id": "Extension.value[x]", - "path": "Extension.value[x]", - "short": "Value of extension", - "definition": "Value of extension - must be one of a constrained set of the data types (see [Extensibility](http://hl7.org/fhir/R4/extensibility.html) for a list).", - "min": 0, - "max": "1", - "base": { - "path": "Extension.value[x]", - "min": 0, - "max": "1" - }, - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Resource" - ] - } - ], - "constraint": [ - { - "key": "ele-1", - "severity": "error", - "human": "All FHIR elements must have a @value or children", - "expression": "hasValue() or (children().count() > id.count())", - "xpath": "@value|f:*|h:div", - "source": "http://hl7.org/fhir/StructureDefinition/Element" - } - ], - "isModifier": false, - "isSummary": false, - "mapping": [ - { - "identity": "rim", - "map": "N/A" - } - ] - } - ] - }, - "differential": { - "element": [ - { - "id": "Extension", - "path": "Extension", - "short": "Supporting Information", - "definition": "Additional information relevant to interpreting/understanding the report." - }, - { - "id": "Extension.extension", - "path": "Extension.extension", - "max": "0" - }, - { - "id": "Extension.url", - "path": "Extension.url", - "fixedUri": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info" - }, - { - "id": "Extension.value[x]", - "path": "Extension.value[x]", - "type": [ - { - "code": "Reference", - "targetProfile": [ - "http://hl7.org/fhir/StructureDefinition/Resource" - ] - } - ] - } - ] - } +{ + "resourceType" : "StructureDefinition", + "id" : "supporting-info", + "text" : { + "status" : "extensions", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-supporting-info-definitions.html#Extension\" title=\"Additional information relevant to interpreting/understanding the report.\">Extension</a><a name=\"Extension\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/extensibility.html#Extension\">Extension</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Supporting Information</td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_extension_simple.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Simple Extension\" class=\"hierarchy\"/> <span style=\"text-decoration:line-through\">extension</span><a name=\"Extension.extension\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"text-decoration:line-through\"/><span style=\"text-decoration:line-through\">0</span><span style=\"text-decoration:line-through\">..</span><span style=\"text-decoration:line-through\">0</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-supporting-info-definitions.html#Extension.url\">url</a><a name=\"Extension.url\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"color: darkgreen\">"https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info"</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-supporting-info-definitions.html#Extension.value[x]\">value[x]</a><a name=\"Extension.value_x_\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/resource.html\">Resource</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Value of extension</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" + }, + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info", + "version" : "0.2.0", + "name" : "SupportingInformation", + "title" : "Supporting Information", + "status" : "active", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "Additional information relevant to interpreting/understanding the report.", + "jurisdiction" : [{ + "coding" : [{ + "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm", + "code" : "001" + }] + }], + "fhirVersion" : "4.0.1", + "mapping" : [{ + "identity" : "rim", + "uri" : "http://hl7.org/v3", + "name" : "RIM Mapping" + }], + "kind" : "complex-type", + "abstract" : false, + "context" : [{ + "type" : "element", + "expression" : "Element" + }], + "type" : "Extension", + "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/Extension", + "derivation" : "constraint", + "snapshot" : { + "element" : [{ + "id" : "Extension", + "path" : "Extension", + "short" : "Supporting Information", + "definition" : "Additional information relevant to interpreting/understanding the report.", + "min" : 0, + "max" : "*", + "base" : { + "path" : "Extension", + "min" : 0, + "max" : "*" + }, + "condition" : ["ele-1"], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), 'value')])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false + }, + { + "id" : "Extension.id", + "path" : "Extension.id", + "representation" : ["xmlAttr"], + "short" : "Unique id for inter-element referencing", + "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Element.id", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "string" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "n/a" + }] + }, + { + "id" : "Extension.extension", + "path" : "Extension.extension", + "slicing" : { + "discriminator" : [{ + "type" : "value", + "path" : "url" + }], + "description" : "Extensions are always sliced by (at least) url", + "rules" : "open" + }, + "short" : "Extension", + "definition" : "An Extension", + "min" : 0, + "max" : "0", + "base" : { + "path" : "Element.extension", + "min" : 0, + "max" : "*" + }, + "type" : [{ + "code" : "Extension" + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }, + { + "key" : "ext-1", + "severity" : "error", + "human" : "Must have either extensions or value[x], not both", + "expression" : "extension.exists() != value.exists()", + "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", + "source" : "http://hl7.org/fhir/StructureDefinition/Extension" + }], + "isModifier" : false, + "isSummary" : false + }, + { + "id" : "Extension.url", + "path" : "Extension.url", + "representation" : ["xmlAttr"], + "short" : "identifies the meaning of the extension", + "definition" : "Source of the definition for the extension code - a logical name or a URL.", + "comment" : "The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.", + "min" : 1, + "max" : "1", + "base" : { + "path" : "Extension.url", + "min" : 1, + "max" : "1" + }, + "type" : [{ + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", + "valueUrl" : "uri" + }], + "code" : "http://hl7.org/fhirpath/System.String" + }], + "fixedUri" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info", + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }, + { + "id" : "Extension.value[x]", + "path" : "Extension.value[x]", + "short" : "Value of extension", + "definition" : "Value of extension - must be one of a constrained set of the data types (see [Extensibility](http://hl7.org/fhir/R4/extensibility.html) for a list).", + "min" : 0, + "max" : "1", + "base" : { + "path" : "Extension.value[x]", + "min" : 0, + "max" : "1" + }, + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Resource"] + }], + "constraint" : [{ + "key" : "ele-1", + "severity" : "error", + "human" : "All FHIR elements must have a @value or children", + "expression" : "hasValue() or (children().count() > id.count())", + "xpath" : "@value|f:*|h:div", + "source" : "http://hl7.org/fhir/StructureDefinition/Element" + }], + "isModifier" : false, + "isSummary" : false, + "mapping" : [{ + "identity" : "rim", + "map" : "N/A" + }] + }] + }, + "differential" : { + "element" : [{ + "id" : "Extension", + "path" : "Extension", + "short" : "Supporting Information", + "definition" : "Additional information relevant to interpreting/understanding the report." + }, + { + "id" : "Extension.extension", + "path" : "Extension.extension", + "max" : "0" + }, + { + "id" : "Extension.url", + "path" : "Extension.url", + "fixedUri" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info" + }, + { + "id" : "Extension.value[x]", + "path" : "Extension.value[x]", + "type" : [{ + "code" : "Reference", + "targetProfile" : ["http://hl7.org/fhir/StructureDefinition/Resource"] + }] + }] + } } \ No newline at end of file diff --git a/StructureDefinition-supporting-info.profile.history.html b/StructureDefinition-supporting-info.profile.history.html index 472b651e..058c7935 100644 --- a/StructureDefinition-supporting-info.profile.history.html +++ b/StructureDefinition-supporting-info.profile.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -288,7 +288,7 @@ <h2 id="root">Extension: SupportingInformation - Change History</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -346,7 +346,7 @@ <h2 id="root">Extension: SupportingInformation - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-supporting-info.profile.json.html b/StructureDefinition-supporting-info.profile.json.html index a12d7f2a..1736bfc8 100644 --- a/StructureDefinition-supporting-info.profile.json.html +++ b/StructureDefinition-supporting-info.profile.json.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -291,7 +291,7 @@ <h2 id="root">Extension: SupportingInformation - JSON Profile</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -322,7 +322,7 @@ <h2 id="root">Extension: SupportingInformation - JSON Profile</h2> "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a>" : "SupportingInformation", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a>" : "Supporting Information", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a>" : "active", - "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>" : [ { @@ -659,7 +659,7 @@ <h2 id="root">Extension: SupportingInformation - JSON Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-supporting-info.profile.ttl.html b/StructureDefinition-supporting-info.profile.ttl.html index e9b9f538..5fbd957e 100644 --- a/StructureDefinition-supporting-info.profile.ttl.html +++ b/StructureDefinition-supporting-info.profile.ttl.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -291,7 +291,7 @@ <h2 id="root">Extension: SupportingInformation - TTL Profile</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -319,18 +319,18 @@ <h2 id="root">Extension: SupportingInformation - TTL Profile</h2> a fhir:StructureDefinition; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "supporting-info"]; + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "supporting-info"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description &amp; Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-supporting-info-definitions.html#Extension\" title=\"Additional information relevant to interpreting/understanding the report.\">Extension</a><a name=\"Extension\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/extensibility.html#Extension\">Extension</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Supporting Information</td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_extension_simple.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Simple Extension\" class=\"hierarchy\"/> <span style=\"text-decoration:line-through\">extension</span><a name=\"Extension.extension\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"text-decoration:line-through\"/><span style=\"text-decoration:line-through\">0</span><span style=\"text-decoration:line-through\">..</span><span style=\"text-decoration:line-through\">0</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-supporting-info-definitions.html#Extension.url\">url</a><a name=\"Extension.url\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"color: darkgreen\">&quot;https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info&quot;</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-supporting-info-definitions.html#Extension.value[x]\">value[x]</a><a name=\"Extension.value_x_\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/resource.html\">Resource</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Value of extension</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "SupportingInformation"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Supporting Information"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.url">fhir:StructureDefinition.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.version">fhir:StructureDefinition.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">fhir:StructureDefinition.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "SupportingInformation"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">fhir:StructureDefinition.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Supporting Information"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">fhir:StructureDefinition.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">fhir:StructureDefinition.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">fhir:StructureDefinition.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">fhir:StructureDefinition.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -346,35 +346,35 @@ <h2 id="root">Extension: SupportingInformation - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Additional information relevant to interpreting/understanding the report."]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.description">fhir:StructureDefinition.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Additional information relevant to interpreting/understanding the report."]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.jurisdiction">fhir:StructureDefinition.jurisdiction</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://unstats.un.org/unsd/methods/m49/m49.htm" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "001" ] ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.fhirVersion">fhir:StructureDefinition.fhirVersion</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "4.0.1"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping">fhir:StructureDefinition.mapping</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.identity">fhir:StructureDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "rim" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.uri">fhir:StructureDefinition.mapping.uri</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/v3" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.mapping.name">fhir:StructureDefinition.mapping.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "RIM Mapping" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "complex-type"]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.kind">fhir:StructureDefinition.kind</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "complex-type"]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.abstract">fhir:StructureDefinition.abstract</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.context">fhir:StructureDefinition.context</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.context.type">fhir:StructureDefinition.context.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "element" ]; <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.context.expression">fhir:StructureDefinition.context.expression</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Element" ] - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Extension"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.type">fhir:StructureDefinition.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "Extension"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.baseDefinition">fhir:StructureDefinition.baseDefinition</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/Extension"; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/Extension> - ]; - <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; + ]; # + <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.derivation">fhir:StructureDefinition.derivation</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "constraint"]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot">fhir:StructureDefinition.snapshot</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.snapshot.element">fhir:StructureDefinition.snapshot.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -543,7 +543,7 @@ <h2 id="root">Extension: SupportingInformation - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.identity">fhir:ElementDefinition.mapping.identity</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "rim" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ElementDefinition#ElementDefinition.mapping.map">fhir:ElementDefinition.mapping.map</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "N/A" ] ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential">fhir:StructureDefinition.differential</a> [ <a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.differential.element">fhir:StructureDefinition.differential.element</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -569,7 +569,7 @@ <h2 id="root">Extension: SupportingInformation - TTL Profile</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/Resource"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/Resource> ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -631,7 +631,7 @@ <h2 id="root">Extension: SupportingInformation - TTL Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-supporting-info.profile.xml.html b/StructureDefinition-supporting-info.profile.xml.html index a855e2e6..f98b8a34 100644 --- a/StructureDefinition-supporting-info.profile.xml.html +++ b/StructureDefinition-supporting-info.profile.xml.html @@ -158,7 +158,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -291,7 +291,7 @@ <h2 id="root">Extension: SupportingInformation - XML Profile</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -327,7 +327,7 @@ <h2 id="root">Extension: SupportingInformation - XML Profile</h2> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="SupportingInformation"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Supporting Information"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="active"/> - <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/structuredefinition.html#StructureDefinition.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -615,7 +615,7 @@ <h2 id="root">Extension: SupportingInformation - XML Profile</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/StructureDefinition-supporting-info.ttl b/StructureDefinition-supporting-info.ttl index 92900c26..c222c1c4 100644 --- a/StructureDefinition-supporting-info.ttl +++ b/StructureDefinition-supporting-info.ttl @@ -7,18 +7,18 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info> a fhir:StructureDefinition; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "supporting-info"]; + fhir:Resource.id [ fhir:value "supporting-info"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "extensions" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-supporting-info-definitions.html#Extension\" title=\"Additional information relevant to interpreting/understanding the report.\">Extension</a><a name=\"Extension\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/extensibility.html#Extension\">Extension</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">Supporting Information</td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_extension_simple.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Simple Extension\" class=\"hierarchy\"/> <span style=\"text-decoration:line-through\">extension</span><a name=\"Extension.extension\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"text-decoration:line-through\"/><span style=\"text-decoration:line-through\">0</span><span style=\"text-decoration:line-through\">..</span><span style=\"text-decoration:line-through\">0</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-supporting-info-definitions.html#Extension.url\">url</a><a name=\"Extension.url\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">1</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a style=\"opacity: 0.5\" href=\"http://hl7.org/fhir/R4/datatypes.html#uri\">uri</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"color: darkgreen\">"https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info"</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_reference.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Reference to another Resource\" class=\"hierarchy\"/> <a href=\"StructureDefinition-supporting-info-definitions.html#Extension.value[x]\">value[x]</a><a name=\"Extension.value_x_\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">1</span></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/references.html\">Reference</a>(<a href=\"http://hl7.org/fhir/R4/resource.html\">Resource</a>)</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Value of extension</span></td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>" - ]; - fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info"]; - fhir:StructureDefinition.version [ fhir:value "0.2.0"]; - fhir:StructureDefinition.name [ fhir:value "SupportingInformation"]; - fhir:StructureDefinition.title [ fhir:value "Supporting Information"]; - fhir:StructureDefinition.status [ fhir:value "active"]; - fhir:StructureDefinition.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:StructureDefinition.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info"]; # + fhir:StructureDefinition.version [ fhir:value "0.2.0"]; # + fhir:StructureDefinition.name [ fhir:value "SupportingInformation"]; # + fhir:StructureDefinition.title [ fhir:value "Supporting Information"]; # + fhir:StructureDefinition.status [ fhir:value "active"]; # + fhir:StructureDefinition.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:StructureDefinition.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:StructureDefinition.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -36,8 +36,8 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:StructureDefinition.description [ fhir:value "Additional information relevant to interpreting/understanding the report."]; + ]; # + fhir:StructureDefinition.description [ fhir:value "Additional information relevant to interpreting/understanding the report."]; # fhir:StructureDefinition.jurisdiction [ fhir:index 0; fhir:CodeableConcept.coding [ @@ -45,27 +45,27 @@ fhir:Coding.system [ fhir:value "http://unstats.un.org/unsd/methods/m49/m49.htm" ]; fhir:Coding.code [ fhir:value "001" ] ] - ]; - fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; + ]; # + fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"]; # fhir:StructureDefinition.mapping [ fhir:index 0; fhir:StructureDefinition.mapping.identity [ fhir:value "rim" ]; fhir:StructureDefinition.mapping.uri [ fhir:value "http://hl7.org/v3" ]; fhir:StructureDefinition.mapping.name [ fhir:value "RIM Mapping" ] - ]; - fhir:StructureDefinition.kind [ fhir:value "complex-type"]; - fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; + ]; # + fhir:StructureDefinition.kind [ fhir:value "complex-type"]; # + fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean]; # fhir:StructureDefinition.context [ fhir:index 0; fhir:StructureDefinition.context.type [ fhir:value "element" ]; fhir:StructureDefinition.context.expression [ fhir:value "Element" ] - ]; - fhir:StructureDefinition.type [ fhir:value "Extension"]; + ]; # + fhir:StructureDefinition.type [ fhir:value "Extension"]; # fhir:StructureDefinition.baseDefinition [ fhir:value "http://hl7.org/fhir/StructureDefinition/Extension"; fhir:link <http://hl7.org/fhir/StructureDefinition/Extension> - ]; - fhir:StructureDefinition.derivation [ fhir:value "constraint"]; + ]; # + fhir:StructureDefinition.derivation [ fhir:value "constraint"]; # fhir:StructureDefinition.snapshot [ fhir:StructureDefinition.snapshot.element [ fhir:index 0; @@ -269,7 +269,7 @@ fhir:ElementDefinition.mapping.map [ fhir:value "N/A" ] ] ] - ]; + ]; # fhir:StructureDefinition.differential [ fhir:StructureDefinition.differential.element [ fhir:index 0; @@ -301,7 +301,7 @@ ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/StructureDefinition-supporting-info.xlsx b/StructureDefinition-supporting-info.xlsx index 641741cf..f980edb7 100644 Binary files a/StructureDefinition-supporting-info.xlsx and b/StructureDefinition-supporting-info.xlsx differ diff --git a/StructureDefinition-supporting-info.xml b/StructureDefinition-supporting-info.xml index d8fbc540..0e1c6e4d 100644 --- a/StructureDefinition-supporting-info.xml +++ b/StructureDefinition-supporting-info.xml @@ -14,7 +14,7 @@ <name value="SupportingInformation"/> <title value="Supporting Information"/> <status value="active"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/Task-task-example-1.change.history.html b/Task-task-example-1.change.history.html index f45efb3f..5417612a 100644 --- a/Task-task-example-1.change.history.html +++ b/Task-task-example-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Task/task-example-1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Task-task-example-1.html b/Task-task-example-1.html index f2ae18eb..d609e1b5 100644 --- a/Task-task-example-1.html +++ b/Task-task-example-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Task: task-example-1</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Task-task-example-1.json b/Task-task-example-1.json index e259bbd7..b43a71f5 100644 --- a/Task-task-example-1.json +++ b/Task-task-example-1.json @@ -1,30 +1,26 @@ -{ - "resourceType": "Task", - "id": "task-example-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Task</b><a name=\"task-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Task "task-example-1" </p></div><p><b>status</b>: completed</p><p><b>intent</b>: order</p><h3>Inputs</h3><table class=\"grid\"><tr><td>-</td><td><b>Type</b></td><td><b>Value[x]</b></td></tr><tr><td>*</td><td>Specimen <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></td><td><a href=\"Specimen-specimen-example-1.html\">Specimen/specimen-example-1</a></td></tr></table><h3>Outputs</h3><table class=\"grid\"><tr><td>-</td><td><b>Type</b></td><td><b>Value[x]</b></td></tr><tr><td>*</td><td>DocumentReference <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></td><td><a href=\"DocumentReference-drs-document-reference-example-1.html\">DocumentReference/drs-document-reference-example-1</a></td></tr></table></div>" - }, - "status": "completed", - "intent": "order", - "input": [ - { - "type": { - "text": "Specimen" - }, - "valueReference": { - "reference": "Specimen/specimen-example-1" - } - } - ], - "output": [ - { - "type": { - "text": "DocumentReference" - }, - "valueReference": { - "reference": "DocumentReference/drs-document-reference-example-1" - } - } - ] +{ + "resourceType" : "Task", + "id" : "task-example-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Task</b><a name=\"task-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Task "task-example-1" </p></div><p><b>status</b>: completed</p><p><b>intent</b>: order</p><h3>Inputs</h3><table class=\"grid\"><tr><td>-</td><td><b>Type</b></td><td><b>Value[x]</b></td></tr><tr><td>*</td><td>Specimen <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></td><td><a href=\"Specimen-specimen-example-1.html\">Specimen/specimen-example-1</a></td></tr></table><h3>Outputs</h3><table class=\"grid\"><tr><td>-</td><td><b>Type</b></td><td><b>Value[x]</b></td></tr><tr><td>*</td><td>DocumentReference <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></td><td><a href=\"DocumentReference-drs-document-reference-example-1.html\">DocumentReference/drs-document-reference-example-1</a></td></tr></table></div>" + }, + "status" : "completed", + "intent" : "order", + "input" : [{ + "type" : { + "text" : "Specimen" + }, + "valueReference" : { + "reference" : "Specimen/specimen-example-1" + } + }], + "output" : [{ + "type" : { + "text" : "DocumentReference" + }, + "valueReference" : { + "reference" : "DocumentReference/drs-document-reference-example-1" + } + }] } \ No newline at end of file diff --git a/Task-task-example-1.json.html b/Task-task-example-1.json.html index 969189ef..97113a4d 100644 --- a/Task-task-example-1.json.html +++ b/Task-task-example-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -342,7 +342,7 @@ <h2 id="root">: task-example-1 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Task-task-example-1.ttl b/Task-task-example-1.ttl index 1db5180f..d99bec7c 100644 --- a/Task-task-example-1.ttl +++ b/Task-task-example-1.ttl @@ -7,13 +7,13 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Task/task-example-1> a fhir:Task; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "task-example-1"]; + fhir:Resource.id [ fhir:value "task-example-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Task</b><a name=\"task-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Task "task-example-1" </p></div><p><b>status</b>: completed</p><p><b>intent</b>: order</p><h3>Inputs</h3><table class=\"grid\"><tr><td>-</td><td><b>Type</b></td><td><b>Value[x]</b></td></tr><tr><td>*</td><td>Specimen <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></td><td><a href=\"Specimen-specimen-example-1.html\">Specimen/specimen-example-1</a></td></tr></table><h3>Outputs</h3><table class=\"grid\"><tr><td>-</td><td><b>Type</b></td><td><b>Value[x]</b></td></tr><tr><td>*</td><td>DocumentReference <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></td><td><a href=\"DocumentReference-drs-document-reference-example-1.html\">DocumentReference/drs-document-reference-example-1</a></td></tr></table></div>" - ]; - fhir:Task.status [ fhir:value "completed"]; - fhir:Task.intent [ fhir:value "order"]; + ]; # + fhir:Task.status [ fhir:value "completed"]; # + fhir:Task.intent [ fhir:value "order"]; # fhir:Task.input [ fhir:index 0; fhir:Task.input.type [ @@ -23,7 +23,7 @@ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Specimen/specimen-example-1>; fhir:Reference.reference [ fhir:value "Specimen/specimen-example-1" ] ] - ]; + ]; # fhir:Task.output [ fhir:index 0; fhir:Task.output.type [ @@ -33,7 +33,7 @@ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/DocumentReference/drs-document-reference-example-1>; fhir:Reference.reference [ fhir:value "DocumentReference/drs-document-reference-example-1" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Task-task-example-1.ttl.html b/Task-task-example-1.ttl.html index 1e2eec5e..10e3f7a0 100644 --- a/Task-task-example-1.ttl.html +++ b/Task-task-example-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,27 +292,27 @@ <h2 id="root">: task-example-1 - TTL Representation</h2> a fhir:Task; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/task.html#Task.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "task-example-1"]; + <a href="http://hl7.org/fhir/R4/task.html#Task.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "task-example-1"]; # <a href="http://hl7.org/fhir/R4/task.html#Task.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Task</b><a name=\"task-example-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Task &quot;task-example-1&quot; </p></div><p><b>status</b>: completed</p><p><b>intent</b>: order</p><h3>Inputs</h3><table class=\"grid\"><tr><td>-</td><td><b>Type</b></td><td><b>Value[x]</b></td></tr><tr><td>*</td><td>Specimen <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></td><td><a href=\"Specimen-specimen-example-1.html\">Specimen/specimen-example-1</a></td></tr></table><h3>Outputs</h3><table class=\"grid\"><tr><td>-</td><td><b>Type</b></td><td><b>Value[x]</b></td></tr><tr><td>*</td><td>DocumentReference <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></td><td><a href=\"DocumentReference-drs-document-reference-example-1.html\">DocumentReference/drs-document-reference-example-1</a></td></tr></table></div>" - ]; - <a href="http://hl7.org/fhir/R4/task.html#Task.status">fhir:Task.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "completed"]; - <a href="http://hl7.org/fhir/R4/task.html#Task.intent">fhir:Task.intent</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "order"]; + ]; # + <a href="http://hl7.org/fhir/R4/task.html#Task.status">fhir:Task.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "completed"]; # + <a href="http://hl7.org/fhir/R4/task.html#Task.intent">fhir:Task.intent</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "order"]; # <a href="http://hl7.org/fhir/R4/task.html#Task.input">fhir:Task.input</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/task.html#Task.input.type">fhir:Task.input.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.text">fhir:CodeableConcept.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Specimen" ] ]; <a href="http://hl7.org/fhir/R4/task.html#Task.input.value[x]">fhir:Task.input.valueReference</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Specimen/specimen-example-1" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/task.html#Task.output">fhir:Task.output</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/task.html#Task.output.type">fhir:Task.output.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.text">fhir:CodeableConcept.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "DocumentReference" ] ]; <a href="http://hl7.org/fhir/R4/task.html#Task.output.value[x]">fhir:Task.output.valueReference</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "DocumentReference/drs-document-reference-example-1" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -350,7 +350,7 @@ <h2 id="root">: task-example-1 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Task-task-example-1.xml.html b/Task-task-example-1.xml.html index 3369ae8e..f2df922b 100644 --- a/Task-task-example-1.xml.html +++ b/Task-task-example-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -338,7 +338,7 @@ <h2 id="root">: task-example-1 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Task-task-example-2.change.history.html b/Task-task-example-2.change.history.html index a12dd29a..d4233a01 100644 --- a/Task-task-example-2.change.history.html +++ b/Task-task-example-2.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Task/task-example-2 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Task-task-example-2.html b/Task-task-example-2.html index 533566bd..45aa4a93 100644 --- a/Task-task-example-2.html +++ b/Task-task-example-2.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">Example Task: task-example-2</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Task-task-example-2.json b/Task-task-example-2.json index 7287a580..24a9edf0 100644 --- a/Task-task-example-2.json +++ b/Task-task-example-2.json @@ -1,44 +1,38 @@ -{ - "resourceType": "Task", - "id": "task-example-2", - "meta": { - "profile": [ - "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-specimen-task" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Task</b><a name=\"task-example-2\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Task "task-example-2" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-ncpi-specimen-task.html\">Research Task</a></p></div><p><b>status</b>: completed</p><p><b>intent</b>: order</p><p><b>focus</b>: <a href=\"Specimen-specimen-example-1.html\">Specimen/specimen-example-1</a></p><p><b>for</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> " SMITH"</p><p><b>owner</b>: <a href=\"Organization-organization-example-1.html\">Organization/organization-example-1</a> "Amazing Children's Hospital"</p><h3>Inputs</h3><table class=\"grid\"><tr><td>-</td><td><b>Type</b></td><td><b>Value[x]</b></td></tr><tr><td>*</td><td>Specimen <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></td><td><a href=\"Specimen-specimen-example-1.html\">Specimen/specimen-example-1</a></td></tr></table><h3>Outputs</h3><table class=\"grid\"><tr><td>-</td><td><b>Type</b></td><td><b>Value[x]</b></td></tr><tr><td>*</td><td>DocumentReference <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></td><td><a href=\"DocumentReference-research-document-reference-example-1.html\">DocumentReference/research-document-reference-example-1</a></td></tr></table></div>" - }, - "status": "completed", - "intent": "order", - "focus": { - "reference": "Specimen/specimen-example-1" - }, - "for": { - "reference": "Patient/patient-example-3" - }, - "owner": { - "reference": "Organization/organization-example-1" - }, - "input": [ - { - "type": { - "text": "Specimen" - }, - "valueReference": { - "reference": "Specimen/specimen-example-1" - } - } - ], - "output": [ - { - "type": { - "text": "DocumentReference" - }, - "valueReference": { - "reference": "DocumentReference/research-document-reference-example-1" - } - } - ] +{ + "resourceType" : "Task", + "id" : "task-example-2", + "meta" : { + "profile" : ["https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-specimen-task"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Task</b><a name=\"task-example-2\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Task "task-example-2" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-ncpi-specimen-task.html\">Research Task</a></p></div><p><b>status</b>: completed</p><p><b>intent</b>: order</p><p><b>focus</b>: <a href=\"Specimen-specimen-example-1.html\">Specimen/specimen-example-1</a></p><p><b>for</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> " SMITH"</p><p><b>owner</b>: <a href=\"Organization-organization-example-1.html\">Organization/organization-example-1</a> "Amazing Children's Hospital"</p><h3>Inputs</h3><table class=\"grid\"><tr><td>-</td><td><b>Type</b></td><td><b>Value[x]</b></td></tr><tr><td>*</td><td>Specimen <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></td><td><a href=\"Specimen-specimen-example-1.html\">Specimen/specimen-example-1</a></td></tr></table><h3>Outputs</h3><table class=\"grid\"><tr><td>-</td><td><b>Type</b></td><td><b>Value[x]</b></td></tr><tr><td>*</td><td>DocumentReference <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></td><td><a href=\"DocumentReference-research-document-reference-example-1.html\">DocumentReference/research-document-reference-example-1</a></td></tr></table></div>" + }, + "status" : "completed", + "intent" : "order", + "focus" : { + "reference" : "Specimen/specimen-example-1" + }, + "for" : { + "reference" : "Patient/patient-example-3" + }, + "owner" : { + "reference" : "Organization/organization-example-1" + }, + "input" : [{ + "type" : { + "text" : "Specimen" + }, + "valueReference" : { + "reference" : "Specimen/specimen-example-1" + } + }], + "output" : [{ + "type" : { + "text" : "DocumentReference" + }, + "valueReference" : { + "reference" : "DocumentReference/research-document-reference-example-1" + } + }] } \ No newline at end of file diff --git a/Task-task-example-2.json.html b/Task-task-example-2.json.html index 75a944a7..22645c07 100644 --- a/Task-task-example-2.json.html +++ b/Task-task-example-2.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -356,7 +356,7 @@ <h2 id="root">: task-example-2 - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Task-task-example-2.ttl b/Task-task-example-2.ttl index d97680ee..2985813a 100644 --- a/Task-task-example-2.ttl +++ b/Task-task-example-2.ttl @@ -7,32 +7,32 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/Task/task-example-2> a fhir:Task; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "task-example-2"]; + fhir:Resource.id [ fhir:value "task-example-2"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-specimen-task"; fhir:index 0; fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-specimen-task> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Task</b><a name=\"task-example-2\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Task "task-example-2" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-ncpi-specimen-task.html\">Research Task</a></p></div><p><b>status</b>: completed</p><p><b>intent</b>: order</p><p><b>focus</b>: <a href=\"Specimen-specimen-example-1.html\">Specimen/specimen-example-1</a></p><p><b>for</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> " SMITH"</p><p><b>owner</b>: <a href=\"Organization-organization-example-1.html\">Organization/organization-example-1</a> "Amazing Children's Hospital"</p><h3>Inputs</h3><table class=\"grid\"><tr><td>-</td><td><b>Type</b></td><td><b>Value[x]</b></td></tr><tr><td>*</td><td>Specimen <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></td><td><a href=\"Specimen-specimen-example-1.html\">Specimen/specimen-example-1</a></td></tr></table><h3>Outputs</h3><table class=\"grid\"><tr><td>-</td><td><b>Type</b></td><td><b>Value[x]</b></td></tr><tr><td>*</td><td>DocumentReference <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></td><td><a href=\"DocumentReference-research-document-reference-example-1.html\">DocumentReference/research-document-reference-example-1</a></td></tr></table></div>" - ]; - fhir:Task.status [ fhir:value "completed"]; - fhir:Task.intent [ fhir:value "order"]; + ]; # + fhir:Task.status [ fhir:value "completed"]; # + fhir:Task.intent [ fhir:value "order"]; # fhir:Task.focus [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Specimen/specimen-example-1>; fhir:Reference.reference [ fhir:value "Specimen/specimen-example-1" ] - ]; + ]; # fhir:Task.for [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Patient/patient-example-3>; fhir:Reference.reference [ fhir:value "Patient/patient-example-3" ] - ]; + ]; # fhir:Task.owner [ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Organization/organization-example-1>; fhir:Reference.reference [ fhir:value "Organization/organization-example-1" ] - ]; + ]; # fhir:Task.input [ fhir:index 0; fhir:Task.input.type [ @@ -42,7 +42,7 @@ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/Specimen/specimen-example-1>; fhir:Reference.reference [ fhir:value "Specimen/specimen-example-1" ] ] - ]; + ]; # fhir:Task.output [ fhir:index 0; fhir:Task.output.type [ @@ -52,7 +52,7 @@ fhir:link <https://nih-ncpi.github.io/ncpi-fhir-ig/DocumentReference/research-document-reference-example-1>; fhir:Reference.reference [ fhir:value "DocumentReference/research-document-reference-example-1" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/Task-task-example-2.ttl.html b/Task-task-example-2.ttl.html index 4d652c4f..ff3097c4 100644 --- a/Task-task-example-2.ttl.html +++ b/Task-task-example-2.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -292,42 +292,42 @@ <h2 id="root">: task-example-2 - TTL Representation</h2> a fhir:Task; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/task.html#Task.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "task-example-2"]; + <a href="http://hl7.org/fhir/R4/task.html#Task.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#id">fhir:value</a> "task-example-2"]; # <a href="http://hl7.org/fhir/R4/task.html#Task.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-specimen-task"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-specimen-task> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/task.html#Task.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Task</b><a name=\"task-example-2\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Task &quot;task-example-2&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-ncpi-specimen-task.html\">Research Task</a></p></div><p><b>status</b>: completed</p><p><b>intent</b>: order</p><p><b>focus</b>: <a href=\"Specimen-specimen-example-1.html\">Specimen/specimen-example-1</a></p><p><b>for</b>: <a href=\"Patient-patient-example-3.html\">Patient/patient-example-3</a> &quot; SMITH&quot;</p><p><b>owner</b>: <a href=\"Organization-organization-example-1.html\">Organization/organization-example-1</a> &quot;Amazing Children's Hospital&quot;</p><h3>Inputs</h3><table class=\"grid\"><tr><td>-</td><td><b>Type</b></td><td><b>Value[x]</b></td></tr><tr><td>*</td><td>Specimen <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></td><td><a href=\"Specimen-specimen-example-1.html\">Specimen/specimen-example-1</a></td></tr></table><h3>Outputs</h3><table class=\"grid\"><tr><td>-</td><td><b>Type</b></td><td><b>Value[x]</b></td></tr><tr><td>*</td><td>DocumentReference <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></td><td><a href=\"DocumentReference-research-document-reference-example-1.html\">DocumentReference/research-document-reference-example-1</a></td></tr></table></div>" - ]; - <a href="http://hl7.org/fhir/R4/task.html#Task.status">fhir:Task.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "completed"]; - <a href="http://hl7.org/fhir/R4/task.html#Task.intent">fhir:Task.intent</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "order"]; + ]; # + <a href="http://hl7.org/fhir/R4/task.html#Task.status">fhir:Task.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "completed"]; # + <a href="http://hl7.org/fhir/R4/task.html#Task.intent">fhir:Task.intent</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "order"]; # <a href="http://hl7.org/fhir/R4/task.html#Task.focus">fhir:Task.focus</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Specimen/specimen-example-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/task.html#Task.for">fhir:Task.for</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Patient/patient-example-3" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/task.html#Task.owner">fhir:Task.owner</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Organization/organization-example-1" ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/task.html#Task.input">fhir:Task.input</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/task.html#Task.input.type">fhir:Task.input.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.text">fhir:CodeableConcept.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Specimen" ] ]; <a href="http://hl7.org/fhir/R4/task.html#Task.input.value[x]">fhir:Task.input.valueReference</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Specimen/specimen-example-1" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/task.html#Task.output">fhir:Task.output</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/task.html#Task.output.type">fhir:Task.output.type</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.text">fhir:CodeableConcept.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "DocumentReference" ] ]; <a href="http://hl7.org/fhir/R4/task.html#Task.output.value[x]">fhir:Task.output.valueReference</a> [ <a href="http://hl7.org/fhir/R4/references.html#Reference#Reference.reference">fhir:Reference.reference</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "DocumentReference/research-document-reference-example-1" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -365,7 +365,7 @@ <h2 id="root">: task-example-2 - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/Task-task-example-2.xml.html b/Task-task-example-2.xml.html index 42cd74ad..5e74bc54 100644 --- a/Task-task-example-2.xml.html +++ b/Task-task-example-2.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -352,7 +352,7 @@ <h2 id="root">: task-example-2 - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-condition-inheritance-vs-testing.html b/ValueSet-condition-inheritance-vs-testing.html index cf187ba8..a24a5cc5 100644 --- a/ValueSet-condition-inheritance-vs-testing.html +++ b/ValueSet-condition-inheritance-vs-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">ValueSet: Condition Inheritance Pattern - Testing Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">ValueSet: Condition Inheritance Pattern - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-condition-inheritance-vs.change.history.html b/ValueSet-condition-inheritance-vs.change.history.html index dada589d..bf79ce4f 100644 --- a/ValueSet-condition-inheritance-vs.change.history.html +++ b/ValueSet-condition-inheritance-vs.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ConditionInheritanceModeVS - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-condition-inheritance-vs.html b/ValueSet-condition-inheritance-vs.html index 80017792..914b152b 100644 --- a/ValueSet-condition-inheritance-vs.html +++ b/ValueSet-condition-inheritance-vs.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -280,7 +280,7 @@ <h2 id="root">ValueSet: Condition Inheritance Pattern Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -392,7 +392,7 @@ <h3 id="expansion">Expansion</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-condition-inheritance-vs.json b/ValueSet-condition-inheritance-vs.json index a4a45606..4706b1b7 100644 --- a/ValueSet-condition-inheritance-vs.json +++ b/ValueSet-condition-inheritance-vs.json @@ -1,54 +1,42 @@ -{ - "resourceType": "ValueSet", - "id": "condition-inheritance-vs", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-ConditionInheritanceMode.html\"><code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode</code></a></li></ul></div>" - }, - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/condition-inheritance-vs", - "version": "0.2.0", - "name": "ConditionInheritanceModeVS", - "title": "Condition Inheritance Pattern", - "status": "active", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "Value Set for specific ttransmission patterns of a condition in a pedigree", - "jurisdiction": [ - { - "coding": [ - { - "system": "http://unstats.un.org/unsd/methods/m49/m49.htm", - "code": "001" - } - ] - } - ], - "compose": { - "include": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode" - } - ] - } +{ + "resourceType" : "ValueSet", + "id" : "condition-inheritance-vs", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-ConditionInheritanceMode.html\"><code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode</code></a></li></ul></div>" + }, + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/condition-inheritance-vs", + "version" : "0.2.0", + "name" : "ConditionInheritanceModeVS", + "title" : "Condition Inheritance Pattern", + "status" : "active", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "Value Set for specific ttransmission patterns of a condition in a pedigree", + "jurisdiction" : [{ + "coding" : [{ + "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm", + "code" : "001" + }] + }], + "compose" : { + "include" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode" + }] + } } \ No newline at end of file diff --git a/ValueSet-condition-inheritance-vs.json.html b/ValueSet-condition-inheritance-vs.json.html index 18db48bb..ebe49a5a 100644 --- a/ValueSet-condition-inheritance-vs.json.html +++ b/ValueSet-condition-inheritance-vs.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Condition Inheritance Pattern - JSON Representation</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -297,7 +297,7 @@ <h2 id="root">: Condition Inheritance Pattern - JSON Representation</h2> "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">name</a>" : "ConditionInheritanceModeVS", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">title</a>" : "Condition Inheritance Pattern", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">status</a>" : "active", - "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">contact</a>" : [ { @@ -368,7 +368,7 @@ <h2 id="root">: Condition Inheritance Pattern - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-condition-inheritance-vs.ttl b/ValueSet-condition-inheritance-vs.ttl index 845df9c7..4df40433 100644 --- a/ValueSet-condition-inheritance-vs.ttl +++ b/ValueSet-condition-inheritance-vs.ttl @@ -7,18 +7,18 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/condition-inheritance-vs> a fhir:ValueSet; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "condition-inheritance-vs"]; + fhir:Resource.id [ fhir:value "condition-inheritance-vs"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-ConditionInheritanceMode.html\"><code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode</code></a></li></ul></div>" - ]; - fhir:ValueSet.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/condition-inheritance-vs"]; - fhir:ValueSet.version [ fhir:value "0.2.0"]; - fhir:ValueSet.name [ fhir:value "ConditionInheritanceModeVS"]; - fhir:ValueSet.title [ fhir:value "Condition Inheritance Pattern"]; - fhir:ValueSet.status [ fhir:value "active"]; - fhir:ValueSet.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:ValueSet.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:ValueSet.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/condition-inheritance-vs"]; # + fhir:ValueSet.version [ fhir:value "0.2.0"]; # + fhir:ValueSet.name [ fhir:value "ConditionInheritanceModeVS"]; # + fhir:ValueSet.title [ fhir:value "Condition Inheritance Pattern"]; # + fhir:ValueSet.status [ fhir:value "active"]; # + fhir:ValueSet.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:ValueSet.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:ValueSet.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -36,8 +36,8 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:ValueSet.description [ fhir:value "Value Set for specific ttransmission patterns of a condition in a pedigree"]; + ]; # + fhir:ValueSet.description [ fhir:value "Value Set for specific ttransmission patterns of a condition in a pedigree"]; # fhir:ValueSet.jurisdiction [ fhir:index 0; fhir:CodeableConcept.coding [ @@ -45,13 +45,13 @@ fhir:Coding.system [ fhir:value "http://unstats.un.org/unsd/methods/m49/m49.htm" ]; fhir:Coding.code [ fhir:value "001" ] ] - ]; + ]; # fhir:ValueSet.compose [ fhir:ValueSet.compose.include [ fhir:index 0; fhir:ValueSet.compose.include.system [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ValueSet-condition-inheritance-vs.ttl.html b/ValueSet-condition-inheritance-vs.ttl.html index 4ab4c30b..5b26da09 100644 --- a/ValueSet-condition-inheritance-vs.ttl.html +++ b/ValueSet-condition-inheritance-vs.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Condition Inheritance Pattern - TTL Representation</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,18 +294,18 @@ <h2 id="root">: Condition Inheritance Pattern - TTL Representation</h2> a fhir:ValueSet; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "condition-inheritance-vs"]; + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "condition-inheritance-vs"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-ConditionInheritanceMode.html\"><code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode</code></a></li></ul></div>" - ]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.url">fhir:ValueSet.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/condition-inheritance-vs"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.version">fhir:ValueSet.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">fhir:ValueSet.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ConditionInheritanceModeVS"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">fhir:ValueSet.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Condition Inheritance Pattern"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">fhir:ValueSet.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">fhir:ValueSet.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">fhir:ValueSet.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.url">fhir:ValueSet.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/condition-inheritance-vs"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.version">fhir:ValueSet.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">fhir:ValueSet.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ConditionInheritanceModeVS"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">fhir:ValueSet.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Condition Inheritance Pattern"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">fhir:ValueSet.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">fhir:ValueSet.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">fhir:ValueSet.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">fhir:ValueSet.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -321,20 +321,20 @@ <h2 id="root">: Condition Inheritance Pattern - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.description">fhir:ValueSet.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Value Set for specific ttransmission patterns of a condition in a pedigree"]; + ]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.description">fhir:ValueSet.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Value Set for specific ttransmission patterns of a condition in a pedigree"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.jurisdiction">fhir:ValueSet.jurisdiction</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#CodeableConcept#CodeableConcept.coding">fhir:CodeableConcept.coding</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.system">fhir:Coding.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://unstats.un.org/unsd/methods/m49/m49.htm" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#Coding#Coding.code">fhir:Coding.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "001" ] ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose">fhir:ValueSet.compose</a> [ <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include">fhir:ValueSet.compose.include</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include.system">fhir:ValueSet.compose.include.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -372,7 +372,7 @@ <h2 id="root">: Condition Inheritance Pattern - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-condition-inheritance-vs.xlsx b/ValueSet-condition-inheritance-vs.xlsx index 7d79f62f..a136609d 100644 Binary files a/ValueSet-condition-inheritance-vs.xlsx and b/ValueSet-condition-inheritance-vs.xlsx differ diff --git a/ValueSet-condition-inheritance-vs.xml b/ValueSet-condition-inheritance-vs.xml index b69d22cc..cd544058 100644 --- a/ValueSet-condition-inheritance-vs.xml +++ b/ValueSet-condition-inheritance-vs.xml @@ -10,7 +10,7 @@ <name value="ConditionInheritanceModeVS"/> <title value="Condition Inheritance Pattern"/> <status value="active"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/ValueSet-condition-inheritance-vs.xml.html b/ValueSet-condition-inheritance-vs.xml.html index 230d7a80..28bbe7b6 100644 --- a/ValueSet-condition-inheritance-vs.xml.html +++ b/ValueSet-condition-inheritance-vs.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Condition Inheritance Pattern - XML Representation</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: Condition Inheritance Pattern - XML Representation</h2> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="ConditionInheritanceModeVS"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Condition Inheritance Pattern"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="active"/> - <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -359,7 +359,7 @@ <h2 id="root">: Condition Inheritance Pattern - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-datatable-mappings-valueset-1-testing.html b/ValueSet-datatable-mappings-valueset-1-testing.html index dffeb3c0..8883d443 100644 --- a/ValueSet-datatable-mappings-valueset-1-testing.html +++ b/ValueSet-datatable-mappings-valueset-1-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">ValueSet: Harmonized ValueSet for data table - Testing Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">ValueSet: Harmonized ValueSet for data table - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-datatable-mappings-valueset-1.change.history.html b/ValueSet-datatable-mappings-valueset-1.change.history.html index abf7a472..734b748d 100644 --- a/ValueSet-datatable-mappings-valueset-1.change.history.html +++ b/ValueSet-datatable-mappings-valueset-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ExampleStudyTableMappingsVS1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-datatable-mappings-valueset-1.html b/ValueSet-datatable-mappings-valueset-1.html index 85702654..624a8e6a 100644 --- a/ValueSet-datatable-mappings-valueset-1.html +++ b/ValueSet-datatable-mappings-valueset-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -280,7 +280,7 @@ <h2 id="root">ValueSet: Harmonized ValueSet for data table Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -391,7 +391,7 @@ <h3 id="expansion">Expansion</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-datatable-mappings-valueset-1.json b/ValueSet-datatable-mappings-valueset-1.json index 8f7066b8..895a2a76 100644 --- a/ValueSet-datatable-mappings-valueset-1.json +++ b/ValueSet-datatable-mappings-valueset-1.json @@ -1,97 +1,81 @@ -{ - "resourceType": "ValueSet", - "id": "datatable-mappings-valueset-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This value set includes codes based on the following rules:</p><ul><li>Include these codes as defined in <code>https://uts.nlm.nih.gov/uts/umls</code><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C2348584</td><td>Subject Unique Identifier</td></tr><tr><td>C0079399</td><td>Gender</td></tr><tr><td>C168843</td><td>Age in Days at Enrollment</td></tr><tr><td>C1305855</td><td>Body mass index</td></tr><tr><td>C0872128</td><td>case control</td></tr></table></li><li>Include these codes as defined in <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"https://loinc.org/LP35925-4/\">LP35925-4</a></td><td>Body mass index (BMI)</td></tr></table></li><li>Include these codes as defined in <a href=\"CodeSystem-hpo.html\"><code>http://purl.obolibrary.org/obo/hp.owl</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"CodeSystem-hpo.html#hpo-HP.580010772\">HP:0010772</a></td><td>Anomalous pulmonary venous return</td></tr></table></li><li>Include these codes as defined in <a href=\"CodeSystem-mondo.html\"><code>http://purl.obolibrary.org/obo/mondo.owl</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"CodeSystem-mondo.html#mondo-0017705\">0017705</a></td><td>congenital pulmonary venous return anomaly</td></tr><tr><td><a href=\"CodeSystem-mondo.html#mondo-0007130\">0007130</a></td><td>congenital total pulmonary venous return anomaly</td></tr></table></li></ul></div>" - }, - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1", - "version": "0.2.0", - "name": "ExampleStudyTableMappingsVS1", - "title": "Harmonized ValueSet for data table", - "status": "active", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "Public codes mapped from example dataset\n\nThe codes used below were chosen purely for example's sake and are in no way an endorsement or suggestion for terms that should be used in a real data-dictionary.", - "compose": { - "include": [ - { - "system": "https://uts.nlm.nih.gov/uts/umls", - "concept": [ - { - "code": "C2348584", - "display": "Subject Unique Identifier" - }, - { - "code": "C0079399", - "display": "Gender" - }, - { - "code": "C168843", - "display": "Age in Days at Enrollment" - }, - { - "code": "C1305855", - "display": "Body mass index" - }, - { - "code": "C0872128", - "display": "case control" - } - ] - }, - { - "system": "http://loinc.org", - "concept": [ - { - "code": "LP35925-4", - "display": "Body mass index (BMI)" - } - ] - }, - { - "system": "http://purl.obolibrary.org/obo/hp.owl", - "concept": [ - { - "code": "HP:0010772", - "display": "Anomalous pulmonary venous return" - } - ] - }, - { - "system": "http://purl.obolibrary.org/obo/mondo.owl", - "concept": [ - { - "code": "0017705", - "display": "congenital pulmonary venous return anomaly" - }, - { - "code": "0007130", - "display": "congenital total pulmonary venous return anomaly" - } - ] - } - ] - } +{ + "resourceType" : "ValueSet", + "id" : "datatable-mappings-valueset-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This value set includes codes based on the following rules:</p><ul><li>Include these codes as defined in <code>https://uts.nlm.nih.gov/uts/umls</code><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C2348584</td><td>Subject Unique Identifier</td></tr><tr><td>C0079399</td><td>Gender</td></tr><tr><td>C168843</td><td>Age in Days at Enrollment</td></tr><tr><td>C1305855</td><td>Body mass index</td></tr><tr><td>C0872128</td><td>case control</td></tr></table></li><li>Include these codes as defined in <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"https://loinc.org/LP35925-4/\">LP35925-4</a></td><td>Body mass index (BMI)</td></tr></table></li><li>Include these codes as defined in <a href=\"CodeSystem-hpo.html\"><code>http://purl.obolibrary.org/obo/hp.owl</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"CodeSystem-hpo.html#hpo-HP.580010772\">HP:0010772</a></td><td>Anomalous pulmonary venous return</td></tr></table></li><li>Include these codes as defined in <a href=\"CodeSystem-mondo.html\"><code>http://purl.obolibrary.org/obo/mondo.owl</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"CodeSystem-mondo.html#mondo-0017705\">0017705</a></td><td>congenital pulmonary venous return anomaly</td></tr><tr><td><a href=\"CodeSystem-mondo.html#mondo-0007130\">0007130</a></td><td>congenital total pulmonary venous return anomaly</td></tr></table></li></ul></div>" + }, + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1", + "version" : "0.2.0", + "name" : "ExampleStudyTableMappingsVS1", + "title" : "Harmonized ValueSet for data table", + "status" : "active", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "Public codes mapped from example dataset\n\nThe codes used below were chosen purely for example's sake and are in no way an endorsement or suggestion for terms that should be used in a real data-dictionary.", + "compose" : { + "include" : [{ + "system" : "https://uts.nlm.nih.gov/uts/umls", + "concept" : [{ + "code" : "C2348584", + "display" : "Subject Unique Identifier" + }, + { + "code" : "C0079399", + "display" : "Gender" + }, + { + "code" : "C168843", + "display" : "Age in Days at Enrollment" + }, + { + "code" : "C1305855", + "display" : "Body mass index" + }, + { + "code" : "C0872128", + "display" : "case control" + }] + }, + { + "system" : "http://loinc.org", + "concept" : [{ + "code" : "LP35925-4", + "display" : "Body mass index (BMI)" + }] + }, + { + "system" : "http://purl.obolibrary.org/obo/hp.owl", + "concept" : [{ + "code" : "HP:0010772", + "display" : "Anomalous pulmonary venous return" + }] + }, + { + "system" : "http://purl.obolibrary.org/obo/mondo.owl", + "concept" : [{ + "code" : "0017705", + "display" : "congenital pulmonary venous return anomaly" + }, + { + "code" : "0007130", + "display" : "congenital total pulmonary venous return anomaly" + }] + }] + } } \ No newline at end of file diff --git a/ValueSet-datatable-mappings-valueset-1.json.html b/ValueSet-datatable-mappings-valueset-1.json.html index c40b649f..7cda854f 100644 --- a/ValueSet-datatable-mappings-valueset-1.json.html +++ b/ValueSet-datatable-mappings-valueset-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Harmonized ValueSet for data table - JSON Representation</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -297,7 +297,7 @@ <h2 id="root">: Harmonized ValueSet for data table - JSON Representation</h2> "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">name</a>" : "ExampleStudyTableMappingsVS1", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">title</a>" : "Harmonized ValueSet for data table", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">status</a>" : "active", - "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">contact</a>" : [ { @@ -411,7 +411,7 @@ <h2 id="root">: Harmonized ValueSet for data table - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-datatable-mappings-valueset-1.ttl b/ValueSet-datatable-mappings-valueset-1.ttl index f83ce6dc..a54ad5c4 100644 --- a/ValueSet-datatable-mappings-valueset-1.ttl +++ b/ValueSet-datatable-mappings-valueset-1.ttl @@ -7,18 +7,18 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1> a fhir:ValueSet; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "datatable-mappings-valueset-1"]; + fhir:Resource.id [ fhir:value "datatable-mappings-valueset-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This value set includes codes based on the following rules:</p><ul><li>Include these codes as defined in <code>https://uts.nlm.nih.gov/uts/umls</code><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C2348584</td><td>Subject Unique Identifier</td></tr><tr><td>C0079399</td><td>Gender</td></tr><tr><td>C168843</td><td>Age in Days at Enrollment</td></tr><tr><td>C1305855</td><td>Body mass index</td></tr><tr><td>C0872128</td><td>case control</td></tr></table></li><li>Include these codes as defined in <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"https://loinc.org/LP35925-4/\">LP35925-4</a></td><td>Body mass index (BMI)</td></tr></table></li><li>Include these codes as defined in <a href=\"CodeSystem-hpo.html\"><code>http://purl.obolibrary.org/obo/hp.owl</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"CodeSystem-hpo.html#hpo-HP.580010772\">HP:0010772</a></td><td>Anomalous pulmonary venous return</td></tr></table></li><li>Include these codes as defined in <a href=\"CodeSystem-mondo.html\"><code>http://purl.obolibrary.org/obo/mondo.owl</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"CodeSystem-mondo.html#mondo-0017705\">0017705</a></td><td>congenital pulmonary venous return anomaly</td></tr><tr><td><a href=\"CodeSystem-mondo.html#mondo-0007130\">0007130</a></td><td>congenital total pulmonary venous return anomaly</td></tr></table></li></ul></div>" - ]; - fhir:ValueSet.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1"]; - fhir:ValueSet.version [ fhir:value "0.2.0"]; - fhir:ValueSet.name [ fhir:value "ExampleStudyTableMappingsVS1"]; - fhir:ValueSet.title [ fhir:value "Harmonized ValueSet for data table"]; - fhir:ValueSet.status [ fhir:value "active"]; - fhir:ValueSet.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:ValueSet.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:ValueSet.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1"]; # + fhir:ValueSet.version [ fhir:value "0.2.0"]; # + fhir:ValueSet.name [ fhir:value "ExampleStudyTableMappingsVS1"]; # + fhir:ValueSet.title [ fhir:value "Harmonized ValueSet for data table"]; # + fhir:ValueSet.status [ fhir:value "active"]; # + fhir:ValueSet.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:ValueSet.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:ValueSet.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -36,8 +36,8 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:ValueSet.description [ fhir:value "Public codes mapped from example dataset\n\nThe codes used below were chosen purely for example's sake and are in no way an endorsement or suggestion for terms that should be used in a real data-dictionary."]; + ]; # + fhir:ValueSet.description [ fhir:value "Public codes mapped from example dataset\n\nThe codes used below were chosen purely for example's sake and are in no way an endorsement or suggestion for terms that should be used in a real data-dictionary."]; # fhir:ValueSet.compose [ fhir:ValueSet.compose.include [ fhir:index 0; @@ -92,7 +92,7 @@ fhir:ValueSet.compose.include.concept.display [ fhir:value "congenital total pulmonary venous return anomaly" ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ValueSet-datatable-mappings-valueset-1.ttl.html b/ValueSet-datatable-mappings-valueset-1.ttl.html index b2c6fac1..56804dd8 100644 --- a/ValueSet-datatable-mappings-valueset-1.ttl.html +++ b/ValueSet-datatable-mappings-valueset-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Harmonized ValueSet for data table - TTL Representation</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,18 +294,18 @@ <h2 id="root">: Harmonized ValueSet for data table - TTL Representation</h2> a fhir:ValueSet; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "datatable-mappings-valueset-1"]; + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "datatable-mappings-valueset-1"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This value set includes codes based on the following rules:</p><ul><li>Include these codes as defined in <code>https://uts.nlm.nih.gov/uts/umls</code><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C2348584</td><td>Subject Unique Identifier</td></tr><tr><td>C0079399</td><td>Gender</td></tr><tr><td>C168843</td><td>Age in Days at Enrollment</td></tr><tr><td>C1305855</td><td>Body mass index</td></tr><tr><td>C0872128</td><td>case control</td></tr></table></li><li>Include these codes as defined in <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"https://loinc.org/LP35925-4/\">LP35925-4</a></td><td>Body mass index (BMI)</td></tr></table></li><li>Include these codes as defined in <a href=\"CodeSystem-hpo.html\"><code>http://purl.obolibrary.org/obo/hp.owl</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"CodeSystem-hpo.html#hpo-HP.580010772\">HP:0010772</a></td><td>Anomalous pulmonary venous return</td></tr></table></li><li>Include these codes as defined in <a href=\"CodeSystem-mondo.html\"><code>http://purl.obolibrary.org/obo/mondo.owl</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"CodeSystem-mondo.html#mondo-0017705\">0017705</a></td><td>congenital pulmonary venous return anomaly</td></tr><tr><td><a href=\"CodeSystem-mondo.html#mondo-0007130\">0007130</a></td><td>congenital total pulmonary venous return anomaly</td></tr></table></li></ul></div>" - ]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.url">fhir:ValueSet.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.version">fhir:ValueSet.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">fhir:ValueSet.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ExampleStudyTableMappingsVS1"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">fhir:ValueSet.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Harmonized ValueSet for data table"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">fhir:ValueSet.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">fhir:ValueSet.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">fhir:ValueSet.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.url">fhir:ValueSet.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.version">fhir:ValueSet.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">fhir:ValueSet.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ExampleStudyTableMappingsVS1"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">fhir:ValueSet.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Harmonized ValueSet for data table"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">fhir:ValueSet.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">fhir:ValueSet.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">fhir:ValueSet.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">fhir:ValueSet.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -321,8 +321,8 @@ <h2 id="root">: Harmonized ValueSet for data table - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.description">fhir:ValueSet.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Public codes mapped from example dataset\n\nThe codes used below were chosen purely for example's sake and are in no way an endorsement or suggestion for terms that should be used in a real data-dictionary."]; + ]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.description">fhir:ValueSet.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Public codes mapped from example dataset\n\nThe codes used below were chosen purely for example's sake and are in no way an endorsement or suggestion for terms that should be used in a real data-dictionary."]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose">fhir:ValueSet.compose</a> [ <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include">fhir:ValueSet.compose.include</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -364,7 +364,7 @@ <h2 id="root">: Harmonized ValueSet for data table - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include.concept.code">fhir:ValueSet.compose.include.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "0007130" ]; <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include.concept.display">fhir:ValueSet.compose.include.concept.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "congenital total pulmonary venous return anomaly" ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -402,7 +402,7 @@ <h2 id="root">: Harmonized ValueSet for data table - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-datatable-mappings-valueset-1.xlsx b/ValueSet-datatable-mappings-valueset-1.xlsx index 48502727..ea0f9049 100644 Binary files a/ValueSet-datatable-mappings-valueset-1.xlsx and b/ValueSet-datatable-mappings-valueset-1.xlsx differ diff --git a/ValueSet-datatable-mappings-valueset-1.xml b/ValueSet-datatable-mappings-valueset-1.xml index 685efdc8..14234123 100644 --- a/ValueSet-datatable-mappings-valueset-1.xml +++ b/ValueSet-datatable-mappings-valueset-1.xml @@ -10,7 +10,7 @@ <name value="ExampleStudyTableMappingsVS1"/> <title value="Harmonized ValueSet for data table"/> <status value="active"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/ValueSet-datatable-mappings-valueset-1.xml.html b/ValueSet-datatable-mappings-valueset-1.xml.html index 7a9a372d..303a6596 100644 --- a/ValueSet-datatable-mappings-valueset-1.xml.html +++ b/ValueSet-datatable-mappings-valueset-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Harmonized ValueSet for data table - XML Representation</h2> Active - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: Harmonized ValueSet for data table - XML Representation</h2> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="ExampleStudyTableMappingsVS1"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Harmonized ValueSet for data table"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="active"/> - <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -399,7 +399,7 @@ <h2 id="root">: Harmonized ValueSet for data table - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-datatable-valueset-1-testing.html b/ValueSet-datatable-valueset-1-testing.html index 1e1dd754..49a968c3 100644 --- a/ValueSet-datatable-valueset-1-testing.html +++ b/ValueSet-datatable-valueset-1-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">ValueSet: Table ValueSet - Testing Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">ValueSet: Table ValueSet - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-datatable-valueset-1.change.history.html b/ValueSet-datatable-valueset-1.change.history.html index 8f88659b..ae8419a4 100644 --- a/ValueSet-datatable-valueset-1.change.history.html +++ b/ValueSet-datatable-valueset-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ExampleStudyTableVS1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-datatable-valueset-1.html b/ValueSet-datatable-valueset-1.html index 00815014..5ccaa051 100644 --- a/ValueSet-datatable-valueset-1.html +++ b/ValueSet-datatable-valueset-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -280,7 +280,7 @@ <h2 id="root">ValueSet: Table ValueSet Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -323,7 +323,7 @@ <h3>Logical Definition (CLD)</h3> <a name="expansion"> </a> <h3 id="expansion">Expansion</h3> - <div><p>This value set contains 5 concepts</p><p style="border: black 1px dotted; background-color: #EEEEEE; padding: 8px; margin-bottom: 8px">Expansion based on <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables) v0.2.0 (CodeSystem)</a></p><table class="codes"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>System</b></td><td><b>Display</b></td><td><b><a href="ValueSet-datatable-mappings-valueset-1.html">ConceptMap[http://example.org/my-dataset/fhir/conceptmap/data-to-public]</a></b></td></tr><tr><td style="white-space:nowrap"><a name="https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-subjectid"> </a>  <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-subjectid">subjectid</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Subject's Unique Identifier</td><td><span title="EQUIVALENT">~</span>C2348584</td></tr><tr><td style="white-space:nowrap"><a name="https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-gender"> </a>  <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-gender">gender</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Gender</td><td><span title="EQUIVALENT">~</span>C0079399</td></tr><tr><td style="white-space:nowrap"><a name="https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-age-at-enrollment"> </a>  <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-age_at_enrollment">age_at_enrollment</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Subject's Age at Enrollment in days</td><td><span title="EQUIVALENT">~</span>C168843</td></tr><tr><td style="white-space:nowrap"><a name="https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-bmi"> </a>  <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-bmi">bmi</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Subject's BMI, Measured at Enrollment</td><td><span title="SOURCEISNARROWERTHANTARGET"><</span>C1305855<br/><span title="SOURCEISNARROWERTHANTARGET"><</span><a href="https://loinc.org/LP35925-4/">LP35925-4</a></td></tr><tr><td style="white-space:nowrap"><a name="https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-status"> </a>  <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-status">status</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Subject's status (Case or Control)</td><td><a name="l619">​</a><span title="EQUIVALENT">~</span>C0872128<br/><span title="EQUIVALENT">~</span><a href="CodeSystem-hpo.html#hpo-HP.580010772">HP:0010772</a><br/><span title="EQUIVALENT">~</span><a href="CodeSystem-mondo.html#mondo-MONDO.580017705">MONDO:0017705</a><br/><span title="EQUIVALENT">~</span><a href="CodeSystem-mondo.html#mondo-MONDO.580007130">MONDO:0007130</a></td></tr></table></div> + <div><p>This value set contains 5 concepts</p><p style="border: black 1px dotted; background-color: #EEEEEE; padding: 8px; margin-bottom: 8px">Expansion based on <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">Datatable CodeSystem (lists all variables) v0.2.0 (CodeSystem)</a></p><table class="codes"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>System</b></td><td><b>Display</b></td><td><b><a href="ValueSet-datatable-mappings-valueset-1.html">ConceptMap[http://example.org/my-dataset/fhir/conceptmap/data-to-public|0.2.0]</a></b></td></tr><tr><td style="white-space:nowrap"><a name="https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-subjectid"> </a>  <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-subjectid">subjectid</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Subject's Unique Identifier</td><td><span title="EQUIVALENT">~</span>C2348584</td></tr><tr><td style="white-space:nowrap"><a name="https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-gender"> </a>  <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-gender">gender</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Gender</td><td><span title="EQUIVALENT">~</span>C0079399</td></tr><tr><td style="white-space:nowrap"><a name="https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-age-at-enrollment"> </a>  <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-age_at_enrollment">age_at_enrollment</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Subject's Age at Enrollment in days</td><td><span title="EQUIVALENT">~</span>C168843</td></tr><tr><td style="white-space:nowrap"><a name="https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-bmi"> </a>  <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-bmi">bmi</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Subject's BMI, Measured at Enrollment</td><td><span title="SOURCEISNARROWERTHANTARGET"><</span>C1305855<br/><span title="SOURCEISNARROWERTHANTARGET"><</span><a href="https://loinc.org/LP35925-4/">LP35925-4</a></td></tr><tr><td style="white-space:nowrap"><a name="https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-status"> </a>  <a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-status">status</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Subject's status (Case or Control)</td><td><a name="l619">​</a><span title="EQUIVALENT">~</span>C0872128<br/><span title="EQUIVALENT">~</span><a href="CodeSystem-hpo.html#hpo-HP.580010772">HP:0010772</a><br/><span title="EQUIVALENT">~</span><a href="CodeSystem-mondo.html#mondo-MONDO.580017705">MONDO:0017705</a><br/><span title="EQUIVALENT">~</span><a href="CodeSystem-mondo.html#mondo-MONDO.580007130">MONDO:0007130</a></td></tr></table></div> <hr/> <p> @@ -388,7 +388,7 @@ <h3 id="expansion">Expansion</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-datatable-valueset-1.json b/ValueSet-datatable-valueset-1.json index edd817ef..47f754c3 100644 --- a/ValueSet-datatable-valueset-1.json +++ b/ValueSet-datatable-valueset-1.json @@ -1,44 +1,36 @@ -{ - "resourceType": "ValueSet", - "id": "datatable-valueset-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\"><code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</code></a></li></ul></div>" - }, - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1", - "version": "0.2.0", - "name": "ExampleStudyTableVS1", - "title": "Table ValueSet", - "status": "draft", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "Example Data Table with 4 variables", - "compose": { - "include": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1" - } - ] - } +{ + "resourceType" : "ValueSet", + "id" : "datatable-valueset-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\"><code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</code></a></li></ul></div>" + }, + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1", + "version" : "0.2.0", + "name" : "ExampleStudyTableVS1", + "title" : "Table ValueSet", + "status" : "draft", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "Example Data Table with 4 variables", + "compose" : { + "include" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1" + }] + } } \ No newline at end of file diff --git a/ValueSet-datatable-valueset-1.json.html b/ValueSet-datatable-valueset-1.json.html index 12f994d5..01bd3e0c 100644 --- a/ValueSet-datatable-valueset-1.json.html +++ b/ValueSet-datatable-valueset-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Table ValueSet - JSON Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -297,7 +297,7 @@ <h2 id="root">: Table ValueSet - JSON Representation</h2> "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">name</a>" : "ExampleStudyTableVS1", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">title</a>" : "Table ValueSet", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">status</a>" : "draft", - "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">contact</a>" : [ { @@ -358,7 +358,7 @@ <h2 id="root">: Table ValueSet - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-datatable-valueset-1.ttl b/ValueSet-datatable-valueset-1.ttl index 1b2d5967..5bb81ae3 100644 --- a/ValueSet-datatable-valueset-1.ttl +++ b/ValueSet-datatable-valueset-1.ttl @@ -7,18 +7,18 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1> a fhir:ValueSet; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "datatable-valueset-1"]; + fhir:Resource.id [ fhir:value "datatable-valueset-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\"><code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</code></a></li></ul></div>" - ]; - fhir:ValueSet.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1"]; - fhir:ValueSet.version [ fhir:value "0.2.0"]; - fhir:ValueSet.name [ fhir:value "ExampleStudyTableVS1"]; - fhir:ValueSet.title [ fhir:value "Table ValueSet"]; - fhir:ValueSet.status [ fhir:value "draft"]; - fhir:ValueSet.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:ValueSet.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:ValueSet.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1"]; # + fhir:ValueSet.version [ fhir:value "0.2.0"]; # + fhir:ValueSet.name [ fhir:value "ExampleStudyTableVS1"]; # + fhir:ValueSet.title [ fhir:value "Table ValueSet"]; # + fhir:ValueSet.status [ fhir:value "draft"]; # + fhir:ValueSet.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:ValueSet.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:ValueSet.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -36,14 +36,14 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:ValueSet.description [ fhir:value "Example Data Table with 4 variables"]; + ]; # + fhir:ValueSet.description [ fhir:value "Example Data Table with 4 variables"]; # fhir:ValueSet.compose [ fhir:ValueSet.compose.include [ fhir:index 0; fhir:ValueSet.compose.include.system [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ValueSet-datatable-valueset-1.ttl.html b/ValueSet-datatable-valueset-1.ttl.html index 131a9636..cedc123b 100644 --- a/ValueSet-datatable-valueset-1.ttl.html +++ b/ValueSet-datatable-valueset-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Table ValueSet - TTL Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,18 +294,18 @@ <h2 id="root">: Table ValueSet - TTL Representation</h2> a fhir:ValueSet; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "datatable-valueset-1"]; + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "datatable-valueset-1"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\"><code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</code></a></li></ul></div>" - ]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.url">fhir:ValueSet.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.version">fhir:ValueSet.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">fhir:ValueSet.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ExampleStudyTableVS1"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">fhir:ValueSet.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Table ValueSet"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">fhir:ValueSet.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">fhir:ValueSet.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">fhir:ValueSet.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.url">fhir:ValueSet.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.version">fhir:ValueSet.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">fhir:ValueSet.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ExampleStudyTableVS1"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">fhir:ValueSet.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Table ValueSet"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">fhir:ValueSet.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">fhir:ValueSet.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">fhir:ValueSet.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">fhir:ValueSet.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -321,13 +321,13 @@ <h2 id="root">: Table ValueSet - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.description">fhir:ValueSet.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Example Data Table with 4 variables"]; + ]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.description">fhir:ValueSet.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Example Data Table with 4 variables"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose">fhir:ValueSet.compose</a> [ <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include">fhir:ValueSet.compose.include</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include.system">fhir:ValueSet.compose.include.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -365,7 +365,7 @@ <h2 id="root">: Table ValueSet - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-datatable-valueset-1.xlsx b/ValueSet-datatable-valueset-1.xlsx index b5c364c9..a1b185ce 100644 Binary files a/ValueSet-datatable-valueset-1.xlsx and b/ValueSet-datatable-valueset-1.xlsx differ diff --git a/ValueSet-datatable-valueset-1.xml b/ValueSet-datatable-valueset-1.xml index 3b0095d7..9a0406ba 100644 --- a/ValueSet-datatable-valueset-1.xml +++ b/ValueSet-datatable-valueset-1.xml @@ -10,7 +10,7 @@ <name value="ExampleStudyTableVS1"/> <title value="Table ValueSet"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/ValueSet-datatable-valueset-1.xml.html b/ValueSet-datatable-valueset-1.xml.html index 6a5a9c66..cce90b1d 100644 --- a/ValueSet-datatable-valueset-1.xml.html +++ b/ValueSet-datatable-valueset-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Table ValueSet - XML Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: Table ValueSet - XML Representation</h2> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="ExampleStudyTableVS1"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Table ValueSet"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> - <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -352,7 +352,7 @@ <h2 id="root">: Table ValueSet - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-disease-codes-testing.html b/ValueSet-disease-codes-testing.html index 49d3957f..c02ecc33 100644 --- a/ValueSet-disease-codes-testing.html +++ b/ValueSet-disease-codes-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">ValueSet: Disease Codes - Testing Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">ValueSet: Disease Codes - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-disease-codes.change.history.html b/ValueSet-disease-codes.change.history.html index 1c17e559..1f130c48 100644 --- a/ValueSet-disease-codes.change.history.html +++ b/ValueSet-disease-codes.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: DiseaseCodes - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-disease-codes.html b/ValueSet-disease-codes.html index 130f8a2f..c91d8414 100644 --- a/ValueSet-disease-codes.html +++ b/ValueSet-disease-codes.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -280,7 +280,7 @@ <h2 id="root">ValueSet: Disease Codes Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -390,7 +390,7 @@ <h3 id="expansion">Expansion</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-disease-codes.json b/ValueSet-disease-codes.json index 7455d315..f73e6a67 100644 --- a/ValueSet-disease-codes.json +++ b/ValueSet-disease-codes.json @@ -1,51 +1,43 @@ -{ - "resourceType": "ValueSet", - "id": "disease-codes", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This value set includes codes based on the following rules:</p><ul><li>Include all codes defined in <a href=\"CodeSystem-omim.html\"><code>https://omim.org/</code></a></li><li>Include all codes defined in <a href=\"CodeSystem-mondo.html\"><code>http://purl.obolibrary.org/obo/mondo.owl</code></a></li><li>Include all codes defined in <a href=\"CodeSystem-ncit.html\"><code>http://purl.obolibrary.org/obo/ncit.owl</code></a></li></ul></div>" - }, - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/disease-codes", - "version": "0.2.0", - "name": "DiseaseCodes", - "title": "Disease Codes", - "status": "draft", - "experimental": false, - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "This value set includes all codes from this FHIR server's representation of OMIM, Mondo and NICt CodeSystems.", - "compose": { - "include": [ - { - "system": "https://omim.org/" - }, - { - "system": "http://purl.obolibrary.org/obo/mondo.owl" - }, - { - "system": "http://purl.obolibrary.org/obo/ncit.owl" - } - ] - } +{ + "resourceType" : "ValueSet", + "id" : "disease-codes", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This value set includes codes based on the following rules:</p><ul><li>Include all codes defined in <a href=\"CodeSystem-omim.html\"><code>https://omim.org/</code></a></li><li>Include all codes defined in <a href=\"CodeSystem-mondo.html\"><code>http://purl.obolibrary.org/obo/mondo.owl</code></a></li><li>Include all codes defined in <a href=\"CodeSystem-ncit.html\"><code>http://purl.obolibrary.org/obo/ncit.owl</code></a></li></ul></div>" + }, + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/disease-codes", + "version" : "0.2.0", + "name" : "DiseaseCodes", + "title" : "Disease Codes", + "status" : "draft", + "experimental" : false, + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "This value set includes all codes from this FHIR server's representation of OMIM, Mondo and NICt CodeSystems.", + "compose" : { + "include" : [{ + "system" : "https://omim.org/" + }, + { + "system" : "http://purl.obolibrary.org/obo/mondo.owl" + }, + { + "system" : "http://purl.obolibrary.org/obo/ncit.owl" + }] + } } \ No newline at end of file diff --git a/ValueSet-disease-codes.json.html b/ValueSet-disease-codes.json.html index ac5c1818..530f0c69 100644 --- a/ValueSet-disease-codes.json.html +++ b/ValueSet-disease-codes.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Disease Codes - JSON Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: Disease Codes - JSON Representation</h2> "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">title</a>" : "Disease Codes", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">status</a>" : "draft", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.experimental">experimental</a>" : false, - "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">contact</a>" : [ { @@ -365,7 +365,7 @@ <h2 id="root">: Disease Codes - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-disease-codes.ttl b/ValueSet-disease-codes.ttl index f0dfcc81..ac0e47a7 100644 --- a/ValueSet-disease-codes.ttl +++ b/ValueSet-disease-codes.ttl @@ -7,19 +7,19 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/disease-codes> a fhir:ValueSet; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "disease-codes"]; + fhir:Resource.id [ fhir:value "disease-codes"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This value set includes codes based on the following rules:</p><ul><li>Include all codes defined in <a href=\"CodeSystem-omim.html\"><code>https://omim.org/</code></a></li><li>Include all codes defined in <a href=\"CodeSystem-mondo.html\"><code>http://purl.obolibrary.org/obo/mondo.owl</code></a></li><li>Include all codes defined in <a href=\"CodeSystem-ncit.html\"><code>http://purl.obolibrary.org/obo/ncit.owl</code></a></li></ul></div>" - ]; - fhir:ValueSet.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/disease-codes"]; - fhir:ValueSet.version [ fhir:value "0.2.0"]; - fhir:ValueSet.name [ fhir:value "DiseaseCodes"]; - fhir:ValueSet.title [ fhir:value "Disease Codes"]; - fhir:ValueSet.status [ fhir:value "draft"]; - fhir:ValueSet.experimental [ fhir:value "false"^^xsd:boolean]; - fhir:ValueSet.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:ValueSet.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:ValueSet.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/disease-codes"]; # + fhir:ValueSet.version [ fhir:value "0.2.0"]; # + fhir:ValueSet.name [ fhir:value "DiseaseCodes"]; # + fhir:ValueSet.title [ fhir:value "Disease Codes"]; # + fhir:ValueSet.status [ fhir:value "draft"]; # + fhir:ValueSet.experimental [ fhir:value "false"^^xsd:boolean]; # + fhir:ValueSet.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:ValueSet.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:ValueSet.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -37,8 +37,8 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:ValueSet.description [ fhir:value "This value set includes all codes from this FHIR server's representation of OMIM, Mondo and NICt CodeSystems."]; + ]; # + fhir:ValueSet.description [ fhir:value "This value set includes all codes from this FHIR server's representation of OMIM, Mondo and NICt CodeSystems."]; # fhir:ValueSet.compose [ fhir:ValueSet.compose.include [ fhir:index 0; @@ -50,7 +50,7 @@ fhir:index 2; fhir:ValueSet.compose.include.system [ fhir:value "http://purl.obolibrary.org/obo/ncit.owl" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ValueSet-disease-codes.ttl.html b/ValueSet-disease-codes.ttl.html index a08c2bf3..02b73d90 100644 --- a/ValueSet-disease-codes.ttl.html +++ b/ValueSet-disease-codes.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Disease Codes - TTL Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,19 +294,19 @@ <h2 id="root">: Disease Codes - TTL Representation</h2> a fhir:ValueSet; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "disease-codes"]; + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "disease-codes"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This value set includes codes based on the following rules:</p><ul><li>Include all codes defined in <a href=\"CodeSystem-omim.html\"><code>https://omim.org/</code></a></li><li>Include all codes defined in <a href=\"CodeSystem-mondo.html\"><code>http://purl.obolibrary.org/obo/mondo.owl</code></a></li><li>Include all codes defined in <a href=\"CodeSystem-ncit.html\"><code>http://purl.obolibrary.org/obo/ncit.owl</code></a></li></ul></div>" - ]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.url">fhir:ValueSet.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/disease-codes"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.version">fhir:ValueSet.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">fhir:ValueSet.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "DiseaseCodes"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">fhir:ValueSet.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Disease Codes"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">fhir:ValueSet.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.experimental">fhir:ValueSet.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">fhir:ValueSet.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">fhir:ValueSet.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.url">fhir:ValueSet.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/disease-codes"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.version">fhir:ValueSet.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">fhir:ValueSet.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "DiseaseCodes"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">fhir:ValueSet.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Disease Codes"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">fhir:ValueSet.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.experimental">fhir:ValueSet.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">fhir:ValueSet.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">fhir:ValueSet.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">fhir:ValueSet.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -322,8 +322,8 @@ <h2 id="root">: Disease Codes - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.description">fhir:ValueSet.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "This value set includes all codes from this FHIR server's representation of OMIM, Mondo and NICt CodeSystems."]; + ]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.description">fhir:ValueSet.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "This value set includes all codes from this FHIR server's representation of OMIM, Mondo and NICt CodeSystems."]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose">fhir:ValueSet.compose</a> [ <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include">fhir:ValueSet.compose.include</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -332,7 +332,7 @@ <h2 id="root">: Disease Codes - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include.system">fhir:ValueSet.compose.include.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://purl.obolibrary.org/obo/mondo.owl" ] ], [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 2; <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include.system">fhir:ValueSet.compose.include.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://purl.obolibrary.org/obo/ncit.owl" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -370,7 +370,7 @@ <h2 id="root">: Disease Codes - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-disease-codes.xlsx b/ValueSet-disease-codes.xlsx index 83134fb7..2a6a8c72 100644 Binary files a/ValueSet-disease-codes.xlsx and b/ValueSet-disease-codes.xlsx differ diff --git a/ValueSet-disease-codes.xml b/ValueSet-disease-codes.xml index ca2691c2..4973b96b 100644 --- a/ValueSet-disease-codes.xml +++ b/ValueSet-disease-codes.xml @@ -11,7 +11,7 @@ <title value="Disease Codes"/> <status value="draft"/> <experimental value="false"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/ValueSet-disease-codes.xml.html b/ValueSet-disease-codes.xml.html index 0fccaa3f..b0df604f 100644 --- a/ValueSet-disease-codes.xml.html +++ b/ValueSet-disease-codes.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Disease Codes - XML Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -299,7 +299,7 @@ <h2 id="root">: Disease Codes - XML Representation</h2> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Disease Codes"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.experimental">experimental</a> <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">value</a>="false"/> - <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -359,7 +359,7 @@ <h2 id="root">: Disease Codes - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-example-study-data-dictionary-case-control-vs-1-testing.html b/ValueSet-example-study-data-dictionary-case-control-vs-1-testing.html index 3d3e200b..75b8f18a 100644 --- a/ValueSet-example-study-data-dictionary-case-control-vs-1-testing.html +++ b/ValueSet-example-study-data-dictionary-case-control-vs-1-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">ValueSet: Case/Control Vars for 'status' categoricals - Te Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">ValueSet: Case/Control Vars for 'status' categoricals - Te <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-example-study-data-dictionary-case-control-vs-1.change.history.html b/ValueSet-example-study-data-dictionary-case-control-vs-1.change.history.html index be0cda9d..42063c5f 100644 --- a/ValueSet-example-study-data-dictionary-case-control-vs-1.change.history.html +++ b/ValueSet-example-study-data-dictionary-case-control-vs-1.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ExampleStudyDataDictionaryCaseControlVS1 - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-example-study-data-dictionary-case-control-vs-1.html b/ValueSet-example-study-data-dictionary-case-control-vs-1.html index 7e1971b4..548a35e8 100644 --- a/ValueSet-example-study-data-dictionary-case-control-vs-1.html +++ b/ValueSet-example-study-data-dictionary-case-control-vs-1.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -280,7 +280,7 @@ <h2 id="root">ValueSet: Case/Control Vars for 'status' categoricals Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -391,7 +391,7 @@ <h3 id="expansion">Expansion</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-example-study-data-dictionary-case-control-vs-1.json b/ValueSet-example-study-data-dictionary-case-control-vs-1.json index d304e00a..17a27ba4 100644 --- a/ValueSet-example-study-data-dictionary-case-control-vs-1.json +++ b/ValueSet-example-study-data-dictionary-case-control-vs-1.json @@ -1,54 +1,44 @@ -{ - "resourceType": "ValueSet", - "id": "example-study-data-dictionary-case-control-vs-1", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include these codes as defined in <code>https://uts.nlm.nih.gov/uts/umls</code><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C99269</td><td>Case</td></tr><tr><td>C99270</td><td>Control</td></tr></table></li></ul></div>" - }, - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1", - "version": "0.2.0", - "name": "ExampleStudyDataDictionaryCaseControlVS1", - "title": "Case/Control Vars for 'status' categoricals", - "status": "draft", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "Example ValueSet listing all possible 'values' from the Case/Control variable.", - "compose": { - "include": [ - { - "system": "https://uts.nlm.nih.gov/uts/umls", - "concept": [ - { - "code": "C99269", - "display": "Case" - }, - { - "code": "C99270", - "display": "Control" - } - ] - } - ] - } +{ + "resourceType" : "ValueSet", + "id" : "example-study-data-dictionary-case-control-vs-1", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include these codes as defined in <code>https://uts.nlm.nih.gov/uts/umls</code><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C99269</td><td>Case</td></tr><tr><td>C99270</td><td>Control</td></tr></table></li></ul></div>" + }, + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1", + "version" : "0.2.0", + "name" : "ExampleStudyDataDictionaryCaseControlVS1", + "title" : "Case/Control Vars for 'status' categoricals", + "status" : "draft", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "Example ValueSet listing all possible 'values' from the Case/Control variable.", + "compose" : { + "include" : [{ + "system" : "https://uts.nlm.nih.gov/uts/umls", + "concept" : [{ + "code" : "C99269", + "display" : "Case" + }, + { + "code" : "C99270", + "display" : "Control" + }] + }] + } } \ No newline at end of file diff --git a/ValueSet-example-study-data-dictionary-case-control-vs-1.json.html b/ValueSet-example-study-data-dictionary-case-control-vs-1.json.html index 5b933ff1..f503a4f5 100644 --- a/ValueSet-example-study-data-dictionary-case-control-vs-1.json.html +++ b/ValueSet-example-study-data-dictionary-case-control-vs-1.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Case/Control Vars for 'status' categoricals - JSON Repre Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -297,7 +297,7 @@ <h2 id="root">: Case/Control Vars for 'status' categoricals - JSON Repre "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">name</a>" : "ExampleStudyDataDictionaryCaseControlVS1", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">title</a>" : "Case/Control Vars for 'status' categoricals", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">status</a>" : "draft", - "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">contact</a>" : [ { @@ -368,7 +368,7 @@ <h2 id="root">: Case/Control Vars for 'status' categoricals - JSON Repre <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-example-study-data-dictionary-case-control-vs-1.ttl b/ValueSet-example-study-data-dictionary-case-control-vs-1.ttl index de2b8eee..2b5c8aa3 100644 --- a/ValueSet-example-study-data-dictionary-case-control-vs-1.ttl +++ b/ValueSet-example-study-data-dictionary-case-control-vs-1.ttl @@ -7,18 +7,18 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1> a fhir:ValueSet; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "example-study-data-dictionary-case-control-vs-1"]; + fhir:Resource.id [ fhir:value "example-study-data-dictionary-case-control-vs-1"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include these codes as defined in <code>https://uts.nlm.nih.gov/uts/umls</code><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C99269</td><td>Case</td></tr><tr><td>C99270</td><td>Control</td></tr></table></li></ul></div>" - ]; - fhir:ValueSet.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1"]; - fhir:ValueSet.version [ fhir:value "0.2.0"]; - fhir:ValueSet.name [ fhir:value "ExampleStudyDataDictionaryCaseControlVS1"]; - fhir:ValueSet.title [ fhir:value "Case/Control Vars for 'status' categoricals"]; - fhir:ValueSet.status [ fhir:value "draft"]; - fhir:ValueSet.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:ValueSet.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:ValueSet.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1"]; # + fhir:ValueSet.version [ fhir:value "0.2.0"]; # + fhir:ValueSet.name [ fhir:value "ExampleStudyDataDictionaryCaseControlVS1"]; # + fhir:ValueSet.title [ fhir:value "Case/Control Vars for 'status' categoricals"]; # + fhir:ValueSet.status [ fhir:value "draft"]; # + fhir:ValueSet.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:ValueSet.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:ValueSet.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -36,8 +36,8 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:ValueSet.description [ fhir:value "Example ValueSet listing all possible 'values' from the Case/Control variable."]; + ]; # + fhir:ValueSet.description [ fhir:value "Example ValueSet listing all possible 'values' from the Case/Control variable."]; # fhir:ValueSet.compose [ fhir:ValueSet.compose.include [ fhir:index 0; @@ -52,7 +52,7 @@ fhir:ValueSet.compose.include.concept.display [ fhir:value "Control" ] ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ValueSet-example-study-data-dictionary-case-control-vs-1.ttl.html b/ValueSet-example-study-data-dictionary-case-control-vs-1.ttl.html index 92c3cc91..92794699 100644 --- a/ValueSet-example-study-data-dictionary-case-control-vs-1.ttl.html +++ b/ValueSet-example-study-data-dictionary-case-control-vs-1.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Case/Control Vars for 'status' categoricals - TTL Repres Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,18 +294,18 @@ <h2 id="root">: Case/Control Vars for 'status' categoricals - TTL Repres a fhir:ValueSet; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "example-study-data-dictionary-case-control-vs-1"]; + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "example-study-data-dictionary-case-control-vs-1"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include these codes as defined in <code>https://uts.nlm.nih.gov/uts/umls</code><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C99269</td><td>Case</td></tr><tr><td>C99270</td><td>Control</td></tr></table></li></ul></div>" - ]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.url">fhir:ValueSet.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.version">fhir:ValueSet.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">fhir:ValueSet.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ExampleStudyDataDictionaryCaseControlVS1"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">fhir:ValueSet.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Case/Control Vars for 'status' categoricals"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">fhir:ValueSet.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">fhir:ValueSet.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">fhir:ValueSet.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.url">fhir:ValueSet.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.version">fhir:ValueSet.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">fhir:ValueSet.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ExampleStudyDataDictionaryCaseControlVS1"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">fhir:ValueSet.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Case/Control Vars for 'status' categoricals"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">fhir:ValueSet.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">fhir:ValueSet.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">fhir:ValueSet.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">fhir:ValueSet.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -321,8 +321,8 @@ <h2 id="root">: Case/Control Vars for 'status' categoricals - TTL Repres <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.description">fhir:ValueSet.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Example ValueSet listing all possible 'values' from the Case/Control variable."]; + ]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.description">fhir:ValueSet.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Example ValueSet listing all possible 'values' from the Case/Control variable."]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose">fhir:ValueSet.compose</a> [ <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include">fhir:ValueSet.compose.include</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; @@ -334,7 +334,7 @@ <h2 id="root">: Case/Control Vars for 'status' categoricals - TTL Repres <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include.concept.code">fhir:ValueSet.compose.include.concept.code</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "C99270" ]; <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include.concept.display">fhir:ValueSet.compose.include.concept.display</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Control" ] ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -372,7 +372,7 @@ <h2 id="root">: Case/Control Vars for 'status' categoricals - TTL Repres <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-example-study-data-dictionary-case-control-vs-1.xlsx b/ValueSet-example-study-data-dictionary-case-control-vs-1.xlsx index f1629712..18b5583f 100644 Binary files a/ValueSet-example-study-data-dictionary-case-control-vs-1.xlsx and b/ValueSet-example-study-data-dictionary-case-control-vs-1.xlsx differ diff --git a/ValueSet-example-study-data-dictionary-case-control-vs-1.xml b/ValueSet-example-study-data-dictionary-case-control-vs-1.xml index 3ab5f4bd..5c5ac5d3 100644 --- a/ValueSet-example-study-data-dictionary-case-control-vs-1.xml +++ b/ValueSet-example-study-data-dictionary-case-control-vs-1.xml @@ -10,7 +10,7 @@ <name value="ExampleStudyDataDictionaryCaseControlVS1"/> <title value="Case/Control Vars for 'status' categoricals"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/ValueSet-example-study-data-dictionary-case-control-vs-1.xml.html b/ValueSet-example-study-data-dictionary-case-control-vs-1.xml.html index 3254bc72..8def7a41 100644 --- a/ValueSet-example-study-data-dictionary-case-control-vs-1.xml.html +++ b/ValueSet-example-study-data-dictionary-case-control-vs-1.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Case/Control Vars for 'status' categoricals - XML Repres Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: Case/Control Vars for 'status' categoricals - XML Repres <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="ExampleStudyDataDictionaryCaseControlVS1"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Case/Control Vars for 'status' categoricals"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> - <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -360,7 +360,7 @@ <h2 id="root">: Case/Control Vars for 'status' categoricals - XML Repres <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-loinc-answers-testing.html b/ValueSet-loinc-answers-testing.html index fce9e334..dd57af39 100644 --- a/ValueSet-loinc-answers-testing.html +++ b/ValueSet-loinc-answers-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">ValueSet: LOINC Answers - Testing Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">ValueSet: LOINC Answers - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-loinc-answers.change.history.html b/ValueSet-loinc-answers.change.history.html index 6de9e75e..b5b6b57e 100644 --- a/ValueSet-loinc-answers.change.history.html +++ b/ValueSet-loinc-answers.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: LoincAnswers - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-loinc-answers.html b/ValueSet-loinc-answers.html index b4ca9e73..e7a13e2e 100644 --- a/ValueSet-loinc-answers.html +++ b/ValueSet-loinc-answers.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -280,7 +280,7 @@ <h2 id="root">ValueSet: LOINC Answers Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -388,7 +388,7 @@ <h3 id="expansion">Expansion</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-loinc-answers.json b/ValueSet-loinc-answers.json index 56277db5..2534376b 100644 --- a/ValueSet-loinc-answers.json +++ b/ValueSet-loinc-answers.json @@ -1,45 +1,37 @@ -{ - "resourceType": "ValueSet", - "id": "loinc-answers", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-loinc-answers.html\"><code>ncpi:loinc-answers</code></a></li></ul></div>" - }, - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/loinc-answers", - "version": "0.2.0", - "name": "LoincAnswers", - "title": "LOINC Answers", - "status": "draft", - "experimental": false, - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "LOINC ANSWERS used by NCPI resources", - "compose": { - "include": [ - { - "system": "ncpi:loinc-answers" - } - ] - } +{ + "resourceType" : "ValueSet", + "id" : "loinc-answers", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-loinc-answers.html\"><code>ncpi:loinc-answers</code></a></li></ul></div>" + }, + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/loinc-answers", + "version" : "0.2.0", + "name" : "LoincAnswers", + "title" : "LOINC Answers", + "status" : "draft", + "experimental" : false, + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "LOINC ANSWERS used by NCPI resources", + "compose" : { + "include" : [{ + "system" : "ncpi:loinc-answers" + }] + } } \ No newline at end of file diff --git a/ValueSet-loinc-answers.json.html b/ValueSet-loinc-answers.json.html index df92b95a..fae949b4 100644 --- a/ValueSet-loinc-answers.json.html +++ b/ValueSet-loinc-answers.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: LOINC Answers - JSON Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: LOINC Answers - JSON Representation</h2> "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">title</a>" : "LOINC Answers", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">status</a>" : "draft", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.experimental">experimental</a>" : false, - "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">contact</a>" : [ { @@ -359,7 +359,7 @@ <h2 id="root">: LOINC Answers - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-loinc-answers.ttl b/ValueSet-loinc-answers.ttl index e9259e38..1a44fffc 100644 --- a/ValueSet-loinc-answers.ttl +++ b/ValueSet-loinc-answers.ttl @@ -7,19 +7,19 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/loinc-answers> a fhir:ValueSet; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "loinc-answers"]; + fhir:Resource.id [ fhir:value "loinc-answers"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-loinc-answers.html\"><code>ncpi:loinc-answers</code></a></li></ul></div>" - ]; - fhir:ValueSet.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/loinc-answers"]; - fhir:ValueSet.version [ fhir:value "0.2.0"]; - fhir:ValueSet.name [ fhir:value "LoincAnswers"]; - fhir:ValueSet.title [ fhir:value "LOINC Answers"]; - fhir:ValueSet.status [ fhir:value "draft"]; - fhir:ValueSet.experimental [ fhir:value "false"^^xsd:boolean]; - fhir:ValueSet.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:ValueSet.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:ValueSet.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/loinc-answers"]; # + fhir:ValueSet.version [ fhir:value "0.2.0"]; # + fhir:ValueSet.name [ fhir:value "LoincAnswers"]; # + fhir:ValueSet.title [ fhir:value "LOINC Answers"]; # + fhir:ValueSet.status [ fhir:value "draft"]; # + fhir:ValueSet.experimental [ fhir:value "false"^^xsd:boolean]; # + fhir:ValueSet.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:ValueSet.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:ValueSet.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -37,14 +37,14 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:ValueSet.description [ fhir:value "LOINC ANSWERS used by NCPI resources"]; + ]; # + fhir:ValueSet.description [ fhir:value "LOINC ANSWERS used by NCPI resources"]; # fhir:ValueSet.compose [ fhir:ValueSet.compose.include [ fhir:index 0; fhir:ValueSet.compose.include.system [ fhir:value "ncpi:loinc-answers" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ValueSet-loinc-answers.ttl.html b/ValueSet-loinc-answers.ttl.html index e26b98a2..46a2575d 100644 --- a/ValueSet-loinc-answers.ttl.html +++ b/ValueSet-loinc-answers.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: LOINC Answers - TTL Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,19 +294,19 @@ <h2 id="root">: LOINC Answers - TTL Representation</h2> a fhir:ValueSet; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "loinc-answers"]; + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "loinc-answers"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-loinc-answers.html\"><code>ncpi:loinc-answers</code></a></li></ul></div>" - ]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.url">fhir:ValueSet.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/loinc-answers"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.version">fhir:ValueSet.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">fhir:ValueSet.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "LoincAnswers"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">fhir:ValueSet.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "LOINC Answers"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">fhir:ValueSet.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.experimental">fhir:ValueSet.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">fhir:ValueSet.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">fhir:ValueSet.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.url">fhir:ValueSet.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/loinc-answers"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.version">fhir:ValueSet.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">fhir:ValueSet.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "LoincAnswers"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">fhir:ValueSet.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "LOINC Answers"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">fhir:ValueSet.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.experimental">fhir:ValueSet.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">fhir:ValueSet.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">fhir:ValueSet.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">fhir:ValueSet.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -322,13 +322,13 @@ <h2 id="root">: LOINC Answers - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.description">fhir:ValueSet.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "LOINC ANSWERS used by NCPI resources"]; + ]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.description">fhir:ValueSet.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "LOINC ANSWERS used by NCPI resources"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose">fhir:ValueSet.compose</a> [ <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include">fhir:ValueSet.compose.include</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include.system">fhir:ValueSet.compose.include.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "ncpi:loinc-answers" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -366,7 +366,7 @@ <h2 id="root">: LOINC Answers - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-loinc-answers.xlsx b/ValueSet-loinc-answers.xlsx index 5cb08d03..2a4f7667 100644 Binary files a/ValueSet-loinc-answers.xlsx and b/ValueSet-loinc-answers.xlsx differ diff --git a/ValueSet-loinc-answers.xml b/ValueSet-loinc-answers.xml index bdfaf324..5925a38c 100644 --- a/ValueSet-loinc-answers.xml +++ b/ValueSet-loinc-answers.xml @@ -11,7 +11,7 @@ <title value="LOINC Answers"/> <status value="draft"/> <experimental value="false"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/ValueSet-loinc-answers.xml.html b/ValueSet-loinc-answers.xml.html index a8f16f1c..da38aa61 100644 --- a/ValueSet-loinc-answers.xml.html +++ b/ValueSet-loinc-answers.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: LOINC Answers - XML Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -299,7 +299,7 @@ <h2 id="root">: LOINC Answers - XML Representation</h2> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="LOINC Answers"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.experimental">experimental</a> <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">value</a>="false"/> - <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -352,7 +352,7 @@ <h2 id="root">: LOINC Answers - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-ncpi-vs-testing.html b/ValueSet-ncpi-vs-testing.html index 7d84af21..2ae063b4 100644 --- a/ValueSet-ncpi-vs-testing.html +++ b/ValueSet-ncpi-vs-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">ValueSet: NCPI FHIR Codes - Testing Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">ValueSet: NCPI FHIR Codes - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-ncpi-vs.change.history.html b/ValueSet-ncpi-vs.change.history.html index c2c17977..e7264445 100644 --- a/ValueSet-ncpi-vs.change.history.html +++ b/ValueSet-ncpi-vs.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: Ncpi_VS - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-ncpi-vs.html b/ValueSet-ncpi-vs.html index 45c4c19a..b0edc1aa 100644 --- a/ValueSet-ncpi-vs.html +++ b/ValueSet-ncpi-vs.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -280,7 +280,7 @@ <h2 id="root">ValueSet: NCPI FHIR Codes Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -388,7 +388,7 @@ <h3 id="expansion">Expansion</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-ncpi-vs.json b/ValueSet-ncpi-vs.json index 2234b5fa..6c391c30 100644 --- a/ValueSet-ncpi-vs.json +++ b/ValueSet-ncpi-vs.json @@ -1,47 +1,39 @@ -{ - "resourceType": "ValueSet", - "id": "ncpi-vs", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This value set includes codes based on the following rules:</p><ul><li>Include all codes defined in <a href=\"CodeSystem-ncpi.html\"><code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi</code></a></li><li>Include all codes defined in <a href=\"CodeSystem-ncpi-data-types.html\"><code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types</code></a></li></ul></div>" - }, - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/ncpi-vs", - "version": "0.2.0", - "name": "Ncpi_VS", - "title": "NCPI FHIR Codes", - "status": "draft", - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "Codes that would apply to NCPI projects", - "compose": { - "include": [ - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi" - }, - { - "system": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types" - } - ] - } +{ + "resourceType" : "ValueSet", + "id" : "ncpi-vs", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This value set includes codes based on the following rules:</p><ul><li>Include all codes defined in <a href=\"CodeSystem-ncpi.html\"><code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi</code></a></li><li>Include all codes defined in <a href=\"CodeSystem-ncpi-data-types.html\"><code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types</code></a></li></ul></div>" + }, + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/ncpi-vs", + "version" : "0.2.0", + "name" : "Ncpi_VS", + "title" : "NCPI FHIR Codes", + "status" : "draft", + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "Codes that would apply to NCPI projects", + "compose" : { + "include" : [{ + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi" + }, + { + "system" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types" + }] + } } \ No newline at end of file diff --git a/ValueSet-ncpi-vs.json.html b/ValueSet-ncpi-vs.json.html index d9e98ced..3c85a8fd 100644 --- a/ValueSet-ncpi-vs.json.html +++ b/ValueSet-ncpi-vs.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: NCPI FHIR Codes - JSON Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -297,7 +297,7 @@ <h2 id="root">: NCPI FHIR Codes - JSON Representation</h2> "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">name</a>" : "Ncpi_VS", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">title</a>" : "NCPI FHIR Codes", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">status</a>" : "draft", - "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">contact</a>" : [ { @@ -361,7 +361,7 @@ <h2 id="root">: NCPI FHIR Codes - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-ncpi-vs.ttl b/ValueSet-ncpi-vs.ttl index f594d5fc..ee021950 100644 --- a/ValueSet-ncpi-vs.ttl +++ b/ValueSet-ncpi-vs.ttl @@ -7,18 +7,18 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/ncpi-vs> a fhir:ValueSet; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "ncpi-vs"]; + fhir:Resource.id [ fhir:value "ncpi-vs"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This value set includes codes based on the following rules:</p><ul><li>Include all codes defined in <a href=\"CodeSystem-ncpi.html\"><code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi</code></a></li><li>Include all codes defined in <a href=\"CodeSystem-ncpi-data-types.html\"><code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types</code></a></li></ul></div>" - ]; - fhir:ValueSet.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/ncpi-vs"]; - fhir:ValueSet.version [ fhir:value "0.2.0"]; - fhir:ValueSet.name [ fhir:value "Ncpi_VS"]; - fhir:ValueSet.title [ fhir:value "NCPI FHIR Codes"]; - fhir:ValueSet.status [ fhir:value "draft"]; - fhir:ValueSet.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:ValueSet.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:ValueSet.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/ncpi-vs"]; # + fhir:ValueSet.version [ fhir:value "0.2.0"]; # + fhir:ValueSet.name [ fhir:value "Ncpi_VS"]; # + fhir:ValueSet.title [ fhir:value "NCPI FHIR Codes"]; # + fhir:ValueSet.status [ fhir:value "draft"]; # + fhir:ValueSet.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:ValueSet.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:ValueSet.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -36,8 +36,8 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:ValueSet.description [ fhir:value "Codes that would apply to NCPI projects"]; + ]; # + fhir:ValueSet.description [ fhir:value "Codes that would apply to NCPI projects"]; # fhir:ValueSet.compose [ fhir:ValueSet.compose.include [ fhir:index 0; @@ -46,7 +46,7 @@ fhir:index 1; fhir:ValueSet.compose.include.system [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ValueSet-ncpi-vs.ttl.html b/ValueSet-ncpi-vs.ttl.html index 14b00b84..31932686 100644 --- a/ValueSet-ncpi-vs.ttl.html +++ b/ValueSet-ncpi-vs.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: NCPI FHIR Codes - TTL Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,18 +294,18 @@ <h2 id="root">: NCPI FHIR Codes - TTL Representation</h2> a fhir:ValueSet; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-vs"]; + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ncpi-vs"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This value set includes codes based on the following rules:</p><ul><li>Include all codes defined in <a href=\"CodeSystem-ncpi.html\"><code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi</code></a></li><li>Include all codes defined in <a href=\"CodeSystem-ncpi-data-types.html\"><code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types</code></a></li></ul></div>" - ]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.url">fhir:ValueSet.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/ncpi-vs"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.version">fhir:ValueSet.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">fhir:ValueSet.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Ncpi_VS"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">fhir:ValueSet.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Codes"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">fhir:ValueSet.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">fhir:ValueSet.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">fhir:ValueSet.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.url">fhir:ValueSet.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/ncpi-vs"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.version">fhir:ValueSet.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">fhir:ValueSet.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Ncpi_VS"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">fhir:ValueSet.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Codes"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">fhir:ValueSet.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">fhir:ValueSet.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">fhir:ValueSet.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">fhir:ValueSet.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -321,15 +321,15 @@ <h2 id="root">: NCPI FHIR Codes - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.description">fhir:ValueSet.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Codes that would apply to NCPI projects"]; + ]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.description">fhir:ValueSet.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "Codes that would apply to NCPI projects"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose">fhir:ValueSet.compose</a> [ <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include">fhir:ValueSet.compose.include</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include.system">fhir:ValueSet.compose.include.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi" ] ], [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 1; <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include.system">fhir:ValueSet.compose.include.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -367,7 +367,7 @@ <h2 id="root">: NCPI FHIR Codes - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-ncpi-vs.xlsx b/ValueSet-ncpi-vs.xlsx index cc165d4b..00778b93 100644 Binary files a/ValueSet-ncpi-vs.xlsx and b/ValueSet-ncpi-vs.xlsx differ diff --git a/ValueSet-ncpi-vs.xml b/ValueSet-ncpi-vs.xml index f940b9bd..4de6f1d4 100644 --- a/ValueSet-ncpi-vs.xml +++ b/ValueSet-ncpi-vs.xml @@ -10,7 +10,7 @@ <name value="Ncpi_VS"/> <title value="NCPI FHIR Codes"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/ValueSet-ncpi-vs.xml.html b/ValueSet-ncpi-vs.xml.html index 73bdcd75..59bbf875 100644 --- a/ValueSet-ncpi-vs.xml.html +++ b/ValueSet-ncpi-vs.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: NCPI FHIR Codes - XML Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -297,7 +297,7 @@ <h2 id="root">: NCPI FHIR Codes - XML Representation</h2> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Ncpi_VS"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Codes"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> - <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -355,7 +355,7 @@ <h2 id="root">: NCPI FHIR Codes - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-phenotype-codes-testing.html b/ValueSet-phenotype-codes-testing.html index 8204ff8f..5fce416a 100644 --- a/ValueSet-phenotype-codes-testing.html +++ b/ValueSet-phenotype-codes-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h2 id="root">ValueSet: Phenotype Codes - Testing Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -309,7 +309,7 @@ <h2 id="root">ValueSet: Phenotype Codes - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-phenotype-codes.change.history.html b/ValueSet-phenotype-codes.change.history.html index 7ade7cdb..b80a83a9 100644 --- a/ValueSet-phenotype-codes.change.history.html +++ b/ValueSet-phenotype-codes.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: PhenotypeCodes - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-phenotype-codes.html b/ValueSet-phenotype-codes.html index 52ac20bf..7f90880c 100644 --- a/ValueSet-phenotype-codes.html +++ b/ValueSet-phenotype-codes.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -280,7 +280,7 @@ <h2 id="root">ValueSet: Phenotype Codes Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -390,7 +390,7 @@ <h3 id="expansion">Expansion</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-phenotype-codes.json b/ValueSet-phenotype-codes.json index ef6c7c61..99c7ac64 100644 --- a/ValueSet-phenotype-codes.json +++ b/ValueSet-phenotype-codes.json @@ -1,45 +1,37 @@ -{ - "resourceType": "ValueSet", - "id": "phenotype-codes", - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-hpo.html\"><code>http://purl.obolibrary.org/obo/hp.owl</code></a></li></ul></div>" - }, - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/phenotype-codes", - "version": "0.2.0", - "name": "PhenotypeCodes", - "title": "Phenotype Codes", - "status": "draft", - "experimental": false, - "date": "2022-11-28T21:07:57+00:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "This value set includes all codes from Human Phenotype Ontology.", - "compose": { - "include": [ - { - "system": "http://purl.obolibrary.org/obo/hp.owl" - } - ] - } +{ + "resourceType" : "ValueSet", + "id" : "phenotype-codes", + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-hpo.html\"><code>http://purl.obolibrary.org/obo/hp.owl</code></a></li></ul></div>" + }, + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/phenotype-codes", + "version" : "0.2.0", + "name" : "PhenotypeCodes", + "title" : "Phenotype Codes", + "status" : "draft", + "experimental" : false, + "date" : "2022-12-09T17:30:30+00:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "This value set includes all codes from Human Phenotype Ontology.", + "compose" : { + "include" : [{ + "system" : "http://purl.obolibrary.org/obo/hp.owl" + }] + } } \ No newline at end of file diff --git a/ValueSet-phenotype-codes.json.html b/ValueSet-phenotype-codes.json.html index 63a636c6..e5d96967 100644 --- a/ValueSet-phenotype-codes.json.html +++ b/ValueSet-phenotype-codes.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Phenotype Codes - JSON Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -298,7 +298,7 @@ <h2 id="root">: Phenotype Codes - JSON Representation</h2> "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">title</a>" : "Phenotype Codes", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">status</a>" : "draft", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.experimental">experimental</a>" : false, - "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a>" : "2022-11-28T21:07:57+00:00", + "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a>" : "2022-12-09T17:30:30+00:00", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">publisher</a>" : "NCPI FHIR Working Group", "<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">contact</a>" : [ { @@ -359,7 +359,7 @@ <h2 id="root">: Phenotype Codes - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-phenotype-codes.ttl b/ValueSet-phenotype-codes.ttl index db1c366e..9271763e 100644 --- a/ValueSet-phenotype-codes.ttl +++ b/ValueSet-phenotype-codes.ttl @@ -7,19 +7,19 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/phenotype-codes> a fhir:ValueSet; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "phenotype-codes"]; + fhir:Resource.id [ fhir:value "phenotype-codes"]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-hpo.html\"><code>http://purl.obolibrary.org/obo/hp.owl</code></a></li></ul></div>" - ]; - fhir:ValueSet.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/phenotype-codes"]; - fhir:ValueSet.version [ fhir:value "0.2.0"]; - fhir:ValueSet.name [ fhir:value "PhenotypeCodes"]; - fhir:ValueSet.title [ fhir:value "Phenotype Codes"]; - fhir:ValueSet.status [ fhir:value "draft"]; - fhir:ValueSet.experimental [ fhir:value "false"^^xsd:boolean]; - fhir:ValueSet.date [ fhir:value "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - fhir:ValueSet.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:ValueSet.url [ fhir:value "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/phenotype-codes"]; # + fhir:ValueSet.version [ fhir:value "0.2.0"]; # + fhir:ValueSet.name [ fhir:value "PhenotypeCodes"]; # + fhir:ValueSet.title [ fhir:value "Phenotype Codes"]; # + fhir:ValueSet.status [ fhir:value "draft"]; # + fhir:ValueSet.experimental [ fhir:value "false"^^xsd:boolean]; # + fhir:ValueSet.date [ fhir:value "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + fhir:ValueSet.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:ValueSet.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -37,14 +37,14 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:ValueSet.description [ fhir:value "This value set includes all codes from Human Phenotype Ontology."]; + ]; # + fhir:ValueSet.description [ fhir:value "This value set includes all codes from Human Phenotype Ontology."]; # fhir:ValueSet.compose [ fhir:ValueSet.compose.include [ fhir:index 0; fhir:ValueSet.compose.include.system [ fhir:value "http://purl.obolibrary.org/obo/hp.owl" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ValueSet-phenotype-codes.ttl.html b/ValueSet-phenotype-codes.ttl.html index 074c71b4..b7469f2d 100644 --- a/ValueSet-phenotype-codes.ttl.html +++ b/ValueSet-phenotype-codes.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Phenotype Codes - TTL Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -294,19 +294,19 @@ <h2 id="root">: Phenotype Codes - TTL Representation</h2> a fhir:ValueSet; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "phenotype-codes"]; + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "phenotype-codes"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-hpo.html\"><code>http://purl.obolibrary.org/obo/hp.owl</code></a></li></ul></div>" - ]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.url">fhir:ValueSet.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/phenotype-codes"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.version">fhir:ValueSet.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">fhir:ValueSet.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "PhenotypeCodes"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">fhir:ValueSet.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Phenotype Codes"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">fhir:ValueSet.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.experimental">fhir:ValueSet.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">fhir:ValueSet.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-11-28T21:07:57+00:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">fhir:ValueSet.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.url">fhir:ValueSet.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/phenotype-codes"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.version">fhir:ValueSet.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">fhir:ValueSet.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "PhenotypeCodes"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">fhir:ValueSet.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "Phenotype Codes"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">fhir:ValueSet.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "draft"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.experimental">fhir:ValueSet.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">fhir:ValueSet.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2022-12-09T17:30:30+00:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">fhir:ValueSet.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">fhir:ValueSet.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -322,13 +322,13 @@ <h2 id="root">: Phenotype Codes - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.description">fhir:ValueSet.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "This value set includes all codes from Human Phenotype Ontology."]; + ]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.description">fhir:ValueSet.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "This value set includes all codes from Human Phenotype Ontology."]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose">fhir:ValueSet.compose</a> [ <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include">fhir:ValueSet.compose.include</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include.system">fhir:ValueSet.compose.include.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://purl.obolibrary.org/obo/hp.owl" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -366,7 +366,7 @@ <h2 id="root">: Phenotype Codes - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-phenotype-codes.xlsx b/ValueSet-phenotype-codes.xlsx index 511e19da..444e4637 100644 Binary files a/ValueSet-phenotype-codes.xlsx and b/ValueSet-phenotype-codes.xlsx differ diff --git a/ValueSet-phenotype-codes.xml b/ValueSet-phenotype-codes.xml index 12cd29b3..82a831a6 100644 --- a/ValueSet-phenotype-codes.xml +++ b/ValueSet-phenotype-codes.xml @@ -11,7 +11,7 @@ <title value="Phenotype Codes"/> <status value="draft"/> <experimental value="false"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> diff --git a/ValueSet-phenotype-codes.xml.html b/ValueSet-phenotype-codes.xml.html index 5542269c..d9c510b9 100644 --- a/ValueSet-phenotype-codes.xml.html +++ b/ValueSet-phenotype-codes.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -268,7 +268,7 @@ <h2 id="root">: Phenotype Codes - XML Representation</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -299,7 +299,7 @@ <h2 id="root">: Phenotype Codes - XML Representation</h2> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">title</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="Phenotype Codes"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">status</a> <a href="http://hl7.org/fhir/R4/datatypes.html#code">value</a>="draft"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.experimental">experimental</a> <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">value</a>="false"/> - <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-11-28T21:07:57+00:00"/> + <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">date</a> <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">value</a>="2022-12-09T17:30:30+00:00"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">publisher</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> <<a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">contact</a>> <<a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">name</a> <a href="http://hl7.org/fhir/R4/datatypes.html#string">value</a>="NCPI FHIR Working Group"/> @@ -353,7 +353,7 @@ <h2 id="root">: Phenotype Codes - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-tbd-codes-testing.html b/ValueSet-tbd-codes-testing.html index be79da12..eb6bbb69 100644 --- a/ValueSet-tbd-codes-testing.html +++ b/ValueSet-tbd-codes-testing.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -309,7 +309,7 @@ <h2 id="root">ValueSet: tbd-codes - Testing <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-tbd-codes.change.history.html b/ValueSet-tbd-codes.change.history.html index 12cf72bb..df212d8b 100644 --- a/ValueSet-tbd-codes.change.history.html +++ b/ValueSet-tbd-codes.change.history.html @@ -154,7 +154,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -312,7 +312,7 @@ <h2 id="root">: ToBeDeterminedCodes - Change History</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-tbd-codes.html b/ValueSet-tbd-codes.html index be04efe8..59092496 100644 --- a/ValueSet-tbd-codes.html +++ b/ValueSet-tbd-codes.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -401,7 +401,7 @@ <h3 id="expansion">Expansion</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-tbd-codes.json b/ValueSet-tbd-codes.json index d636e273..dde82825 100644 --- a/ValueSet-tbd-codes.json +++ b/ValueSet-tbd-codes.json @@ -1,56 +1,44 @@ -{ - "resourceType": "ValueSet", - "id": "tbd-codes", - "meta": { - "profile": [ - "http://hl7.org/fhir/StructureDefinition/shareablevalueset" - ] - }, - "text": { - "status": "generated", - "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-tbd-codes.html\"><code>http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes</code></a></li></ul></div>" - }, - "extension": [ - { - "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg", - "valueCode": "cg" - } - ], - "url": "http://hl7.org/fhir/uv/genomics-reporting/ValueSet/tbd-codes", - "version": "0.2.0", - "name": "ToBeDeterminedCodes", - "title": "tbd-codes", - "status": "active", - "experimental": false, - "date": "2019-08-21T00:00:00-04:00", - "publisher": "NCPI FHIR Working Group", - "contact": [ - { - "name": "NCPI FHIR Working Group", - "telecom": [ - { - "system": "url", - "value": "https://github.com/nih-ncpi" - } - ] - }, - { - "name": "Meen Chul Kim", - "telecom": [ - { - "system": "email", - "value": "meenchul@d3b.center", - "use": "work" - } - ] - } - ], - "description": "This value set includes all TBD Codes", - "compose": { - "include": [ - { - "system": "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes" - } - ] - } +{ + "resourceType" : "ValueSet", + "id" : "tbd-codes", + "meta" : { + "profile" : ["http://hl7.org/fhir/StructureDefinition/shareablevalueset"] + }, + "text" : { + "status" : "generated", + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-tbd-codes.html\"><code>http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes</code></a></li></ul></div>" + }, + "extension" : [{ + "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg", + "valueCode" : "cg" + }], + "url" : "http://hl7.org/fhir/uv/genomics-reporting/ValueSet/tbd-codes", + "version" : "0.2.0", + "name" : "ToBeDeterminedCodes", + "title" : "tbd-codes", + "status" : "active", + "experimental" : false, + "date" : "2019-08-21T00:00:00-04:00", + "publisher" : "NCPI FHIR Working Group", + "contact" : [{ + "name" : "NCPI FHIR Working Group", + "telecom" : [{ + "system" : "url", + "value" : "https://github.com/nih-ncpi" + }] + }, + { + "name" : "Meen Chul Kim", + "telecom" : [{ + "system" : "email", + "value" : "meenchul@d3b.center", + "use" : "work" + }] + }], + "description" : "This value set includes all TBD Codes", + "compose" : { + "include" : [{ + "system" : "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes" + }] + } } \ No newline at end of file diff --git a/ValueSet-tbd-codes.json.html b/ValueSet-tbd-codes.json.html index 1c4b95e2..1a540af2 100644 --- a/ValueSet-tbd-codes.json.html +++ b/ValueSet-tbd-codes.json.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -370,7 +370,7 @@ <h2 id="root">: tbd-codes - JSON Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-tbd-codes.ttl b/ValueSet-tbd-codes.ttl index c015fab1..e8f47e1e 100644 --- a/ValueSet-tbd-codes.ttl +++ b/ValueSet-tbd-codes.ttl @@ -7,31 +7,31 @@ <https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/tbd-codes> a fhir:ValueSet; fhir:nodeRole fhir:treeRoot; - fhir:Resource.id [ fhir:value "tbd-codes"]; + fhir:Resource.id [ fhir:value "tbd-codes"]; # fhir:Resource.meta [ fhir:Meta.profile [ fhir:value "http://hl7.org/fhir/StructureDefinition/shareablevalueset"; fhir:index 0; fhir:link <http://hl7.org/fhir/StructureDefinition/shareablevalueset> ] - ]; + ]; # fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-tbd-codes.html\"><code>http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes</code></a></li></ul></div>" - ]; + ]; # fhir:DomainResource.extension [ fhir:index 0; fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg" ]; fhir:Extension.valueCode [ fhir:value "cg" ] - ]; - fhir:ValueSet.url [ fhir:value "http://hl7.org/fhir/uv/genomics-reporting/ValueSet/tbd-codes"]; - fhir:ValueSet.version [ fhir:value "0.2.0"]; - fhir:ValueSet.name [ fhir:value "ToBeDeterminedCodes"]; - fhir:ValueSet.title [ fhir:value "tbd-codes"]; - fhir:ValueSet.status [ fhir:value "active"]; - fhir:ValueSet.experimental [ fhir:value "false"^^xsd:boolean]; - fhir:ValueSet.date [ fhir:value "2019-08-21T00:00:00-04:00"^^xsd:dateTime]; - fhir:ValueSet.publisher [ fhir:value "NCPI FHIR Working Group"]; + ]; # + fhir:ValueSet.url [ fhir:value "http://hl7.org/fhir/uv/genomics-reporting/ValueSet/tbd-codes"]; # + fhir:ValueSet.version [ fhir:value "0.2.0"]; # + fhir:ValueSet.name [ fhir:value "ToBeDeterminedCodes"]; # + fhir:ValueSet.title [ fhir:value "tbd-codes"]; # + fhir:ValueSet.status [ fhir:value "active"]; # + fhir:ValueSet.experimental [ fhir:value "false"^^xsd:boolean]; # + fhir:ValueSet.date [ fhir:value "2019-08-21T00:00:00-04:00"^^xsd:dateTime]; # + fhir:ValueSet.publisher [ fhir:value "NCPI FHIR Working Group"]; # fhir:ValueSet.contact [ fhir:index 0; fhir:ContactDetail.name [ fhir:value "NCPI FHIR Working Group" ]; @@ -49,14 +49,14 @@ fhir:ContactPoint.value [ fhir:value "meenchul@d3b.center" ]; fhir:ContactPoint.use [ fhir:value "work" ] ] - ]; - fhir:ValueSet.description [ fhir:value "This value set includes all TBD Codes"]; + ]; # + fhir:ValueSet.description [ fhir:value "This value set includes all TBD Codes"]; # fhir:ValueSet.compose [ fhir:ValueSet.compose.include [ fhir:index 0; fhir:ValueSet.compose.include.system [ fhir:value "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes" ] ] - ] . + ] . # # - ontology header ------------------------------------------------------------ diff --git a/ValueSet-tbd-codes.ttl.html b/ValueSet-tbd-codes.ttl.html index 410e6e51..dd967847 100644 --- a/ValueSet-tbd-codes.ttl.html +++ b/ValueSet-tbd-codes.ttl.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -294,30 +294,30 @@ <h2 id="root">: tbd-codes - TTL Representation</h2> a fhir:ValueSet; <a href="http://hl7.org/fhir/R4/rdf.html#tree-root">fhir:nodeRole</a> fhir:treeRoot; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "tbd-codes"]; + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.id">fhir:Resource.id</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "tbd-codes"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.meta">fhir:Resource.meta</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Meta#Meta.profile">fhir:Meta.profile</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#canonical">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/shareablevalueset"; <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/rdf.html#reference">fhir:link</a> <http://hl7.org/fhir/StructureDefinition/shareablevalueset> ] - ]; + ]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.text">fhir:DomainResource.text</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#Narrative#Narrative.status">fhir:Narrative.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include all codes defined in <a href=\"CodeSystem-tbd-codes.html\"><code>http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes</code></a></li></ul></div>" - ]; + ]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.extension">fhir:DomainResource.extension</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.url">fhir:Extension.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg" ]; <a href="http://hl7.org/fhir/R4/extensibility.html#Extension#Extension.value[x]">fhir:Extension.valueCode</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "cg" ] - ]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.url">fhir:ValueSet.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/uv/genomics-reporting/ValueSet/tbd-codes"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.version">fhir:ValueSet.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">fhir:ValueSet.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ToBeDeterminedCodes"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">fhir:ValueSet.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "tbd-codes"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">fhir:ValueSet.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.experimental">fhir:ValueSet.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">fhir:ValueSet.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2019-08-21T00:00:00-04:00"^^xsd:dateTime]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">fhir:ValueSet.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; + ]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.url">fhir:ValueSet.url</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/uv/genomics-reporting/ValueSet/tbd-codes"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.version">fhir:ValueSet.version</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "0.2.0"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.name">fhir:ValueSet.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "ToBeDeterminedCodes"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.title">fhir:ValueSet.title</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "tbd-codes"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.status">fhir:ValueSet.status</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "active"]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.experimental">fhir:ValueSet.experimental</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#boolean">fhir:value</a> "false"^^xsd:boolean]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.date">fhir:ValueSet.date</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#dateTime">fhir:value</a> "2019-08-21T00:00:00-04:00"^^xsd:dateTime]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.publisher">fhir:ValueSet.publisher</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.contact">fhir:ValueSet.contact</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/metadatatypes.html#ContactDetail#ContactDetail.name">fhir:ContactDetail.name</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "NCPI FHIR Working Group" ]; @@ -333,13 +333,13 @@ <h2 id="root">: tbd-codes - TTL Representation</h2> <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.system">fhir:ContactPoint.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "email" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.value">fhir:ContactPoint.value</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#string">fhir:value</a> "meenchul@d3b.center" ]; <a href="http://hl7.org/fhir/R4/datatypes.html#ContactPoint#ContactPoint.use">fhir:ContactPoint.use</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#code">fhir:value</a> "work" ] ] - ]; - <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.description">fhir:ValueSet.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "This value set includes all TBD Codes"]; + ]; # + <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.description">fhir:ValueSet.description</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#markdown">fhir:value</a> "This value set includes all TBD Codes"]; # <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose">fhir:ValueSet.compose</a> [ <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include">fhir:ValueSet.compose.include</a> [ <a href="http://hl7.org/fhir/R4/rdf.html#index">fhir:index</a> 0; <a href="http://hl7.org/fhir/R4/valueset.html#ValueSet.compose.include.system">fhir:ValueSet.compose.include.system</a> [ <a href="http://hl7.org/fhir/R4/datatypes.html#uri">fhir:value</a> "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes" ] ] - ]. + ]. # # - ontology header ------------------------------------------------------------ @@ -377,7 +377,7 @@ <h2 id="root">: tbd-codes - TTL Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ValueSet-tbd-codes.xlsx b/ValueSet-tbd-codes.xlsx index 27a7906a..93f8de22 100644 Binary files a/ValueSet-tbd-codes.xlsx and b/ValueSet-tbd-codes.xlsx differ diff --git a/ValueSet-tbd-codes.xml.html b/ValueSet-tbd-codes.xml.html index ba57bd92..b91d1a0c 100644 --- a/ValueSet-tbd-codes.xml.html +++ b/ValueSet-tbd-codes.xml.html @@ -152,7 +152,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -360,7 +360,7 @@ <h2 id="root">: tbd-codes - XML Representation</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/artifacts.html b/artifacts.html index c10e3631..173b6efa 100644 --- a/artifacts.html +++ b/artifacts.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -1115,7 +1115,7 @@ <h3>Example: Example Instances </h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/authors.html b/authors.html index 5acb0750..489f7456 100644 --- a/authors.html +++ b/authors.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -311,7 +311,7 @@ <h3 id="authors">Authors</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/background.html b/background.html index d008bad9..49367cf6 100644 --- a/background.html +++ b/background.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -285,7 +285,7 @@ <h3 id="fhir-relevance">FHIR Relevance</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/canonicals.json b/canonicals.json index 08d552a3..0ee2faed 100644 --- a/canonicals.json +++ b/canonicals.json @@ -1,290 +1,288 @@ [ { - "id": "example-study-data-dictionary-conceptmap-1", - "type": "ConceptMap", - "url": "http://example.org/my-dataset/fhir/conceptmap/data-to-public", - "version": "0.2.0" + "id" : "example-study-data-dictionary-conceptmap-1", + "type" : "ConceptMap", + "url" : "http://example.org/my-dataset/fhir/conceptmap/data-to-public", + "version" : "0.2.0" }, { - "id": "tbd-codes", - "type": "CodeSystem", - "url": "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes", - "version": "0.2.0", - "name": "TbdCodes" + "id" : "tbd-codes", + "type" : "CodeSystem", + "url" : "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes", + "version" : "0.2.0", + "name" : "TbdCodes" }, { - "id": "tbd-codes", - "type": "ValueSet", - "url": "http://hl7.org/fhir/uv/genomics-reporting/ValueSet/tbd-codes", - "version": "0.2.0", - "name": "ToBeDeterminedCodes" + "id" : "tbd-codes", + "type" : "ValueSet", + "url" : "http://hl7.org/fhir/uv/genomics-reporting/ValueSet/tbd-codes", + "version" : "0.2.0", + "name" : "ToBeDeterminedCodes" }, { - "id": "hpo", - "type": "CodeSystem", - "url": "http://purl.obolibrary.org/obo/hp.owl", - "version": "0.2.0", - "name": "HPO" + "id" : "hpo", + "type" : "CodeSystem", + "url" : "http://purl.obolibrary.org/obo/hp.owl", + "version" : "0.2.0", + "name" : "HPO" }, { - "id": "mondo", - "type": "CodeSystem", - "url": "http://purl.obolibrary.org/obo/mondo.owl", - "version": "0.2.0", - "name": "Mondo" + "id" : "mondo", + "type" : "CodeSystem", + "url" : "http://purl.obolibrary.org/obo/mondo.owl", + "version" : "0.2.0", + "name" : "Mondo" }, { - "id": "ncit", - "type": "CodeSystem", - "url": "http://purl.obolibrary.org/obo/ncit.owl", - "version": "0.2.0", - "name": "NCIt" + "id" : "ncit", + "type" : "CodeSystem", + "url" : "http://purl.obolibrary.org/obo/ncit.owl", + "version" : "0.2.0", + "name" : "NCIt" }, { - "id": "v3-hgvs", - "type": "CodeSystem", - "url": "http://varnomen.hgvs.org", - "version": "0.2.0", - "name": "Hgvs", - "oids": [ - "2.16.840.1.113883.6.282" - ] + "id" : "v3-hgvs", + "type" : "CodeSystem", + "url" : "http://varnomen.hgvs.org", + "version" : "0.2.0", + "name" : "Hgvs", + "oids" : ["2.16.840.1.113883.6.282"] }, { - "id": "example-study-data-dictionary-table-1", - "type": "ActivityDefinition", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1", - "version": "0.2.0" + "id" : "example-study-data-dictionary-table-1", + "type" : "ActivityDefinition", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ActivityDefinition/example-study-data-dictionary-table-1", + "version" : "0.2.0" }, { - "id": "ConditionInheritanceMode", - "type": "CodeSystem", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode", - "version": "0.2.0", - "name": "ConditionInheritanceMode" + "id" : "ConditionInheritanceMode", + "type" : "CodeSystem", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode", + "version" : "0.2.0", + "name" : "ConditionInheritanceMode" }, { - "id": "example-study-data-dictionary-dataset-codesystem-1", - "type": "CodeSystem", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1", - "version": "0.2.0", - "name": "ExampleStudyDataDictionaryStudyDatasetCS1" + "id" : "example-study-data-dictionary-dataset-codesystem-1", + "type" : "CodeSystem", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1", + "version" : "0.2.0", + "name" : "ExampleStudyDataDictionaryStudyDatasetCS1" }, { - "id": "example-study-data-dictionary-datatable-codesystem-1", - "type": "CodeSystem", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", - "version": "0.2.0", - "name": "ExampleStudyDataDictionaryStudyTableCS1" + "id" : "example-study-data-dictionary-datatable-codesystem-1", + "type" : "CodeSystem", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1", + "version" : "0.2.0", + "name" : "ExampleStudyDataDictionaryStudyTableCS1" }, { - "id": "ncpi", - "type": "CodeSystem", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", - "version": "0.2.0", - "name": "Ncpi" + "id" : "ncpi", + "type" : "CodeSystem", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi", + "version" : "0.2.0", + "name" : "Ncpi" }, { - "id": "ncpi-data-types", - "type": "CodeSystem", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types", - "version": "0.2.0", - "name": "NcpiDataTypes" + "id" : "ncpi-data-types", + "type" : "CodeSystem", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-data-types", + "version" : "0.2.0", + "name" : "NcpiDataTypes" }, { - "id": "NCPI-FHIR-Implementation-Guide", - "type": "ImplementationGuide", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ImplementationGuide/NCPI-FHIR-Implementation-Guide", - "version": "0.2.0", - "name": "NCPIFHIRImplementationGuide" + "id" : "NCPI-FHIR-Implementation-Guide", + "type" : "ImplementationGuide", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ImplementationGuide/NCPI-FHIR-Implementation-Guide", + "version" : "0.2.0", + "name" : "NCPIFHIRImplementationGuide" }, { - "id": "disease", - "type": "StructureDefinition", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/disease", - "version": "0.2.0", - "name": "Disease" + "id" : "disease", + "type" : "StructureDefinition", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/disease", + "version" : "0.2.0", + "name" : "Disease" }, { - "id": "family-relationship", - "type": "StructureDefinition", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship", - "version": "0.2.0", - "name": "FamilyRelationship" + "id" : "family-relationship", + "type" : "StructureDefinition", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/family-relationship", + "version" : "0.2.0", + "name" : "FamilyRelationship" }, { - "id": "ncpi-drs-attachment", - "type": "StructureDefinition", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment", - "version": "0.2.0", - "name": "DRSAttachment" + "id" : "ncpi-drs-attachment", + "type" : "StructureDefinition", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-attachment", + "version" : "0.2.0", + "name" : "DRSAttachment" }, { - "id": "ncpi-drs-document-reference", - "type": "StructureDefinition", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-document-reference", - "version": "0.2.0", - "name": "DRSDocumentReference" + "id" : "ncpi-drs-document-reference", + "type" : "StructureDefinition", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-drs-document-reference", + "version" : "0.2.0", + "name" : "DRSDocumentReference" }, { - "id": "ncpi-research-document-reference", - "type": "StructureDefinition", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-document-reference", - "version": "0.2.0", - "name": "ResearchDocumentReference" + "id" : "ncpi-research-document-reference", + "type" : "StructureDefinition", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-document-reference", + "version" : "0.2.0", + "name" : "ResearchDocumentReference" }, { - "id": "ncpi-research-study", - "type": "StructureDefinition", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study", - "version": "0.2.0", - "name": "NcpiResearchStudy" + "id" : "ncpi-research-study", + "type" : "StructureDefinition", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-research-study", + "version" : "0.2.0", + "name" : "NcpiResearchStudy" }, { - "id": "ncpi-specimen-task", - "type": "StructureDefinition", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-specimen-task", - "version": "0.2.0", - "name": "SpecimenTask" + "id" : "ncpi-specimen-task", + "type" : "StructureDefinition", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/ncpi-specimen-task", + "version" : "0.2.0", + "name" : "SpecimenTask" }, { - "id": "phenotype", - "type": "StructureDefinition", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/phenotype", - "version": "0.2.0", - "name": "Phenotype" + "id" : "phenotype", + "type" : "StructureDefinition", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/phenotype", + "version" : "0.2.0", + "name" : "Phenotype" }, { - "id": "raw-data-observation", - "type": "StructureDefinition", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/raw-data-observation", - "version": "0.2.0", - "name": "RawDataObservation" + "id" : "raw-data-observation", + "type" : "StructureDefinition", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/raw-data-observation", + "version" : "0.2.0", + "name" : "RawDataObservation" }, { - "id": "study-data-dictionary-harmony", - "type": "StructureDefinition", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-harmony", - "version": "0.2.0", - "name": "StudyDataDictionaryHarmony" + "id" : "study-data-dictionary-harmony", + "type" : "StructureDefinition", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-harmony", + "version" : "0.2.0", + "name" : "StudyDataDictionaryHarmony" }, { - "id": "study-data-dictionary-table", - "type": "StructureDefinition", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-table", - "version": "0.2.0", - "name": "StudyDataDictionaryTable" + "id" : "study-data-dictionary-table", + "type" : "StructureDefinition", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-table", + "version" : "0.2.0", + "name" : "StudyDataDictionaryTable" }, { - "id": "study-data-dictionary-variable", - "type": "StructureDefinition", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable", - "version": "0.2.0", - "name": "StudyDataDictionaryVariable" + "id" : "study-data-dictionary-variable", + "type" : "StructureDefinition", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-data-dictionary-variable", + "version" : "0.2.0", + "name" : "StudyDataDictionaryVariable" }, { - "id": "study-group", - "type": "StructureDefinition", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group", - "version": "0.2.0", - "name": "StudyGroup" + "id" : "study-group", + "type" : "StructureDefinition", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-group", + "version" : "0.2.0", + "name" : "StudyGroup" }, { - "id": "study-summary", - "type": "StructureDefinition", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-summary", - "version": "0.2.0", - "name": "StudySummary" + "id" : "study-summary", + "type" : "StructureDefinition", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-summary", + "version" : "0.2.0", + "name" : "StudySummary" }, { - "id": "study-variable-summary", - "type": "StructureDefinition", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-variable-summary", - "version": "0.2.0", - "name": "StudyVariableSummary" + "id" : "study-variable-summary", + "type" : "StructureDefinition", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-variable-summary", + "version" : "0.2.0", + "name" : "StudyVariableSummary" }, { - "id": "supporting-info", - "type": "StructureDefinition", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info", - "version": "0.2.0", - "name": "SupportingInformation" + "id" : "supporting-info", + "type" : "StructureDefinition", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/supporting-info", + "version" : "0.2.0", + "name" : "SupportingInformation" }, { - "id": "condition-inheritance-vs", - "type": "ValueSet", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/condition-inheritance-vs", - "version": "0.2.0", - "name": "ConditionInheritanceModeVS" + "id" : "condition-inheritance-vs", + "type" : "ValueSet", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/condition-inheritance-vs", + "version" : "0.2.0", + "name" : "ConditionInheritanceModeVS" }, { - "id": "datatable-mappings-valueset-1", - "type": "ValueSet", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1", - "version": "0.2.0", - "name": "ExampleStudyTableMappingsVS1" + "id" : "datatable-mappings-valueset-1", + "type" : "ValueSet", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1", + "version" : "0.2.0", + "name" : "ExampleStudyTableMappingsVS1" }, { - "id": "datatable-valueset-1", - "type": "ValueSet", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1", - "version": "0.2.0", - "name": "ExampleStudyTableVS1" + "id" : "datatable-valueset-1", + "type" : "ValueSet", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1", + "version" : "0.2.0", + "name" : "ExampleStudyTableVS1" }, { - "id": "disease-codes", - "type": "ValueSet", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/disease-codes", - "version": "0.2.0", - "name": "DiseaseCodes" + "id" : "disease-codes", + "type" : "ValueSet", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/disease-codes", + "version" : "0.2.0", + "name" : "DiseaseCodes" }, { - "id": "example-study-data-dictionary-case-control-vs-1", - "type": "ValueSet", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1", - "version": "0.2.0", - "name": "ExampleStudyDataDictionaryCaseControlVS1" + "id" : "example-study-data-dictionary-case-control-vs-1", + "type" : "ValueSet", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1", + "version" : "0.2.0", + "name" : "ExampleStudyDataDictionaryCaseControlVS1" }, { - "id": "loinc-answers", - "type": "ValueSet", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/loinc-answers", - "version": "0.2.0", - "name": "LoincAnswers" + "id" : "loinc-answers", + "type" : "ValueSet", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/loinc-answers", + "version" : "0.2.0", + "name" : "LoincAnswers" }, { - "id": "ncpi-vs", - "type": "ValueSet", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/ncpi-vs", - "version": "0.2.0", - "name": "Ncpi_VS" + "id" : "ncpi-vs", + "type" : "ValueSet", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/ncpi-vs", + "version" : "0.2.0", + "name" : "Ncpi_VS" }, { - "id": "phenotype-codes", - "type": "ValueSet", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/phenotype-codes", - "version": "0.2.0", - "name": "PhenotypeCodes" + "id" : "phenotype-codes", + "type" : "ValueSet", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/phenotype-codes", + "version" : "0.2.0", + "name" : "PhenotypeCodes" }, { - "id": "example-questionnaire-demographics-1", - "type": "Questionnaire", - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics", - "version": "0.2.0", - "name": "Demographcs" + "id" : "example-questionnaire-demographics-1", + "type" : "Questionnaire", + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics", + "version" : "0.2.0", + "name" : "Demographcs" }, { - "id": "omim", - "type": "CodeSystem", - "url": "https://omim.org/", - "version": "0.2.0", - "name": "OMIM" + "id" : "omim", + "type" : "CodeSystem", + "url" : "https://omim.org/", + "version" : "0.2.0", + "name" : "OMIM" }, { - "id": "loinc-answers", - "type": "CodeSystem", - "url": "ncpi:loinc-answers", - "version": "0.2.0", - "name": "LoincAnswers" + "id" : "loinc-answers", + "type" : "CodeSystem", + "url" : "ncpi:loinc-answers", + "version" : "0.2.0", + "name" : "LoincAnswers" } -] \ No newline at end of file +] diff --git a/childhood_cancer.html b/childhood_cancer.html index f6834099..d0764a57 100644 --- a/childhood_cancer.html +++ b/childhood_cancer.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -271,7 +271,7 @@ <h3 id="childhood-cancer">Childhood Cancer</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/contact.html b/contact.html index f034a935..0dc27e75 100644 --- a/contact.html +++ b/contact.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -266,7 +266,7 @@ <h3 id="contact-information">Contact information</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/csvs.zip b/csvs.zip index 7794d459..ed919aa9 100644 Binary files a/csvs.zip and b/csvs.zip differ diff --git a/definitions.json.zip b/definitions.json.zip index 3064ab63..e301b539 100644 Binary files a/definitions.json.zip and b/definitions.json.zip differ diff --git a/definitions.ttl.zip b/definitions.ttl.zip index a66a142e..3291997e 100644 Binary files a/definitions.ttl.zip and b/definitions.ttl.zip differ diff --git a/definitions.xml.zip b/definitions.xml.zip index 0b4f8a6c..e8897edc 100644 Binary files a/definitions.xml.zip and b/definitions.xml.zip differ diff --git a/downloads.html b/downloads.html index fda19e6c..7305be05 100644 --- a/downloads.html +++ b/downloads.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -290,7 +290,7 @@ <h4 id="expansions">Expansions</h4> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ehr.html b/ehr.html index ef04dd37..9c56eba7 100644 --- a/ehr.html +++ b/ehr.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -273,7 +273,7 @@ <h3 id="ehr-data">EHR Data</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/example-study-data-dictionary-conceptmap-1.xlsx b/example-study-data-dictionary-conceptmap-1.xlsx index ff708d12..b6e262e8 100644 Binary files a/example-study-data-dictionary-conceptmap-1.xlsx and b/example-study-data-dictionary-conceptmap-1.xlsx differ diff --git a/example_raw_data.html b/example_raw_data.html index eb32ba84..c48acf60 100644 --- a/example_raw_data.html +++ b/example_raw_data.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -310,7 +310,7 @@ <h3 id="tabular-data-as-questionnaires-and-questionnaireresponses">Tabular Data <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/example_study_metadata.html b/example_study_metadata.html index 50e69af4..32981caf 100644 --- a/example_study_metadata.html +++ b/example_study_metadata.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -307,7 +307,7 @@ <h4 id="variable-summary">Variable Summary</h4> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/examples.json.zip b/examples.json.zip index b6736aa7..a0743e6a 100644 Binary files a/examples.json.zip and b/examples.json.zip differ diff --git a/examples.ttl.zip b/examples.ttl.zip index 9f5decb6..cff6c676 100644 Binary files a/examples.ttl.zip and b/examples.ttl.zip differ diff --git a/examples.xml.zip b/examples.xml.zip index 2a5fa251..1acc2b9b 100644 Binary files a/examples.xml.zip and b/examples.xml.zip differ diff --git a/excels.zip b/excels.zip index ac7fdd59..20cd4321 100644 Binary files a/excels.zip and b/excels.zip differ diff --git a/expansions.json b/expansions.json index 53b87c2b..aa27c262 100644 --- a/expansions.json +++ b/expansions.json @@ -1,8 +1,8 @@ { "resourceType" : "Bundle", - "id" : "3d406e78-15c6-4c2d-8592-6a8fe14481af", + "id" : "aa3ee620-a0bc-4f9b-bbdd-7d0683039967", "meta" : { - "lastUpdated" : "2022-11-28T21:07:57.188+00:00" + "lastUpdated" : "2022-12-09T17:30:30.064+00:00" }, "type" : "collection", "entry" : [{ @@ -19,7 +19,7 @@ "name" : "Ncpi_VS", "title" : "NCPI FHIR Codes", "status" : "draft", - "date" : "2022-11-28T21:07:57+00:00", + "date" : "2022-12-09T17:30:30+00:00", "publisher" : "NCPI FHIR Working Group", "contact" : [{ "name" : "NCPI FHIR Working Group", @@ -38,8 +38,8 @@ }], "description" : "Codes that would apply to NCPI projects", "expansion" : { - "identifier" : "urn:uuid:4d8609da-197c-40fa-916f-cb829f7071a2", - "timestamp" : "2022-11-28T21:08:41+00:00", + "identifier" : "urn:uuid:827d6782-defd-498f-b240-fc4f3e3fa21c", + "timestamp" : "2022-12-09T17:31:19+00:00", "total" : 21, "parameter" : [{ "name" : "excludeNested", @@ -184,7 +184,7 @@ "title" : "Phenotype Codes", "status" : "draft", "experimental" : false, - "date" : "2022-11-28T21:07:57+00:00", + "date" : "2022-12-09T17:30:30+00:00", "publisher" : "NCPI FHIR Working Group", "contact" : [{ "name" : "NCPI FHIR Working Group", @@ -203,8 +203,8 @@ }], "description" : "This value set includes all codes from Human Phenotype Ontology.", "expansion" : { - "identifier" : "urn:uuid:ffc25d40-3b03-47c3-812a-ea3e060d29fb", - "timestamp" : "2022-11-28T21:08:41+00:00", + "identifier" : "urn:uuid:77583575-d12b-4d49-9112-c68d4b984cb2", + "timestamp" : "2022-12-09T17:31:19+00:00", "total" : 1880, "parameter" : [{ "name" : "excludeNested", @@ -9636,7 +9636,7 @@ "title" : "LOINC Answers", "status" : "draft", "experimental" : false, - "date" : "2022-11-28T21:07:57+00:00", + "date" : "2022-12-09T17:30:30+00:00", "publisher" : "NCPI FHIR Working Group", "contact" : [{ "name" : "NCPI FHIR Working Group", @@ -9655,8 +9655,8 @@ }], "description" : "LOINC ANSWERS used by NCPI resources", "expansion" : { - "identifier" : "urn:uuid:2ba82914-273e-44eb-b673-fb7b7983bd80", - "timestamp" : "2022-11-28T21:08:45+00:00", + "identifier" : "urn:uuid:18c5f3f8-dec4-4b36-aaf8-9cfddbdfc2e5", + "timestamp" : "2022-12-09T17:31:24+00:00", "total" : 24, "parameter" : [{ "name" : "excludeNested", @@ -9830,8 +9830,8 @@ }], "description" : "This value set includes all TBD Codes", "expansion" : { - "identifier" : "urn:uuid:32830aae-d7a1-4811-a35b-55baf74fce2e", - "timestamp" : "2022-11-28T21:08:47+00:00", + "identifier" : "urn:uuid:a8552c4d-ac28-46c4-bf95-a673c00e5498", + "timestamp" : "2022-12-09T17:31:26+00:00", "total" : 18, "parameter" : [{ "name" : "excludeNested", @@ -9949,7 +9949,7 @@ "title" : "Disease Codes", "status" : "draft", "experimental" : false, - "date" : "2022-11-28T21:07:57+00:00", + "date" : "2022-12-09T17:30:30+00:00", "publisher" : "NCPI FHIR Working Group", "contact" : [{ "name" : "NCPI FHIR Working Group", @@ -9968,8 +9968,8 @@ }], "description" : "This value set includes all codes from this FHIR server's representation of OMIM, Mondo and NICt CodeSystems.", "expansion" : { - "identifier" : "urn:uuid:f5034d41-6efd-48df-b617-e6eda365533b", - "timestamp" : "2022-11-28T21:08:47+00:00", + "identifier" : "urn:uuid:c161fd2d-96c1-4a12-b99d-26557c7140a8", + "timestamp" : "2022-12-09T17:31:26+00:00", "total" : 504, "parameter" : [{ "name" : "excludeNested", @@ -12536,7 +12536,7 @@ "name" : "ConditionInheritanceModeVS", "title" : "Condition Inheritance Pattern", "status" : "active", - "date" : "2022-11-28T21:07:57+00:00", + "date" : "2022-12-09T17:30:30+00:00", "publisher" : "NCPI FHIR Working Group", "contact" : [{ "name" : "NCPI FHIR Working Group", @@ -12561,8 +12561,8 @@ }] }], "expansion" : { - "identifier" : "urn:uuid:90eb2e74-2972-49d5-9d36-2556303e7cbd", - "timestamp" : "2022-11-28T21:08:51+00:00", + "identifier" : "urn:uuid:1e39a66d-6e13-4a21-ae8a-da4e76e24a64", + "timestamp" : "2022-12-09T17:31:30+00:00", "total" : 25, "parameter" : [{ "name" : "excludeNested", @@ -12707,14 +12707,14 @@ "id" : "datatable-valueset-1", "text" : { "status" : "generated", - "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This value set contains 5 concepts</p><p style=\"border: black 1px dotted; background-color: #EEEEEE; padding: 8px; margin-bottom: 8px\">Expansion based on <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables) v0.2.0 (CodeSystem)</a></p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>System</b></td><td><b>Display</b></td><td><b><a href=\"ValueSet-datatable-mappings-valueset-1.html\">ConceptMap[http://example.org/my-dataset/fhir/conceptmap/data-to-public]</a></b></td></tr><tr><td style=\"white-space:nowrap\"><a name=\"https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-subjectid\"> </a>  <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-subjectid\">subjectid</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Subject's Unique Identifier</td><td><span title=\"EQUIVALENT\">~</span>C2348584</td></tr><tr><td style=\"white-space:nowrap\"><a name=\"https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-gender\"> </a>  <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-gender\">gender</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Gender</td><td><span title=\"EQUIVALENT\">~</span>C0079399</td></tr><tr><td style=\"white-space:nowrap\"><a name=\"https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-age-at-enrollment\"> </a>  <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-age_at_enrollment\">age_at_enrollment</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Subject's Age at Enrollment in days</td><td><span title=\"EQUIVALENT\">~</span>C168843</td></tr><tr><td style=\"white-space:nowrap\"><a name=\"https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-bmi\"> </a>  <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-bmi\">bmi</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Subject's BMI, Measured at Enrollment</td><td><span title=\"SOURCEISNARROWERTHANTARGET\"><</span>C1305855<br/><span title=\"SOURCEISNARROWERTHANTARGET\"><</span><a href=\"https://loinc.org/LP35925-4/\">LP35925-4</a></td></tr><tr><td style=\"white-space:nowrap\"><a name=\"https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-status\"> </a>  <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-status\">status</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Subject's status (Case or Control)</td><td><span title=\"EQUIVALENT\">~</span>C0872128<br/><span title=\"EQUIVALENT\">~</span><a href=\"CodeSystem-hpo.html#hpo-HP.580010772\">HP:0010772</a><br/><span title=\"EQUIVALENT\">~</span><a href=\"CodeSystem-mondo.html#mondo-MONDO.580017705\">MONDO:0017705</a><br/><span title=\"EQUIVALENT\">~</span><a href=\"CodeSystem-mondo.html#mondo-MONDO.580007130\">MONDO:0007130</a></td></tr></table></div>" + "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This value set contains 5 concepts</p><p style=\"border: black 1px dotted; background-color: #EEEEEE; padding: 8px; margin-bottom: 8px\">Expansion based on <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html\">Datatable CodeSystem (lists all variables) v0.2.0 (CodeSystem)</a></p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>System</b></td><td><b>Display</b></td><td><b><a href=\"ValueSet-datatable-mappings-valueset-1.html\">ConceptMap[http://example.org/my-dataset/fhir/conceptmap/data-to-public|0.2.0]</a></b></td></tr><tr><td style=\"white-space:nowrap\"><a name=\"https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-subjectid\"> </a>  <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-subjectid\">subjectid</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Subject's Unique Identifier</td><td><span title=\"EQUIVALENT\">~</span>C2348584</td></tr><tr><td style=\"white-space:nowrap\"><a name=\"https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-gender\"> </a>  <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-gender\">gender</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Gender</td><td><span title=\"EQUIVALENT\">~</span>C0079399</td></tr><tr><td style=\"white-space:nowrap\"><a name=\"https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-age-at-enrollment\"> </a>  <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-age_at_enrollment\">age_at_enrollment</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Subject's Age at Enrollment in days</td><td><span title=\"EQUIVALENT\">~</span>C168843</td></tr><tr><td style=\"white-space:nowrap\"><a name=\"https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-bmi\"> </a>  <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-bmi\">bmi</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Subject's BMI, Measured at Enrollment</td><td><span title=\"SOURCEISNARROWERTHANTARGET\"><</span>C1305855<br/><span title=\"SOURCEISNARROWERTHANTARGET\"><</span><a href=\"https://loinc.org/LP35925-4/\">LP35925-4</a></td></tr><tr><td style=\"white-space:nowrap\"><a name=\"https---nih-ncpi.github.io-ncpi-fhir-ig-CodeSystem-example-study-data-dictionary-datatable-codesystem-1-status\"> </a>  <a href=\"CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html#example-study-data-dictionary-datatable-codesystem-1-status\">status</a></td><td>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-datatable-codesystem-1</td><td>Subject's status (Case or Control)</td><td><span title=\"EQUIVALENT\">~</span>C0872128<br/><span title=\"EQUIVALENT\">~</span><a href=\"CodeSystem-hpo.html#hpo-HP.580010772\">HP:0010772</a><br/><span title=\"EQUIVALENT\">~</span><a href=\"CodeSystem-mondo.html#mondo-MONDO.580017705\">MONDO:0017705</a><br/><span title=\"EQUIVALENT\">~</span><a href=\"CodeSystem-mondo.html#mondo-MONDO.580007130\">MONDO:0007130</a></td></tr></table></div>" }, "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-valueset-1", "version" : "0.2.0", "name" : "ExampleStudyTableVS1", "title" : "Table ValueSet", "status" : "draft", - "date" : "2022-11-28T21:07:57+00:00", + "date" : "2022-12-09T17:30:30+00:00", "publisher" : "NCPI FHIR Working Group", "contact" : [{ "name" : "NCPI FHIR Working Group", @@ -12733,8 +12733,8 @@ }], "description" : "Example Data Table with 4 variables", "expansion" : { - "identifier" : "urn:uuid:8931958d-d663-4f34-a8f3-129051a8c4f6", - "timestamp" : "2022-11-28T21:08:53+00:00", + "identifier" : "urn:uuid:bc4ce203-1abd-44e3-913d-78f4926dd82e", + "timestamp" : "2022-12-09T17:31:32+00:00", "total" : 5, "parameter" : [{ "name" : "excludeNested", diff --git a/expansions.json.zip b/expansions.json.zip index c88f6c2f..10f06998 100644 Binary files a/expansions.json.zip and b/expansions.json.zip differ diff --git a/expansions.xml b/expansions.xml index c310b639..a65f4719 100644 --- a/expansions.xml +++ b/expansions.xml @@ -1,9 +1,9 @@ <?xml version="1.0" encoding="UTF-8"?> <Bundle xmlns="http://hl7.org/fhir"> - <id value="3d406e78-15c6-4c2d-8592-6a8fe14481af"/> + <id value="aa3ee620-a0bc-4f9b-bbdd-7d0683039967"/> <meta> - <lastUpdated value="2022-11-28T21:07:57.188+00:00"/> + <lastUpdated value="2022-12-09T17:30:30.064+00:00"/> </meta> <type value="collection"/> <entry> @@ -225,7 +225,7 @@ <name value="Ncpi_VS"/> <title value="NCPI FHIR Codes"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> @@ -244,8 +244,8 @@ </contact> <description value="Codes that would apply to NCPI projects"/> <expansion> - <identifier value="urn:uuid:4d8609da-197c-40fa-916f-cb829f7071a2"/> - <timestamp value="2022-11-28T21:08:41+00:00"/> + <identifier value="urn:uuid:827d6782-defd-498f-b240-fc4f3e3fa21c"/> + <timestamp value="2022-12-09T17:31:19+00:00"/> <total value="21"/> <parameter> <name value="excludeNested"/> @@ -15452,7 +15452,7 @@ <title value="Phenotype Codes"/> <status value="draft"/> <experimental value="false"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> @@ -15471,8 +15471,8 @@ </contact> <description value="This value set includes all codes from Human Phenotype Ontology."/> <expansion> - <identifier value="urn:uuid:ffc25d40-3b03-47c3-812a-ea3e060d29fb"/> - <timestamp value="2022-11-28T21:08:41+00:00"/> + <identifier value="urn:uuid:77583575-d12b-4d49-9112-c68d4b984cb2"/> + <timestamp value="2022-12-09T17:31:19+00:00"/> <total value="1880"/> <parameter> <name value="excludeNested"/> @@ -25115,7 +25115,7 @@ <title value="LOINC Answers"/> <status value="draft"/> <experimental value="false"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> @@ -25134,8 +25134,8 @@ </contact> <description value="LOINC ANSWERS used by NCPI resources"/> <expansion> - <identifier value="urn:uuid:2ba82914-273e-44eb-b673-fb7b7983bd80"/> - <timestamp value="2022-11-28T21:08:45+00:00"/> + <identifier value="urn:uuid:18c5f3f8-dec4-4b36-aaf8-9cfddbdfc2e5"/> + <timestamp value="2022-12-09T17:31:24+00:00"/> <total value="24"/> <parameter> <name value="excludeNested"/> @@ -25567,8 +25567,8 @@ </contact> <description value="This value set includes all TBD Codes"/> <expansion> - <identifier value="urn:uuid:32830aae-d7a1-4811-a35b-55baf74fce2e"/> - <timestamp value="2022-11-28T21:08:47+00:00"/> + <identifier value="urn:uuid:a8552c4d-ac28-46c4-bf95-a673c00e5498"/> + <timestamp value="2022-12-09T17:31:26+00:00"/> <total value="18"/> <parameter> <name value="excludeNested"/> @@ -29762,7 +29762,7 @@ <title value="Disease Codes"/> <status value="draft"/> <experimental value="false"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> @@ -29781,8 +29781,8 @@ </contact> <description value="This value set includes all codes from this FHIR server's representation of OMIM, Mondo and NICt CodeSystems."/> <expansion> - <identifier value="urn:uuid:f5034d41-6efd-48df-b617-e6eda365533b"/> - <timestamp value="2022-11-28T21:08:47+00:00"/> + <identifier value="urn:uuid:c161fd2d-96c1-4a12-b99d-26557c7140a8"/> + <timestamp value="2022-12-09T17:31:26+00:00"/> <total value="504"/> <parameter> <name value="excludeNested"/> @@ -32568,7 +32568,7 @@ <name value="ConditionInheritanceModeVS"/> <title value="Condition Inheritance Pattern"/> <status value="active"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> @@ -32593,8 +32593,8 @@ </coding> </jurisdiction> <expansion> - <identifier value="urn:uuid:90eb2e74-2972-49d5-9d36-2556303e7cbd"/> - <timestamp value="2022-11-28T21:08:51+00:00"/> + <identifier value="urn:uuid:1e39a66d-6e13-4a21-ae8a-da4e76e24a64"/> + <timestamp value="2022-12-09T17:31:30+00:00"/> <total value="25"/> <parameter> <name value="excludeNested"/> @@ -32758,7 +32758,7 @@ </td> <td> <b> - <a href="ValueSet-datatable-mappings-valueset-1.html">ConceptMap[http://example.org/my-dataset/fhir/conceptmap/data-to-public]</a> + <a href="ValueSet-datatable-mappings-valueset-1.html">ConceptMap[http://example.org/my-dataset/fhir/conceptmap/data-to-public|0.2.0]</a> </b> </td> </tr> @@ -32837,7 +32837,7 @@ <name value="ExampleStudyTableVS1"/> <title value="Table ValueSet"/> <status value="draft"/> - <date value="2022-11-28T21:07:57+00:00"/> + <date value="2022-12-09T17:30:30+00:00"/> <publisher value="NCPI FHIR Working Group"/> <contact> <name value="NCPI FHIR Working Group"/> @@ -32856,8 +32856,8 @@ </contact> <description value="Example Data Table with 4 variables"/> <expansion> - <identifier value="urn:uuid:8931958d-d663-4f34-a8f3-129051a8c4f6"/> - <timestamp value="2022-11-28T21:08:53+00:00"/> + <identifier value="urn:uuid:bc4ce203-1abd-44e3-913d-78f4926dd82e"/> + <timestamp value="2022-12-09T17:31:32+00:00"/> <total value="5"/> <parameter> <name value="excludeNested"/> diff --git a/expansions.xml.zip b/expansions.xml.zip index c685d56f..55fa90db 100644 Binary files a/expansions.xml.zip and b/expansions.xml.zip differ diff --git a/family.html b/family.html index 91df6af6..02512039 100644 --- a/family.html +++ b/family.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -272,7 +272,7 @@ <h3 id="relevant-artifacts">Relevant Artifacts</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/files.html b/files.html index e0320716..bf973cb0 100644 --- a/files.html +++ b/files.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -272,7 +272,7 @@ <h3 id="relevant-artifacts">Relevant Artifacts</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/finding_a_research_study.html b/finding_a_research_study.html index 379be10a..8bd180e5 100644 --- a/finding_a_research_study.html +++ b/finding_a_research_study.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -299,7 +299,7 @@ <h4 id="ncpi-study-variable-summary">NCPI Study Variable Summary</h4> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/full-ig.zip b/full-ig.zip index cc4ea41e..d0bef812 100644 Binary files a/full-ig.zip and b/full-ig.zip differ diff --git a/harmonization.html b/harmonization.html index 555135cd..63d25a91 100644 --- a/harmonization.html +++ b/harmonization.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -274,7 +274,7 @@ <h4 id="harmonization">Harmonization</h4> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ig_versioning.html b/ig_versioning.html index b59fe6ac..66ea62c4 100644 --- a/ig_versioning.html +++ b/ig_versioning.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -299,7 +299,7 @@ <h5 id="patch-indicates-basic-refinement">Patch Indicates Basic Refinement</h5> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/index.html b/index.html index 6df736e6..b0669301 100644 --- a/index.html +++ b/index.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -249,7 +249,7 @@ <h2>Home</h2> Draft - as of 2022-11-28 + as of 2022-12-09 </td> @@ -347,7 +347,7 @@ <h3 id="high-level-picture">High-level Picture</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/modular_ig.html b/modular_ig.html index 847bc8e0..dfade825 100644 --- a/modular_ig.html +++ b/modular_ig.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -270,7 +270,7 @@ <h2>Modular Ig</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/ncpi.html b/ncpi.html index 445d6fea..59c9e922 100644 --- a/ncpi.html +++ b/ncpi.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -285,7 +285,7 @@ <h3 id="fhir-relevance">FHIR Relevance</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/observations-summary.xlsx b/observations-summary.xlsx index 7e2971f5..ce94c2df 100644 Binary files a/observations-summary.xlsx and b/observations-summary.xlsx differ diff --git a/package.manifest.json b/package.manifest.json index 9cb9faec..fe81ca98 100644 --- a/package.manifest.json +++ b/package.manifest.json @@ -1,8 +1,6 @@ { - "version": "0.2.0", - "fhirVersion": [ - "4.0.1" - ], - "date": "20221128210711", - "name": "NCPI-FHIR-Implementation-Guide" -} \ No newline at end of file + "version" : "0.2.0", + "fhirVersion" : ["4.0.1"], + "date" : "20221209172940", + "name" : "NCPI-FHIR-Implementation-Guide" +} diff --git a/package.r4.manifest.json b/package.r4.manifest.json index f7b04dff..ec12391e 100644 --- a/package.r4.manifest.json +++ b/package.r4.manifest.json @@ -1,6 +1,6 @@ { - "version": "0.2.0", - "date": "20221128210711", - "notForPublication": true, - "name": "NCPI-FHIR-Implementation-Guide.r4" -} \ No newline at end of file + "version" : "0.2.0", + "date" : "20221209172940", + "notForPublication" : true, + "name" : "NCPI-FHIR-Implementation-Guide.r4" +} diff --git a/package.r4.tgz b/package.r4.tgz index 977d9af2..ebef2ec7 100644 Binary files a/package.r4.tgz and b/package.r4.tgz differ diff --git a/package.r4b.manifest.json b/package.r4b.manifest.json index ff6aa4c1..dc37f155 100644 --- a/package.r4b.manifest.json +++ b/package.r4b.manifest.json @@ -1,6 +1,6 @@ { - "version": "0.2.0", - "date": "20221128210711", - "notForPublication": true, - "name": "NCPI-FHIR-Implementation-Guide.r4b" -} \ No newline at end of file + "version" : "0.2.0", + "date" : "20221209172940", + "notForPublication" : true, + "name" : "NCPI-FHIR-Implementation-Guide.r4b" +} diff --git a/package.r4b.tgz b/package.r4b.tgz index f0d0d267..3f8fdf66 100644 Binary files a/package.r4b.tgz and b/package.r4b.tgz differ diff --git a/package.tgz b/package.tgz index 65c6a11f..ec2cb3d7 100644 Binary files a/package.tgz and b/package.tgz differ diff --git a/participant.html b/participant.html index a7299581..9be40854 100644 --- a/participant.html +++ b/participant.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -272,7 +272,7 @@ <h3 id="relevant-artifacts">Relevant Artifacts</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/performing_a_genomic_analysis.html b/performing_a_genomic_analysis.html index 386d1b75..bfffa784 100644 --- a/performing_a_genomic_analysis.html +++ b/performing_a_genomic_analysis.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -265,7 +265,7 @@ <h3 id="performing-a-genomic-analysis">Performing a Genomic Analysis</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/qa-dep.html b/qa-dep.html index a1589955..f703679c 100644 --- a/qa-dep.html +++ b/qa-dep.html @@ -5,7 +5,7 @@ <link href="fhir.css" rel="stylesheet"/> <body style="margin: 20px; background-color: #ffffff"> <h1>Dependent IGs Analysis for NCPI FHIR Implementation Guide</h1> - <p>Generated Mon Nov 28 21:09:24 UTC 2022 for NCPI-FHIR-Implementation-Guide</p> + <p>Generated Fri Dec 09 17:32:04 UTC 2022 for NCPI-FHIR-Implementation-Guide</p> <h2>Summary:</h2></tr> <p>no references</p> <h2>Details By IG</h2></tr> diff --git a/qa-tx.html b/qa-tx.html index a7df6091..def05fe4 100644 --- a/qa-tx.html +++ b/qa-tx.html @@ -13,17 +13,14 @@ access-control-allow-methods:GET, POST, PUT, PATCH, DELETE access-control-allow-origin:* access-control-expose-headers:Content-Location, Location -cache-control:public, max-age=600 connection:keep-alive content-length:1521 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:07:31 GMT -pragma:no-cache +date:Fri, 09 Dec 2022 17:29:59 GMT server:nginx -x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). 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"http://terminology.hl7.org/CodeSystem/v3-RelationshipConjunction"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-ReligiousAffiliation"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-ResponseLevel"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-ResponseModality"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-ResponseMode"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-RoleClass"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-RoleCode"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-RoleLinkStatus"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-RoleLinkType"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-RoleStatus"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-RouteOfAdministration"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-Sequencing"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-SetOperator"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-SoftwareNameExample"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-SpecimenType"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-styleType"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-substanceAdminSubstitution"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-SubstitutionCondition"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-TableCellHorizontalAlign"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-TableCellScope"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-TableCellVerticalAlign"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-TableFrame"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-TableRules"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-TargetAwareness"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-TelecommunicationAddressUse"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-TelecommunicationCapabilities"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-TimingEvent"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-TransmissionRelationshipTypeCode"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-TribalEntityUS"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-triggerEventID"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-URLScheme"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-VaccineManufacturer"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-VaccineType"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-VocabularyDomainQualifier"},{"uri" : "http://terminology.hl7.org/CodeSystem/v3-WorkClassificationODH"},{"uri" : "http://terminology.hl7.org/CodeSystem/validation-process"},{"uri" : "http://terminology.hl7.org/CodeSystem/validation-status"},{"uri" : "http://terminology.hl7.org/CodeSystem/validation-type"},{"uri" : "http://terminology.hl7.org/CodeSystem/variable-role"},{"uri" : "http://terminology.hl7.org/CodeSystem/variant-state"},{"uri" : "http://terminology.hl7.org/CodeSystem/verificationresult-communication-method"},{"uri" : "http://terminology.hl7.org/fhir/CodeSystem/medicationdispense-category"},{"uri" : "http://terminology.hl7.org/fhir/CodeSystem/medicationdispense-status-reason"},{"uri" : "http://unitsofmeasure.org"},{"uri" : "http://unstats.un.org/unsd/methods/m49/m49.htm"},{"uri" : "http://varnomen.hgvs.org"},{"uri" : "http://www.ada.org/snodent"},{"uri" : "http://www.nlm.nih.gov/research/umls/rxnorm"},{"uri" : "http://www.whocc.no/atc"},{"uri" : "https://www.cms.gov/Medicare/Medicare-Fee-for-Service-Payment/HospitalAcqCond/Coding"},{"uri" : "https://www.humanservices.gov.au/organisations/health-professionals/enablers/air-vaccine-code-formats"},{"uri" : "https://www.iana.org/time-zones"},{"uri" : "https://www.usps.com/"},{"uri" : "urn:ietf:bcp:13"},{"uri" : "urn:ietf:bcp:47"},{"uri" : "urn:ietf:rfc:3986"},{"uri" : "urn:iso:std:iso:11073:10101"},{"uri" : "urn:iso:std:iso:3166"},{"uri" : "urn:iso:std:iso:3166:-2"},{"uri" : "urn:iso:std:iso:4217"},{"uri" : "urn:iso-astm:E1762-95:2013"},{"uri" : "urn:oid:1.2.36.1.2001.1001.101.104.16592"},{"uri" : "urn:oid:1.2.36.1.2001.1005.17"},{"uri" : "urn:oid:2.16.840.1.113883.2.9.6.2.7"},{"uri" : "urn:oid:2.16.840.1.113883.3.1937.98.5.8"}],"expansion" : {"parameter" : [{"name" : "cache-id","documentation" : "This server supports caching terminology resources between calls. Clients only need to send value sets and codesystems once; there after tehy are automatically in scope for calls with the same cache-id. The cache is retained for 30 min from last call"},{"name" : "tx-resource","documentation" : "Additional valuesets needed for evaluation e.g. value sets referred to from the import statement of the value set being expanded"}]}} </pre> <hr/><a name="l3"> </a> <p>#3</p> @@ -68,12 +65,12 @@ connection:keep-alive content-length:285 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:07:59 GMT -last-modified:Mon, 28 Nov 2022 21:07:59 GMT +date:Fri, 09 Dec 2022 17:30:32 GMT +last-modified:Fri, 09 Dec 2022 17:30:32 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438572 +x-request-id:60-1125319 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "kg/m2"},{"name" : "system","valueString" : "http://unitsofmeasure.org"},{"name" : "code","valueString" : "kg/m2"},{"name" : "version","valueString" : "2.0.1"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -97,12 +94,12 @@ connection:keep-alive content-length:279 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:07:59 GMT -last-modified:Mon, 28 Nov 2022 21:07:59 GMT +date:Fri, 09 Dec 2022 17:30:32 GMT +last-modified:Fri, 09 Dec 2022 17:30:32 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438573 +x-request-id:60-1125322 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "uL"},{"name" : "system","valueString" : "http://unitsofmeasure.org"},{"name" : "code","valueString" : "uL"},{"name" : "version","valueString" : "2.0.1"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -126,12 +123,12 @@ connection:keep-alive content-length:279 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:07:59 GMT -last-modified:Mon, 28 Nov 2022 21:07:59 GMT +date:Fri, 09 Dec 2022 17:30:33 GMT +last-modified:Fri, 09 Dec 2022 17:30:33 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438575 +x-request-id:60-1125324 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "TR"},{"name" : "system","valueString" : "http://unitsofmeasure.org"},{"name" : "code","valueString" : "TR"},{"name" : "version","valueString" : "2.0.1"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -155,12 +152,12 @@ connection:keep-alive content-length:481 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:01 GMT -last-modified:Mon, 28 Nov 2022 21:08:01 GMT +date:Fri, 09 Dec 2022 17:30:34 GMT +last-modified:Fri, 09 Dec 2022 17:30:34 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438580 +x-request-id:60-1125327 {"resourceType" : "Parameters","parameter" : [{"name" : "result","valueBoolean" : false},{"name" : "message","valueString" : "The code system 'http://example.org/my-dataset/fhir/codesystem/research-encounter-class' is not known (encountered paired with code = 'survey'); The code provided (http://example.org/my-dataset/fhir/codesystem/research-encounter-class#survey) is not valid in the value set 'All codes known to the system'"},{"name" : "cause","valueString" : "not-found"}]} </pre> @@ -183,9 +180,9 @@ connection:keep-alive content-length:3656 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:02 GMT +date:Fri, 09 Dec 2022 17:30:35 GMT server:nginx -x-request-id:57-438582 +x-request-id:60-1125332 {"resourceType" : "OperationOutcome","text" : {"status" : "generated","div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls</p></div>"},"issue" : [{"severity" : "error","code" : "not-supported","details" : {"text" : "Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls"},"diagnostics" : "(0000000000ECECED){FHIRServer.exe} [00000000012CFCED] Unknown function at TMethodImplementationIntercept + $E289ED\r\n(000000000033D7AC){FHIRServer.exe} [000000000073E7AC] Unknown function at TMethodImplementationIntercept + $2974AC\r\n(000000000033F46E){FHIRServer.exe} [000000000074046E] Unknown function at TMethodImplementationIntercept + $29916E\r\n(000000000004B6F7){FHIRServer.exe} [000000000044C6F7] Unknown function at __dbk_fcall_wrapper + $2E2F7\r\n(000000000004BFEB){FHIRServer.exe} [000000000044CFEB] Unknown function at __dbk_fcall_wrapper + $2EBEB\r\n(0000000000011276){FHIRServer.exe} [0000000000412276]\r\n(00000000000112B1){FHIRServer.exe} [00000000004122B1]\r\n(0000000000ECECED){FHIRServer.exe} [00000000012CFCED] Unknown function at TMethodImplementationIntercept + $E289ED\r\n(0000000000EDAEDE){FHIRServer.exe} [00000000012DBEDE] Unknown function at TMethodImplementationIntercept + $E34BDE\r\n(0000000000ED861B){FHIRServer.exe} [00000000012D961B] Unknown function at TMethodImplementationIntercept + $E3231B\r\n(0000000000ED72AF){FHIRServer.exe} [00000000012D82AF] Unknown function at TMethodImplementationIntercept + $E30FAF\r\n(000000000109CE14){FHIRServer.exe} [000000000149DE14] Unknown function at TMethodImplementationIntercept + $FF6B14\r\n(000000000109C5C4){FHIRServer.exe} [000000000149D5C4] Unknown function at TMethodImplementationIntercept + $FF62C4\r\n(00000000013DCA77){FHIRServer.exe} [00000000017DDA77] Unknown function at TMethodImplementationIntercept + $1336777\r\n(00000000011587F2){FHIRServer.exe} [00000000015597F2] Unknown function at TMethodImplementationIntercept + $10B24F2\r\n(0000000001150BC7){FHIRServer.exe} [0000000001551BC7] Unknown function at TMethodImplementationIntercept + $10AA8C7\r\n(00000000023509CA){FHIRServer.exe} [00000000027519CA] Unknown function at TMethodImplementationIntercept + $22AA6CA\r\n(000000000234D561){FHIRServer.exe} [000000000274E561] Unknown function at TMethodImplementationIntercept + $22A7261\r\n(0000000002348313){FHIRServer.exe} [0000000002749313] Unknown function at TMethodImplementationIntercept + $22A2013\r\n(0000000006CAD3CF){FHIRServer.exe} [00000000070AE3CF] Unknown function at TMethodImplementationIntercept + $6C070CF\r\n(000000000025CA0C){FHIRServer.exe} [000000000065DA0C] Unknown function at TMethodImplementationIntercept + $1B670C\r\n(000000000025E666){FHIRServer.exe} [000000000065F666] Unknown function at TMethodImplementationIntercept + $1B8366\r\n(000000000023789E){FHIRServer.exe} [000000000063889E] Unknown function at TMethodImplementationIntercept + $19159E\r\n(0000000000235961){FHIRServer.exe} [0000000000636961] Unknown function at TMethodImplementationIntercept + $18F661\r\n(000000000023CE94){FHIRServer.exe} [000000000063DE94] Unknown function at TMethodImplementationIntercept + $196B94\r\n(000000000023BDBD){FHIRServer.exe} [000000000063CDBD] Unknown function at TMethodImplementationIntercept + $195ABD\r\n(0000000000138173){FHIRServer.exe} [0000000000539173] Unknown function at TMethodImplementationIntercept + $91E73\r\n(0000000000011E3D){FHIRServer.exe} [0000000000412E3D]\r\n(00000000000003D2){KERNEL32.DLL} [00007FFDEFEA13D2] BaseThreadInitThunk + $22\r\n(0000000000014504){ntdll.dll } [00007FFDF0F85504] RtlUserThreadStart + $34\r\n"}]} </pre> @@ -209,14 +206,14 @@ connection:keep-alive content-length:466 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:02 GMT -last-modified:Mon, 28 Nov 2022 21:08:02 GMT +date:Fri, 09 Dec 2022 17:30:35 GMT +last-modified:Fri, 09 Dec 2022 17:30:35 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438584 +x-request-id:60-1125334 -{"resourceType" : "ValueSet","language" : "en","status" : "active","expansion" : {"identifier" : "urn:uuid:e4165cbc-b725-489e-ae3c-8bdce5b77823","timestamp" : "2022-11-28T21:08:02.246Z","parameter" : [{"name" : "limitedExpansion","valueBoolean" : true},{"name" : "excludeNested","valueBoolean" : true},{"name" : "version","valueUri" : "http://loinc.org|2.73"}],"contains" : [{"system" : "http://loinc.org","code" : "LP35925-4","display" : "Body mass index (BMI)"}]}} +{"resourceType" : "ValueSet","language" : "en","status" : "active","expansion" : {"identifier" : "urn:uuid:d0b5233c-748c-4014-83e3-70e718a364cb","timestamp" : "2022-12-09T17:30:35.915Z","parameter" : [{"name" : "limitedExpansion","valueBoolean" : true},{"name" : "excludeNested","valueBoolean" : true},{"name" : "version","valueUri" : "http://loinc.org|2.73"}],"contains" : [{"system" : "http://loinc.org","code" : "LP35925-4","display" : "Body mass index (BMI)"}]}} </pre> <hr/><a name="l9"> </a> <p>#9</p> @@ -227,7 +224,7 @@ Accept: application/fhir+json Content-Type: application/fhir+json;charset=UTF-8 -{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"},{"name":"includeDefinition","valueBoolean":false},{"name":"excludeNested","valueBoolean":true},{"name":"tx-resource","resource":{"resourceType":"CodeSystem","id":"hpo","text":{"status":"generated","div":"<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Properties</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Type</b></td><td><b>Description</b></td></tr><tr><td>parent</td><td>code</td><td>Parent codes.</td></tr><tr><td>imported</td><td>boolean</td><td>Indicates if the concept is imported from another code system.</td></tr><tr><td>root</td><td>boolean</td><td>Indicates if this concept is a root concept (i.e. Thing is equivalent or a direct parent)</td></tr><tr><td>deprecated</td><td>boolean</td><td>Indicates if this concept is deprecated.</td></tr></table><p><b>Filters</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Description</b></td><td><b>operator</b></td><td><b>Value</b></td></tr><tr><td>root</td><td/><td>= </td><td>True or false.</td></tr><tr><td>deprecated</td><td/><td>= </td><td>True or false.</td></tr><tr><td>imported</td><td/><td>= </td><td>True or false</td></tr></table><p>This code system <code>http://purl.obolibrary.org/obo/hp.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">HP:0000365<a name=\"hpo-HP.580000365\"> </a></td><td>Hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002564<a name=\"hpo-HP.580002564\"> </a></td><td>obsolete Malformation of the heart and great vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0001028<a name=\"hpo-HP.580001028\"> </a></td><td>Hemangioma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000476<a name=\"hpo-HP.580000476\"> </a></td><td>Cystic hygroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000568<a name=\"hpo-HP.580000568\"> </a></td><td>Microphthalmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000518<a name=\"hpo-HP.580000518\"> </a></td><td>Cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000612<a name=\"hpo-HP.580000612\"> </a></td><td>Iris coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000567<a name=\"hpo-HP.580000567\"> </a></td><td>Chorioretinal coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000316<a name=\"hpo-HP.580000316\"> </a></td><td>Hypertelorism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000482<a name=\"hpo-HP.580000482\"> </a></td><td>Microcornea</td></tr><tr><td style=\"white-space:nowrap\">HP:0000588<a name=\"hpo-HP.580000588\"> </a></td><td>Optic nerve coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0004426<a name=\"hpo-HP.580004426\"> </a></td><td>Abnormality of the cheek</td></tr><tr><td style=\"white-space:nowrap\">HP:0009125<a name=\"hpo-HP.580009125\"> </a></td><td>Lipodystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002023<a name=\"hpo-HP.580002023\"> </a></td><td>Anal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003468<a name=\"hpo-HP.580003468\"> </a></td><td>Abnormal vertebral morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000545<a name=\"hpo-HP.580000545\"> </a></td><td>Myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000122<a name=\"hpo-HP.580000122\"> </a></td><td>Unilateral renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002143<a name=\"hpo-HP.580002143\"> </a></td><td>Abnormality of the spinal cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0003508<a name=\"hpo-HP.580003508\"> </a></td><td>Proportionate short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0000271<a name=\"hpo-HP.580000271\"> </a></td><td>Abnormality of the face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000637<a name=\"hpo-HP.580000637\"> </a></td><td>Long palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000492<a name=\"hpo-HP.580000492\"> </a></td><td>Abnormal eyelid morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000389<a name=\"hpo-HP.580000389\"> </a></td><td>Chronic otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0000400<a name=\"hpo-HP.580000400\"> </a></td><td>Macrotia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000405<a name=\"hpo-HP.580000405\"> </a></td><td>Conductive hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0012712<a name=\"hpo-HP.580012712\"> </a></td><td>Mild hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0005280<a name=\"hpo-HP.580005280\"> </a></td><td>Depressed nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000431<a name=\"hpo-HP.580000431\"> </a></td><td>Wide nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000319<a name=\"hpo-HP.580000319\"> </a></td><td>Smooth philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000175<a name=\"hpo-HP.580000175\"> </a></td><td>Cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001611<a name=\"hpo-HP.580001611\"> </a></td><td>Nasal speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0002099<a name=\"hpo-HP.580002099\"> </a></td><td>Asthma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001397<a name=\"hpo-HP.580001397\"> </a></td><td>Hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001081<a name=\"hpo-HP.580001081\"> </a></td><td>Cholelithiasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002650<a name=\"hpo-HP.580002650\"> </a></td><td>Scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001212<a name=\"hpo-HP.580001212\"> </a></td><td>Prominent fingertip pads</td></tr><tr><td style=\"white-space:nowrap\">HP:0001328<a name=\"hpo-HP.580001328\"> </a></td><td>Specific learning disability</td></tr><tr><td style=\"white-space:nowrap\">HP:0000824<a name=\"hpo-HP.580000824\"> </a></td><td>Growth hormone deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002607<a name=\"hpo-HP.580002607\"> </a></td><td>Bowel incontinence</td></tr><tr><td style=\"white-space:nowrap\">HP:0100731<a name=\"hpo-HP.580100731\"> </a></td><td>Transverse facial cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0000528<a name=\"hpo-HP.580000528\"> </a></td><td>Anophthalmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000601<a name=\"hpo-HP.580000601\"> </a></td><td>Hypotelorism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000369<a name=\"hpo-HP.580000369\"> </a></td><td>Low-set ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001274<a name=\"hpo-HP.580001274\"> </a></td><td>Agenesis of corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002084<a name=\"hpo-HP.580002084\"> </a></td><td>Encephalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0007033<a name=\"hpo-HP.580007033\"> </a></td><td>Cerebellar dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100336<a name=\"hpo-HP.580100336\"> </a></td><td>Bilateral cleft lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0100337<a name=\"hpo-HP.580100337\"> </a></td><td>Bilateral cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001511<a name=\"hpo-HP.580001511\"> </a></td><td>Intrauterine growth retardation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011451<a name=\"hpo-HP.580011451\"> </a></td><td>Congenital microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000324<a name=\"hpo-HP.580000324\"> </a></td><td>Facial asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0000581<a name=\"hpo-HP.580000581\"> </a></td><td>Blepharophimosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000508<a name=\"hpo-HP.580000508\"> </a></td><td>Ptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008551<a name=\"hpo-HP.580008551\"> </a></td><td>Microtia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001631<a name=\"hpo-HP.580001631\"> </a></td><td>Atrial septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0000085<a name=\"hpo-HP.580000085\"> </a></td><td>Horseshoe kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0011927<a name=\"hpo-HP.580011927\"> </a></td><td>Short digit</td></tr><tr><td style=\"white-space:nowrap\">HP:0001156<a name=\"hpo-HP.580001156\"> </a></td><td>Brachydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002066<a name=\"hpo-HP.580002066\"> </a></td><td>Gait ataxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001250<a name=\"hpo-HP.580001250\"> </a></td><td>Seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001263<a name=\"hpo-HP.580001263\"> </a></td><td>Global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0001562<a name=\"hpo-HP.580001562\"> </a></td><td>Oligohydramnios</td></tr><tr><td style=\"white-space:nowrap\">HP:0001195<a name=\"hpo-HP.580001195\"> </a></td><td>Single umbilical artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0006349<a name=\"hpo-HP.580006349\"> </a></td><td>Agenesis of permanent teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000668<a name=\"hpo-HP.580000668\"> </a></td><td>Hypodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000677<a name=\"hpo-HP.580000677\"> </a></td><td>Oligodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001252<a name=\"hpo-HP.580001252\"> </a></td><td>Muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003429<a name=\"hpo-HP.580003429\"> </a></td><td>CNS hypomyelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0010864<a name=\"hpo-HP.580010864\"> </a></td><td>Intellectual disability, severe</td></tr><tr><td style=\"white-space:nowrap\">HP:0004325<a name=\"hpo-HP.580004325\"> </a></td><td>Decreased body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000666<a name=\"hpo-HP.580000666\"> </a></td><td>Horizontal nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000218<a name=\"hpo-HP.580000218\"> </a></td><td>High palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0010809<a name=\"hpo-HP.580010809\"> </a></td><td>Broad uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000767<a name=\"hpo-HP.580000767\"> </a></td><td>Pectus excavatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0003691<a name=\"hpo-HP.580003691\"> </a></td><td>Scapular winging</td></tr><tr><td style=\"white-space:nowrap\">HP:0002616<a name=\"hpo-HP.580002616\"> </a></td><td>Aortic root aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0001601<a name=\"hpo-HP.580001601\"> </a></td><td>Laryngomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002021<a name=\"hpo-HP.580002021\"> </a></td><td>Pyloric stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001388<a name=\"hpo-HP.580001388\"> </a></td><td>Joint laxity</td></tr><tr><td style=\"white-space:nowrap\">HP:0001187<a name=\"hpo-HP.580001187\"> </a></td><td>Hyperextensibility of the finger joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0000741<a name=\"hpo-HP.580000741\"> </a></td><td>Apathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000817<a name=\"hpo-HP.580000817\"> </a></td><td>Poor eye contact</td></tr><tr><td style=\"white-space:nowrap\">HP:0000821<a name=\"hpo-HP.580000821\"> </a></td><td>Hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000002<a name=\"hpo-HP.580000002\"> </a></td><td>Abnormality of body height</td></tr><tr><td style=\"white-space:nowrap\">HP:0000079<a name=\"hpo-HP.580000079\"> </a></td><td>Abnormality of the urinary system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000164<a name=\"hpo-HP.580000164\"> </a></td><td>Abnormality of the dentition</td></tr><tr><td style=\"white-space:nowrap\">HP:0000364<a name=\"hpo-HP.580000364\"> </a></td><td>Hearing abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000366<a name=\"hpo-HP.580000366\"> </a></td><td>Abnormality of the nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0000464<a name=\"hpo-HP.580000464\"> </a></td><td>Abnormality of the neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000707<a name=\"hpo-HP.580000707\"> </a></td><td>Abnormality of the nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000708<a name=\"hpo-HP.580000708\"> </a></td><td>Behavioral abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000769<a name=\"hpo-HP.580000769\"> </a></td><td>Abnormality of the breast</td></tr><tr><td style=\"white-space:nowrap\">HP:0000772<a name=\"hpo-HP.580000772\"> </a></td><td>Abnormality of the ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000775<a name=\"hpo-HP.580000775\"> </a></td><td>Abnormality of the diaphragm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000889<a name=\"hpo-HP.580000889\"> </a></td><td>Abnormality of the clavicle</td></tr><tr><td style=\"white-space:nowrap\">HP:0000925<a name=\"hpo-HP.580000925\"> </a></td><td>Abnormality of the vertebral column</td></tr><tr><td style=\"white-space:nowrap\">HP:0001080<a name=\"hpo-HP.580001080\"> </a></td><td>Biliary tract abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001392<a name=\"hpo-HP.580001392\"> </a></td><td>Abnormality of the liver</td></tr><tr><td style=\"white-space:nowrap\">HP:0001438<a name=\"hpo-HP.580001438\"> </a></td><td>Abnormal abdomen morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001608<a name=\"hpo-HP.580001608\"> </a></td><td>Abnormality of the voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001627<a name=\"hpo-HP.580001627\"> </a></td><td>Abnormal heart morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001732<a name=\"hpo-HP.580001732\"> </a></td><td>Abnormality of the pancreas</td></tr><tr><td style=\"white-space:nowrap\">HP:0001739<a name=\"hpo-HP.580001739\"> </a></td><td>Abnormality of the nasopharynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0001743<a name=\"hpo-HP.580001743\"> </a></td><td>Abnormality of the spleen</td></tr><tr><td style=\"white-space:nowrap\">HP:0001760<a name=\"hpo-HP.580001760\"> </a></td><td>Abnormal foot morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001871<a name=\"hpo-HP.580001871\"> </a></td><td>Abnormality of blood and blood-forming tissues</td></tr><tr><td style=\"white-space:nowrap\">HP:0002031<a name=\"hpo-HP.580002031\"> </a></td><td>Abnormal esophagus morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002244<a name=\"hpo-HP.580002244\"> </a></td><td>Abnormality of the small intestine</td></tr><tr><td style=\"white-space:nowrap\">HP:0002246<a name=\"hpo-HP.580002246\"> </a></td><td>Abnormality of the duodenum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002250<a name=\"hpo-HP.580002250\"> </a></td><td>Abnormal large intestine morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002644<a name=\"hpo-HP.580002644\"> </a></td><td>Abnormality of pelvic girdle bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002664<a name=\"hpo-HP.580002664\"> </a></td><td>Neoplasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0002715<a name=\"hpo-HP.580002715\"> </a></td><td>Abnormality of the immune system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002814<a name=\"hpo-HP.580002814\"> </a></td><td>Abnormality of the lower limb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002817<a name=\"hpo-HP.580002817\"> </a></td><td>Abnormality of the upper limb</td></tr><tr><td style=\"white-space:nowrap\">HP:0005483<a name=\"hpo-HP.580005483\"> </a></td><td>Abnormal epiglottis morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008777<a name=\"hpo-HP.580008777\"> </a></td><td>Abnormal vocal cord morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011844<a name=\"hpo-HP.580011844\"> </a></td><td>Abnormal appendicular skeleton morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012732<a name=\"hpo-HP.580012732\"> </a></td><td>Anorectal anomaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001508<a name=\"hpo-HP.580001508\"> </a></td><td>Failure to thrive</td></tr><tr><td style=\"white-space:nowrap\">HP:0002902<a name=\"hpo-HP.580002902\"> </a></td><td>Hyponatremia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012236<a name=\"hpo-HP.580012236\"> </a></td><td>Elevated sweat chloride</td></tr><tr><td style=\"white-space:nowrap\">HP:0000347<a name=\"hpo-HP.580000347\"> </a></td><td>Micrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000926<a name=\"hpo-HP.580000926\"> </a></td><td>Platyspondyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001371<a name=\"hpo-HP.580001371\"> </a></td><td>Flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0001875<a name=\"hpo-HP.580001875\"> </a></td><td>Neutropenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001888<a name=\"hpo-HP.580001888\"> </a></td><td>Lymphopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002857<a name=\"hpo-HP.580002857\"> </a></td><td>Genu valgum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002986<a name=\"hpo-HP.580002986\"> </a></td><td>Radial bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003015<a name=\"hpo-HP.580003015\"> </a></td><td>Flared metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003025<a name=\"hpo-HP.580003025\"> </a></td><td>Metaphyseal irregularity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003097<a name=\"hpo-HP.580003097\"> </a></td><td>Short femur</td></tr><tr><td style=\"white-space:nowrap\">HP:0003300<a name=\"hpo-HP.580003300\"> </a></td><td>Ovoid vertebral bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0003307<a name=\"hpo-HP.580003307\"> </a></td><td>Hyperlordosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004209<a name=\"hpo-HP.580004209\"> </a></td><td>Clinodactyly of the 5th finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0004322<a name=\"hpo-HP.580004322\"> </a></td><td>Short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0005792<a name=\"hpo-HP.580005792\"> </a></td><td>Short humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0006248<a name=\"hpo-HP.580006248\"> </a></td><td>Limited wrist movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0000944<a name=\"hpo-HP.580000944\"> </a></td><td>Abnormality of the metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011921<a name=\"hpo-HP.580011921\"> </a></td><td>Exudative pleural effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0003043<a name=\"hpo-HP.580003043\"> </a></td><td>Abnormality of the shoulder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000290<a name=\"hpo-HP.580000290\"> </a></td><td>Abnormality of the forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0005288<a name=\"hpo-HP.580005288\"> </a></td><td>Abnormality of the nares</td></tr><tr><td style=\"white-space:nowrap\">HP:0000234<a name=\"hpo-HP.580000234\"> </a></td><td>Abnormality of the head</td></tr><tr><td style=\"white-space:nowrap\">HP:0004323<a name=\"hpo-HP.580004323\"> </a></td><td>Abnormality of body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000483<a name=\"hpo-HP.580000483\"> </a></td><td>Astigmatism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011003<a name=\"hpo-HP.580011003\"> </a></td><td>High myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000470<a name=\"hpo-HP.580000470\"> </a></td><td>Short neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0030044<a name=\"hpo-HP.580030044\"> </a></td><td>Flexion contracture of digit</td></tr><tr><td style=\"white-space:nowrap\">HP:0100871<a name=\"hpo-HP.580100871\"> </a></td><td>Abnormality of the palm</td></tr><tr><td style=\"white-space:nowrap\">HP:0004334<a name=\"hpo-HP.580004334\"> </a></td><td>Dermal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001845<a name=\"hpo-HP.580001845\"> </a></td><td>Overlapping toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000496<a name=\"hpo-HP.580000496\"> </a></td><td>Abnormality of eye movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0001780<a name=\"hpo-HP.580001780\"> </a></td><td>Abnormality of toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001626<a name=\"hpo-HP.580001626\"> </a></td><td>Abnormality of the cardiovascular system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002086<a name=\"hpo-HP.580002086\"> </a></td><td>Abnormality of the respiratory system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000818<a name=\"hpo-HP.580000818\"> </a></td><td>Abnormality of the endocrine system</td></tr><tr><td style=\"white-space:nowrap\">HP:0012372<a name=\"hpo-HP.580012372\"> </a></td><td>Abnormal eye morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009473<a name=\"hpo-HP.580009473\"> </a></td><td>Joint contracture of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0003199<a name=\"hpo-HP.580003199\"> </a></td><td>Decreased muscle mass</td></tr><tr><td style=\"white-space:nowrap\">HP:0003202<a name=\"hpo-HP.580003202\"> </a></td><td>Skeletal muscle atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003551<a name=\"hpo-HP.580003551\"> </a></td><td>Difficulty climbing stairs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002355<a name=\"hpo-HP.580002355\"> </a></td><td>Difficulty walking</td></tr><tr><td style=\"white-space:nowrap\">HP:0003546<a name=\"hpo-HP.580003546\"> </a></td><td>Exercise intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0003325<a name=\"hpo-HP.580003325\"> </a></td><td>Limb-girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003701<a name=\"hpo-HP.580003701\"> </a></td><td>Proximal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003547<a name=\"hpo-HP.580003547\"> </a></td><td>Shoulder girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0007340<a name=\"hpo-HP.580007340\"> </a></td><td>Lower limb muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002168<a name=\"hpo-HP.580002168\"> </a></td><td>Scanning speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0001265<a name=\"hpo-HP.580001265\"> </a></td><td>Hyporeflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001284<a name=\"hpo-HP.580001284\"> </a></td><td>Areflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003477<a name=\"hpo-HP.580003477\"> </a></td><td>Peripheral axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000924<a name=\"hpo-HP.580000924\"> </a></td><td>Abnormality of the skeletal system</td></tr><tr><td style=\"white-space:nowrap\">HP:0001291<a name=\"hpo-HP.580001291\"> </a></td><td>Abnormal cranial nerve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003687<a name=\"hpo-HP.580003687\"> </a></td><td>Centrally nucleated skeletal muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0001324<a name=\"hpo-HP.580001324\"> </a></td><td>Muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002515<a name=\"hpo-HP.580002515\"> </a></td><td>Waddling gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0100280<a name=\"hpo-HP.580100280\"> </a></td><td>Crohn's disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0002631<a name=\"hpo-HP.580002631\"> </a></td><td>obsolete Dilatation of ascending aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0100026<a name=\"hpo-HP.580100026\"> </a></td><td>Arteriovenous malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002637<a name=\"hpo-HP.580002637\"> </a></td><td>Cerebral ischemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002619<a name=\"hpo-HP.580002619\"> </a></td><td>Varicose veins</td></tr><tr><td style=\"white-space:nowrap\">HP:0001159<a name=\"hpo-HP.580001159\"> </a></td><td>Syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002069<a name=\"hpo-HP.580002069\"> </a></td><td>Bilateral tonic-clonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000977<a name=\"hpo-HP.580000977\"> </a></td><td>Soft skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010648<a name=\"hpo-HP.580010648\"> </a></td><td>Dermal translucency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000978<a name=\"hpo-HP.580000978\"> </a></td><td>Bruising susceptibility</td></tr><tr><td style=\"white-space:nowrap\">HP:0001956<a name=\"hpo-HP.580001956\"> </a></td><td>Truncal obesity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000189<a name=\"hpo-HP.580000189\"> </a></td><td>Narrow palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000678<a name=\"hpo-HP.580000678\"> </a></td><td>Dental crowding</td></tr><tr><td style=\"white-space:nowrap\">HP:0002870<a name=\"hpo-HP.580002870\"> </a></td><td>Obstructive sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001763<a name=\"hpo-HP.580001763\"> </a></td><td>Pes planus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000782<a name=\"hpo-HP.580000782\"> </a></td><td>Abnormality of the scapula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001600<a name=\"hpo-HP.580001600\"> </a></td><td>Abnormality of the larynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0002088<a name=\"hpo-HP.580002088\"> </a></td><td>Abnormal lung morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011407<a name=\"hpo-HP.580011407\"> </a></td><td>Proportionate tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0000541<a name=\"hpo-HP.580000541\"> </a></td><td>Retinal detachment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001373<a name=\"hpo-HP.580001373\"> </a></td><td>Joint dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000938<a name=\"hpo-HP.580000938\"> </a></td><td>Osteopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002942<a name=\"hpo-HP.580002942\"> </a></td><td>Thoracic kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001840<a name=\"hpo-HP.580001840\"> </a></td><td>Metatarsus adductus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001844<a name=\"hpo-HP.580001844\"> </a></td><td>Abnormality of the hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0001765<a name=\"hpo-HP.580001765\"> </a></td><td>Hammertoe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000606<a name=\"hpo-HP.580000606\"> </a></td><td>Abnormality of the periorbital region</td></tr><tr><td style=\"white-space:nowrap\">HP:0002757<a name=\"hpo-HP.580002757\"> </a></td><td>Recurrent fractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0000647<a name=\"hpo-HP.580000647\"> </a></td><td>Sclerocornea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001166<a name=\"hpo-HP.580001166\"> </a></td><td>Arachnodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005490<a name=\"hpo-HP.580005490\"> </a></td><td>Postnatal macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0011363<a name=\"hpo-HP.580011363\"> </a></td><td>Abnormality of hair growth rate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000276<a name=\"hpo-HP.580000276\"> </a></td><td>Long face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000275<a name=\"hpo-HP.580000275\"> </a></td><td>Narrow face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000337<a name=\"hpo-HP.580000337\"> </a></td><td>Broad forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0002267<a name=\"hpo-HP.580002267\"> </a></td><td>Exaggerated startle response</td></tr><tr><td style=\"white-space:nowrap\">HP:0002187<a name=\"hpo-HP.580002187\"> </a></td><td>Intellectual disability, profound</td></tr><tr><td style=\"white-space:nowrap\">HP:0000728<a name=\"hpo-HP.580000728\"> </a></td><td>Impaired ability to form peer relationships</td></tr><tr><td style=\"white-space:nowrap\">HP:0000733<a name=\"hpo-HP.580000733\"> </a></td><td>Stereotypy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000739<a name=\"hpo-HP.580000739\"> </a></td><td>Anxiety</td></tr><tr><td style=\"white-space:nowrap\">HP:0000929<a name=\"hpo-HP.580000929\"> </a></td><td>Abnormal skull morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001965<a name=\"hpo-HP.580001965\"> </a></td><td>Abnormal scalp morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100538<a name=\"hpo-HP.580100538\"> </a></td><td>Abnormality of the supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0000309<a name=\"hpo-HP.580000309\"> </a></td><td>Abnormality of the midface</td></tr><tr><td style=\"white-space:nowrap\">HP:0000277<a name=\"hpo-HP.580000277\"> </a></td><td>Abnormality of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000765<a name=\"hpo-HP.580000765\"> </a></td><td>Abnormality of the thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0100008<a name=\"hpo-HP.580100008\"> </a></td><td>Schwannoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0030038<a name=\"hpo-HP.580030038\"> </a></td><td>Enchondroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0100777<a name=\"hpo-HP.580100777\"> </a></td><td>Exostoses</td></tr><tr><td style=\"white-space:nowrap\">HP:0011663<a name=\"hpo-HP.580011663\"> </a></td><td>Right ventricular cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011675<a name=\"hpo-HP.580011675\"> </a></td><td>Arrhythmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001962<a name=\"hpo-HP.580001962\"> </a></td><td>Palpitations</td></tr><tr><td style=\"white-space:nowrap\">HP:0001279<a name=\"hpo-HP.580001279\"> </a></td><td>Syncope</td></tr><tr><td style=\"white-space:nowrap\">HP:0004756<a name=\"hpo-HP.580004756\"> </a></td><td>Ventricular tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000252<a name=\"hpo-HP.580000252\"> </a></td><td>Microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000303<a name=\"hpo-HP.580000303\"> </a></td><td>Mandibular prognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000664<a name=\"hpo-HP.580000664\"> </a></td><td>Synophrys</td></tr><tr><td style=\"white-space:nowrap\">HP:0001609<a name=\"hpo-HP.580001609\"> </a></td><td>Hoarse voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0002558<a name=\"hpo-HP.580002558\"> </a></td><td>Supernumerary nipple</td></tr><tr><td style=\"white-space:nowrap\">HP:0001634<a name=\"hpo-HP.580001634\"> </a></td><td>Mitral valve prolapse</td></tr><tr><td style=\"white-space:nowrap\">HP:0000028<a name=\"hpo-HP.580000028\"> </a></td><td>Cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000973<a name=\"hpo-HP.580000973\"> </a></td><td>Cutis laxa</td></tr><tr><td style=\"white-space:nowrap\">HP:0001518<a name=\"hpo-HP.580001518\"> </a></td><td>Small for gestational age</td></tr><tr><td style=\"white-space:nowrap\">HP:0000527<a name=\"hpo-HP.580000527\"> </a></td><td>Long eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002808<a name=\"hpo-HP.580002808\"> </a></td><td>Kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000248<a name=\"hpo-HP.580000248\"> </a></td><td>Brachycephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000505<a name=\"hpo-HP.580000505\"> </a></td><td>Visual impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000512<a name=\"hpo-HP.580000512\"> </a></td><td>Abnormal electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:0000517<a name=\"hpo-HP.580000517\"> </a></td><td>Abnormality of the lens</td></tr><tr><td style=\"white-space:nowrap\">HP:0000529<a name=\"hpo-HP.580000529\"> </a></td><td>Progressive visual loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0000586<a name=\"hpo-HP.580000586\"> </a></td><td>Shallow orbits</td></tr><tr><td style=\"white-space:nowrap\">HP:0000603<a name=\"hpo-HP.580000603\"> </a></td><td>Central scotoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000939<a name=\"hpo-HP.580000939\"> </a></td><td>Osteoporosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001377<a name=\"hpo-HP.580001377\"> </a></td><td>Limited elbow extension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001387<a name=\"hpo-HP.580001387\"> </a></td><td>Joint stiffness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001822<a name=\"hpo-HP.580001822\"> </a></td><td>Hallux valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0002657<a name=\"hpo-HP.580002657\"> </a></td><td>Spondylometaphyseal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003026<a name=\"hpo-HP.580003026\"> </a></td><td>Short long bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0006462<a name=\"hpo-HP.580006462\"> </a></td><td>Generalized bone demineralization</td></tr><tr><td style=\"white-space:nowrap\">HP:0008873<a name=\"hpo-HP.580008873\"> </a></td><td>Disproportionate short-limb short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0008905<a name=\"hpo-HP.580008905\"> </a></td><td>Rhizomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008922<a name=\"hpo-HP.580008922\"> </a></td><td>Childhood-onset short-trunk short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0200020<a name=\"hpo-HP.580200020\"> </a></td><td>Corneal erosion</td></tr><tr><td style=\"white-space:nowrap\">HP:0001172<a name=\"hpo-HP.580001172\"> </a></td><td>Abnormal thumb morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002286<a name=\"hpo-HP.580002286\"> </a></td><td>Fair hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0010719<a name=\"hpo-HP.580010719\"> </a></td><td>Abnormality of hair texture</td></tr><tr><td style=\"white-space:nowrap\">HP:0010720<a name=\"hpo-HP.580010720\"> </a></td><td>Abnormal hair pattern</td></tr><tr><td style=\"white-space:nowrap\">HP:0001635<a name=\"hpo-HP.580001635\"> </a></td><td>Congestive heart failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001644<a name=\"hpo-HP.580001644\"> </a></td><td>Dilated cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001663<a name=\"hpo-HP.580001663\"> </a></td><td>Ventricular fibrillation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011712<a name=\"hpo-HP.580011712\"> </a></td><td>Right bundle branch block</td></tr><tr><td style=\"white-space:nowrap\">HP:0000272<a name=\"hpo-HP.580000272\"> </a></td><td>Malar flattening</td></tr><tr><td style=\"white-space:nowrap\">HP:0000286<a name=\"hpo-HP.580000286\"> </a></td><td>Epicanthus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000322<a name=\"hpo-HP.580000322\"> </a></td><td>Short philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000463<a name=\"hpo-HP.580000463\"> </a></td><td>Anteverted nares</td></tr><tr><td style=\"white-space:nowrap\">HP:0000494<a name=\"hpo-HP.580000494\"> </a></td><td>Downslanted palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0000543<a name=\"hpo-HP.580000543\"> </a></td><td>Optic disc pallor</td></tr><tr><td style=\"white-space:nowrap\">HP:0000699<a name=\"hpo-HP.580000699\"> </a></td><td>Diastema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000773<a name=\"hpo-HP.580000773\"> </a></td><td>Short ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000887<a name=\"hpo-HP.580000887\"> </a></td><td>Cupped ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000946<a name=\"hpo-HP.580000946\"> </a></td><td>Hypoplastic ilia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000954<a name=\"hpo-HP.580000954\"> </a></td><td>Single transverse palmar crease</td></tr><tr><td style=\"white-space:nowrap\">HP:0001182<a name=\"hpo-HP.580001182\"> </a></td><td>Tapered finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0001537<a name=\"hpo-HP.580001537\"> </a></td><td>Umbilical hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002007<a name=\"hpo-HP.580002007\"> </a></td><td>Frontal bossing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002980<a name=\"hpo-HP.580002980\"> </a></td><td>Femoral bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002982<a name=\"hpo-HP.580002982\"> </a></td><td>Tibial bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003021<a name=\"hpo-HP.580003021\"> </a></td><td>Metaphyseal cupping</td></tr><tr><td style=\"white-space:nowrap\">HP:0005011<a name=\"hpo-HP.580005011\"> </a></td><td>Mesomelic arm shortening</td></tr><tr><td style=\"white-space:nowrap\">HP:0008803<a name=\"hpo-HP.580008803\"> </a></td><td>obsolete Narrow sacroiliac notch</td></tr><tr><td style=\"white-space:nowrap\">HP:0009117<a name=\"hpo-HP.580009117\"> </a></td><td>Aplasia/Hypoplasia of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0011220<a name=\"hpo-HP.580011220\"> </a></td><td>Prominent forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0012801<a name=\"hpo-HP.580012801\"> </a></td><td>Narrow jaw</td></tr><tr><td style=\"white-space:nowrap\">HP:0000243<a name=\"hpo-HP.580000243\"> </a></td><td>Trigonocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000358<a name=\"hpo-HP.580000358\"> </a></td><td>Posteriorly rotated ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0000411<a name=\"hpo-HP.580000411\"> </a></td><td>Protruding ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000646<a name=\"hpo-HP.580000646\"> </a></td><td>Amblyopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002812<a name=\"hpo-HP.580002812\"> </a></td><td>Coxa vara</td></tr><tr><td style=\"white-space:nowrap\">HP:0002970<a name=\"hpo-HP.580002970\"> </a></td><td>Genu varum</td></tr><tr><td style=\"white-space:nowrap\">HP:0012775<a name=\"hpo-HP.580012775\"> </a></td><td>Stellate iris</td></tr><tr><td style=\"white-space:nowrap\">HP:0000278<a name=\"hpo-HP.580000278\"> </a></td><td>Retrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0009796<a name=\"hpo-HP.580009796\"> </a></td><td>Branchial cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0002474<a name=\"hpo-HP.580002474\"> </a></td><td>Expressive language delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0007018<a name=\"hpo-HP.580007018\"> </a></td><td>Attention deficit hyperactivity disorder</td></tr><tr><td style=\"white-space:nowrap\">HP:0003198<a name=\"hpo-HP.580003198\"> </a></td><td>Myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003324<a name=\"hpo-HP.580003324\"> </a></td><td>Generalized muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003552<a name=\"hpo-HP.580003552\"> </a></td><td>Muscle stiffness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003554<a name=\"hpo-HP.580003554\"> </a></td><td>Type 2 muscle fiber atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003557<a name=\"hpo-HP.580003557\"> </a></td><td>Increased variability in muscle fiber diameter</td></tr><tr><td style=\"white-space:nowrap\">HP:0009025<a name=\"hpo-HP.580009025\"> </a></td><td>Increased connective tissue</td></tr><tr><td style=\"white-space:nowrap\">HP:0003635<a name=\"hpo-HP.580003635\"> </a></td><td>Loss of subcutaneous adipose tissue in limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002597<a name=\"hpo-HP.580002597\"> </a></td><td>Abnormality of the vasculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0001649<a name=\"hpo-HP.580001649\"> </a></td><td>Tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001638<a name=\"hpo-HP.580001638\"> </a></td><td>Cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001654<a name=\"hpo-HP.580001654\"> </a></td><td>Abnormal heart valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001671<a name=\"hpo-HP.580001671\"> </a></td><td>Abnormal cardiac septum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000103<a name=\"hpo-HP.580000103\"> </a></td><td>Polyuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0000114<a name=\"hpo-HP.580000114\"> </a></td><td>Proximal tubulopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001878<a name=\"hpo-HP.580001878\"> </a></td><td>Hemolytic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001931<a name=\"hpo-HP.580001931\"> </a></td><td>Hypochromic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001935<a name=\"hpo-HP.580001935\"> </a></td><td>Microcytic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001959<a name=\"hpo-HP.580001959\"> </a></td><td>Polydipsia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001994<a name=\"hpo-HP.580001994\"> </a></td><td>Renal Fanconi syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002134<a name=\"hpo-HP.580002134\"> </a></td><td>Abnormality of the basal ganglia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002188<a name=\"hpo-HP.580002188\"> </a></td><td>Delayed CNS myelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0002908<a name=\"hpo-HP.580002908\"> </a></td><td>Conjugated hyperbilirubinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003774<a name=\"hpo-HP.580003774\"> </a></td><td>Stage 5 chronic kidney disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0010700<a name=\"hpo-HP.580010700\"> </a></td><td>obsolete Total cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000193<a name=\"hpo-HP.580000193\"> </a></td><td>Bifid uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000219<a name=\"hpo-HP.580000219\"> </a></td><td>Thin upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000426<a name=\"hpo-HP.580000426\"> </a></td><td>Prominent nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000452<a name=\"hpo-HP.580000452\"> </a></td><td>Choanal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000490<a name=\"hpo-HP.580000490\"> </a></td><td>Deeply set eye</td></tr><tr><td style=\"white-space:nowrap\">HP:0000540<a name=\"hpo-HP.580000540\"> </a></td><td>Hypermetropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000579<a name=\"hpo-HP.580000579\"> </a></td><td>Nasolacrimal duct obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0000684<a name=\"hpo-HP.580000684\"> </a></td><td>Delayed eruption of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000960<a name=\"hpo-HP.580000960\"> </a></td><td>Sacral dimple</td></tr><tr><td style=\"white-space:nowrap\">HP:0000998<a name=\"hpo-HP.580000998\"> </a></td><td>Hypertrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001643<a name=\"hpo-HP.580001643\"> </a></td><td>Patent ductus arteriosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010813<a name=\"hpo-HP.580010813\"> </a></td><td>Abnormal number of hair whorls</td></tr><tr><td style=\"white-space:nowrap\">HP:0012384<a name=\"hpo-HP.580012384\"> </a></td><td>Rhinitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012745<a name=\"hpo-HP.580012745\"> </a></td><td>Short palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000359<a name=\"hpo-HP.580000359\"> </a></td><td>Abnormality of the inner ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000429<a name=\"hpo-HP.580000429\"> </a></td><td>Abnormality of the nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000436<a name=\"hpo-HP.580000436\"> </a></td><td>Abnormality of the nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000499<a name=\"hpo-HP.580000499\"> </a></td><td>Abnormal eyelash morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000534<a name=\"hpo-HP.580000534\"> </a></td><td>Abnormal eyebrow morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000951<a name=\"hpo-HP.580000951\"> </a></td><td>Abnormality of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001000<a name=\"hpo-HP.580001000\"> </a></td><td>Abnormality of skin pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001597<a name=\"hpo-HP.580001597\"> </a></td><td>Abnormality of the nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0006483<a name=\"hpo-HP.580006483\"> </a></td><td>Abnormal number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009929<a name=\"hpo-HP.580009929\"> </a></td><td>Abnormality of the columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0011119<a name=\"hpo-HP.580011119\"> </a></td><td>Abnormality of the nasal dorsum</td></tr><tr><td style=\"white-space:nowrap\">HP:0012808<a name=\"hpo-HP.580012808\"> </a></td><td>Abnormal nasal base</td></tr><tr><td style=\"white-space:nowrap\">HP:0100490<a name=\"hpo-HP.580100490\"> </a></td><td>Camptodactyly of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0000964<a name=\"hpo-HP.580000964\"> </a></td><td>Eczema</td></tr><tr><td style=\"white-space:nowrap\">HP:0004442<a name=\"hpo-HP.580004442\"> </a></td><td>Sagittal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000414<a name=\"hpo-HP.580000414\"> </a></td><td>Bulbous nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0003180<a name=\"hpo-HP.580003180\"> </a></td><td>Flat acetabular roof</td></tr><tr><td style=\"white-space:nowrap\">HP:0000422<a name=\"hpo-HP.580000422\"> </a></td><td>Abnormality of the nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000614<a name=\"hpo-HP.580000614\"> </a></td><td>Abnormal nasolacrimal system morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001167<a name=\"hpo-HP.580001167\"> </a></td><td>Abnormality of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0001595<a name=\"hpo-HP.580001595\"> </a></td><td>Abnormal hair morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012373<a name=\"hpo-HP.580012373\"> </a></td><td>Abnormal eye physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001655<a name=\"hpo-HP.580001655\"> </a></td><td>Patent foramen ovale</td></tr><tr><td style=\"white-space:nowrap\">HP:0001647<a name=\"hpo-HP.580001647\"> </a></td><td>Bicuspid aortic valve</td></tr><tr><td style=\"white-space:nowrap\">HP:0000574<a name=\"hpo-HP.580000574\"> </a></td><td>Thick eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0001169<a name=\"hpo-HP.580001169\"> </a></td><td>Broad palm</td></tr><tr><td style=\"white-space:nowrap\">HP:0006471<a name=\"hpo-HP.580006471\"> </a></td><td>Fixed elbow flexion</td></tr><tr><td style=\"white-space:nowrap\">HP:0008689<a name=\"hpo-HP.580008689\"> </a></td><td>Bilateral cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011304<a name=\"hpo-HP.580011304\"> </a></td><td>Broad thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0005110<a name=\"hpo-HP.580005110\"> </a></td><td>Atrial fibrillation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001633<a name=\"hpo-HP.580001633\"> </a></td><td>Abnormal mitral valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001641<a name=\"hpo-HP.580001641\"> </a></td><td>Abnormal pulmonary valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001702<a name=\"hpo-HP.580001702\"> </a></td><td>Abnormal tricuspid valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000012<a name=\"hpo-HP.580000012\"> </a></td><td>Urinary urgency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000020<a name=\"hpo-HP.580000020\"> </a></td><td>Urinary incontinence</td></tr><tr><td style=\"white-space:nowrap\">HP:0000131<a name=\"hpo-HP.580000131\"> </a></td><td>Uterine leiomyoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000132<a name=\"hpo-HP.580000132\"> </a></td><td>Menorrhagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000138<a name=\"hpo-HP.580000138\"> </a></td><td>Ovarian cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0000853<a name=\"hpo-HP.580000853\"> </a></td><td>Goiter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000953<a name=\"hpo-HP.580000953\"> </a></td><td>Hyperpigmentation of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001061<a name=\"hpo-HP.580001061\"> </a></td><td>Acne</td></tr><tr><td style=\"white-space:nowrap\">HP:0002315<a name=\"hpo-HP.580002315\"> </a></td><td>Headache</td></tr><tr><td style=\"white-space:nowrap\">HP:0004324<a name=\"hpo-HP.580004324\"> </a></td><td>Increased body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000069<a name=\"hpo-HP.580000069\"> </a></td><td>Abnormality of the ureter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000077<a name=\"hpo-HP.580000077\"> </a></td><td>Abnormality of the kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0000759<a name=\"hpo-HP.580000759\"> </a></td><td>Abnormal peripheral nervous system morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008069<a name=\"hpo-HP.580008069\"> </a></td><td>Neoplasm of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011276<a name=\"hpo-HP.580011276\"> </a></td><td>Vascular skin abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000705<a name=\"hpo-HP.580000705\"> </a></td><td>Amelogenesis imperfecta</td></tr><tr><td style=\"white-space:nowrap\">HP:0001256<a name=\"hpo-HP.580001256\"> </a></td><td>Intellectual disability, mild</td></tr><tr><td style=\"white-space:nowrap\">HP:0000325<a name=\"hpo-HP.580000325\"> </a></td><td>Triangular face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000160<a name=\"hpo-HP.580000160\"> </a></td><td>Narrow mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009487<a name=\"hpo-HP.580009487\"> </a></td><td>Ulnar deviation of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0001249<a name=\"hpo-HP.580001249\"> </a></td><td>Intellectual disability</td></tr><tr><td style=\"white-space:nowrap\">HP:0008064<a name=\"hpo-HP.580008064\"> </a></td><td>Ichthyosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000311<a name=\"hpo-HP.580000311\"> </a></td><td>Round face</td></tr><tr><td style=\"white-space:nowrap\">HP:0001653<a name=\"hpo-HP.580001653\"> </a></td><td>Mitral regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001771<a name=\"hpo-HP.580001771\"> </a></td><td>Achilles tendon contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0012032<a name=\"hpo-HP.580012032\"> </a></td><td>Lipoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0012368<a name=\"hpo-HP.580012368\"> </a></td><td>Flat face</td></tr><tr><td style=\"white-space:nowrap\">HP:0030053<a name=\"hpo-HP.580030053\"> </a></td><td>Stiff skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011124<a name=\"hpo-HP.580011124\"> </a></td><td>Abnormality of epidermal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011097<a name=\"hpo-HP.580011097\"> </a></td><td>Epileptic spasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000407<a name=\"hpo-HP.580000407\"> </a></td><td>Sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000331<a name=\"hpo-HP.580000331\"> </a></td><td>Short chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000340<a name=\"hpo-HP.580000340\"> </a></td><td>Sloping forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0000486<a name=\"hpo-HP.580000486\"> </a></td><td>Strabismus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000713<a name=\"hpo-HP.580000713\"> </a></td><td>Agitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000802<a name=\"hpo-HP.580000802\"> </a></td><td>Impotence</td></tr><tr><td style=\"white-space:nowrap\">HP:0001272<a name=\"hpo-HP.580001272\"> </a></td><td>Cerebellar atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001276<a name=\"hpo-HP.580001276\"> </a></td><td>Hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001321<a name=\"hpo-HP.580001321\"> </a></td><td>Cerebellar hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001322<a name=\"hpo-HP.580001322\"> </a></td><td>obsolete Brain very small</td></tr><tr><td style=\"white-space:nowrap\">HP:0002061<a name=\"hpo-HP.580002061\"> </a></td><td>Lower limb spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002529<a name=\"hpo-HP.580002529\"> </a></td><td>Neuronal loss in central nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002540<a name=\"hpo-HP.580002540\"> </a></td><td>Inability to walk</td></tr><tr><td style=\"white-space:nowrap\">HP:0005484<a name=\"hpo-HP.580005484\"> </a></td><td>Postnatal microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0012850<a name=\"hpo-HP.580012850\"> </a></td><td>Small intestinal dysmotility</td></tr><tr><td style=\"white-space:nowrap\">HP:0000504<a name=\"hpo-HP.580000504\"> </a></td><td>Abnormality of vision</td></tr><tr><td style=\"white-space:nowrap\">HP:0002118<a name=\"hpo-HP.580002118\"> </a></td><td>Abnormality of the cerebral ventricles</td></tr><tr><td style=\"white-space:nowrap\">HP:0002363<a name=\"hpo-HP.580002363\"> </a></td><td>Abnormality of brainstem morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0010651<a name=\"hpo-HP.580010651\"> </a></td><td>Abnormal meningeal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100024<a name=\"hpo-HP.580100024\"> </a></td><td>Conspicuously happy disposition</td></tr><tr><td style=\"white-space:nowrap\">HP:0002538<a name=\"hpo-HP.580002538\"> </a></td><td>Abnormality of the cerebral cortex</td></tr><tr><td style=\"white-space:nowrap\">HP:0000054<a name=\"hpo-HP.580000054\"> </a></td><td>Micropenis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000215<a name=\"hpo-HP.580000215\"> </a></td><td>Thick upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000293<a name=\"hpo-HP.580000293\"> </a></td><td>Full cheeks</td></tr><tr><td style=\"white-space:nowrap\">HP:0000349<a name=\"hpo-HP.580000349\"> </a></td><td>Widow's peak</td></tr><tr><td style=\"white-space:nowrap\">HP:0000444<a name=\"hpo-HP.580000444\"> </a></td><td>Convex nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000506<a name=\"hpo-HP.580000506\"> </a></td><td>Telecanthus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000592<a name=\"hpo-HP.580000592\"> </a></td><td>Blue sclerae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000691<a name=\"hpo-HP.580000691\"> </a></td><td>Microdontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000698<a name=\"hpo-HP.580000698\"> </a></td><td>Conical tooth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002000<a name=\"hpo-HP.580002000\"> </a></td><td>Short columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0002097<a name=\"hpo-HP.580002097\"> </a></td><td>Emphysema</td></tr><tr><td style=\"white-space:nowrap\">HP:0002209<a name=\"hpo-HP.580002209\"> </a></td><td>Sparse scalp hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002816<a name=\"hpo-HP.580002816\"> </a></td><td>Genu recurvatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0005116<a name=\"hpo-HP.580005116\"> </a></td><td>Arterial tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0007957<a name=\"hpo-HP.580007957\"> </a></td><td>Corneal opacity</td></tr><tr><td style=\"white-space:nowrap\">HP:0008070<a name=\"hpo-HP.580008070\"> </a></td><td>Sparse hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0009623<a name=\"hpo-HP.580009623\"> </a></td><td>Proximal placement of thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0010055<a name=\"hpo-HP.580010055\"> </a></td><td>Broad hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0011318<a name=\"hpo-HP.580011318\"> </a></td><td>Bicoronal synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011968<a name=\"hpo-HP.580011968\"> </a></td><td>Feeding difficulties</td></tr><tr><td style=\"white-space:nowrap\">HP:0200067<a name=\"hpo-HP.580200067\"> </a></td><td>Recurrent spontaneous abortion</td></tr><tr><td style=\"white-space:nowrap\">HP:0011819<a name=\"hpo-HP.580011819\"> </a></td><td>Submucous cleft soft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000268<a name=\"hpo-HP.580000268\"> </a></td><td>Dolichocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0003302<a name=\"hpo-HP.580003302\"> </a></td><td>Spondylolisthesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000582<a name=\"hpo-HP.580000582\"> </a></td><td>Upslanted palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000952<a name=\"hpo-HP.580000952\"> </a></td><td>Jaundice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001298<a name=\"hpo-HP.580001298\"> </a></td><td>Encephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001396<a name=\"hpo-HP.580001396\"> </a></td><td>Cholestasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002059<a name=\"hpo-HP.580002059\"> </a></td><td>Cerebral atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002171<a name=\"hpo-HP.580002171\"> </a></td><td>Gliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002240<a name=\"hpo-HP.580002240\"> </a></td><td>Hepatomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002353<a name=\"hpo-HP.580002353\"> </a></td><td>EEG abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0002446<a name=\"hpo-HP.580002446\"> </a></td><td>Astrocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003287<a name=\"hpo-HP.580003287\"> </a></td><td>Abnormality of mitochondrial metabolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011449<a name=\"hpo-HP.580011449\"> </a></td><td>Knee clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012852<a name=\"hpo-HP.580012852\"> </a></td><td>Hepatic bridging fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100626<a name=\"hpo-HP.580100626\"> </a></td><td>Chronic hepatic failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000385<a name=\"hpo-HP.580000385\"> </a></td><td>Small earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0009748<a name=\"hpo-HP.580009748\"> </a></td><td>Large earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000157<a name=\"hpo-HP.580000157\"> </a></td><td>Abnormality of the tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0000172<a name=\"hpo-HP.580000172\"> </a></td><td>Abnormality of the uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000174<a name=\"hpo-HP.580000174\"> </a></td><td>Abnormal palate morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000306<a name=\"hpo-HP.580000306\"> </a></td><td>Abnormality of the chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0004408<a name=\"hpo-HP.580004408\"> </a></td><td>Abnormality of the sense of smell</td></tr><tr><td style=\"white-space:nowrap\">HP:0009912<a name=\"hpo-HP.580009912\"> </a></td><td>Abnormality of the tragus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000537<a name=\"hpo-HP.580000537\"> </a></td><td>Epicanthus inversus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000565<a name=\"hpo-HP.580000565\"> </a></td><td>Esotropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000752<a name=\"hpo-HP.580000752\"> </a></td><td>Hyperactivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003186<a name=\"hpo-HP.580003186\"> </a></td><td>Inverted nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0012503<a name=\"hpo-HP.580012503\"> </a></td><td>Abnormality of the pituitary gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0100710<a name=\"hpo-HP.580100710\"> </a></td><td>Impulsivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000357<a name=\"hpo-HP.580000357\"> </a></td><td>Abnormal location of ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0000820<a name=\"hpo-HP.580000820\"> </a></td><td>Abnormality of the thyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000828<a name=\"hpo-HP.580000828\"> </a></td><td>Abnormality of the parathyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000834<a name=\"hpo-HP.580000834\"> </a></td><td>Abnormality of the adrenal glands</td></tr><tr><td style=\"white-space:nowrap\">HP:0012093<a name=\"hpo-HP.580012093\"> </a></td><td>Abnormality of endocrine pancreas physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000269<a name=\"hpo-HP.580000269\"> </a></td><td>Prominent occiput</td></tr><tr><td style=\"white-space:nowrap\">HP:0000535<a name=\"hpo-HP.580000535\"> </a></td><td>Sparse and thin eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000639<a name=\"hpo-HP.580000639\"> </a></td><td>Nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000718<a name=\"hpo-HP.580000718\"> </a></td><td>Aggressive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000957<a name=\"hpo-HP.580000957\"> </a></td><td>Cafe-au-lait spot</td></tr><tr><td style=\"white-space:nowrap\">HP:0000256<a name=\"hpo-HP.580000256\"> </a></td><td>Macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000750<a name=\"hpo-HP.580000750\"> </a></td><td>Delayed speech and language development</td></tr><tr><td style=\"white-space:nowrap\">HP:0000963<a name=\"hpo-HP.580000963\"> </a></td><td>Thin skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001260<a name=\"hpo-HP.580001260\"> </a></td><td>Dysarthria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002194<a name=\"hpo-HP.580002194\"> </a></td><td>Delayed gross motor development</td></tr><tr><td style=\"white-space:nowrap\">HP:0003196<a name=\"hpo-HP.580003196\"> </a></td><td>Short nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0001155<a name=\"hpo-HP.580001155\"> </a></td><td>Abnormality of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0100022<a name=\"hpo-HP.580100022\"> </a></td><td>Abnormality of movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010862<a name=\"hpo-HP.580010862\"> </a></td><td>Delayed fine motor development</td></tr><tr><td style=\"white-space:nowrap\">HP:0000343<a name=\"hpo-HP.580000343\"> </a></td><td>Long philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000717<a name=\"hpo-HP.580000717\"> </a></td><td>Autism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001883<a name=\"hpo-HP.580001883\"> </a></td><td>Talipes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002553<a name=\"hpo-HP.580002553\"> </a></td><td>Highly arched eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0007488<a name=\"hpo-HP.580007488\"> </a></td><td>Diffuse skin atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000822<a name=\"hpo-HP.580000822\"> </a></td><td>Hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001278<a name=\"hpo-HP.580001278\"> </a></td><td>Orthostatic hypotension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001944<a name=\"hpo-HP.580001944\"> </a></td><td>Dehydration</td></tr><tr><td style=\"white-space:nowrap\">HP:0001945<a name=\"hpo-HP.580001945\"> </a></td><td>Fever</td></tr><tr><td style=\"white-space:nowrap\">HP:0002019<a name=\"hpo-HP.580002019\"> </a></td><td>Constipation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002020<a name=\"hpo-HP.580002020\"> </a></td><td>Gastroesophageal reflux</td></tr><tr><td style=\"white-space:nowrap\">HP:0002027<a name=\"hpo-HP.580002027\"> </a></td><td>Abdominal pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0002718<a name=\"hpo-HP.580002718\"> </a></td><td>Recurrent bacterial infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0002841<a name=\"hpo-HP.580002841\"> </a></td><td>Recurrent fungal infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0004395<a name=\"hpo-HP.580004395\"> </a></td><td>Malnutrition</td></tr><tr><td style=\"white-space:nowrap\">HP:0009830<a name=\"hpo-HP.580009830\"> </a></td><td>Peripheral neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000126<a name=\"hpo-HP.580000126\"> </a></td><td>Hydronephrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000519<a name=\"hpo-HP.580000519\"> </a></td><td>Developmental cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000648<a name=\"hpo-HP.580000648\"> </a></td><td>Optic atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001053<a name=\"hpo-HP.580001053\"> </a></td><td>Hypopigmented skin patches</td></tr><tr><td style=\"white-space:nowrap\">HP:0001087<a name=\"hpo-HP.580001087\"> </a></td><td>Developmental glaucoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0002119<a name=\"hpo-HP.580002119\"> </a></td><td>Ventriculomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002280<a name=\"hpo-HP.580002280\"> </a></td><td>Enlarged cisterna magna</td></tr><tr><td style=\"white-space:nowrap\">HP:0003298<a name=\"hpo-HP.580003298\"> </a></td><td>Spina bifida occulta</td></tr><tr><td style=\"white-space:nowrap\">HP:0004467<a name=\"hpo-HP.580004467\"> </a></td><td>Preauricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0008511<a name=\"hpo-HP.580008511\"> </a></td><td>Central posterior corneal opacity</td></tr><tr><td style=\"white-space:nowrap\">HP:0010780<a name=\"hpo-HP.580010780\"> </a></td><td>Hyperacusis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030048<a name=\"hpo-HP.580030048\"> </a></td><td>Colpocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0100335<a name=\"hpo-HP.580100335\"> </a></td><td>Non-midline cleft lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000525<a name=\"hpo-HP.580000525\"> </a></td><td>Abnormality iris morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002719<a name=\"hpo-HP.580002719\"> </a></td><td>Recurrent infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0000153<a name=\"hpo-HP.580000153\"> </a></td><td>Abnormality of the mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001903<a name=\"hpo-HP.580001903\"> </a></td><td>Anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002094<a name=\"hpo-HP.580002094\"> </a></td><td>Dyspnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002206<a name=\"hpo-HP.580002206\"> </a></td><td>Pulmonary fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002789<a name=\"hpo-HP.580002789\"> </a></td><td>Tachypnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002793<a name=\"hpo-HP.580002793\"> </a></td><td>Abnormal pattern of respiration</td></tr><tr><td style=\"white-space:nowrap\">HP:0003565<a name=\"hpo-HP.580003565\"> </a></td><td>Elevated erythrocyte sedimentation rate</td></tr><tr><td style=\"white-space:nowrap\">HP:0006517<a name=\"hpo-HP.580006517\"> </a></td><td>Intraalveolar phospholipid accumulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0006530<a name=\"hpo-HP.580006530\"> </a></td><td>Interstitial pulmonary abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0100759<a name=\"hpo-HP.580100759\"> </a></td><td>Clubbing of fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0002103<a name=\"hpo-HP.580002103\"> </a></td><td>Abnormal pleura morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001596<a name=\"hpo-HP.580001596\"> </a></td><td>Alopecia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001882<a name=\"hpo-HP.580001882\"> </a></td><td>Leukopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002013<a name=\"hpo-HP.580002013\"> </a></td><td>Vomiting</td></tr><tr><td style=\"white-space:nowrap\">HP:0002028<a name=\"hpo-HP.580002028\"> </a></td><td>Chronic diarrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002573<a name=\"hpo-HP.580002573\"> </a></td><td>Hematochezia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002960<a name=\"hpo-HP.580002960\"> </a></td><td>Autoimmunity</td></tr><tr><td style=\"white-space:nowrap\">HP:0005387<a name=\"hpo-HP.580005387\"> </a></td><td>Combined immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0011109<a name=\"hpo-HP.580011109\"> </a></td><td>Chronic sinusitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004429<a name=\"hpo-HP.580004429\"> </a></td><td>Recurrent viral infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0000280<a name=\"hpo-HP.580000280\"> </a></td><td>Coarse facial features</td></tr><tr><td style=\"white-space:nowrap\">HP:0000294<a name=\"hpo-HP.580000294\"> </a></td><td>Low anterior hairline</td></tr><tr><td style=\"white-space:nowrap\">HP:0000577<a name=\"hpo-HP.580000577\"> </a></td><td>Exotropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001873<a name=\"hpo-HP.580001873\"> </a></td><td>Thrombocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002011<a name=\"hpo-HP.580002011\"> </a></td><td>Morphological central nervous system abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0006610<a name=\"hpo-HP.580006610\"> </a></td><td>Wide intermamillary distance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011231<a name=\"hpo-HP.580011231\"> </a></td><td>Prominent eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0012718<a name=\"hpo-HP.580012718\"> </a></td><td>Morphological abnormality of the gastrointestinal tract</td></tr><tr><td style=\"white-space:nowrap\">HP:0002024<a name=\"hpo-HP.580002024\"> </a></td><td>Malabsorption</td></tr><tr><td style=\"white-space:nowrap\">HP:0001394<a name=\"hpo-HP.580001394\"> </a></td><td>Cirrhosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001414<a name=\"hpo-HP.580001414\"> </a></td><td>Microvesicular hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001403<a name=\"hpo-HP.580001403\"> </a></td><td>Macrovesicular hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001410<a name=\"hpo-HP.580001410\"> </a></td><td>Decreased liver function</td></tr><tr><td style=\"white-space:nowrap\">HP:0001409<a name=\"hpo-HP.580001409\"> </a></td><td>Portal hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001744<a name=\"hpo-HP.580001744\"> </a></td><td>Splenomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0003394<a name=\"hpo-HP.580003394\"> </a></td><td>Muscle spasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003750<a name=\"hpo-HP.580003750\"> </a></td><td>Increased muscle fatiguability</td></tr><tr><td style=\"white-space:nowrap\">HP:0002123<a name=\"hpo-HP.580002123\"> </a></td><td>Generalized myoclonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0002219<a name=\"hpo-HP.580002219\"> </a></td><td>Facial hypertrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000831<a name=\"hpo-HP.580000831\"> </a></td><td>Insulin-resistant diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001891<a name=\"hpo-HP.580001891\"> </a></td><td>Iron deficiency anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001264<a name=\"hpo-HP.580001264\"> </a></td><td>Spastic diplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002313<a name=\"hpo-HP.580002313\"> </a></td><td>Spastic paraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001347<a name=\"hpo-HP.580001347\"> </a></td><td>Hyperreflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002460<a name=\"hpo-HP.580002460\"> </a></td><td>Distal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000763<a name=\"hpo-HP.580000763\"> </a></td><td>Sensory neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001268<a name=\"hpo-HP.580001268\"> </a></td><td>Mental deterioration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002169<a name=\"hpo-HP.580002169\"> </a></td><td>Clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001332<a name=\"hpo-HP.580001332\"> </a></td><td>Dystonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100716<a name=\"hpo-HP.580100716\"> </a></td><td>Self-injurious behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000602<a name=\"hpo-HP.580000602\"> </a></td><td>Ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001251<a name=\"hpo-HP.580001251\"> </a></td><td>Ataxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000776<a name=\"hpo-HP.580000776\"> </a></td><td>Congenital diaphragmatic hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000410<a name=\"hpo-HP.580000410\"> </a></td><td>Mixed hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000510<a name=\"hpo-HP.580000510\"> </a></td><td>Rod-cone dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0004437<a name=\"hpo-HP.580004437\"> </a></td><td>Cranial hyperostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011001<a name=\"hpo-HP.580011001\"> </a></td><td>Increased bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0000956<a name=\"hpo-HP.580000956\"> </a></td><td>Acanthosis nigricans</td></tr><tr><td style=\"white-space:nowrap\">HP:0000958<a name=\"hpo-HP.580000958\"> </a></td><td>Dry skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000580<a name=\"hpo-HP.580000580\"> </a></td><td>Pigmentary retinopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000649<a name=\"hpo-HP.580000649\"> </a></td><td>Abnormality of visual evoked potentials</td></tr><tr><td style=\"white-space:nowrap\">HP:0000657<a name=\"hpo-HP.580000657\"> </a></td><td>Oculomotor apraxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000479<a name=\"hpo-HP.580000479\"> </a></td><td>Abnormal retinal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001317<a name=\"hpo-HP.580001317\"> </a></td><td>Abnormal cerebellum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001533<a name=\"hpo-HP.580001533\"> </a></td><td>Slender build</td></tr><tr><td style=\"white-space:nowrap\">HP:0001629<a name=\"hpo-HP.580001629\"> </a></td><td>Ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0000703<a name=\"hpo-HP.580000703\"> </a></td><td>Dentinogenesis imperfecta</td></tr><tr><td style=\"white-space:nowrap\">HP:0000914<a name=\"hpo-HP.580000914\"> </a></td><td>Shield chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0001500<a name=\"hpo-HP.580001500\"> </a></td><td>Broad finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0003086<a name=\"hpo-HP.580003086\"> </a></td><td>Acromesomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003416<a name=\"hpo-HP.580003416\"> </a></td><td>Spinal canal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002815<a name=\"hpo-HP.580002815\"> </a></td><td>Abnormality of the knee</td></tr><tr><td style=\"white-space:nowrap\">HP:0002992<a name=\"hpo-HP.580002992\"> </a></td><td>Abnormality of tibia morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001639<a name=\"hpo-HP.580001639\"> </a></td><td>Hypertrophic cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003236<a name=\"hpo-HP.580003236\"> </a></td><td>Elevated serum creatine kinase</td></tr><tr><td style=\"white-space:nowrap\">HP:0001369<a name=\"hpo-HP.580001369\"> </a></td><td>Arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003560<a name=\"hpo-HP.580003560\"> </a></td><td>Muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003974<a name=\"hpo-HP.580003974\"> </a></td><td>Absent radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0002818<a name=\"hpo-HP.580002818\"> </a></td><td>Abnormality of the radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0001561<a name=\"hpo-HP.580001561\"> </a></td><td>Polyhydramnios</td></tr><tr><td style=\"white-space:nowrap\">HP:0002299<a name=\"hpo-HP.580002299\"> </a></td><td>Brittle hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002208<a name=\"hpo-HP.580002208\"> </a></td><td>Coarse hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002213<a name=\"hpo-HP.580002213\"> </a></td><td>Fine hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000522<a name=\"hpo-HP.580000522\"> </a></td><td>Alacrima</td></tr><tr><td style=\"white-space:nowrap\">HP:0100704<a name=\"hpo-HP.580100704\"> </a></td><td>Cerebral visual impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0012713<a name=\"hpo-HP.580012713\"> </a></td><td>Moderate hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002307<a name=\"hpo-HP.580002307\"> </a></td><td>Drooling</td></tr><tr><td style=\"white-space:nowrap\">HP:0002714<a name=\"hpo-HP.580002714\"> </a></td><td>Downturned corners of mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000191<a name=\"hpo-HP.580000191\"> </a></td><td>Accessory oral frenulum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000158<a name=\"hpo-HP.580000158\"> </a></td><td>Macroglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012020<a name=\"hpo-HP.580012020\"> </a></td><td>Right aortic arch</td></tr><tr><td style=\"white-space:nowrap\">HP:0002104<a name=\"hpo-HP.580002104\"> </a></td><td>Apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0000598<a name=\"hpo-HP.580000598\"> </a></td><td>Abnormality of the ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0007874<a name=\"hpo-HP.580007874\"> </a></td><td>Almond-shaped palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0010804<a name=\"hpo-HP.580010804\"> </a></td><td>Tented upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000885<a name=\"hpo-HP.580000885\"> </a></td><td>Broad ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000768<a name=\"hpo-HP.580000768\"> </a></td><td>Pectus carinatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001680<a name=\"hpo-HP.580001680\"> </a></td><td>Coarctation of aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0000687<a name=\"hpo-HP.580000687\"> </a></td><td>Widely spaced teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000047<a name=\"hpo-HP.580000047\"> </a></td><td>Hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0001943<a name=\"hpo-HP.580001943\"> </a></td><td>Hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012369<a name=\"hpo-HP.580012369\"> </a></td><td>Abnormality of malar bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0009900<a name=\"hpo-HP.580009900\"> </a></td><td>Unilateral deafness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000023<a name=\"hpo-HP.580000023\"> </a></td><td>Inguinal hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000074<a name=\"hpo-HP.580000074\"> </a></td><td>Ureteropelvic junction obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001800<a name=\"hpo-HP.580001800\"> </a></td><td>Hypoplastic toenails</td></tr><tr><td style=\"white-space:nowrap\">HP:0001804<a name=\"hpo-HP.580001804\"> </a></td><td>Hypoplastic fingernail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002949<a name=\"hpo-HP.580002949\"> </a></td><td>Fused cervical vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0008050<a name=\"hpo-HP.580008050\"> </a></td><td>Abnormality of the palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0008577<a name=\"hpo-HP.580008577\"> </a></td><td>Underfolded helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0008589<a name=\"hpo-HP.580008589\"> </a></td><td>Hypoplastic helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0010863<a name=\"hpo-HP.580010863\"> </a></td><td>Receptive language delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0002282<a name=\"hpo-HP.580002282\"> </a></td><td>Gray matter heterotopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002085<a name=\"hpo-HP.580002085\"> </a></td><td>Occipital encephalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0001057<a name=\"hpo-HP.580001057\"> </a></td><td>Aplasia cutis congenita</td></tr><tr><td style=\"white-space:nowrap\">HP:0000211<a name=\"hpo-HP.580000211\"> </a></td><td>Trismus</td></tr><tr><td style=\"white-space:nowrap\">HP:0008422<a name=\"hpo-HP.580008422\"> </a></td><td>Vertebral wedging</td></tr><tr><td style=\"white-space:nowrap\">HP:0003170<a name=\"hpo-HP.580003170\"> </a></td><td>Abnormality of the acetabulum</td></tr><tr><td style=\"white-space:nowrap\">HP:0003272<a name=\"hpo-HP.580003272\"> </a></td><td>Abnormality of the hip bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0003028<a name=\"hpo-HP.580003028\"> </a></td><td>Abnormality of the ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0003301<a name=\"hpo-HP.580003301\"> </a></td><td>Irregular vertebral endplates</td></tr><tr><td style=\"white-space:nowrap\">HP:0010508<a name=\"hpo-HP.580010508\"> </a></td><td>Metatarsus valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0009811<a name=\"hpo-HP.580009811\"> </a></td><td>Abnormality of the elbow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000736<a name=\"hpo-HP.580000736\"> </a></td><td>Short attention span</td></tr><tr><td style=\"white-space:nowrap\">HP:0002912<a name=\"hpo-HP.580002912\"> </a></td><td>Methylmalonic acidemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001941<a name=\"hpo-HP.580001941\"> </a></td><td>Acidosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001992<a name=\"hpo-HP.580001992\"> </a></td><td>Organic aciduria</td></tr><tr><td style=\"white-space:nowrap\">HP:0009027<a name=\"hpo-HP.580009027\"> </a></td><td>Foot dorsiflexor weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002063<a name=\"hpo-HP.580002063\"> </a></td><td>Rigidity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000384<a name=\"hpo-HP.580000384\"> </a></td><td>Preauricular skin tag</td></tr><tr><td style=\"white-space:nowrap\">HP:0200046<a name=\"hpo-HP.580200046\"> </a></td><td>Cat cry</td></tr><tr><td style=\"white-space:nowrap\">HP:0001357<a name=\"hpo-HP.580001357\"> </a></td><td>Plagiocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000670<a name=\"hpo-HP.580000670\"> </a></td><td>Carious teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0011090<a name=\"hpo-HP.580011090\"> </a></td><td>Fused teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0012810<a name=\"hpo-HP.580012810\"> </a></td><td>Wide nasal base</td></tr><tr><td style=\"white-space:nowrap\">HP:0010296<a name=\"hpo-HP.580010296\"> </a></td><td>Ankyloglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001636<a name=\"hpo-HP.580001636\"> </a></td><td>Tetralogy of Fallot</td></tr><tr><td style=\"white-space:nowrap\">HP:0001305<a name=\"hpo-HP.580001305\"> </a></td><td>Dandy-Walker malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000238<a name=\"hpo-HP.580000238\"> </a></td><td>Hydrocephalus</td></tr><tr><td style=\"white-space:nowrap\">HP:0005469<a name=\"hpo-HP.580005469\"> </a></td><td>Flat occiput</td></tr><tr><td style=\"white-space:nowrap\">HP:0000270<a name=\"hpo-HP.580000270\"> </a></td><td>Delayed cranial suture closure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000239<a name=\"hpo-HP.580000239\"> </a></td><td>Large fontanelles</td></tr><tr><td style=\"white-space:nowrap\">HP:0010537<a name=\"hpo-HP.580010537\"> </a></td><td>Wide cranial sutures</td></tr><tr><td style=\"white-space:nowrap\">HP:0002217<a name=\"hpo-HP.580002217\"> </a></td><td>Slow-growing hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000587<a name=\"hpo-HP.580000587\"> </a></td><td>Abnormality of the optic nerve</td></tr><tr><td style=\"white-space:nowrap\">HP:0005989<a name=\"hpo-HP.580005989\"> </a></td><td>Redundant neck skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010775<a name=\"hpo-HP.580010775\"> </a></td><td>Vascular ring</td></tr><tr><td style=\"white-space:nowrap\">HP:0002779<a name=\"hpo-HP.580002779\"> </a></td><td>Tracheomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002827<a name=\"hpo-HP.580002827\"> </a></td><td>Hip dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001302<a name=\"hpo-HP.580001302\"> </a></td><td>Pachygyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0007362<a name=\"hpo-HP.580007362\"> </a></td><td>Aplasia/Hypoplasia of the brainstem</td></tr><tr><td style=\"white-space:nowrap\">HP:0001558<a name=\"hpo-HP.580001558\"> </a></td><td>Decreased fetal movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010878<a name=\"hpo-HP.580010878\"> </a></td><td>Fetal cystic hygroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0011398<a name=\"hpo-HP.580011398\"> </a></td><td>Central hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002071<a name=\"hpo-HP.580002071\"> </a></td><td>Abnormality of extrapyramidal motor function</td></tr><tr><td style=\"white-space:nowrap\">HP:0000826<a name=\"hpo-HP.580000826\"> </a></td><td>Precocious puberty</td></tr><tr><td style=\"white-space:nowrap\">HP:0000014<a name=\"hpo-HP.580000014\"> </a></td><td>Abnormality of the bladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0005037<a name=\"hpo-HP.580005037\"> </a></td><td>Proximal radio-ulnar synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100543<a name=\"hpo-HP.580100543\"> </a></td><td>Cognitive impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000481<a name=\"hpo-HP.580000481\"> </a></td><td>Abnormal cornea morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000076<a name=\"hpo-HP.580000076\"> </a></td><td>Vesicoureteral reflux</td></tr><tr><td style=\"white-space:nowrap\">HP:0000297<a name=\"hpo-HP.580000297\"> </a></td><td>Facial hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000391<a name=\"hpo-HP.580000391\"> </a></td><td>Thickened helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0001162<a name=\"hpo-HP.580001162\"> </a></td><td>Postaxial hand polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001385<a name=\"hpo-HP.580001385\"> </a></td><td>Hip dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002342<a name=\"hpo-HP.580002342\"> </a></td><td>Intellectual disability, moderate</td></tr><tr><td style=\"white-space:nowrap\">HP:0003191<a name=\"hpo-HP.580003191\"> </a></td><td>Cleft ala nasi</td></tr><tr><td style=\"white-space:nowrap\">HP:0009765<a name=\"hpo-HP.580009765\"> </a></td><td>Low hanging columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0010297<a name=\"hpo-HP.580010297\"> </a></td><td>Bifid tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0011330<a name=\"hpo-HP.580011330\"> </a></td><td>Metopic synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012804<a name=\"hpo-HP.580012804\"> </a></td><td>Corneal ulceration</td></tr><tr><td style=\"white-space:nowrap\">HP:0010485<a name=\"hpo-HP.580010485\"> </a></td><td>Hyperextensibility at elbow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000609<a name=\"hpo-HP.580000609\"> </a></td><td>Optic nerve hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001176<a name=\"hpo-HP.580001176\"> </a></td><td>Large hands</td></tr><tr><td style=\"white-space:nowrap\">HP:0004233<a name=\"hpo-HP.580004233\"> </a></td><td>Advanced ossification of carpal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0100842<a name=\"hpo-HP.580100842\"> </a></td><td>Septo-optic dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002034<a name=\"hpo-HP.580002034\"> </a></td><td>Abnormality of the rectum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002283<a name=\"hpo-HP.580002283\"> </a></td><td>Global brain atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003115<a name=\"hpo-HP.580003115\"> </a></td><td>Abnormal EKG</td></tr><tr><td style=\"white-space:nowrap\">HP:0002577<a name=\"hpo-HP.580002577\"> </a></td><td>Abnormal stomach morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002539<a name=\"hpo-HP.580002539\"> </a></td><td>Cortical dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006818<a name=\"hpo-HP.580006818\"> </a></td><td>4-layered lissencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000593<a name=\"hpo-HP.580000593\"> </a></td><td>Abnormal anterior chamber morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000179<a name=\"hpo-HP.580000179\"> </a></td><td>Thick lower lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002002<a name=\"hpo-HP.580002002\"> </a></td><td>Deep philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0009931<a name=\"hpo-HP.580009931\"> </a></td><td>Enlarged naris</td></tr><tr><td style=\"white-space:nowrap\">HP:0002948<a name=\"hpo-HP.580002948\"> </a></td><td>Vertebral fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002937<a name=\"hpo-HP.580002937\"> </a></td><td>Hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0002308<a name=\"hpo-HP.580002308\"> </a></td><td>Arnold-Chiari malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011320<a name=\"hpo-HP.580011320\"> </a></td><td>Unilambdoid synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002781<a name=\"hpo-HP.580002781\"> </a></td><td>Upper airway obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001363<a name=\"hpo-HP.580001363\"> </a></td><td>Craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000204<a name=\"hpo-HP.580000204\"> </a></td><td>Cleft upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001738<a name=\"hpo-HP.580001738\"> </a></td><td>Exocrine pancreatic insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002823<a name=\"hpo-HP.580002823\"> </a></td><td>Abnormality of femur morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000823<a name=\"hpo-HP.580000823\"> </a></td><td>Delayed puberty</td></tr><tr><td style=\"white-space:nowrap\">HP:0100279<a name=\"hpo-HP.580100279\"> </a></td><td>Ulcerative colitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003834<a name=\"hpo-HP.580003834\"> </a></td><td>Shoulder dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001065<a name=\"hpo-HP.580001065\"> </a></td><td>Striae distensae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000448<a name=\"hpo-HP.580000448\"> </a></td><td>Prominent nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0000554<a name=\"hpo-HP.580000554\"> </a></td><td>Uveitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001006<a name=\"hpo-HP.580001006\"> </a></td><td>obsolete Hypotrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000501<a name=\"hpo-HP.580000501\"> </a></td><td>Glaucoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000262<a name=\"hpo-HP.580000262\"> </a></td><td>Turricephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000729<a name=\"hpo-HP.580000729\"> </a></td><td>Autistic behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0010800<a name=\"hpo-HP.580010800\"> </a></td><td>Absent cupid's bow</td></tr><tr><td style=\"white-space:nowrap\">HP:0010808<a name=\"hpo-HP.580010808\"> </a></td><td>Protruding tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0009927<a name=\"hpo-HP.580009927\"> </a></td><td>Aplasia of the nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0100539<a name=\"hpo-HP.580100539\"> </a></td><td>Periorbital edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000629<a name=\"hpo-HP.580000629\"> </a></td><td>Periorbital fullness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000178<a name=\"hpo-HP.580000178\"> </a></td><td>Abnormality of lower lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000168<a name=\"hpo-HP.580000168\"> </a></td><td>Abnormality of the gingiva</td></tr><tr><td style=\"white-space:nowrap\">HP:0001022<a name=\"hpo-HP.580001022\"> </a></td><td>Albinism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000177<a name=\"hpo-HP.580000177\"> </a></td><td>Abnormality of upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001337<a name=\"hpo-HP.580001337\"> </a></td><td>Tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002135<a name=\"hpo-HP.580002135\"> </a></td><td>Basal ganglia calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0002352<a name=\"hpo-HP.580002352\"> </a></td><td>Leukoencephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002514<a name=\"hpo-HP.580002514\"> </a></td><td>Cerebral calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0010576<a name=\"hpo-HP.580010576\"> </a></td><td>Intracranial cystic lesion</td></tr><tr><td style=\"white-space:nowrap\">HP:0001622<a name=\"hpo-HP.580001622\"> </a></td><td>Premature birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002415<a name=\"hpo-HP.580002415\"> </a></td><td>Leukodystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001320<a name=\"hpo-HP.580001320\"> </a></td><td>Cerebellar vermis hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001773<a name=\"hpo-HP.580001773\"> </a></td><td>Short foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0002750<a name=\"hpo-HP.580002750\"> </a></td><td>Delayed skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004415<a name=\"hpo-HP.580004415\"> </a></td><td>Pulmonary artery stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012741<a name=\"hpo-HP.580012741\"> </a></td><td>Unilateral cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000036<a name=\"hpo-HP.580000036\"> </a></td><td>Abnormality of the penis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002408<a name=\"hpo-HP.580002408\"> </a></td><td>Cerebral arteriovenous malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0007457<a name=\"hpo-HP.580007457\"> </a></td><td>Prominent veins on trunk</td></tr><tr><td style=\"white-space:nowrap\">HP:0000378<a name=\"hpo-HP.580000378\"> </a></td><td>Cupped ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000396<a name=\"hpo-HP.580000396\"> </a></td><td>Overfolded helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000035<a name=\"hpo-HP.580000035\"> </a></td><td>Abnormal testis morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009895<a name=\"hpo-HP.580009895\"> </a></td><td>Abnormality of the crus of the helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000034<a name=\"hpo-HP.580000034\"> </a></td><td>Hydrocele testis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000722<a name=\"hpo-HP.580000722\"> </a></td><td>Obsessive-compulsive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000845<a name=\"hpo-HP.580000845\"> </a></td><td>Growth hormone excess</td></tr><tr><td style=\"white-space:nowrap\">HP:0100829<a name=\"hpo-HP.580100829\"> </a></td><td>Galactorrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001578<a name=\"hpo-HP.580001578\"> </a></td><td>Increased circulating cortisol level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000786<a name=\"hpo-HP.580000786\"> </a></td><td>Primary amenorrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001701<a name=\"hpo-HP.580001701\"> </a></td><td>Pericarditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002076<a name=\"hpo-HP.580002076\"> </a></td><td>Migraine</td></tr><tr><td style=\"white-space:nowrap\">HP:0004755<a name=\"hpo-HP.580004755\"> </a></td><td>Supraventricular tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010522<a name=\"hpo-HP.580010522\"> </a></td><td>Dyslexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004313<a name=\"hpo-HP.580004313\"> </a></td><td>Decreased circulating antibody level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000011<a name=\"hpo-HP.580000011\"> </a></td><td>Neurogenic bladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000641<a name=\"hpo-HP.580000641\"> </a></td><td>Dysmetric saccades</td></tr><tr><td style=\"white-space:nowrap\">HP:0007772<a name=\"hpo-HP.580007772\"> </a></td><td>Impaired smooth pursuit</td></tr><tr><td style=\"white-space:nowrap\">HP:0001583<a name=\"hpo-HP.580001583\"> </a></td><td>Rotary nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010544<a name=\"hpo-HP.580010544\"> </a></td><td>Vertical nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012735<a name=\"hpo-HP.580012735\"> </a></td><td>Cough</td></tr><tr><td style=\"white-space:nowrap\">HP:0002075<a name=\"hpo-HP.580002075\"> </a></td><td>Dysdiadochokinesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0007256<a name=\"hpo-HP.580007256\"> </a></td><td>Abnormal pyramidal sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0001257<a name=\"hpo-HP.580001257\"> </a></td><td>Spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002321<a name=\"hpo-HP.580002321\"> </a></td><td>Vertigo</td></tr><tr><td style=\"white-space:nowrap\">HP:0002384<a name=\"hpo-HP.580002384\"> </a></td><td>Focal impaired awareness seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011376<a name=\"hpo-HP.580011376\"> </a></td><td>Morphological abnormality of the vestibule of the inner ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0002326<a name=\"hpo-HP.580002326\"> </a></td><td>Transient ischemic attack</td></tr><tr><td style=\"white-space:nowrap\">HP:0005584<a name=\"hpo-HP.580005584\"> </a></td><td>Renal cell carcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0003124<a name=\"hpo-HP.580003124\"> </a></td><td>Hypercholesterolemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003002<a name=\"hpo-HP.580003002\"> </a></td><td>Breast carcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0004953<a name=\"hpo-HP.580004953\"> </a></td><td>obsolete Dilatation of abdominal aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0004944<a name=\"hpo-HP.580004944\"> </a></td><td>Dilatation of the cerebral artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0000100<a name=\"hpo-HP.580000100\"> </a></td><td>Nephrotic syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002783<a name=\"hpo-HP.580002783\"> </a></td><td>Recurrent lower respiratory tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0003470<a name=\"hpo-HP.580003470\"> </a></td><td>Paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006597<a name=\"hpo-HP.580006597\"> </a></td><td>Diaphragmatic paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008151<a name=\"hpo-HP.580008151\"> </a></td><td>Prolonged prothrombin time</td></tr><tr><td style=\"white-space:nowrap\">HP:0010628<a name=\"hpo-HP.580010628\"> </a></td><td>Facial palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011892<a name=\"hpo-HP.580011892\"> </a></td><td>Low levels of vitamin K</td></tr><tr><td style=\"white-space:nowrap\">HP:0001075<a name=\"hpo-HP.580001075\"> </a></td><td>Atrophic scars</td></tr><tr><td style=\"white-space:nowrap\">HP:0001816<a name=\"hpo-HP.580001816\"> </a></td><td>Thin nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002216<a name=\"hpo-HP.580002216\"> </a></td><td>Premature graying of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0003401<a name=\"hpo-HP.580003401\"> </a></td><td>Paresthesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100134<a name=\"hpo-HP.580100134\"> </a></td><td>Abnormality of the axillary hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0100797<a name=\"hpo-HP.580100797\"> </a></td><td>Toenail dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010461<a name=\"hpo-HP.580010461\"> </a></td><td>Abnormality of the male genitalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000044<a name=\"hpo-HP.580000044\"> </a></td><td>Hypogonadotropic hypogonadism</td></tr><tr><td style=\"white-space:nowrap\">HP:0100568<a name=\"hpo-HP.580100568\"> </a></td><td>Neoplasm of the endocrine system</td></tr><tr><td style=\"white-space:nowrap\">HP:0001646<a name=\"hpo-HP.580001646\"> </a></td><td>Abnormal aortic valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000813<a name=\"hpo-HP.580000813\"> </a></td><td>Bicornuate uterus</td></tr><tr><td style=\"white-space:nowrap\">HP:0004380<a name=\"hpo-HP.580004380\"> </a></td><td>Aortic valve calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0001650<a name=\"hpo-HP.580001650\"> </a></td><td>Aortic valve stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000073<a name=\"hpo-HP.580000073\"> </a></td><td>Ureteral duplication</td></tr><tr><td style=\"white-space:nowrap\">HP:0100651<a name=\"hpo-HP.580100651\"> </a></td><td>Type I diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000819<a name=\"hpo-HP.580000819\"> </a></td><td>Diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000573<a name=\"hpo-HP.580000573\"> </a></td><td>Retinal hemorrhage</td></tr><tr><td style=\"white-space:nowrap\">HP:0005264<a name=\"hpo-HP.580005264\"> </a></td><td>Abnormality of the gallbladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000475<a name=\"hpo-HP.580000475\"> </a></td><td>Broad neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000089<a name=\"hpo-HP.580000089\"> </a></td><td>Renal hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000921<a name=\"hpo-HP.580000921\"> </a></td><td>Missing ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0001789<a name=\"hpo-HP.580001789\"> </a></td><td>Hydrops fetalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002089<a name=\"hpo-HP.580002089\"> </a></td><td>Pulmonary hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003422<a name=\"hpo-HP.580003422\"> </a></td><td>Vertebral segmentation defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002323<a name=\"hpo-HP.580002323\"> </a></td><td>Anencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000341<a name=\"hpo-HP.580000341\"> </a></td><td>Narrow forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0002869<a name=\"hpo-HP.580002869\"> </a></td><td>Flared iliac wings</td></tr><tr><td style=\"white-space:nowrap\">HP:0003100<a name=\"hpo-HP.580003100\"> </a></td><td>Slender long bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0003275<a name=\"hpo-HP.580003275\"> </a></td><td>Narrow pelvis bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0009891<a name=\"hpo-HP.580009891\"> </a></td><td>Underdeveloped supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0011039<a name=\"hpo-HP.580011039\"> </a></td><td>Abnormality of the helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0008572<a name=\"hpo-HP.580008572\"> </a></td><td>External ear malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0009738<a name=\"hpo-HP.580009738\"> </a></td><td>Abnormality of the antihelix</td></tr><tr><td style=\"white-space:nowrap\">HP:0011328<a name=\"hpo-HP.580011328\"> </a></td><td>Abnormality of fontanelles</td></tr><tr><td style=\"white-space:nowrap\">HP:0012155<a name=\"hpo-HP.580012155\"> </a></td><td>Decreased corneal sensation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004602<a name=\"hpo-HP.580004602\"> </a></td><td>Cervical C2/C3 vertebral fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002997<a name=\"hpo-HP.580002997\"> </a></td><td>Abnormality of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0009777<a name=\"hpo-HP.580009777\"> </a></td><td>Absent thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002893<a name=\"hpo-HP.580002893\"> </a></td><td>Pituitary adenoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0040278<a name=\"hpo-HP.580040278\"> </a></td><td>Prolactinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001555<a name=\"hpo-HP.580001555\"> </a></td><td>Asymmetry of the thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0000902<a name=\"hpo-HP.580000902\"> </a></td><td>Rib fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002164<a name=\"hpo-HP.580002164\"> </a></td><td>Nail dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011314<a name=\"hpo-HP.580011314\"> </a></td><td>Abnormality of long bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002867<a name=\"hpo-HP.580002867\"> </a></td><td>Abnormality of the ilium</td></tr><tr><td style=\"white-space:nowrap\">HP:0000774<a name=\"hpo-HP.580000774\"> </a></td><td>Narrow chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0006482<a name=\"hpo-HP.580006482\"> </a></td><td>Abnormality of dental morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0004383<a name=\"hpo-HP.580004383\"> </a></td><td>Hypoplastic left heart</td></tr><tr><td style=\"white-space:nowrap\">HP:0002015<a name=\"hpo-HP.580002015\"> </a></td><td>Dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0500093<a name=\"hpo-HP.580500093\"> </a></td><td>Food allergy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001519<a name=\"hpo-HP.580001519\"> </a></td><td>Disproportionate tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0003179<a name=\"hpo-HP.580003179\"> </a></td><td>Protrusio acetabuli</td></tr><tr><td style=\"white-space:nowrap\">HP:0007385<a name=\"hpo-HP.580007385\"> </a></td><td>Aplasia cutis congenita of scalp</td></tr><tr><td style=\"white-space:nowrap\">HP:0000716<a name=\"hpo-HP.580000716\"> </a></td><td>Depressivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0012583<a name=\"hpo-HP.580012583\"> </a></td><td>Unilateral renal hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000618<a name=\"hpo-HP.580000618\"> </a></td><td>Blindness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001004<a name=\"hpo-HP.580001004\"> </a></td><td>Lymphedema</td></tr><tr><td style=\"white-space:nowrap\">HP:0002652<a name=\"hpo-HP.580002652\"> </a></td><td>Skeletal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012520<a name=\"hpo-HP.580012520\"> </a></td><td>Perivascular spaces</td></tr><tr><td style=\"white-space:nowrap\">HP:0005293<a name=\"hpo-HP.580005293\"> </a></td><td>Venous insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0012432<a name=\"hpo-HP.580012432\"> </a></td><td>Chronic fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002578<a name=\"hpo-HP.580002578\"> </a></td><td>Gastroparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001658<a name=\"hpo-HP.580001658\"> </a></td><td>Myocardial infarction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001802<a name=\"hpo-HP.580001802\"> </a></td><td>Absent toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0001821<a name=\"hpo-HP.580001821\"> </a></td><td>Broad nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0000807<a name=\"hpo-HP.580000807\"> </a></td><td>Glandular hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0100582<a name=\"hpo-HP.580100582\"> </a></td><td>Nasal polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002653<a name=\"hpo-HP.580002653\"> </a></td><td>Bone pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0001073<a name=\"hpo-HP.580001073\"> </a></td><td>Cigarette-paper scars</td></tr><tr><td style=\"white-space:nowrap\">HP:0031913<a name=\"hpo-HP.580031913\"> </a></td><td>Rhombencephalosynapsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002617<a name=\"hpo-HP.580002617\"> </a></td><td>Dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005107<a name=\"hpo-HP.580005107\"> </a></td><td>Abnormal sacrum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002025<a name=\"hpo-HP.580002025\"> </a></td><td>Anal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0009099<a name=\"hpo-HP.580009099\"> </a></td><td>Median cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0003212<a name=\"hpo-HP.580003212\"> </a></td><td>Increased circulating IgE level</td></tr><tr><td style=\"white-space:nowrap\">HP:0001319<a name=\"hpo-HP.580001319\"> </a></td><td>Neonatal hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002659<a name=\"hpo-HP.580002659\"> </a></td><td>Increased susceptibility to fractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0025246<a name=\"hpo-HP.580025246\"> </a></td><td>Trichilemmal cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0002107<a name=\"hpo-HP.580002107\"> </a></td><td>Pneumothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0000107<a name=\"hpo-HP.580000107\"> </a></td><td>Renal cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0001025<a name=\"hpo-HP.580001025\"> </a></td><td>Urticaria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002204<a name=\"hpo-HP.580002204\"> </a></td><td>Pulmonary embolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001058<a name=\"hpo-HP.580001058\"> </a></td><td>Poor wound healing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003010<a name=\"hpo-HP.580003010\"> </a></td><td>Prolonged bleeding time</td></tr><tr><td style=\"white-space:nowrap\">HP:0100502<a name=\"hpo-HP.580100502\"> </a></td><td>Vitamin B12 deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0100510<a name=\"hpo-HP.580100510\"> </a></td><td>Low levels of vitamin C</td></tr><tr><td style=\"white-space:nowrap\">HP:0030976<a name=\"hpo-HP.580030976\"> </a></td><td>Abnormal factor VIII activity</td></tr><tr><td style=\"white-space:nowrap\">HP:0100789<a name=\"hpo-HP.580100789\"> </a></td><td>Torus palatinus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000108<a name=\"hpo-HP.580000108\"> </a></td><td>Renal corticomedullary cysts</td></tr><tr><td style=\"white-space:nowrap\">HP:0000072<a name=\"hpo-HP.580000072\"> </a></td><td>Hydroureter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000019<a name=\"hpo-HP.580000019\"> </a></td><td>Urinary hesitancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100771<a name=\"hpo-HP.580100771\"> </a></td><td>Hypoperistalsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000021<a name=\"hpo-HP.580000021\"> </a></td><td>Megacystis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004388<a name=\"hpo-HP.580004388\"> </a></td><td>Microcolon</td></tr><tr><td style=\"white-space:nowrap\">HP:0005247<a name=\"hpo-HP.580005247\"> </a></td><td>Hypoplasia of the abdominal wall musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0004794<a name=\"hpo-HP.580004794\"> </a></td><td>Malrotation of small bowel</td></tr><tr><td style=\"white-space:nowrap\">HP:0000045<a name=\"hpo-HP.580000045\"> </a></td><td>Abnormality of the scrotum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002236<a name=\"hpo-HP.580002236\"> </a></td><td>Frontal upsweep of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000212<a name=\"hpo-HP.580000212\"> </a></td><td>Gingival overgrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001808<a name=\"hpo-HP.580001808\"> </a></td><td>Fragile nails</td></tr><tr><td style=\"white-space:nowrap\">HP:0000225<a name=\"hpo-HP.580000225\"> </a></td><td>Gingival bleeding</td></tr><tr><td style=\"white-space:nowrap\">HP:0006009<a name=\"hpo-HP.580006009\"> </a></td><td>Broad phalanx</td></tr><tr><td style=\"white-space:nowrap\">HP:0001837<a name=\"hpo-HP.580001837\"> </a></td><td>Broad toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001946<a name=\"hpo-HP.580001946\"> </a></td><td>Ketosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002490<a name=\"hpo-HP.580002490\"> </a></td><td>Increased CSF lactate</td></tr><tr><td style=\"white-space:nowrap\">HP:0002922<a name=\"hpo-HP.580002922\"> </a></td><td>Increased CSF protein</td></tr><tr><td style=\"white-space:nowrap\">HP:0003128<a name=\"hpo-HP.580003128\"> </a></td><td>Lactic acidosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003111<a name=\"hpo-HP.580003111\"> </a></td><td>Abnormal blood ion concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0032234<a name=\"hpo-HP.580032234\"> </a></td><td>Increased circulating creatine kinase MM isoform</td></tr><tr><td style=\"white-space:nowrap\">HP:0003348<a name=\"hpo-HP.580003348\"> </a></td><td>Hyperalaninemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008347<a name=\"hpo-HP.580008347\"> </a></td><td>Decreased activity of mitochondrial complex IV</td></tr><tr><td style=\"white-space:nowrap\">HP:0000326<a name=\"hpo-HP.580000326\"> </a></td><td>Abnormality of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0010758<a name=\"hpo-HP.580010758\"> </a></td><td>Abnormality of the premaxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0005681<a name=\"hpo-HP.580005681\"> </a></td><td>Juvenile rheumatoid arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000514<a name=\"hpo-HP.580000514\"> </a></td><td>Slow saccadic eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0002788<a name=\"hpo-HP.580002788\"> </a></td><td>Recurrent upper respiratory tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0003396<a name=\"hpo-HP.580003396\"> </a></td><td>Syringomyelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003011<a name=\"hpo-HP.580003011\"> </a></td><td>Abnormality of the musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0002098<a name=\"hpo-HP.580002098\"> </a></td><td>Respiratory distress</td></tr><tr><td style=\"white-space:nowrap\">HP:0002018<a name=\"hpo-HP.580002018\"> </a></td><td>Nausea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002014<a name=\"hpo-HP.580002014\"> </a></td><td>Diarrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0025168<a name=\"hpo-HP.580025168\"> </a></td><td>Left ventricular diastolic dysfunction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001679<a name=\"hpo-HP.580001679\"> </a></td><td>Abnormal aortic morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000159<a name=\"hpo-HP.580000159\"> </a></td><td>Abnormal lip morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011338<a name=\"hpo-HP.580011338\"> </a></td><td>Abnormality of mouth shape</td></tr><tr><td style=\"white-space:nowrap\">HP:0000478<a name=\"hpo-HP.580000478\"> </a></td><td>Abnormality of the eye</td></tr><tr><td style=\"white-space:nowrap\">HP:0000154<a name=\"hpo-HP.580000154\"> </a></td><td>Wide mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001513<a name=\"hpo-HP.580001513\"> </a></td><td>Obesity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002475<a name=\"hpo-HP.580002475\"> </a></td><td>Myelomeningocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0003765<a name=\"hpo-HP.580003765\"> </a></td><td>Psoriasiform dermatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010289<a name=\"hpo-HP.580010289\"> </a></td><td>Cleft of alveolar ridge of maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0003908<a name=\"hpo-HP.580003908\"> </a></td><td>Corner fracture of metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002190<a name=\"hpo-HP.580002190\"> </a></td><td>Choroid plexus cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0004370<a name=\"hpo-HP.580004370\"> </a></td><td>Abnormality of temperature regulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011611<a name=\"hpo-HP.580011611\"> </a></td><td>Interrupted aortic arch</td></tr><tr><td style=\"white-space:nowrap\">HP:0000737<a name=\"hpo-HP.580000737\"> </a></td><td>Irritability</td></tr><tr><td style=\"white-space:nowrap\">HP:0001344<a name=\"hpo-HP.580001344\"> </a></td><td>Absent speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0002376<a name=\"hpo-HP.580002376\"> </a></td><td>Developmental regression</td></tr><tr><td style=\"white-space:nowrap\">HP:0002140<a name=\"hpo-HP.580002140\"> </a></td><td>Ischemic stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0001287<a name=\"hpo-HP.580001287\"> </a></td><td>Meningitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002721<a name=\"hpo-HP.580002721\"> </a></td><td>Immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000041<a name=\"hpo-HP.580000041\"> </a></td><td>Chordee</td></tr><tr><td style=\"white-space:nowrap\">HP:0012854<a name=\"hpo-HP.580012854\"> </a></td><td>Midshaft hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0000808<a name=\"hpo-HP.580000808\"> </a></td><td>Penoscrotal hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0000048<a name=\"hpo-HP.580000048\"> </a></td><td>Bifid scrotum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001047<a name=\"hpo-HP.580001047\"> </a></td><td>Atopic dermatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001621<a name=\"hpo-HP.580001621\"> </a></td><td>Weak voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0002372<a name=\"hpo-HP.580002372\"> </a></td><td>Normal interictal EEG</td></tr><tr><td style=\"white-space:nowrap\">HP:0012803<a name=\"hpo-HP.580012803\"> </a></td><td>Anisometropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011386<a name=\"hpo-HP.580011386\"> </a></td><td>Narrow internal auditory canal</td></tr><tr><td style=\"white-space:nowrap\">HP:0012714<a name=\"hpo-HP.580012714\"> </a></td><td>Severe hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0006485<a name=\"hpo-HP.580006485\"> </a></td><td>Agenesis of incisor</td></tr><tr><td style=\"white-space:nowrap\">HP:0000787<a name=\"hpo-HP.580000787\"> </a></td><td>Nephrolithiasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011332<a name=\"hpo-HP.580011332\"> </a></td><td>Hemifacial hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001909<a name=\"hpo-HP.580001909\"> </a></td><td>Leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004808<a name=\"hpo-HP.580004808\"> </a></td><td>Acute myeloid leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006495<a name=\"hpo-HP.580006495\"> </a></td><td>Aplasia/Hypoplasia of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0001180<a name=\"hpo-HP.580001180\"> </a></td><td>Hand oligodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002991<a name=\"hpo-HP.580002991\"> </a></td><td>Abnormality of fibula morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001849<a name=\"hpo-HP.580001849\"> </a></td><td>Foot oligodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0006507<a name=\"hpo-HP.580006507\"> </a></td><td>Aplasia/hypoplasia of the humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0005613<a name=\"hpo-HP.580005613\"> </a></td><td>Aplasia/hypoplasia of the femur</td></tr><tr><td style=\"white-space:nowrap\">HP:0006492<a name=\"hpo-HP.580006492\"> </a></td><td>Aplasia/Hypoplasia of the fibula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000098<a name=\"hpo-HP.580000098\"> </a></td><td>Tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0003311<a name=\"hpo-HP.580003311\"> </a></td><td>Hypoplasia of the odontoid process</td></tr><tr><td style=\"white-space:nowrap\">HP:0005752<a name=\"hpo-HP.580005752\"> </a></td><td>Flattened moderately deformed vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0030039<a name=\"hpo-HP.580030039\"> </a></td><td>Fused thoracic vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0003304<a name=\"hpo-HP.580003304\"> </a></td><td>Spondylolysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001659<a name=\"hpo-HP.580001659\"> </a></td><td>Aortic regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002984<a name=\"hpo-HP.580002984\"> </a></td><td>Hypoplasia of the radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0009944<a name=\"hpo-HP.580009944\"> </a></td><td>Partial duplication of thumb phalanx</td></tr><tr><td style=\"white-space:nowrap\">HP:0005819<a name=\"hpo-HP.580005819\"> </a></td><td>Short middle phalanx of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0002110<a name=\"hpo-HP.580002110\"> </a></td><td>Bronchiectasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001677<a name=\"hpo-HP.580001677\"> </a></td><td>Coronary artery atherosclerosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001737<a name=\"hpo-HP.580001737\"> </a></td><td>Pancreatic cysts</td></tr><tr><td style=\"white-space:nowrap\">HP:0005113<a name=\"hpo-HP.580005113\"> </a></td><td>Aortic arch aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003022<a name=\"hpo-HP.580003022\"> </a></td><td>Hypoplasia of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0002205<a name=\"hpo-HP.580002205\"> </a></td><td>Recurrent respiratory infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0001669<a name=\"hpo-HP.580001669\"> </a></td><td>Transposition of the great arteries</td></tr><tr><td style=\"white-space:nowrap\">HP:0001716<a name=\"hpo-HP.580001716\"> </a></td><td>Wolff-Parkinson-White syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002758<a name=\"hpo-HP.580002758\"> </a></td><td>Osteoarthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002037<a name=\"hpo-HP.580002037\"> </a></td><td>Inflammation of the large intestine</td></tr><tr><td style=\"white-space:nowrap\">HP:0009892<a name=\"hpo-HP.580009892\"> </a></td><td>Anotia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011331<a name=\"hpo-HP.580011331\"> </a></td><td>Hemifacial atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0009118<a name=\"hpo-HP.580009118\"> </a></td><td>Aplasia/Hypoplasia of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0009940<a name=\"hpo-HP.580009940\"> </a></td><td>Asymmetry of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000682<a name=\"hpo-HP.580000682\"> </a></td><td>Abnormality of dental enamel</td></tr><tr><td style=\"white-space:nowrap\">HP:0009908<a name=\"hpo-HP.580009908\"> </a></td><td>Anterior creases of earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001541<a name=\"hpo-HP.580001541\"> </a></td><td>Ascites</td></tr><tr><td style=\"white-space:nowrap\">HP:0006687<a name=\"hpo-HP.580006687\"> </a></td><td>Aortic tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0010535<a name=\"hpo-HP.580010535\"> </a></td><td>Sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0100633<a name=\"hpo-HP.580100633\"> </a></td><td>Esophagitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002105<a name=\"hpo-HP.580002105\"> </a></td><td>Hemoptysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002613<a name=\"hpo-HP.580002613\"> </a></td><td>Biliary cirrhosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004469<a name=\"hpo-HP.580004469\"> </a></td><td>Chronic bronchitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002720<a name=\"hpo-HP.580002720\"> </a></td><td>Decreased circulating IgA level</td></tr><tr><td style=\"white-space:nowrap\">HP:0002904<a name=\"hpo-HP.580002904\"> </a></td><td>Hyperbilirubinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003237<a name=\"hpo-HP.580003237\"> </a></td><td>Increased circulating IgG level</td></tr><tr><td style=\"white-space:nowrap\">HP:0003262<a name=\"hpo-HP.580003262\"> </a></td><td>Smooth muscle antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0011227<a name=\"hpo-HP.580011227\"> </a></td><td>Elevated C-reactive protein level</td></tr><tr><td style=\"white-space:nowrap\">HP:0001852<a name=\"hpo-HP.580001852\"> </a></td><td>Sandal gap</td></tr><tr><td style=\"white-space:nowrap\">HP:0004381<a name=\"hpo-HP.580004381\"> </a></td><td>Supravalvular aortic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100700<a name=\"hpo-HP.580100700\"> </a></td><td>Abnormal arachnoid mater morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002624<a name=\"hpo-HP.580002624\"> </a></td><td>Abnormal venous morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002289<a name=\"hpo-HP.580002289\"> </a></td><td>Alopecia universalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0009588<a name=\"hpo-HP.580009588\"> </a></td><td>Vestibular Schwannoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001648<a name=\"hpo-HP.580001648\"> </a></td><td>Cor pulmonale</td></tr><tr><td style=\"white-space:nowrap\">HP:0002091<a name=\"hpo-HP.580002091\"> </a></td><td>Restrictive ventilatory defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002092<a name=\"hpo-HP.580002092\"> </a></td><td>Pulmonary arterial hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0002113<a name=\"hpo-HP.580002113\"> </a></td><td>Pulmonary infiltrates</td></tr><tr><td style=\"white-space:nowrap\">HP:0003138<a name=\"hpo-HP.580003138\"> </a></td><td>Increased blood urea nitrogen</td></tr><tr><td style=\"white-space:nowrap\">HP:0003259<a name=\"hpo-HP.580003259\"> </a></td><td>Elevated serum creatinine</td></tr><tr><td style=\"white-space:nowrap\">HP:0005180<a name=\"hpo-HP.580005180\"> </a></td><td>Tricuspid regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0012585<a name=\"hpo-HP.580012585\"> </a></td><td>Renal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005133<a name=\"hpo-HP.580005133\"> </a></td><td>Right ventricular dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005575<a name=\"hpo-HP.580005575\"> </a></td><td>Hemolytic-uremic syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0001697<a name=\"hpo-HP.580001697\"> </a></td><td>Abnormal pericardium morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012486<a name=\"hpo-HP.580012486\"> </a></td><td>Myelitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002385<a name=\"hpo-HP.580002385\"> </a></td><td>Paraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006706<a name=\"hpo-HP.580006706\"> </a></td><td>Cystic liver disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0010880<a name=\"hpo-HP.580010880\"> </a></td><td>Increased nuchal translucency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000457<a name=\"hpo-HP.580000457\"> </a></td><td>Depressed nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0002263<a name=\"hpo-HP.580002263\"> </a></td><td>Exaggerated cupid's bow</td></tr><tr><td style=\"white-space:nowrap\">HP:0002500<a name=\"hpo-HP.580002500\"> </a></td><td>Abnormality of the cerebral white matter</td></tr><tr><td style=\"white-space:nowrap\">HP:0002835<a name=\"hpo-HP.580002835\"> </a></td><td>Aspiration</td></tr><tr><td style=\"white-space:nowrap\">HP:0000600<a name=\"hpo-HP.580000600\"> </a></td><td>Abnormality of the pharynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0004327<a name=\"hpo-HP.580004327\"> </a></td><td>Abnormal vitreous humor morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0004378<a name=\"hpo-HP.580004378\"> </a></td><td>Abnormality of the anus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012374<a name=\"hpo-HP.580012374\"> </a></td><td>obsolete Abnormal globe morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100768<a name=\"hpo-HP.580100768\"> </a></td><td>Choriocarcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0030991<a name=\"hpo-HP.580030991\"> </a></td><td>Sclerosing cholangitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006510<a name=\"hpo-HP.580006510\"> </a></td><td>Chronic pulmonary obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0000710<a name=\"hpo-HP.580000710\"> </a></td><td>Hyperorality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001270<a name=\"hpo-HP.580001270\"> </a></td><td>Motor delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0001548<a name=\"hpo-HP.580001548\"> </a></td><td>Overgrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002311<a name=\"hpo-HP.580002311\"> </a></td><td>Incoordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0006288<a name=\"hpo-HP.580006288\"> </a></td><td>Advanced eruption of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0006323<a name=\"hpo-HP.580006323\"> </a></td><td>Premature loss of primary teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009890<a name=\"hpo-HP.580009890\"> </a></td><td>High anterior hairline</td></tr><tr><td style=\"white-space:nowrap\">HP:0100034<a name=\"hpo-HP.580100034\"> </a></td><td>Motor tics</td></tr><tr><td style=\"white-space:nowrap\">HP:0100035<a name=\"hpo-HP.580100035\"> </a></td><td>Phonic tics</td></tr><tr><td style=\"white-space:nowrap\">HP:0000348<a name=\"hpo-HP.580000348\"> </a></td><td>High forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0001520<a name=\"hpo-HP.580001520\"> </a></td><td>Large for gestational age</td></tr><tr><td style=\"white-space:nowrap\">HP:0001239<a name=\"hpo-HP.580001239\"> </a></td><td>Wrist flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0007359<a name=\"hpo-HP.580007359\"> </a></td><td>Focal-onset seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000430<a name=\"hpo-HP.580000430\"> </a></td><td>Underdeveloped nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0007400<a name=\"hpo-HP.580007400\"> </a></td><td>Irregular hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0100495<a name=\"hpo-HP.580100495\"> </a></td><td>Mastocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012378<a name=\"hpo-HP.580012378\"> </a></td><td>Fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002046<a name=\"hpo-HP.580002046\"> </a></td><td>Heat intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0003270<a name=\"hpo-HP.580003270\"> </a></td><td>Abdominal distention</td></tr><tr><td style=\"white-space:nowrap\">HP:0002180<a name=\"hpo-HP.580002180\"> </a></td><td>Neurodegeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0003493<a name=\"hpo-HP.580003493\"> </a></td><td>Antinuclear antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0030057<a name=\"hpo-HP.580030057\"> </a></td><td>Autoimmune antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0006802<a name=\"hpo-HP.580006802\"> </a></td><td>Abnormal anterior horn cell morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000064<a name=\"hpo-HP.580000064\"> </a></td><td>Hypoplastic labia minora</td></tr><tr><td style=\"white-space:nowrap\">HP:0000338<a name=\"hpo-HP.580000338\"> </a></td><td>Hypomimic face</td></tr><tr><td style=\"white-space:nowrap\">HP:0001642<a name=\"hpo-HP.580001642\"> </a></td><td>Pulmonic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011344<a name=\"hpo-HP.580011344\"> </a></td><td>Severe global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0200007<a name=\"hpo-HP.580200007\"> </a></td><td>Abnormal size of the palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0004464<a name=\"hpo-HP.580004464\"> </a></td><td>Postauricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0000130<a name=\"hpo-HP.580000130\"> </a></td><td>Abnormality of the uterus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000137<a name=\"hpo-HP.580000137\"> </a></td><td>Abnormality of the ovary</td></tr><tr><td style=\"white-space:nowrap\">HP:0000142<a name=\"hpo-HP.580000142\"> </a></td><td>Abnormal vagina morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000370<a name=\"hpo-HP.580000370\"> </a></td><td>Abnormality of the middle ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0011787<a name=\"hpo-HP.580011787\"> </a></td><td>Central hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000274<a name=\"hpo-HP.580000274\"> </a></td><td>Small face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000446<a name=\"hpo-HP.580000446\"> </a></td><td>Narrow nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000622<a name=\"hpo-HP.580000622\"> </a></td><td>Blurred vision</td></tr><tr><td style=\"white-space:nowrap\">HP:0001245<a name=\"hpo-HP.580001245\"> </a></td><td>Small thenar eminence</td></tr><tr><td style=\"white-space:nowrap\">HP:0009601<a name=\"hpo-HP.580009601\"> </a></td><td>Aplasia/Hypoplasia of the thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0011343<a name=\"hpo-HP.580011343\"> </a></td><td>Moderate global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0000419<a name=\"hpo-HP.580000419\"> </a></td><td>Abnormality of the nasal septum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000502<a name=\"hpo-HP.580000502\"> </a></td><td>Abnormal conjunctiva morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000591<a name=\"hpo-HP.580000591\"> </a></td><td>Abnormal sclera morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000615<a name=\"hpo-HP.580000615\"> </a></td><td>Abnormal pupil morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001163<a name=\"hpo-HP.580001163\"> </a></td><td>Abnormality of the metacarpal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0001832<a name=\"hpo-HP.580001832\"> </a></td><td>Abnormal metatarsal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001850<a name=\"hpo-HP.580001850\"> </a></td><td>Abnormality of the tarsal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0010490<a name=\"hpo-HP.580010490\"> </a></td><td>Abnormality of the palmar creases</td></tr><tr><td style=\"white-space:nowrap\">HP:0010881<a name=\"hpo-HP.580010881\"> </a></td><td>Abnormality of the umbilical cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0009113<a name=\"hpo-HP.580009113\"> </a></td><td>Diaphragmatic weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0011664<a name=\"hpo-HP.580011664\"> </a></td><td>Left ventricular noncompaction cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100240<a name=\"hpo-HP.580100240\"> </a></td><td>Synostosis of joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0001838<a name=\"hpo-HP.580001838\"> </a></td><td>Rocker bottom foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0003717<a name=\"hpo-HP.580003717\"> </a></td><td>Minimal subcutaneous fat</td></tr><tr><td style=\"white-space:nowrap\">HP:0001339<a name=\"hpo-HP.580001339\"> </a></td><td>Lissencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001591<a name=\"hpo-HP.580001591\"> </a></td><td>Bell-shaped thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0002655<a name=\"hpo-HP.580002655\"> </a></td><td>Spondyloepiphyseal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002983<a name=\"hpo-HP.580002983\"> </a></td><td>Micromelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003016<a name=\"hpo-HP.580003016\"> </a></td><td>Metaphyseal widening</td></tr><tr><td style=\"white-space:nowrap\">HP:0009826<a name=\"hpo-HP.580009826\"> </a></td><td>Limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0004488<a name=\"hpo-HP.580004488\"> </a></td><td>Macrocephaly at birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001695<a name=\"hpo-HP.580001695\"> </a></td><td>Cardiac arrest</td></tr><tr><td style=\"white-space:nowrap\">HP:0001712<a name=\"hpo-HP.580001712\"> </a></td><td>Left ventricular hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100775<a name=\"hpo-HP.580100775\"> </a></td><td>Dural ectasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000846<a name=\"hpo-HP.580000846\"> </a></td><td>Adrenal insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002925<a name=\"hpo-HP.580002925\"> </a></td><td>Increased thyroid-stimulating hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0100646<a name=\"hpo-HP.580100646\"> </a></td><td>Thyroiditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000836<a name=\"hpo-HP.580000836\"> </a></td><td>Hyperthyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0004414<a name=\"hpo-HP.580004414\"> </a></td><td>Abnormality of the pulmonary artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0000465<a name=\"hpo-HP.580000465\"> </a></td><td>Webbed neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000723<a name=\"hpo-HP.580000723\"> </a></td><td>Restrictive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0002253<a name=\"hpo-HP.580002253\"> </a></td><td>Colonic diverticula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001310<a name=\"hpo-HP.580001310\"> </a></td><td>Dysmetria</td></tr><tr><td style=\"white-space:nowrap\">HP:0000093<a name=\"hpo-HP.580000093\"> </a></td><td>Proteinuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002907<a name=\"hpo-HP.580002907\"> </a></td><td>Microscopic hematuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0003073<a name=\"hpo-HP.580003073\"> </a></td><td>Hypoalbuminemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004315<a name=\"hpo-HP.580004315\"> </a></td><td>Decreased circulating IgG level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000795<a name=\"hpo-HP.580000795\"> </a></td><td>Abnormality of the urethra</td></tr><tr><td style=\"white-space:nowrap\">HP:0001015<a name=\"hpo-HP.580001015\"> </a></td><td>Prominent superficial veins</td></tr><tr><td style=\"white-space:nowrap\">HP:0004691<a name=\"hpo-HP.580004691\"> </a></td><td>2-3 toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005328<a name=\"hpo-HP.580005328\"> </a></td><td>Progeroid facial appearance</td></tr><tr><td style=\"white-space:nowrap\">HP:0005487<a name=\"hpo-HP.580005487\"> </a></td><td>Prominent metopic ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0007552<a name=\"hpo-HP.580007552\"> </a></td><td>Abnormal subcutaneous fat tissue distribution</td></tr><tr><td style=\"white-space:nowrap\">HP:0100678<a name=\"hpo-HP.580100678\"> </a></td><td>Premature skin wrinkling</td></tr><tr><td style=\"white-space:nowrap\">HP:0031137<a name=\"hpo-HP.580031137\"> </a></td><td>Storage in hepatocytes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002521<a name=\"hpo-HP.580002521\"> </a></td><td>Hypsarrhythmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005390<a name=\"hpo-HP.580005390\"> </a></td><td>Recurrent opportunistic infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0002716<a name=\"hpo-HP.580002716\"> </a></td><td>Lymphadenopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005379<a name=\"hpo-HP.580005379\"> </a></td><td>obsolete Severe T lymphocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004432<a name=\"hpo-HP.580004432\"> </a></td><td>Agammaglobulinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006695<a name=\"hpo-HP.580006695\"> </a></td><td>Atrioventricular canal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0001733<a name=\"hpo-HP.580001733\"> </a></td><td>Pancreatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002350<a name=\"hpo-HP.580002350\"> </a></td><td>Cerebellar cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0012110<a name=\"hpo-HP.580012110\"> </a></td><td>Hypoplasia of the pons</td></tr><tr><td style=\"white-space:nowrap\">HP:0001948<a name=\"hpo-HP.580001948\"> </a></td><td>Alkalosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003113<a name=\"hpo-HP.580003113\"> </a></td><td>Hypochloremia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003155<a name=\"hpo-HP.580003155\"> </a></td><td>Elevated alkaline phosphatase</td></tr><tr><td style=\"white-space:nowrap\">HP:0003542<a name=\"hpo-HP.580003542\"> </a></td><td>Increased serum pyruvate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000421<a name=\"hpo-HP.580000421\"> </a></td><td>Epistaxis</td></tr><tr><td style=\"white-space:nowrap\">HP:0200136<a name=\"hpo-HP.580200136\"> </a></td><td>Oral-pharyngeal dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000805<a name=\"hpo-HP.580000805\"> </a></td><td>Enuresis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005616<a name=\"hpo-HP.580005616\"> </a></td><td>Accelerated skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002459<a name=\"hpo-HP.580002459\"> </a></td><td>obsolete Dysautonomia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007302<a name=\"hpo-HP.580007302\"> </a></td><td>Bipolar affective disorder</td></tr><tr><td style=\"white-space:nowrap\">HP:0100602<a name=\"hpo-HP.580100602\"> </a></td><td>Preeclampsia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100508<a name=\"hpo-HP.580100508\"> </a></td><td>Abnormality of vitamin metabolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001140<a name=\"hpo-HP.580001140\"> </a></td><td>Limbal dermoid</td></tr><tr><td style=\"white-space:nowrap\">HP:0000143<a name=\"hpo-HP.580000143\"> </a></td><td>Rectovaginal fistula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001746<a name=\"hpo-HP.580001746\"> </a></td><td>Asplenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012715<a name=\"hpo-HP.580012715\"> </a></td><td>Profound hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001748<a name=\"hpo-HP.580001748\"> </a></td><td>Polysplenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003072<a name=\"hpo-HP.580003072\"> </a></td><td>Hypercalcemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002905<a name=\"hpo-HP.580002905\"> </a></td><td>Hyperphosphatemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002901<a name=\"hpo-HP.580002901\"> </a></td><td>Hypocalcemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001367<a name=\"hpo-HP.580001367\"> </a></td><td>Abnormal joint morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0010562<a name=\"hpo-HP.580010562\"> </a></td><td>Keloids</td></tr><tr><td style=\"white-space:nowrap\">HP:0004430<a name=\"hpo-HP.580004430\"> </a></td><td>Severe combined immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000003<a name=\"hpo-HP.580000003\"> </a></td><td>Multicystic kidney dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010980<a name=\"hpo-HP.580010980\"> </a></td><td>Hyperlipoproteinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002155<a name=\"hpo-HP.580002155\"> </a></td><td>Hypertriglyceridemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000520<a name=\"hpo-HP.580000520\"> </a></td><td>Proptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000180<a name=\"hpo-HP.580000180\"> </a></td><td>Lobulated tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0005486<a name=\"hpo-HP.580005486\"> </a></td><td>Small fontanelle</td></tr><tr><td style=\"white-space:nowrap\">HP:0000891<a name=\"hpo-HP.580000891\"> </a></td><td>Cervical ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002557<a name=\"hpo-HP.580002557\"> </a></td><td>Hypoplastic nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0009112<a name=\"hpo-HP.580009112\"> </a></td><td>Aplasia of the left hemidiaphragm</td></tr><tr><td style=\"white-space:nowrap\">HP:0001719<a name=\"hpo-HP.580001719\"> </a></td><td>Double outlet right ventricle</td></tr><tr><td style=\"white-space:nowrap\">HP:0001682<a name=\"hpo-HP.580001682\"> </a></td><td>Subvalvular aortic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001667<a name=\"hpo-HP.580001667\"> </a></td><td>Right ventricular hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002101<a name=\"hpo-HP.580002101\"> </a></td><td>Abnormal lung lobation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002202<a name=\"hpo-HP.580002202\"> </a></td><td>Pleural effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002566<a name=\"hpo-HP.580002566\"> </a></td><td>Intestinal malrotation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004510<a name=\"hpo-HP.580004510\"> </a></td><td>Pancreatic islet-cell hyperplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001747<a name=\"hpo-HP.580001747\"> </a></td><td>Accessory spleen</td></tr><tr><td style=\"white-space:nowrap\">HP:0002181<a name=\"hpo-HP.580002181\"> </a></td><td>Cerebral edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000967<a name=\"hpo-HP.580000967\"> </a></td><td>Petechiae</td></tr><tr><td style=\"white-space:nowrap\">HP:0009702<a name=\"hpo-HP.580009702\"> </a></td><td>Carpal synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000927<a name=\"hpo-HP.580000927\"> </a></td><td>Abnormality of skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004348<a name=\"hpo-HP.580004348\"> </a></td><td>Abnormality of bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0003019<a name=\"hpo-HP.580003019\"> </a></td><td>Abnormality of the wrist</td></tr><tr><td style=\"white-space:nowrap\">HP:0003063<a name=\"hpo-HP.580003063\"> </a></td><td>Abnormality of the humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001059<a name=\"hpo-HP.580001059\"> </a></td><td>Pterygium</td></tr><tr><td style=\"white-space:nowrap\">HP:0001528<a name=\"hpo-HP.580001528\"> </a></td><td>Hemihypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011228<a name=\"hpo-HP.580011228\"> </a></td><td>Horizontal eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000766<a name=\"hpo-HP.580000766\"> </a></td><td>Abnormality of the sternum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001254<a name=\"hpo-HP.580001254\"> </a></td><td>Lethargy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002360<a name=\"hpo-HP.580002360\"> </a></td><td>Sleep disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0001063<a name=\"hpo-HP.580001063\"> </a></td><td>Acrocyanosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001769<a name=\"hpo-HP.580001769\"> </a></td><td>Broad foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0010280<a name=\"hpo-HP.580010280\"> </a></td><td>Stomatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001288<a name=\"hpo-HP.580001288\"> </a></td><td>Gait disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0008330<a name=\"hpo-HP.580008330\"> </a></td><td>Reduced von Willebrand factor activity</td></tr><tr><td style=\"white-space:nowrap\">HP:0001954<a name=\"hpo-HP.580001954\"> </a></td><td>Recurrent fever</td></tr><tr><td style=\"white-space:nowrap\">HP:0004311<a name=\"hpo-HP.580004311\"> </a></td><td>Abnormal macrophage morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012539<a name=\"hpo-HP.580012539\"> </a></td><td>Non-Hodgkin lymphoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0002074<a name=\"hpo-HP.580002074\"> </a></td><td>Increased neuronal autofluorescent lipopigment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002973<a name=\"hpo-HP.580002973\"> </a></td><td>Abnormality of the forearm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003203<a name=\"hpo-HP.580003203\"> </a></td><td>Impaired oxidative burst</td></tr><tr><td style=\"white-space:nowrap\">HP:0003027<a name=\"hpo-HP.580003027\"> </a></td><td>Mesomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002754<a name=\"hpo-HP.580002754\"> </a></td><td>Osteomyelitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004431<a name=\"hpo-HP.580004431\"> </a></td><td>Complement deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0001258<a name=\"hpo-HP.580001258\"> </a></td><td>Spastic paraplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012811<a name=\"hpo-HP.580012811\"> </a></td><td>Wide nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0011832<a name=\"hpo-HP.580011832\"> </a></td><td>Narrow nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000288<a name=\"hpo-HP.580000288\"> </a></td><td>Abnormality of the philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002357<a name=\"hpo-HP.580002357\"> </a></td><td>Dysphasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000871<a name=\"hpo-HP.580000871\"> </a></td><td>Panhypopituitarism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000233<a name=\"hpo-HP.580000233\"> </a></td><td>Thin vermilion border</td></tr><tr><td style=\"white-space:nowrap\">HP:0003281<a name=\"hpo-HP.580003281\"> </a></td><td>Increased serum ferritin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010752<a name=\"hpo-HP.580010752\"> </a></td><td>Cleft mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000437<a name=\"hpo-HP.580000437\"> </a></td><td>Depressed nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000453<a name=\"hpo-HP.580000453\"> </a></td><td>Choanal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000863<a name=\"hpo-HP.580000863\"> </a></td><td>Central diabetes insipidus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000058<a name=\"hpo-HP.580000058\"> </a></td><td>Abnormality of the labia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007418<a name=\"hpo-HP.580007418\"> </a></td><td>Alopecia totalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100765<a name=\"hpo-HP.580100765\"> </a></td><td>Abnormality of the tonsils</td></tr><tr><td style=\"white-space:nowrap\">HP:0100747<a name=\"hpo-HP.580100747\"> </a></td><td>Macrodactyly of toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002109<a name=\"hpo-HP.580002109\"> </a></td><td>obsolete Abnormality of the bronchi</td></tr><tr><td style=\"white-space:nowrap\">HP:0011950<a name=\"hpo-HP.580011950\"> </a></td><td>Bronchiolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002850<a name=\"hpo-HP.580002850\"> </a></td><td>Decreased circulating total IgM</td></tr><tr><td style=\"white-space:nowrap\">HP:0001395<a name=\"hpo-HP.580001395\"> </a></td><td>Hepatic fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010701<a name=\"hpo-HP.580010701\"> </a></td><td>Abnormal immunoglobulin level</td></tr><tr><td style=\"white-space:nowrap\">HP:0009928<a name=\"hpo-HP.580009928\"> </a></td><td>Thick nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0010807<a name=\"hpo-HP.580010807\"> </a></td><td>Open bite</td></tr><tr><td style=\"white-space:nowrap\">HP:0002126<a name=\"hpo-HP.580002126\"> </a></td><td>Polymicrogyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002900<a name=\"hpo-HP.580002900\"> </a></td><td>Hypokalemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000155<a name=\"hpo-HP.580000155\"> </a></td><td>Oral ulcer</td></tr><tr><td style=\"white-space:nowrap\">HP:0000135<a name=\"hpo-HP.580000135\"> </a></td><td>Hypogonadism</td></tr><tr><td style=\"white-space:nowrap\">HP:0100783<a name=\"hpo-HP.580100783\"> </a></td><td>Breast aplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000336<a name=\"hpo-HP.580000336\"> </a></td><td>Prominent supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0010557<a name=\"hpo-HP.580010557\"> </a></td><td>Overlapping fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0005100<a name=\"hpo-HP.580005100\"> </a></td><td>Premature birth following premature rupture of fetal membranes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002594<a name=\"hpo-HP.580002594\"> </a></td><td>Pancreatic hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010109<a name=\"hpo-HP.580010109\"> </a></td><td>Short hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0002334<a name=\"hpo-HP.580002334\"> </a></td><td>Abnormality of the cerebellar vermis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003326<a name=\"hpo-HP.580003326\"> </a></td><td>Myalgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001645<a name=\"hpo-HP.580001645\"> </a></td><td>Sudden cardiac death</td></tr><tr><td style=\"white-space:nowrap\">HP:0001612<a name=\"hpo-HP.580001612\"> </a></td><td>Weak cry</td></tr><tr><td style=\"white-space:nowrap\">HP:0001618<a name=\"hpo-HP.580001618\"> </a></td><td>Dysphonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001336<a name=\"hpo-HP.580001336\"> </a></td><td>Myoclonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001283<a name=\"hpo-HP.580001283\"> </a></td><td>Bulbar palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002080<a name=\"hpo-HP.580002080\"> </a></td><td>Intention tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002174<a name=\"hpo-HP.580002174\"> </a></td><td>Postural tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002064<a name=\"hpo-HP.580002064\"> </a></td><td>Spastic gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0009800<a name=\"hpo-HP.580009800\"> </a></td><td>Maternal diabetes</td></tr><tr><td style=\"white-space:nowrap\">HP:0001662<a name=\"hpo-HP.580001662\"> </a></td><td>Bradycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006595<a name=\"hpo-HP.580006595\"> </a></td><td>Scapulohumeral synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005815<a name=\"hpo-HP.580005815\"> </a></td><td>Supernumerary ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000307<a name=\"hpo-HP.580000307\"> </a></td><td>Pointed chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0012371<a name=\"hpo-HP.580012371\"> </a></td><td>Hyperplasia of midface</td></tr><tr><td style=\"white-space:nowrap\">HP:0002643<a name=\"hpo-HP.580002643\"> </a></td><td>Neonatal respiratory distress</td></tr><tr><td style=\"white-space:nowrap\">HP:0002093<a name=\"hpo-HP.580002093\"> </a></td><td>Respiratory insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0010310<a name=\"hpo-HP.580010310\"> </a></td><td>Chylothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0006376<a name=\"hpo-HP.580006376\"> </a></td><td>Limited elbow flexion</td></tr><tr><td style=\"white-space:nowrap\">HP:0006467<a name=\"hpo-HP.580006467\"> </a></td><td>Limited shoulder movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010505<a name=\"hpo-HP.580010505\"> </a></td><td>Limitation of movement at ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0010501<a name=\"hpo-HP.580010501\"> </a></td><td>Limitation of knee mobility</td></tr><tr><td style=\"white-space:nowrap\">HP:0009896<a name=\"hpo-HP.580009896\"> </a></td><td>Abnormality of the antitragus</td></tr><tr><td style=\"white-space:nowrap\">HP:0004404<a name=\"hpo-HP.580004404\"> </a></td><td>Abnormal nipple morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011957<a name=\"hpo-HP.580011957\"> </a></td><td>Abnormal pectoral muscle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000777<a name=\"hpo-HP.580000777\"> </a></td><td>Abnormality of the thymus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000418<a name=\"hpo-HP.580000418\"> </a></td><td>Narrow nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0001572<a name=\"hpo-HP.580001572\"> </a></td><td>Macrodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002967<a name=\"hpo-HP.580002967\"> </a></td><td>Cubitus valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000988<a name=\"hpo-HP.580000988\"> </a></td><td>Skin rash</td></tr><tr><td style=\"white-space:nowrap\">HP:0009733<a name=\"hpo-HP.580009733\"> </a></td><td>Glioma</td></tr><tr><td style=\"white-space:nowrap\">HP:0012452<a name=\"hpo-HP.580012452\"> </a></td><td>Restless legs</td></tr><tr><td style=\"white-space:nowrap\">HP:0100031<a name=\"hpo-HP.580100031\"> </a></td><td>Neoplasm of the thyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0030127<a name=\"hpo-HP.580030127\"> </a></td><td>Endometriosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000123<a name=\"hpo-HP.580000123\"> </a></td><td>Nephritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001974<a name=\"hpo-HP.580001974\"> </a></td><td>Leukocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010976<a name=\"hpo-HP.580010976\"> </a></td><td>B lymphocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000010<a name=\"hpo-HP.580000010\"> </a></td><td>Recurrent urinary tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0100807<a name=\"hpo-HP.580100807\"> </a></td><td>Long fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0000653<a name=\"hpo-HP.580000653\"> </a></td><td>Sparse eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0000171<a name=\"hpo-HP.580000171\"> </a></td><td>Microglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002575<a name=\"hpo-HP.580002575\"> </a></td><td>Tracheoesophageal fistula</td></tr><tr><td style=\"white-space:nowrap\">HP:0009933<a name=\"hpo-HP.580009933\"> </a></td><td>Narrow naris</td></tr><tr><td style=\"white-space:nowrap\">HP:0000883<a name=\"hpo-HP.580000883\"> </a></td><td>Thin ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000121<a name=\"hpo-HP.580000121\"> </a></td><td>Nephrocalcinosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001349<a name=\"hpo-HP.580001349\"> </a></td><td>Facial diplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012037<a name=\"hpo-HP.580012037\"> </a></td><td>Pectoralis amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100560<a name=\"hpo-HP.580100560\"> </a></td><td>Upper limb asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0005684<a name=\"hpo-HP.580005684\"> </a></td><td>Distal arthrogryposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010722<a name=\"hpo-HP.580010722\"> </a></td><td>Asymmetry of the ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0009380<a name=\"hpo-HP.580009380\"> </a></td><td>Aplasia of the fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0001657<a name=\"hpo-HP.580001657\"> </a></td><td>Prolonged QT interval</td></tr><tr><td style=\"white-space:nowrap\">HP:0002040<a name=\"hpo-HP.580002040\"> </a></td><td>Esophageal varix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000613<a name=\"hpo-HP.580000613\"> </a></td><td>Photophobia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000561<a name=\"hpo-HP.580000561\"> </a></td><td>Absent eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002223<a name=\"hpo-HP.580002223\"> </a></td><td>Absent eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0002591<a name=\"hpo-HP.580002591\"> </a></td><td>Polyphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002373<a name=\"hpo-HP.580002373\"> </a></td><td>Febrile seizure (within the age range of 3 months to 6 years)</td></tr><tr><td style=\"white-space:nowrap\">HP:0002419<a name=\"hpo-HP.580002419\"> </a></td><td>Molar tooth sign on MRI</td></tr><tr><td style=\"white-space:nowrap\">HP:0001010<a name=\"hpo-HP.580001010\"> </a></td><td>Hypopigmentation of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0005772<a name=\"hpo-HP.580005772\"> </a></td><td>Aplasia/Hypoplasia of the tibia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002211<a name=\"hpo-HP.580002211\"> </a></td><td>White forelock</td></tr><tr><td style=\"white-space:nowrap\">HP:0007126<a name=\"hpo-HP.580007126\"> </a></td><td>Proximal amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003798<a name=\"hpo-HP.580003798\"> </a></td><td>Nemaline bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0006533<a name=\"hpo-HP.580006533\"> </a></td><td>Bronchodysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003391<a name=\"hpo-HP.580003391\"> </a></td><td>Gowers sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0000771<a name=\"hpo-HP.580000771\"> </a></td><td>Gynecomastia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100785<a name=\"hpo-HP.580100785\"> </a></td><td>Insomnia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010529<a name=\"hpo-HP.580010529\"> </a></td><td>Echolalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000363<a name=\"hpo-HP.580000363\"> </a></td><td>Abnormality of earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002612<a name=\"hpo-HP.580002612\"> </a></td><td>Congenital hepatic fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006721<a name=\"hpo-HP.580006721\"> </a></td><td>Acute lymphoblastic leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001958<a name=\"hpo-HP.580001958\"> </a></td><td>Nonketotic hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003457<a name=\"hpo-HP.580003457\"> </a></td><td>EMG abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0010636<a name=\"hpo-HP.580010636\"> </a></td><td>Schizencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005266<a name=\"hpo-HP.580005266\"> </a></td><td>Intestinal polyp</td></tr><tr><td style=\"white-space:nowrap\">HP:0200063<a name=\"hpo-HP.580200063\"> </a></td><td>Colorectal polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001762<a name=\"hpo-HP.580001762\"> </a></td><td>Talipes equinovarus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000056<a name=\"hpo-HP.580000056\"> </a></td><td>Abnormality of the clitoris</td></tr><tr><td style=\"white-space:nowrap\">HP:0008655<a name=\"hpo-HP.580008655\"> </a></td><td>Aplasia/Hypoplasia of the fallopian tube</td></tr><tr><td style=\"white-space:nowrap\">HP:0002072<a name=\"hpo-HP.580002072\"> </a></td><td>Chorea</td></tr><tr><td style=\"white-space:nowrap\">HP:0008734<a name=\"hpo-HP.580008734\"> </a></td><td>Decreased testicular size</td></tr><tr><td style=\"white-space:nowrap\">HP:0002136<a name=\"hpo-HP.580002136\"> </a></td><td>Broad-based gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0010958<a name=\"hpo-HP.580010958\"> </a></td><td>Bilateral renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002510<a name=\"hpo-HP.580002510\"> </a></td><td>Spastic tetraplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003234<a name=\"hpo-HP.580003234\"> </a></td><td>Decreased plasma carnitine</td></tr><tr><td style=\"white-space:nowrap\">HP:0000720<a name=\"hpo-HP.580000720\"> </a></td><td>Mood swings</td></tr><tr><td style=\"white-space:nowrap\">HP:0012638<a name=\"hpo-HP.580012638\"> </a></td><td>Abnormal nervous system physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002803<a name=\"hpo-HP.580002803\"> </a></td><td>Congenital contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0000152<a name=\"hpo-HP.580000152\"> </a></td><td>Abnormality of head or neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0004377<a name=\"hpo-HP.580004377\"> </a></td><td>Hematological neoplasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0100006<a name=\"hpo-HP.580100006\"> </a></td><td>Neoplasm of the central nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0012759<a name=\"hpo-HP.580012759\"> </a></td><td>Neurodevelopmental abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0011805<a name=\"hpo-HP.580011805\"> </a></td><td>Abnormal skeletal muscle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003634<a name=\"hpo-HP.580003634\"> </a></td><td>Amyoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001507<a name=\"hpo-HP.580001507\"> </a></td><td>Growth abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001939<a name=\"hpo-HP.580001939\"> </a></td><td>Abnormality of metabolism/homeostasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011013<a name=\"hpo-HP.580011013\"> </a></td><td>Abnormal circulating carbohydrate concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0410008<a name=\"hpo-HP.580410008\"> </a></td><td>Abnormality of the peripheral nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0200134<a name=\"hpo-HP.580200134\"> </a></td><td>Epileptic encephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001881<a name=\"hpo-HP.580001881\"> </a></td><td>Abnormal leukocyte morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0005549<a name=\"hpo-HP.580005549\"> </a></td><td>obsolete Congenital neutropenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004439<a name=\"hpo-HP.580004439\"> </a></td><td>Craniofacial dysostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012443<a name=\"hpo-HP.580012443\"> </a></td><td>Abnormality of brain morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000202<a name=\"hpo-HP.580000202\"> </a></td><td>Oral cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0011842<a name=\"hpo-HP.580011842\"> </a></td><td>Abnormality of skeletal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003808<a name=\"hpo-HP.580003808\"> </a></td><td>Abnormal muscle tone</td></tr><tr><td style=\"white-space:nowrap\">HP:0001574<a name=\"hpo-HP.580001574\"> </a></td><td>Abnormality of the integument</td></tr><tr><td style=\"white-space:nowrap\">HP:0030056<a name=\"hpo-HP.580030056\"> </a></td><td>Uncombable hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0003549<a name=\"hpo-HP.580003549\"> </a></td><td>Abnormality of connective tissue</td></tr><tr><td style=\"white-space:nowrap\">HP:0030875<a name=\"hpo-HP.580030875\"> </a></td><td>Abnormality of pulmonary circulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000118<a name=\"hpo-HP.580000118\"> </a></td><td>Phenotypic abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0012469<a name=\"hpo-HP.580012469\"> </a></td><td>Infantile spasms</td></tr><tr><td style=\"white-space:nowrap\">HP:0032894<a name=\"hpo-HP.580032894\"> </a></td><td>Seizure precipitated by febrile infection</td></tr><tr><td style=\"white-space:nowrap\">HP:0100661<a name=\"hpo-HP.580100661\"> </a></td><td>Trigeminal neuralgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012207<a name=\"hpo-HP.580012207\"> </a></td><td>Reduced sperm motility</td></tr><tr><td style=\"white-space:nowrap\">HP:0000798<a name=\"hpo-HP.580000798\"> </a></td><td>Oligospermia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012864<a name=\"hpo-HP.580012864\"> </a></td><td>Abnormal sperm morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008232<a name=\"hpo-HP.580008232\"> </a></td><td>Elevated circulating follicle stimulating hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0040306<a name=\"hpo-HP.580040306\"> </a></td><td>Decreased male libido</td></tr><tr><td style=\"white-space:nowrap\">HP:0012208<a name=\"hpo-HP.580012208\"> </a></td><td>Immotile sperm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000027<a name=\"hpo-HP.580000027\"> </a></td><td>Azoospermia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000870<a name=\"hpo-HP.580000870\"> </a></td><td>Increased circulating prolactin concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0008187<a name=\"hpo-HP.580008187\"> </a></td><td>Absence of secondary sex characteristics</td></tr><tr><td style=\"white-space:nowrap\">HP:0010469<a name=\"hpo-HP.580010469\"> </a></td><td>Absent testis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011969<a name=\"hpo-HP.580011969\"> </a></td><td>Elevated circulating luteinizing hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0040171<a name=\"hpo-HP.580040171\"> </a></td><td>Decreased serum testosterone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0003251<a name=\"hpo-HP.580003251\"> </a></td><td>Male infertility</td></tr><tr><td style=\"white-space:nowrap\">HP:0009804<a name=\"hpo-HP.580009804\"> </a></td><td>Reduced number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000548<a name=\"hpo-HP.580000548\"> </a></td><td>Cone/cone-rod dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000546<a name=\"hpo-HP.580000546\"> </a></td><td>Retinal degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0008002<a name=\"hpo-HP.580008002\"> </a></td><td>Abnormality of macular pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000608<a name=\"hpo-HP.580000608\"> </a></td><td>Macular degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0030611<a name=\"hpo-HP.580030611\"> </a></td><td>Retinal pigment epithelial loss on macular OCT</td></tr><tr><td style=\"white-space:nowrap\">HP:0001135<a name=\"hpo-HP.580001135\"> </a></td><td>Chorioretinal dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030468<a name=\"hpo-HP.580030468\"> </a></td><td>Abnormal multifocal electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:00030532<a name=\"hpo-HP.5800030532\"> </a></td><td>Visual acuity test abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0007401<a name=\"hpo-HP.580007401\"> </a></td><td>Macular atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030466<a name=\"hpo-HP.580030466\"> </a></td><td>Abnormal full-field electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:007737<a name=\"hpo-HP.58007737\"> </a></td><td>Bone spicule pigmentation of the retina</td></tr><tr><td style=\"white-space:nowrap\">HP:0011342<a name=\"hpo-HP.580011342\"> </a></td><td>Mild global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0030610<a name=\"hpo-HP.580030610\"> </a></td><td>Photoreceptor outer segment loss on macular OCT</td></tr><tr><td style=\"white-space:nowrap\">HP:0007722<a name=\"hpo-HP.580007722\"> </a></td><td>Retinal pigment epithelial atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030493<a name=\"hpo-HP.580030493\"> </a></td><td>Abnormality of foveal pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0007843<a name=\"hpo-HP.580007843\"> </a></td><td>Attenuation of retinal blood vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0007754<a name=\"hpo-HP.580007754\"> </a></td><td>Macular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011509<a name=\"hpo-HP.580011509\"> </a></td><td>Macular hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0008527<a name=\"hpo-HP.580008527\"> </a></td><td>Congenital sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0200070<a name=\"hpo-HP.580200070\"> </a></td><td>Peripheral retinal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0007793<a name=\"hpo-HP.580007793\"> </a></td><td>Granular macular appearance</td></tr><tr><td style=\"white-space:nowrap\">HP:0007987<a name=\"hpo-HP.580007987\"> </a></td><td>Progressive visual field defects</td></tr><tr><td style=\"white-space:nowrap\">HP:0100817<a name=\"hpo-HP.580100817\"> </a></td><td>Renovascular hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0007868<a name=\"hpo-HP.580007868\"> </a></td><td>obsolete Age-related macular degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0030527<a name=\"hpo-HP.580030527\"> </a></td><td>Very severe constriction of peripheral visual field</td></tr><tr><td style=\"white-space:nowrap\">HP:0030551<a name=\"hpo-HP.580030551\"> </a></td><td>Visual acuity light perception with projection</td></tr><tr><td style=\"white-space:nowrap\">HP:0011505<a name=\"hpo-HP.580011505\"> </a></td><td>Cystoid macular edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0010442<a name=\"hpo-HP.580010442\"> </a></td><td>Polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0007642<a name=\"hpo-HP.580007642\"> </a></td><td>Congenital stationary night blindness</td></tr><tr><td style=\"white-space:nowrap\">HP:0009073<a name=\"hpo-HP.580009073\"> </a></td><td>Progressive proximal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003741<a name=\"hpo-HP.580003741\"> </a></td><td>Congenital muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100299<a name=\"hpo-HP.580100299\"> </a></td><td>Muscle fiber inclusion bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0003540<a name=\"hpo-HP.580003540\"> </a></td><td>Impaired platelet aggregation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010489<a name=\"hpo-HP.580010489\"> </a></td><td>Absent palmar crease</td></tr><tr><td style=\"white-space:nowrap\">HP:0009824<a name=\"hpo-HP.580009824\"> </a></td><td>Upper limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002395<a name=\"hpo-HP.580002395\"> </a></td><td>Lower limb hyperreflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001138<a name=\"hpo-HP.580001138\"> </a></td><td>Optic neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0007103<a name=\"hpo-HP.580007103\"> </a></td><td>Hypointensity of cerebral white matter on MRI</td></tr><tr><td style=\"white-space:nowrap\">HP:0003458<a name=\"hpo-HP.580003458\"> </a></td><td>EMG: myopathic abnormalities</td></tr><tr><td style=\"white-space:nowrap\">HP:0002987<a name=\"hpo-HP.580002987\"> </a></td><td>Elbow flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0006466<a name=\"hpo-HP.580006466\"> </a></td><td>Ankle flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0008458<a name=\"hpo-HP.580008458\"> </a></td><td>Progressive congenital scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000473<a name=\"hpo-HP.580000473\"> </a></td><td>Torticollis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011800<a name=\"hpo-HP.580011800\"> </a></td><td>Midface retrusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000597<a name=\"hpo-HP.580000597\"> </a></td><td>Ophthalmoparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005853<a name=\"hpo-HP.580005853\"> </a></td><td>Congenital foot contraction deformities</td></tr><tr><td style=\"white-space:nowrap\">HP:0007002<a name=\"hpo-HP.580007002\"> </a></td><td>Motor axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003327<a name=\"hpo-HP.580003327\"> </a></td><td>Axial muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003306<a name=\"hpo-HP.580003306\"> </a></td><td>Spinal rigidity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002068<a name=\"hpo-HP.580002068\"> </a></td><td>Neuromuscular dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001002<a name=\"hpo-HP.580001002\"> </a></td><td>obsolete Decreased subcutaneous fat</td></tr><tr><td style=\"white-space:nowrap\">HP:0002880<a name=\"hpo-HP.580002880\"> </a></td><td>obsolete Respiratory difficulties</td></tr><tr><td style=\"white-space:nowrap\">HP:0006829<a name=\"hpo-HP.580006829\"> </a></td><td>Severe muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011448<a name=\"hpo-HP.580011448\"> </a></td><td>Ankle clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0003487<a name=\"hpo-HP.580003487\"> </a></td><td>Babinski sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0002378<a name=\"hpo-HP.580002378\"> </a></td><td>Hand tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002747<a name=\"hpo-HP.580002747\"> </a></td><td>Respiratory insufficiency due to muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002579<a name=\"hpo-HP.580002579\"> </a></td><td>Gastrointestinal dysmotility</td></tr><tr><td style=\"white-space:nowrap\">HP:0001041<a name=\"hpo-HP.580001041\"> </a></td><td>Facial erythema</td></tr><tr><td style=\"white-space:nowrap\">HP:0040180<a name=\"hpo-HP.580040180\"> </a></td><td>Hyperkeratosis pilaris</td></tr><tr><td style=\"white-space:nowrap\">HP:0001382<a name=\"hpo-HP.580001382\"> </a></td><td>Joint hypermobility</td></tr><tr><td style=\"white-space:nowrap\">HP:0003722<a name=\"hpo-HP.580003722\"> </a></td><td>Neck flexor weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003323<a name=\"hpo-HP.580003323\"> </a></td><td>Progressive muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002380<a name=\"hpo-HP.580002380\"> </a></td><td>Fasciculations</td></tr><tr><td style=\"white-space:nowrap\">HP:0012785<a name=\"hpo-HP.580012785\"> </a></td><td>Flexion contracture of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0007936<a name=\"hpo-HP.580007936\"> </a></td><td>Restrictive external ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030319<a name=\"hpo-HP.580030319\"> </a></td><td>Weakness of facial musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0008936<a name=\"hpo-HP.580008936\"> </a></td><td>Muscular hypotonia of the trunk</td></tr><tr><td style=\"white-space:nowrap\">HP:0030230<a name=\"hpo-HP.580030230\"> </a></td><td>Central core regions in muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0011471<a name=\"hpo-HP.580011471\"> </a></td><td>Gastrostomy tube feeding in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001290<a name=\"hpo-HP.580001290\"> </a></td><td>Generalized hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002421<a name=\"hpo-HP.580002421\"> </a></td><td>Poor head control</td></tr><tr><td style=\"white-space:nowrap\">HP:0010301<a name=\"hpo-HP.580010301\"> </a></td><td>Spinal dysraphism</td></tr><tr><td style=\"white-space:nowrap\">HP:0004303<a name=\"hpo-HP.580004303\"> </a></td><td>Abnormal muscle fiber morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009046<a name=\"hpo-HP.580009046\"> </a></td><td>Difficulty running</td></tr><tr><td style=\"white-space:nowrap\">HP:0003715<a name=\"hpo-HP.580003715\"> </a></td><td>Myofibrillar myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000467<a name=\"hpo-HP.580000467\"> </a></td><td>Neck muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001999<a name=\"hpo-HP.580001999\"> </a></td><td>Abnormal facial shape</td></tr><tr><td style=\"white-space:nowrap\">HP:0002751<a name=\"hpo-HP.580002751\"> </a></td><td>Kyphoscoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030223<a name=\"hpo-HP.580030223\"> </a></td><td>Perseveration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002344<a name=\"hpo-HP.580002344\"> </a></td><td>Progressive neurologic deterioration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002522<a name=\"hpo-HP.580002522\"> </a></td><td>Areflexia of lower limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0003805<a name=\"hpo-HP.580003805\"> </a></td><td>Rimmed vacuoles</td></tr><tr><td style=\"white-space:nowrap\">HP:0005781<a name=\"hpo-HP.580005781\"> </a></td><td>Contractures of the large joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0040083<a name=\"hpo-HP.580040083\"> </a></td><td>Toe walking</td></tr><tr><td style=\"white-space:nowrap\">HP:0003749<a name=\"hpo-HP.580003749\"> </a></td><td>Pelvic girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0012444<a name=\"hpo-HP.580012444\"> </a></td><td>Brain atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003738<a name=\"hpo-HP.580003738\"> </a></td><td>Exercise-induced myalgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003756<a name=\"hpo-HP.580003756\"> </a></td><td>Skeletal myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002492<a name=\"hpo-HP.580002492\"> </a></td><td>Morphological abnormality of the corticospinal tract</td></tr><tr><td style=\"white-space:nowrap\">HP:0100302<a name=\"hpo-HP.580100302\"> </a></td><td>Muscle fiber tubuloreticular inclusions</td></tr><tr><td style=\"white-space:nowrap\">HP:0006817<a name=\"hpo-HP.580006817\"> </a></td><td>Aplasia/Hypoplasia of the cerebellar vermis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003473<a name=\"hpo-HP.580003473\"> </a></td><td>Fatigable weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002077<a name=\"hpo-HP.580002077\"> </a></td><td>Migraine with aura</td></tr><tr><td style=\"white-space:nowrap\">HP:0100559<a name=\"hpo-HP.580100559\"> </a></td><td>Lower limb asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0002079<a name=\"hpo-HP.580002079\"> </a></td><td>Hypoplasia of the corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002804<a name=\"hpo-HP.580002804\"> </a></td><td>Arthrogryposis multiplex congenita</td></tr><tr><td style=\"white-space:nowrap\">HP:0011623<a name=\"hpo-HP.580011623\"> </a></td><td>Muscular ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002191<a name=\"hpo-HP.580002191\"> </a></td><td>Progressive spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003390<a name=\"hpo-HP.580003390\"> </a></td><td>Sensory axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006986<a name=\"hpo-HP.580006986\"> </a></td><td>Upper limb spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002464<a name=\"hpo-HP.580002464\"> </a></td><td>Spastic dysarthria</td></tr><tr><td style=\"white-space:nowrap\">HP:0001308<a name=\"hpo-HP.580001308\"> </a></td><td>Tongue fasciculations</td></tr><tr><td style=\"white-space:nowrap\">HP:0007010<a name=\"hpo-HP.580007010\"> </a></td><td>Poor fine motor coordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0003737<a name=\"hpo-HP.580003737\"> </a></td><td>Mitochondrial myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0008012<a name=\"hpo-HP.580008012\"> </a></td><td>obsolete Congenital myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008872<a name=\"hpo-HP.580008872\"> </a></td><td>Feeding difficulties in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005750<a name=\"hpo-HP.580005750\"> </a></td><td>Contractures of the joints of the lower limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0009067<a name=\"hpo-HP.580009067\"> </a></td><td>Progressive spinal muscular atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001623<a name=\"hpo-HP.580001623\"> </a></td><td>Breech presentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001374<a name=\"hpo-HP.580001374\"> </a></td><td>Congenital hip dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002359<a name=\"hpo-HP.580002359\"> </a></td><td>Frequent falls</td></tr><tr><td style=\"white-space:nowrap\">HP:0003803<a name=\"hpo-HP.580003803\"> </a></td><td>Type 1 muscle fiber predominance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011410<a name=\"hpo-HP.580011410\"> </a></td><td>Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0008947<a name=\"hpo-HP.580008947\"> </a></td><td>Infantile muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100501<a name=\"hpo-HP.580100501\"> </a></td><td>Recurrent bronchiolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003789<a name=\"hpo-HP.580003789\"> </a></td><td>Minicore myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000544<a name=\"hpo-HP.580000544\"> </a></td><td>External ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001605<a name=\"hpo-HP.580001605\"> </a></td><td>Vocal cord paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003712<a name=\"hpo-HP.580003712\"> </a></td><td>Skeletal muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0012507<a name=\"hpo-HP.580012507\"> </a></td><td>Weakness of orbicularis oculi muscle</td></tr><tr><td style=\"white-space:nowrap\">HP:0009816<a name=\"hpo-HP.580009816\"> </a></td><td>Lower limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0008935<a name=\"hpo-HP.580008935\"> </a></td><td>Generalized neonatal hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003484<a name=\"hpo-HP.580003484\"> </a></td><td>Upper limb muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0008331<a name=\"hpo-HP.580008331\"> </a></td><td>Elevated creatine kinase after exercise</td></tr><tr><td style=\"white-space:nowrap\">HP:0001315<a name=\"hpo-HP.580001315\"> </a></td><td>Reduced tendon reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0012473<a name=\"hpo-HP.580012473\"> </a></td><td>Tongue atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003273<a name=\"hpo-HP.580003273\"> </a></td><td>Hip contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0006380<a name=\"hpo-HP.580006380\"> </a></td><td>Knee flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0003752<a name=\"hpo-HP.580003752\"> </a></td><td>Episodic flaccid weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0100298<a name=\"hpo-HP.580100298\"> </a></td><td>Motheaten muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0003693<a name=\"hpo-HP.580003693\"> </a></td><td>Distal amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002167<a name=\"hpo-HP.580002167\"> </a></td><td>Neurological speech impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0003388<a name=\"hpo-HP.580003388\"> </a></td><td>Easy fatigability</td></tr><tr><td style=\"white-space:nowrap\">HP:0001348<a name=\"hpo-HP.580001348\"> </a></td><td>Brisk reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0003445<a name=\"hpo-HP.580003445\"> </a></td><td>EMG: neuropathic changes</td></tr><tr><td style=\"white-space:nowrap\">HP:0009063<a name=\"hpo-HP.580009063\"> </a></td><td>Progressive distal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003720<a name=\"hpo-HP.580003720\"> </a></td><td>Generalized muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002493<a name=\"hpo-HP.580002493\"> </a></td><td>Upper motor neuron dysfunction</td></tr><tr><td style=\"white-space:nowrap\">HP:0012448<a name=\"hpo-HP.580012448\"> </a></td><td>Delayed myelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0001338<a name=\"hpo-HP.580001338\"> </a></td><td>Partial agenesis of the corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0006879<a name=\"hpo-HP.580006879\"> </a></td><td>Pontocerebellar atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0200101<a name=\"hpo-HP.580200101\"> </a></td><td>Decreased/absent ankle reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0009020<a name=\"hpo-HP.580009020\"> </a></td><td>Exercise-induced muscle fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002067<a name=\"hpo-HP.580002067\"> </a></td><td>Bradykinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012751<a name=\"hpo-HP.580012751\"> </a></td><td>Abnormal basal ganglia MRI signal intensity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003355<a name=\"hpo-HP.580003355\"> </a></td><td>Aminoaciduria</td></tr><tr><td style=\"white-space:nowrap\">HP:0012450<a name=\"hpo-HP.580012450\"> </a></td><td>Chronic constipation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011834<a name=\"hpo-HP.580011834\"> </a></td><td>Moyamoya phenomenon</td></tr><tr><td style=\"white-space:nowrap\">HP:0001297<a name=\"hpo-HP.580001297\"> </a></td><td>Stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0200049<a name=\"hpo-HP.580200049\"> </a></td><td>Upper limb hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008981<a name=\"hpo-HP.580008981\"> </a></td><td>Calf muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006785<a name=\"hpo-HP.580006785\"> </a></td><td>Limb-girdle muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006957<a name=\"hpo-HP.580006957\"> </a></td><td>Loss of ability to walk</td></tr><tr><td style=\"white-space:nowrap\">HP:0030098<a name=\"hpo-HP.580030098\"> </a></td><td>Reduced muscle dystrophin expression</td></tr><tr><td style=\"white-space:nowrap\">HP:0030115<a name=\"hpo-HP.580030115\"> </a></td><td>Reduced muscle fiber dysferlin</td></tr><tr><td style=\"white-space:nowrap\">HP:0002058<a name=\"hpo-HP.580002058\"> </a></td><td>Myopathic facies</td></tr><tr><td style=\"white-space:nowrap\">HP:0007858<a name=\"hpo-HP.580007858\"> </a></td><td>Chorioretinal lacunae</td></tr><tr><td style=\"white-space:nowrap\">HP:0006657<a name=\"hpo-HP.580006657\"> </a></td><td>Hypoplasia of first ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0007165<a name=\"hpo-HP.580007165\"> </a></td><td>Periventricular heterotopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0009779<a name=\"hpo-HP.580009779\"> </a></td><td>3-4 toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010665<a name=\"hpo-HP.580010665\"> </a></td><td>Bilateral coxa valga</td></tr><tr><td style=\"white-space:nowrap\">HP:0007598<a name=\"hpo-HP.580007598\"> </a></td><td>Bilateral single transverse palmar creases</td></tr><tr><td style=\"white-space:nowrap\">HP:0006101<a name=\"hpo-HP.580006101\"> </a></td><td>Finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010511<a name=\"hpo-HP.580010511\"> </a></td><td>Long toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002370<a name=\"hpo-HP.580002370\"> </a></td><td>Poor coordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0000480<a name=\"hpo-HP.580000480\"> </a></td><td>Retinal coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001770<a name=\"hpo-HP.580001770\"> </a></td><td>Toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010851<a name=\"hpo-HP.580010851\"> </a></td><td>EEG with burst suppression</td></tr><tr><td style=\"white-space:nowrap\">HP:0002791<a name=\"hpo-HP.580002791\"> </a></td><td>Hypoventilation</td></tr><tr><td style=\"white-space:nowrap\">HP:0040075<a name=\"hpo-HP.580040075\"> </a></td><td>Hypopituitarism</td></tr><tr><td style=\"white-space:nowrap\">HP:0012506<a name=\"hpo-HP.580012506\"> </a></td><td>Small pituitary gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000538<a name=\"hpo-HP.580000538\"> </a></td><td>Pseudopapilledema</td></tr><tr><td style=\"white-space:nowrap\">HP:0012717<a name=\"hpo-HP.580012717\"> </a></td><td>Severe conductive hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001370<a name=\"hpo-HP.580001370\"> </a></td><td>Rheumatoid arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000016<a name=\"hpo-HP.580000016\"> </a></td><td>Urinary retention</td></tr><tr><td style=\"white-space:nowrap\">HP:0012537<a name=\"hpo-HP.580012537\"> </a></td><td>Food intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011297<a name=\"hpo-HP.580011297\"> </a></td><td>Abnormal digit morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001273<a name=\"hpo-HP.580001273\"> </a></td><td>Abnormal corpus callosum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0030148<a name=\"hpo-HP.580030148\"> </a></td><td>Heart murmur</td></tr><tr><td style=\"white-space:nowrap\">HP:0045018<a name=\"hpo-HP.580045018\"> </a></td><td>Partial duplication of eyebrows</td></tr><tr><td style=\"white-space:nowrap\">HP:0008998<a name=\"hpo-HP.580008998\"> </a></td><td>Pectoralis hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001707<a name=\"hpo-HP.580001707\"> </a></td><td>Abnormal right ventricle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001540<a name=\"hpo-HP.580001540\"> </a></td><td>Diastasis recti</td></tr><tr><td style=\"white-space:nowrap\">HP:0100693<a name=\"hpo-HP.580100693\"> </a></td><td>Iridodonesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002265<a name=\"hpo-HP.580002265\"> </a></td><td>Large fleshy ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001132<a name=\"hpo-HP.580001132\"> </a></td><td>Lens subluxation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004927<a name=\"hpo-HP.580004927\"> </a></td><td>Pulmonary artery dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005619<a name=\"hpo-HP.580005619\"> </a></td><td>Thoracolumbar kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008619<a name=\"hpo-HP.580008619\"> </a></td><td>Bilateral sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001045<a name=\"hpo-HP.580001045\"> </a></td><td>Vitiligo</td></tr><tr><td style=\"white-space:nowrap\">HP:0009124<a name=\"hpo-HP.580009124\"> </a></td><td>Abnormal adipose tissue morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002979<a name=\"hpo-HP.580002979\"> </a></td><td>Bowing of the legs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000455<a name=\"hpo-HP.580000455\"> </a></td><td>Broad nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001007<a name=\"hpo-HP.580001007\"> </a></td><td>Hirsutism</td></tr><tr><td style=\"white-space:nowrap\">HP:0010314<a name=\"hpo-HP.580010314\"> </a></td><td>Premature thelarche</td></tr><tr><td style=\"white-space:nowrap\">HP:0000075<a name=\"hpo-HP.580000075\"> </a></td><td>Renal duplication</td></tr><tr><td style=\"white-space:nowrap\">HP:0000368<a name=\"hpo-HP.580000368\"> </a></td><td>Low-set, posteriorly rotated ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001052<a name=\"hpo-HP.580001052\"> </a></td><td>Nevus flammeus</td></tr><tr><td style=\"white-space:nowrap\">HP:0200048<a name=\"hpo-HP.580200048\"> </a></td><td>Cyanotic episode</td></tr><tr><td style=\"white-space:nowrap\">HP:0001902<a name=\"hpo-HP.580001902\"> </a></td><td>Giant platelets</td></tr><tr><td style=\"white-space:nowrap\">HP:0030043<a name=\"hpo-HP.580030043\"> </a></td><td>Hip subluxation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002938<a name=\"hpo-HP.580002938\"> </a></td><td>Lumbar hyperlordosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030084<a name=\"hpo-HP.580030084\"> </a></td><td>Clinodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005560<a name=\"hpo-HP.580005560\"> </a></td><td>Imbalanced hemoglobin synthesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001539<a name=\"hpo-HP.580001539\"> </a></td><td>Omphalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0009778<a name=\"hpo-HP.580009778\"> </a></td><td>Short thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002277<a name=\"hpo-HP.580002277\"> </a></td><td>Horner syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0011701<a name=\"hpo-HP.580011701\"> </a></td><td>Multifocal atrial tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005274<a name=\"hpo-HP.580005274\"> </a></td><td>Prominent nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001262<a name=\"hpo-HP.580001262\"> </a></td><td>Excessive daytime somnolence</td></tr><tr><td style=\"white-space:nowrap\">HP:0001285<a name=\"hpo-HP.580001285\"> </a></td><td>Spastic tetraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012171<a name=\"hpo-HP.580012171\"> </a></td><td>Stereotypical hand wringing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002518<a name=\"hpo-HP.580002518\"> </a></td><td>Abnormality of the periventricular white matter</td></tr><tr><td style=\"white-space:nowrap\">HP:0005692<a name=\"hpo-HP.580005692\"> </a></td><td>Joint hyperflexibility</td></tr><tr><td style=\"white-space:nowrap\">HP:0007440<a name=\"hpo-HP.580007440\"> </a></td><td>Generalized hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001805<a name=\"hpo-HP.580001805\"> </a></td><td>Onychogryposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011945<a name=\"hpo-HP.580011945\"> </a></td><td>Bronchiolitis obliterans organizing pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003763<a name=\"hpo-HP.580003763\"> </a></td><td>Bruxism</td></tr><tr><td style=\"white-space:nowrap\">HP:0010500<a name=\"hpo-HP.580010500\"> </a></td><td>Hyperextensibility of the knee</td></tr><tr><td style=\"white-space:nowrap\">HP:0040115<a name=\"hpo-HP.580040115\"> </a></td><td>Abnormality of the Eustachian tube</td></tr><tr><td style=\"white-space:nowrap\">HP:0008751<a name=\"hpo-HP.580008751\"> </a></td><td>Laryngeal cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0000403<a name=\"hpo-HP.580000403\"> </a></td><td>Recurrent otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0001787<a name=\"hpo-HP.580001787\"> </a></td><td>Abnormal delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0002571<a name=\"hpo-HP.580002571\"> </a></td><td>Achalasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002615<a name=\"hpo-HP.580002615\"> </a></td><td>Hypotension</td></tr><tr><td style=\"white-space:nowrap\">HP:0003550<a name=\"hpo-HP.580003550\"> </a></td><td>Predominantly lower limb lymphedema</td></tr><tr><td style=\"white-space:nowrap\">HP:0030363<a name=\"hpo-HP.580030363\"> </a></td><td>Primary Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0001727<a name=\"hpo-HP.580001727\"> </a></td><td>Thromboembolic stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0100603<a name=\"hpo-HP.580100603\"> </a></td><td>Toxemia of pregnancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0010836<a name=\"hpo-HP.580010836\"> </a></td><td>Abnormal circulating copper concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0000356<a name=\"hpo-HP.580000356\"> </a></td><td>Abnormality of the outer ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0002197<a name=\"hpo-HP.580002197\"> </a></td><td>Generalized-onset seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011436<a name=\"hpo-HP.580011436\"> </a></td><td>Abnormal maternal serum screening</td></tr><tr><td style=\"white-space:nowrap\">HP:0003517<a name=\"hpo-HP.580003517\"> </a></td><td>Birth length greater than 97th percentile</td></tr><tr><td style=\"white-space:nowrap\">HP:0003561<a name=\"hpo-HP.580003561\"> </a></td><td>Birth length less than 3rd percentile</td></tr><tr><td style=\"white-space:nowrap\">HP:0012188<a name=\"hpo-HP.580012188\"> </a></td><td>Hyperemesis gravidarum</td></tr><tr><td style=\"white-space:nowrap\">HP:0010519<a name=\"hpo-HP.580010519\"> </a></td><td>Increased fetal movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0030244<a name=\"hpo-HP.580030244\"> </a></td><td>Maternal fever in pregnancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0008071<a name=\"hpo-HP.580008071\"> </a></td><td>Maternal hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0100622<a name=\"hpo-HP.580100622\"> </a></td><td>Maternal seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011438<a name=\"hpo-HP.580011438\"> </a></td><td>Maternal teratogenic exposure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001998<a name=\"hpo-HP.580001998\"> </a></td><td>Neonatal hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0040187<a name=\"hpo-HP.580040187\"> </a></td><td>Neonatal sepsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002033<a name=\"hpo-HP.580002033\"> </a></td><td>Poor suck</td></tr><tr><td style=\"white-space:nowrap\">HP:0006579<a name=\"hpo-HP.580006579\"> </a></td><td>Prolonged neonatal jaundice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001724<a name=\"hpo-HP.580001724\"> </a></td><td>obsolete Aortic dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010621<a name=\"hpo-HP.580010621\"> </a></td><td>Cutaneous syndactyly of toes</td></tr><tr><td style=\"white-space:nowrap\">HP:0001880<a name=\"hpo-HP.580001880\"> </a></td><td>Eosinophilia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000162<a name=\"hpo-HP.580000162\"> </a></td><td>Glossoptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100578<a name=\"hpo-HP.580100578\"> </a></td><td>Lipoatrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002562<a name=\"hpo-HP.580002562\"> </a></td><td>Low-set nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0012893<a name=\"hpo-HP.580012893\"> </a></td><td>Neck muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001027<a name=\"hpo-HP.580001027\"> </a></td><td>Soft, doughy skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0100738<a name=\"hpo-HP.580100738\"> </a></td><td>Abnormal eating behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0007328<a name=\"hpo-HP.580007328\"> </a></td><td>Impaired pain sensation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002878<a name=\"hpo-HP.580002878\"> </a></td><td>Respiratory failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001776<a name=\"hpo-HP.580001776\"> </a></td><td>Bilateral talipes equinovarus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001360<a name=\"hpo-HP.580001360\"> </a></td><td>Holoprosencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001973<a name=\"hpo-HP.580001973\"> </a></td><td>Autoimmune thrombocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100749<a name=\"hpo-HP.580100749\"> </a></td><td>Chest pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0012531<a name=\"hpo-HP.580012531\"> </a></td><td>Pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0007585<a name=\"hpo-HP.580007585\"> </a></td><td>Skin fragility with non-scarring blistering</td></tr><tr><td style=\"white-space:nowrap\">HP:0002108<a name=\"hpo-HP.580002108\"> </a></td><td>Spontaneous pneumothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0006562<a name=\"hpo-HP.580006562\"> </a></td><td>Viral hepatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012647<a name=\"hpo-HP.580012647\"> </a></td><td>Abnormal inflammatory response</td></tr><tr><td style=\"white-space:nowrap\">HP:0012088<a name=\"hpo-HP.580012088\"> </a></td><td>Abnormal urinary odor</td></tr><tr><td style=\"white-space:nowrap\">HP:0011458<a name=\"hpo-HP.580011458\"> </a></td><td>Abdominal symptom</td></tr><tr><td style=\"white-space:nowrap\">HP:0002829<a name=\"hpo-HP.580002829\"> </a></td><td>Arthralgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010783<a name=\"hpo-HP.580010783\"> </a></td><td>Erythema</td></tr><tr><td style=\"white-space:nowrap\">HP:0010307<a name=\"hpo-HP.580010307\"> </a></td><td>Stridor</td></tr><tr><td style=\"white-space:nowrap\">HP:0001269<a name=\"hpo-HP.580001269\"> </a></td><td>Hemiparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006532<a name=\"hpo-HP.580006532\"> </a></td><td>Recurrent pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002580<a name=\"hpo-HP.580002580\"> </a></td><td>Volvulus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012387<a name=\"hpo-HP.580012387\"> </a></td><td>Bronchitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001266<a name=\"hpo-HP.580001266\"> </a></td><td>Choreoathetosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001531<a name=\"hpo-HP.580001531\"> </a></td><td>Failure to thrive in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011470<a name=\"hpo-HP.580011470\"> </a></td><td>Nasogastric tube feeding in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001361<a name=\"hpo-HP.580001361\"> </a></td><td>Nystagmus-induced head nodding</td></tr><tr><td style=\"white-space:nowrap\">HP:0001997<a name=\"hpo-HP.580001997\"> </a></td><td>Gout</td></tr><tr><td style=\"white-space:nowrap\">HP:0000965<a name=\"hpo-HP.580000965\"> </a></td><td>Cutis marmorata</td></tr><tr><td style=\"white-space:nowrap\">HP:0010316<a name=\"hpo-HP.580010316\"> </a></td><td>Ebstein anomaly of the tricuspid valve</td></tr><tr><td style=\"white-space:nowrap\">HP:0010543<a name=\"hpo-HP.580010543\"> </a></td><td>Opsoclonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0007704<a name=\"hpo-HP.580007704\"> </a></td><td>Paroxysmal involuntary eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0030364<a name=\"hpo-HP.580030364\"> </a></td><td>Secondary Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0007738<a name=\"hpo-HP.580007738\"> </a></td><td>Uncontrolled eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0030366<a name=\"hpo-HP.580030366\"> </a></td><td>Delivery by Odon device</td></tr><tr><td style=\"white-space:nowrap\">HP:0011411<a name=\"hpo-HP.580011411\"> </a></td><td>Forceps delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0030369<a name=\"hpo-HP.580030369\"> </a></td><td>Induced vaginal delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0005268<a name=\"hpo-HP.580005268\"> </a></td><td>Spontaneous abortion</td></tr><tr><td style=\"white-space:nowrap\">HP:0030365<a name=\"hpo-HP.580030365\"> </a></td><td>Vaginal birth after Caesarian</td></tr><tr><td style=\"white-space:nowrap\">HP:0011412<a name=\"hpo-HP.580011412\"> </a></td><td>Ventouse delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0002572<a name=\"hpo-HP.580002572\"> </a></td><td>Episodic vomiting</td></tr><tr><td style=\"white-space:nowrap\">HP:0030350<a name=\"hpo-HP.580030350\"> </a></td><td>Erythematous papule</td></tr><tr><td style=\"white-space:nowrap\">HP:0001386<a name=\"hpo-HP.580001386\"> </a></td><td>Joint swelling</td></tr><tr><td style=\"white-space:nowrap\">HP:0000147<a name=\"hpo-HP.580000147\"> </a></td><td>Polycystic ovaries</td></tr><tr><td style=\"white-space:nowrap\">HP:0012412<a name=\"hpo-HP.580012412\"> </a></td><td>Premature adrenarche</td></tr><tr><td style=\"white-space:nowrap\">HP:0004411<a name=\"hpo-HP.580004411\"> </a></td><td>Deviated nasal septum</td></tr><tr><td style=\"white-space:nowrap\">HP:0040183<a name=\"hpo-HP.580040183\"> </a></td><td>Encopresis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100507<a name=\"hpo-HP.580100507\"> </a></td><td>Reduced blood folate concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0007011<a name=\"hpo-HP.580007011\"> </a></td><td>Fourth cranial nerve palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000375<a name=\"hpo-HP.580000375\"> </a></td><td>Abnormal cochlea morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009911<a name=\"hpo-HP.580009911\"> </a></td><td>Abnormal temporal bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000081<a name=\"hpo-HP.580000081\"> </a></td><td>Duplicated collecting system</td></tr><tr><td style=\"white-space:nowrap\">HP:0006894<a name=\"hpo-HP.580006894\"> </a></td><td>Hypoplastic olfactory lobes</td></tr><tr><td style=\"white-space:nowrap\">HP:0011380<a name=\"hpo-HP.580011380\"> </a></td><td>Morphological abnormality of the semicircular canal</td></tr><tr><td style=\"white-space:nowrap\">HP:0000110<a name=\"hpo-HP.580000110\"> </a></td><td>Renal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030025<a name=\"hpo-HP.580030025\"> </a></td><td>Auricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0010044<a name=\"hpo-HP.580010044\"> </a></td><td>Short 4th metacarpal</td></tr><tr><td style=\"white-space:nowrap\">HP:0010047<a name=\"hpo-HP.580010047\"> </a></td><td>Short 5th metacarpal</td></tr><tr><td style=\"white-space:nowrap\">HP:0000201<a name=\"hpo-HP.580000201\"> </a></td><td>Pierre-Robin sequence</td></tr><tr><td style=\"white-space:nowrap\">HP:0100837<a name=\"hpo-HP.580100837\"> </a></td><td>Atrophodermia vermiculata</td></tr><tr><td style=\"white-space:nowrap\">HP:0002673<a name=\"hpo-HP.580002673\"> </a></td><td>Coxa valga</td></tr><tr><td style=\"white-space:nowrap\">HP:0001476<a name=\"hpo-HP.580001476\"> </a></td><td>Delayed closure of the anterior fontanelle</td></tr><tr><td style=\"white-space:nowrap\">HP:0011069<a name=\"hpo-HP.580011069\"> </a></td><td>Increased number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009879<a name=\"hpo-HP.580009879\"> </a></td><td>Simplified gyral pattern</td></tr><tr><td style=\"white-space:nowrap\">HP:0006315<a name=\"hpo-HP.580006315\"> </a></td><td>Single median maxillary incisor</td></tr><tr><td style=\"white-space:nowrap\">HP:0001194<a name=\"hpo-HP.580001194\"> </a></td><td>Abnormalities of placenta or umbilical cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0100767<a name=\"hpo-HP.580100767\"> </a></td><td>Abnormal placenta morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0006543<a name=\"hpo-HP.580006543\"> </a></td><td>Cardiorespiratory arrest</td></tr><tr><td style=\"white-space:nowrap\">HP:0003074<a name=\"hpo-HP.580003074\"> </a></td><td>Hyperglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000842<a name=\"hpo-HP.580000842\"> </a></td><td>Hyperinsulinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011951<a name=\"hpo-HP.580011951\"> </a></td><td>Aspiration pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006528<a name=\"hpo-HP.580006528\"> </a></td><td>Chronic lung disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0002383<a name=\"hpo-HP.580002383\"> </a></td><td>Encephalitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000388<a name=\"hpo-HP.580000388\"> </a></td><td>Otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0002530<a name=\"hpo-HP.580002530\"> </a></td><td>Axial dystonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002780<a name=\"hpo-HP.580002780\"> </a></td><td>Bronchomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008755<a name=\"hpo-HP.580008755\"> </a></td><td>Laryngotracheomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000308<a name=\"hpo-HP.580000308\"> </a></td><td>Microretrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002786<a name=\"hpo-HP.580002786\"> </a></td><td>Tracheobronchomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012389<a name=\"hpo-HP.580012389\"> </a></td><td>Appendicular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011323<a name=\"hpo-HP.580011323\"> </a></td><td>Cleft of chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000417<a name=\"hpo-HP.580000417\"> </a></td><td>Slender nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0001863<a name=\"hpo-HP.580001863\"> </a></td><td>Toe clinodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0008386<a name=\"hpo-HP.580008386\"> </a></td><td>Aplasia/Hypoplasia of the nails</td></tr><tr><td style=\"white-space:nowrap\">HP:0006989<a name=\"hpo-HP.580006989\"> </a></td><td>Dysplastic corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0100954<a name=\"hpo-HP.580100954\"> </a></td><td>Open operculum</td></tr><tr><td style=\"white-space:nowrap\">HP:0004482<a name=\"hpo-HP.580004482\"> </a></td><td>Relative macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:3000033<a name=\"hpo-HP.583000033\"> </a></td><td>Abnormal nasopharyngeal adenoid morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009062<a name=\"hpo-HP.580009062\"> </a></td><td>Infantile axial hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002189<a name=\"hpo-HP.580002189\"> </a></td><td>obsolete Excessive daytime sleepiness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002141<a name=\"hpo-HP.580002141\"> </a></td><td>Gait imbalance</td></tr><tr><td style=\"white-space:nowrap\">HP:0012734<a name=\"hpo-HP.580012734\"> </a></td><td>Ketotic hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005968<a name=\"hpo-HP.580005968\"> </a></td><td>Temperature instability</td></tr><tr><td style=\"white-space:nowrap\">HP:0012538<a name=\"hpo-HP.580012538\"> </a></td><td>Gluten intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0000979<a name=\"hpo-HP.580000979\"> </a></td><td>Purpura</td></tr><tr><td style=\"white-space:nowrap\">HP:0001988<a name=\"hpo-HP.580001988\"> </a></td><td>Recurrent hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001488<a name=\"hpo-HP.580001488\"> </a></td><td>Bilateral ptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011229<a name=\"hpo-HP.580011229\"> </a></td><td>Broad eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0004440<a name=\"hpo-HP.580004440\"> </a></td><td>Coronal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004453<a name=\"hpo-HP.580004453\"> </a></td><td>Overfolding of the superior helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0012547<a name=\"hpo-HP.580012547\"> </a></td><td>Abnormal involuntary eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0100814<a name=\"hpo-HP.580100814\"> </a></td><td>Blue nevus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010751<a name=\"hpo-HP.580010751\"> </a></td><td>Dimple chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0007087<a name=\"hpo-HP.580007087\"> </a></td><td>obsolete Involuntary jerking movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0012498<a name=\"hpo-HP.580012498\"> </a></td><td>Nuchal cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0002472<a name=\"hpo-HP.580002472\"> </a></td><td>Small cerebral cortex</td></tr><tr><td style=\"white-space:nowrap\">HP:0100307<a name=\"hpo-HP.580100307\"> </a></td><td>Cerebellar hemisphere hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002151<a name=\"hpo-HP.580002151\"> </a></td><td>Increased serum lactate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001698<a name=\"hpo-HP.580001698\"> </a></td><td>Pericardial effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0006903<a name=\"hpo-HP.580006903\"> </a></td><td>Congenital peripheral neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006895<a name=\"hpo-HP.580006895\"> </a></td><td>Lower limb hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002744<a name=\"hpo-HP.580002744\"> </a></td><td>Bilateral cleft lip and palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0010664<a name=\"hpo-HP.580010664\"> </a></td><td>Fusion of the left and right thalami</td></tr><tr><td style=\"white-space:nowrap\">HP:0000327<a name=\"hpo-HP.580000327\"> </a></td><td>Hypoplasia of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0000474<a name=\"hpo-HP.580000474\"> </a></td><td>Thickened nuchal skin fold</td></tr><tr><td style=\"white-space:nowrap\">HP:0000105<a name=\"hpo-HP.580000105\"> </a></td><td>Enlarged kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0000113<a name=\"hpo-HP.580000113\"> </a></td><td>Polycystic kidney dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000104<a name=\"hpo-HP.580000104\"> </a></td><td>Renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001362<a name=\"hpo-HP.580001362\"> </a></td><td>Calvarial skull defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0008245<a name=\"hpo-HP.580008245\"> </a></td><td>Pituitary hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001552<a name=\"hpo-HP.580001552\"> </a></td><td>Barrel-shaped chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0006297<a name=\"hpo-HP.580006297\"> </a></td><td>Hypoplasia of dental enamel</td></tr><tr><td style=\"white-space:nowrap\">HP:0100023<a name=\"hpo-HP.580100023\"> </a></td><td>Recurrent hand flapping</td></tr><tr><td style=\"white-space:nowrap\">HP:0005518<a name=\"hpo-HP.580005518\"> </a></td><td>Increased mean corpuscular volume</td></tr><tr><td style=\"white-space:nowrap\">HP:0012418<a name=\"hpo-HP.580012418\"> </a></td><td>Hypoxemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100259<a name=\"hpo-HP.580100259\"> </a></td><td>Postaxial polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010814<a name=\"hpo-HP.580010814\"> </a></td><td>Abnormal position of hair whorl</td></tr><tr><td style=\"white-space:nowrap\">HP:0003764<a name=\"hpo-HP.580003764\"> </a></td><td>Nevus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000445<a name=\"hpo-HP.580000445\"> </a></td><td>Wide nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0010677<a name=\"hpo-HP.580010677\"> </a></td><td>Enuresis nocturna</td></tr><tr><td style=\"white-space:nowrap\">HP:0001510<a name=\"hpo-HP.580001510\"> </a></td><td>Growth delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0012428<a name=\"hpo-HP.580012428\"> </a></td><td>Prominent calcaneus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012471<a name=\"hpo-HP.580012471\"> </a></td><td>Thick vermilion border</td></tr><tr><td style=\"white-space:nowrap\">HP:0007110<a name=\"hpo-HP.580007110\"> </a></td><td>Central hypoventilation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010614<a name=\"hpo-HP.580010614\"> </a></td><td>Fibroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001034<a name=\"hpo-HP.580001034\"> </a></td><td>Hypermelanotic macule</td></tr><tr><td style=\"white-space:nowrap\">HP:0011365<a name=\"hpo-HP.580011365\"> </a></td><td>Patchy hypopigmentation of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0001920<a name=\"hpo-HP.580001920\"> </a></td><td>Renal artery stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002828<a name=\"hpo-HP.580002828\"> </a></td><td>Multiple joint contractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0002144<a name=\"hpo-HP.580002144\"> </a></td><td>Tethered cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0010964<a name=\"hpo-HP.580010964\"> </a></td><td>Abnormal circulating long-chain fatty-acid concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0010536<a name=\"hpo-HP.580010536\"> </a></td><td>Central sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0011262<a name=\"hpo-HP.580011262\"> </a></td><td>Crimped helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0040079<a name=\"hpo-HP.580040079\"> </a></td><td>Irregular dentition</td></tr><tr><td style=\"white-space:nowrap\">HP:0011481<a name=\"hpo-HP.580011481\"> </a></td><td>Abnormal lacrimal duct morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000220<a name=\"hpo-HP.580000220\"> </a></td><td>Velopharyngeal insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002153<a name=\"hpo-HP.580002153\"> </a></td><td>Hyperkalemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002148<a name=\"hpo-HP.580002148\"> </a></td><td>Hypophosphatemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012621<a name=\"hpo-HP.580012621\"> </a></td><td>Persistent cloaca</td></tr><tr><td style=\"white-space:nowrap\">HP:0000867<a name=\"hpo-HP.580000867\"> </a></td><td>Secondary hyperparathyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0003762<a name=\"hpo-HP.580003762\"> </a></td><td>Uterus didelphys</td></tr><tr><td style=\"white-space:nowrap\">HP:0100512<a name=\"hpo-HP.580100512\"> </a></td><td>Low levels of vitamin D</td></tr><tr><td style=\"white-space:nowrap\">HP:0012156<a name=\"hpo-HP.580012156\"> </a></td><td>Hemophagocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008209<a name=\"hpo-HP.580008209\"> </a></td><td>Premature ovarian insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0004349<a name=\"hpo-HP.580004349\"> </a></td><td>Reduced bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0001924<a name=\"hpo-HP.580001924\"> </a></td><td>Sideroblastic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011703<a name=\"hpo-HP.580011703\"> </a></td><td>Sinus tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010609<a name=\"hpo-HP.580010609\"> </a></td><td>Skin tags</td></tr><tr><td style=\"white-space:nowrap\">HP:0002725<a name=\"hpo-HP.580002725\"> </a></td><td>Systemic lupus erythematosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0003193<a name=\"hpo-HP.580003193\"> </a></td><td>Allergic rhinitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006896<a name=\"hpo-HP.580006896\"> </a></td><td>Hypnopompic hallucinations</td></tr><tr><td style=\"white-space:nowrap\">HP:0002524<a name=\"hpo-HP.580002524\"> </a></td><td>Cataplexy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005227<a name=\"hpo-HP.580005227\"> </a></td><td>Adenomatous colonic polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012173<a name=\"hpo-HP.580012173\"> </a></td><td>Orthostatic tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001271<a name=\"hpo-HP.580001271\"> </a></td><td>Polyneuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0009120<a name=\"hpo-HP.580009120\"> </a></td><td>Aplasia/Hypoplasia involving the sinuses</td></tr><tr><td style=\"white-space:nowrap\">HP:0000625<a name=\"hpo-HP.580000625\"> </a></td><td>Eyelid coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0009754<a name=\"hpo-HP.580009754\"> </a></td><td>Fibrous syngnathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012478<a name=\"hpo-HP.580012478\"> </a></td><td>Temporomandibular joint ankylosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001233<a name=\"hpo-HP.580001233\"> </a></td><td>2-3 finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000811<a name=\"hpo-HP.580000811\"> </a></td><td>Abnormal external genitalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005120<a name=\"hpo-HP.580005120\"> </a></td><td>Abnormal cardiac atrium morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008388<a name=\"hpo-HP.580008388\"> </a></td><td>Abnormal toenail morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011467<a name=\"hpo-HP.580011467\"> </a></td><td>Absent gallbladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0010760<a name=\"hpo-HP.580010760\"> </a></td><td>Absent toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001545<a name=\"hpo-HP.580001545\"> </a></td><td>Anteriorly placed anus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001640<a name=\"hpo-HP.580001640\"> </a></td><td>Cardiomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002990<a name=\"hpo-HP.580002990\"> </a></td><td>Fibular aplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004443<a name=\"hpo-HP.580004443\"> </a></td><td>Lambdoidal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008569<a name=\"hpo-HP.580008569\"> </a></td><td>Microtia, second degree</td></tr><tr><td style=\"white-space:nowrap\">HP:0006277<a name=\"hpo-HP.580006277\"> </a></td><td>Pancreatic hyperplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010445<a name=\"hpo-HP.580010445\"> </a></td><td>Primum atrial septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0011640<a name=\"hpo-HP.580011640\"> </a></td><td>Single coronary artery origin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011608<a name=\"hpo-HP.580011608\"> </a></td><td>Type II truncus arteriosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0011327<a name=\"hpo-HP.580011327\"> </a></td><td>Posterior plagiocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0007655<a name=\"hpo-HP.580007655\"> </a></td><td>Eversion of lateral third of lower eyelids</td></tr><tr><td style=\"white-space:nowrap\">HP:0010747<a name=\"hpo-HP.580010747\"> </a></td><td>Medial flaring of the eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0005957<a name=\"hpo-HP.580005957\"> </a></td><td>Breathing dysregulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000992<a name=\"hpo-HP.580000992\"> </a></td><td>Cutaneous photosensitivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0011995<a name=\"hpo-HP.580011995\"> </a></td><td>Atrial septal dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000377<a name=\"hpo-HP.580000377\"> </a></td><td>Abnormality of the pinna</td></tr><tr><td style=\"white-space:nowrap\">HP:0011266<a name=\"hpo-HP.580011266\"> </a></td><td>Microtia, first degree</td></tr><tr><td style=\"white-space:nowrap\">HP:0012650<a name=\"hpo-HP.580012650\"> </a></td><td>Perisylvian polymicrogyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0004970<a name=\"hpo-HP.580004970\"> </a></td><td>Ascending tubular aorta aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0008348<a name=\"hpo-HP.580008348\"> </a></td><td>Decreased circulating IgG2 level</td></tr><tr><td style=\"white-space:nowrap\">HP:0012115<a name=\"hpo-HP.580012115\"> </a></td><td>Hepatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006979<a name=\"hpo-HP.580006979\"> </a></td><td>Sleep-wake cycle disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0008587<a name=\"hpo-HP.580008587\"> </a></td><td>Mild neurosensory hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0006097<a name=\"hpo-HP.580006097\"> </a></td><td>3-4 finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005263<a name=\"hpo-HP.580005263\"> </a></td><td>Gastritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0200043<a name=\"hpo-HP.580200043\"> </a></td><td>Verrucae</td></tr><tr><td style=\"white-space:nowrap\">HP:0009600<a name=\"hpo-HP.580009600\"> </a></td><td>Flexion contracture of thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0010818<a name=\"hpo-HP.580010818\"> </a></td><td>Generalized tonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0002599<a name=\"hpo-HP.580002599\"> </a></td><td>Head titubation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002090<a name=\"hpo-HP.580002090\"> </a></td><td>Pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030423<a name=\"hpo-HP.580030423\"> </a></td><td>Splenic cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0030187<a name=\"hpo-HP.580030187\"> </a></td><td>Titubation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002375<a name=\"hpo-HP.580002375\"> </a></td><td>Hypokinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007166<a name=\"hpo-HP.580007166\"> </a></td><td>Paroxysmal dyskinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003077<a name=\"hpo-HP.580003077\"> </a></td><td>Hyperlipidemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000017<a name=\"hpo-HP.580000017\"> </a></td><td>Nocturia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100555<a name=\"hpo-HP.580100555\"> </a></td><td>Asymmetric growth</td></tr><tr><td style=\"white-space:nowrap\">HP:0011847<a name=\"hpo-HP.580011847\"> </a></td><td>Giant cell tumor of bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0000112<a name=\"hpo-HP.580000112\"> </a></td><td>Nephropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000246<a name=\"hpo-HP.580000246\"> </a></td><td>Sinusitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001012<a name=\"hpo-HP.580001012\"> </a></td><td>Multiple lipomas</td></tr><tr><td style=\"white-space:nowrap\">HP:0000851<a name=\"hpo-HP.580000851\"> </a></td><td>Congenital hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0002345<a name=\"hpo-HP.580002345\"> </a></td><td>Action tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002677<a name=\"hpo-HP.580002677\"> </a></td><td>Small foramen magnum</td></tr><tr><td style=\"white-space:nowrap\">HP:0011947<a name=\"hpo-HP.580011947\"> </a></td><td>Respiratory tract infection</td></tr><tr><td style=\"white-space:nowrap\">HP:0012151<a name=\"hpo-HP.580012151\"> </a></td><td>Hemothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0005988<a name=\"hpo-HP.580005988\"> </a></td><td>Congenital muscular torticollis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002329<a name=\"hpo-HP.580002329\"> </a></td><td>Drowsiness</td></tr><tr><td style=\"white-space:nowrap\">HP:0012395<a name=\"hpo-HP.580012395\"> </a></td><td>Seasonal allergy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011679<a name=\"hpo-HP.580011679\"> </a></td><td>Tetralogy of Fallot with pulmonary stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001864<a name=\"hpo-HP.580001864\"> </a></td><td>Clinodactyly of the 5th toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0006934<a name=\"hpo-HP.580006934\"> </a></td><td>Congenital nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0100355<a name=\"hpo-HP.580100355\"> </a></td><td>Contractures of the distal interphalangeal joint of the 5th toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0007894<a name=\"hpo-HP.580007894\"> </a></td><td>Hypopigmentation of the fundus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012377<a name=\"hpo-HP.580012377\"> </a></td><td>Hemianopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002354<a name=\"hpo-HP.580002354\"> </a></td><td>Memory impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000872<a name=\"hpo-HP.580000872\"> </a></td><td>Hashimoto thyroiditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002519<a name=\"hpo-HP.580002519\"> </a></td><td>Hypnagogic hallucinations</td></tr><tr><td style=\"white-space:nowrap\">HP:0010647<a name=\"hpo-HP.580010647\"> </a></td><td>Abnormal elasticity of skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0002592<a name=\"hpo-HP.580002592\"> </a></td><td>Gastric ulcer</td></tr><tr><td style=\"white-space:nowrap\">HP:0004938<a name=\"hpo-HP.580004938\"> </a></td><td>Tortuous cerebral arteries</td></tr><tr><td style=\"white-space:nowrap\">HP:0004948<a name=\"hpo-HP.580004948\"> </a></td><td>Vascular tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002516<a name=\"hpo-HP.580002516\"> </a></td><td>Increased intracranial pressure</td></tr><tr><td style=\"white-space:nowrap\">HP:0006460<a name=\"hpo-HP.580006460\"> </a></td><td>Increased laxity of ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0002317<a name=\"hpo-HP.580002317\"> </a></td><td>Unsteady gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0000182<a name=\"hpo-HP.580000182\"> </a></td><td>Movement abnormality of the tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0009887<a name=\"hpo-HP.580009887\"> </a></td><td>Abnormality of hair pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005824<a name=\"hpo-HP.580005824\"> </a></td><td>Clinodactyly of the 2nd toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002212<a name=\"hpo-HP.580002212\"> </a></td><td>Curly hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0009803<a name=\"hpo-HP.580009803\"> </a></td><td>Short phalanx of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0000572<a name=\"hpo-HP.580000572\"> </a></td><td>Visual loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0005216<a name=\"hpo-HP.580005216\"> </a></td><td>Impaired mastication</td></tr><tr><td style=\"white-space:nowrap\">HP:0000619<a name=\"hpo-HP.580000619\"> </a></td><td>Impaired convergence</td></tr><tr><td style=\"white-space:nowrap\">HP:0002403<a name=\"hpo-HP.580002403\"> </a></td><td>Positive Romberg sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0008744<a name=\"hpo-HP.580008744\"> </a></td><td>Abnormal aryepiglottic fold morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002374<a name=\"hpo-HP.580002374\"> </a></td><td>Diminished movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0008277<a name=\"hpo-HP.580008277\"> </a></td><td>Abnormal blood zinc concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0012781<a name=\"hpo-HP.580012781\"> </a></td><td>Mid-frequency hearing loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0100758<a name=\"hpo-HP.580100758\"> </a></td><td>Gangrene</td></tr><tr><td style=\"white-space:nowrap\">HP:0003256<a name=\"hpo-HP.580003256\"> </a></td><td>Abnormality of the coagulation cascade</td></tr><tr><td style=\"white-space:nowrap\">HP:0004387<a name=\"hpo-HP.580004387\"> </a></td><td>Enterocolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011029<a name=\"hpo-HP.580011029\"> </a></td><td>Internal hemorrhage</td></tr><tr><td style=\"white-space:nowrap\">HP:0011649<a name=\"hpo-HP.580011649\"> </a></td><td>Patent ductus arteriosus after premature birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0012050<a name=\"hpo-HP.580012050\"> </a></td><td>Anasarca</td></tr><tr><td style=\"white-space:nowrap\">HP:0001683<a name=\"hpo-HP.580001683\"> </a></td><td>Ectopia cordis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011682<a name=\"hpo-HP.580011682\"> </a></td><td>Perimembranous ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0010624<a name=\"hpo-HP.580010624\"> </a></td><td>Aplastic/hypoplastic toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002705<a name=\"hpo-HP.580002705\"> </a></td><td>High, narrow palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0011340<a name=\"hpo-HP.580011340\"> </a></td><td>Incomplete cleft of the upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0011613<a name=\"hpo-HP.580011613\"> </a></td><td>Interrupted aortic arch type B</td></tr><tr><td style=\"white-space:nowrap\">HP:0006167<a name=\"hpo-HP.580006167\"> </a></td><td>Prominent proximal interphalangeal joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0002918<a name=\"hpo-HP.580002918\"> </a></td><td>Hypermagnesemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011937<a name=\"hpo-HP.580011937\"> </a></td><td>Hypoplastic fifth toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0001067<a name=\"hpo-HP.580001067\"> </a></td><td>Neurofibromas</td></tr><tr><td style=\"white-space:nowrap\">HP:0011403<a name=\"hpo-HP.580011403\"> </a></td><td>Abnormal umbilical cord blood vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0003316<a name=\"hpo-HP.580003316\"> </a></td><td>Butterfly vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0002247<a name=\"hpo-HP.580002247\"> </a></td><td>Duodenal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008439<a name=\"hpo-HP.580008439\"> </a></td><td>Lumbar hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0011599<a name=\"hpo-HP.580011599\"> </a></td><td>Mesocardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008467<a name=\"hpo-HP.580008467\"> </a></td><td>Thoracic hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0004626<a name=\"hpo-HP.580004626\"> </a></td><td>Lumbar scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006808<a name=\"hpo-HP.580006808\"> </a></td><td>Cerebral hypomyelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0002926<a name=\"hpo-HP.580002926\"> </a></td><td>Abnormality of thyroid physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0007970<a name=\"hpo-HP.580007970\"> </a></td><td>Congenital ptosis</td></tr></table></div>"},"url":"http://purl.obolibrary.org/obo/hp.owl","version":"0.2.0","name":"HPO","title":"Human Phenotype Ontology","status":"draft","experimental":false,"date":"2022-11-28T21:07:57+00:00","publisher":"NCPI FHIR Working Group","contact":[{"name":"NCPI FHIR Working Group","telecom":[{"system":"url","value":"https://github.com/nih-ncpi"}]},{"name":"Meen Chul Kim","telecom":[{"system":"email","value":"meenchul@d3b.center","use":"work"}]}],"description":"The Human Phenotype Ontology (HPO) provides a standardized vocabulary of phenotypic abnormalities encountered in human disease. Please see license of HPO at http://www.human-phenotype-ontology.org","valueSet":"http://fhir.ncpi-project-forge.io/ValueSet/phenotype-codes","hierarchyMeaning":"is-a","compositional":false,"versionNeeded":false,"content":"fragment","count":1880,"filter":[{"code":"root","operator":["="],"value":"True or false."},{"code":"deprecated","operator":["="],"value":"True or false."},{"code":"imported","operator":["="],"value":"True or false"}],"property":[{"code":"parent","description":"Parent codes.","type":"code"},{"code":"imported","description":"Indicates if the concept is imported from another code system.","type":"boolean"},{"code":"root","description":"Indicates if this concept is a root concept (i.e. Thing is equivalent or a direct parent)","type":"boolean"},{"code":"deprecated","description":"Indicates if this concept is deprecated.","type":"boolean"}],"concept":[{"code":"HP:0000365","display":"Hearing impairment"},{"code":"HP:0002564","display":"obsolete Malformation of the heart and great vessels"},{"code":"HP:0001028","display":"Hemangioma"},{"code":"HP:0000476","display":"Cystic hygroma"},{"code":"HP:0000568","display":"Microphthalmia"},{"code":"HP:0000518","display":"Cataract"},{"code":"HP:0000612","display":"Iris coloboma"},{"code":"HP:0000567","display":"Chorioretinal coloboma"},{"code":"HP:0000316","display":"Hypertelorism"},{"code":"HP:0000482","display":"Microcornea"},{"code":"HP:0000588","display":"Optic nerve coloboma"},{"code":"HP:0004426","display":"Abnormality of the cheek"},{"code":"HP:0009125","display":"Lipodystrophy"},{"code":"HP:0002023","display":"Anal atresia"},{"code":"HP:0003468","display":"Abnormal vertebral morphology"},{"code":"HP:0000545","display":"Myopia"},{"code":"HP:0000122","display":"Unilateral renal agenesis"},{"code":"HP:0002143","display":"Abnormality of the spinal cord"},{"code":"HP:0003508","display":"Proportionate short stature"},{"code":"HP:0000271","display":"Abnormality of the face"},{"code":"HP:0000637","display":"Long palpebral fissure"},{"code":"HP:0000492","display":"Abnormal eyelid morphology"},{"code":"HP:0000389","display":"Chronic otitis media"},{"code":"HP:0000400","display":"Macrotia"},{"code":"HP:0000405","display":"Conductive hearing impairment"},{"code":"HP:0012712","display":"Mild hearing impairment"},{"code":"HP:0005280","display":"Depressed nasal bridge"},{"code":"HP:0000431","display":"Wide nasal bridge"},{"code":"HP:0000319","display":"Smooth philtrum"},{"code":"HP:0000175","display":"Cleft palate"},{"code":"HP:0001611","display":"Nasal speech"},{"code":"HP:0002099","display":"Asthma"},{"code":"HP:0001397","display":"Hepatic steatosis"},{"code":"HP:0001081","display":"Cholelithiasis"},{"code":"HP:0002650","display":"Scoliosis"},{"code":"HP:0001212","display":"Prominent fingertip pads"},{"code":"HP:0001328","display":"Specific learning disability"},{"code":"HP:0000824","display":"Growth hormone deficiency"},{"code":"HP:0002607","display":"Bowel incontinence"},{"code":"HP:0100731","display":"Transverse facial cleft"},{"code":"HP:0000528","display":"Anophthalmia"},{"code":"HP:0000601","display":"Hypotelorism"},{"code":"HP:0000369","display":"Low-set ears"},{"code":"HP:0001274","display":"Agenesis of corpus callosum"},{"code":"HP:0002084","display":"Encephalocele"},{"code":"HP:0007033","display":"Cerebellar dysplasia"},{"code":"HP:0100336","display":"Bilateral cleft lip"},{"code":"HP:0100337","display":"Bilateral cleft palate"},{"code":"HP:0001511","display":"Intrauterine growth retardation"},{"code":"HP:0011451","display":"Congenital microcephaly"},{"code":"HP:0000324","display":"Facial asymmetry"},{"code":"HP:0000581","display":"Blepharophimosis"},{"code":"HP:0000508","display":"Ptosis"},{"code":"HP:0008551","display":"Microtia"},{"code":"HP:0001631","display":"Atrial septal defect"},{"code":"HP:0000085","display":"Horseshoe kidney"},{"code":"HP:0011927","display":"Short digit"},{"code":"HP:0001156","display":"Brachydactyly"},{"code":"HP:0002066","display":"Gait ataxia"},{"code":"HP:0001250","display":"Seizure"},{"code":"HP:0001263","display":"Global developmental delay"},{"code":"HP:0001562","display":"Oligohydramnios"},{"code":"HP:0001195","display":"Single umbilical artery"},{"code":"HP:0006349","display":"Agenesis of permanent teeth"},{"code":"HP:0000668","display":"Hypodontia"},{"code":"HP:0000677","display":"Oligodontia"},{"code":"HP:0001252","display":"Muscular hypotonia"},{"code":"HP:0003429","display":"CNS hypomyelination"},{"code":"HP:0010864","display":"Intellectual disability, severe"},{"code":"HP:0004325","display":"Decreased body weight"},{"code":"HP:0000666","display":"Horizontal nystagmus"},{"code":"HP:0000218","display":"High palate"},{"code":"HP:0010809","display":"Broad uvula"},{"code":"HP:0000767","display":"Pectus excavatum"},{"code":"HP:0003691","display":"Scapular winging"},{"code":"HP:0002616","display":"Aortic root aneurysm"},{"code":"HP:0001601","display":"Laryngomalacia"},{"code":"HP:0002021","display":"Pyloric stenosis"},{"code":"HP:0001388","display":"Joint laxity"},{"code":"HP:0001187","display":"Hyperextensibility of the finger joints"},{"code":"HP:0000741","display":"Apathy"},{"code":"HP:0000817","display":"Poor eye contact"},{"code":"HP:0000821","display":"Hypothyroidism"},{"code":"HP:0000002","display":"Abnormality of body height"},{"code":"HP:0000079","display":"Abnormality of the urinary system"},{"code":"HP:0000164","display":"Abnormality of the dentition"},{"code":"HP:0000364","display":"Hearing abnormality"},{"code":"HP:0000366","display":"Abnormality of the nose"},{"code":"HP:0000464","display":"Abnormality of the neck"},{"code":"HP:0000707","display":"Abnormality of the nervous system"},{"code":"HP:0000708","display":"Behavioral abnormality"},{"code":"HP:0000769","display":"Abnormality of the breast"},{"code":"HP:0000772","display":"Abnormality of the ribs"},{"code":"HP:0000775","display":"Abnormality of the diaphragm"},{"code":"HP:0000889","display":"Abnormality of the clavicle"},{"code":"HP:0000925","display":"Abnormality of the vertebral column"},{"code":"HP:0001080","display":"Biliary tract abnormality"},{"code":"HP:0001392","display":"Abnormality of the liver"},{"code":"HP:0001438","display":"Abnormal abdomen morphology"},{"code":"HP:0001608","display":"Abnormality of the voice"},{"code":"HP:0001627","display":"Abnormal heart morphology"},{"code":"HP:0001732","display":"Abnormality of the pancreas"},{"code":"HP:0001739","display":"Abnormality of the nasopharynx"},{"code":"HP:0001743","display":"Abnormality of the spleen"},{"code":"HP:0001760","display":"Abnormal foot morphology"},{"code":"HP:0001871","display":"Abnormality of blood and blood-forming tissues"},{"code":"HP:0002031","display":"Abnormal esophagus morphology"},{"code":"HP:0002244","display":"Abnormality of the small intestine"},{"code":"HP:0002246","display":"Abnormality of the duodenum"},{"code":"HP:0002250","display":"Abnormal large intestine morphology"},{"code":"HP:0002644","display":"Abnormality of pelvic girdle bone morphology"},{"code":"HP:0002664","display":"Neoplasm"},{"code":"HP:0002715","display":"Abnormality of the immune system"},{"code":"HP:0002814","display":"Abnormality of the lower limb"},{"code":"HP:0002817","display":"Abnormality of the upper limb"},{"code":"HP:0005483","display":"Abnormal epiglottis morphology"},{"code":"HP:0008777","display":"Abnormal vocal cord morphology"},{"code":"HP:0011844","display":"Abnormal appendicular skeleton morphology"},{"code":"HP:0012732","display":"Anorectal anomaly"},{"code":"HP:0001508","display":"Failure to thrive"},{"code":"HP:0002902","display":"Hyponatremia"},{"code":"HP:0012236","display":"Elevated sweat chloride"},{"code":"HP:0000347","display":"Micrognathia"},{"code":"HP:0000926","display":"Platyspondyly"},{"code":"HP:0001371","display":"Flexion contracture"},{"code":"HP:0001875","display":"Neutropenia"},{"code":"HP:0001888","display":"Lymphopenia"},{"code":"HP:0002857","display":"Genu valgum"},{"code":"HP:0002986","display":"Radial bowing"},{"code":"HP:0003015","display":"Flared metaphysis"},{"code":"HP:0003025","display":"Metaphyseal irregularity"},{"code":"HP:0003097","display":"Short femur"},{"code":"HP:0003300","display":"Ovoid vertebral bodies"},{"code":"HP:0003307","display":"Hyperlordosis"},{"code":"HP:0004209","display":"Clinodactyly of the 5th finger"},{"code":"HP:0004322","display":"Short stature"},{"code":"HP:0005792","display":"Short humerus"},{"code":"HP:0006248","display":"Limited wrist movement"},{"code":"HP:0000944","display":"Abnormality of the metaphysis"},{"code":"HP:0011921","display":"Exudative pleural effusion"},{"code":"HP:0003043","display":"Abnormality of the shoulder"},{"code":"HP:0000290","display":"Abnormality of the forehead"},{"code":"HP:0005288","display":"Abnormality of the nares"},{"code":"HP:0000234","display":"Abnormality of the head"},{"code":"HP:0004323","display":"Abnormality of body weight"},{"code":"HP:0000483","display":"Astigmatism"},{"code":"HP:0011003","display":"High myopia"},{"code":"HP:0000470","display":"Short neck"},{"code":"HP:0030044","display":"Flexion contracture of digit"},{"code":"HP:0100871","display":"Abnormality of the palm"},{"code":"HP:0004334","display":"Dermal atrophy"},{"code":"HP:0001845","display":"Overlapping toe"},{"code":"HP:0000496","display":"Abnormality of eye movement"},{"code":"HP:0001780","display":"Abnormality of toe"},{"code":"HP:0001626","display":"Abnormality of the cardiovascular system"},{"code":"HP:0002086","display":"Abnormality of the respiratory system"},{"code":"HP:0000818","display":"Abnormality of the endocrine system"},{"code":"HP:0012372","display":"Abnormal eye 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impairment"},{"code":"HP:0001370","display":"Rheumatoid arthritis"},{"code":"HP:0000016","display":"Urinary retention"},{"code":"HP:0012537","display":"Food intolerance"},{"code":"HP:0011297","display":"Abnormal digit morphology"},{"code":"HP:0001273","display":"Abnormal corpus callosum morphology"},{"code":"HP:0030148","display":"Heart murmur"},{"code":"HP:0045018","display":"Partial duplication of eyebrows"},{"code":"HP:0008998","display":"Pectoralis hypoplasia"},{"code":"HP:0001707","display":"Abnormal right ventricle morphology"},{"code":"HP:0001540","display":"Diastasis recti"},{"code":"HP:0100693","display":"Iridodonesis"},{"code":"HP:0002265","display":"Large fleshy ears"},{"code":"HP:0001132","display":"Lens subluxation"},{"code":"HP:0004927","display":"Pulmonary artery dilatation"},{"code":"HP:0005619","display":"Thoracolumbar kyphosis"},{"code":"HP:0008619","display":"Bilateral sensorineural hearing impairment"},{"code":"HP:0001045","display":"Vitiligo"},{"code":"HP:0009124","display":"Abnormal adipose tissue morphology"},{"code":"HP:0002979","display":"Bowing of the legs"},{"code":"HP:0000455","display":"Broad nasal tip"},{"code":"HP:0001007","display":"Hirsutism"},{"code":"HP:0010314","display":"Premature thelarche"},{"code":"HP:0000075","display":"Renal duplication"},{"code":"HP:0000368","display":"Low-set, posteriorly rotated ears"},{"code":"HP:0001052","display":"Nevus flammeus"},{"code":"HP:0200048","display":"Cyanotic episode"},{"code":"HP:0001902","display":"Giant platelets"},{"code":"HP:0030043","display":"Hip subluxation"},{"code":"HP:0002938","display":"Lumbar hyperlordosis"},{"code":"HP:0030084","display":"Clinodactyly"},{"code":"HP:0005560","display":"Imbalanced hemoglobin synthesis"},{"code":"HP:0001539","display":"Omphalocele"},{"code":"HP:0009778","display":"Short thumb"},{"code":"HP:0002277","display":"Horner syndrome"},{"code":"HP:0011701","display":"Multifocal atrial tachycardia"},{"code":"HP:0005274","display":"Prominent nasal tip"},{"code":"HP:0001262","display":"Excessive daytime somnolence"},{"code":"HP:0001285","display":"Spastic tetraparesis"},{"code":"HP:0012171","display":"Stereotypical hand wringing"},{"code":"HP:0002518","display":"Abnormality of the periventricular white matter"},{"code":"HP:0005692","display":"Joint hyperflexibility"},{"code":"HP:0007440","display":"Generalized hyperpigmentation"},{"code":"HP:0001805","display":"Onychogryposis"},{"code":"HP:0011945","display":"Bronchiolitis obliterans organizing pneumonia"},{"code":"HP:0003763","display":"Bruxism"},{"code":"HP:0010500","display":"Hyperextensibility of the knee"},{"code":"HP:0040115","display":"Abnormality of the Eustachian tube"},{"code":"HP:0008751","display":"Laryngeal cleft"},{"code":"HP:0000403","display":"Recurrent otitis media"},{"code":"HP:0001787","display":"Abnormal delivery"},{"code":"HP:0002571","display":"Achalasia"},{"code":"HP:0002615","display":"Hypotension"},{"code":"HP:0003550","display":"Predominantly lower limb lymphedema"},{"code":"HP:0030363","display":"Primary Caesarian section"},{"code":"HP:0001727","display":"Thromboembolic stroke"},{"code":"HP:0100603","display":"Toxemia of pregnancy"},{"code":"HP:0010836","display":"Abnormal circulating copper concentration"},{"code":"HP:0000356","display":"Abnormality of the outer ear"},{"code":"HP:0002197","display":"Generalized-onset seizure"},{"code":"HP:0011436","display":"Abnormal maternal serum screening"},{"code":"HP:0003517","display":"Birth length greater than 97th percentile"},{"code":"HP:0003561","display":"Birth length less than 3rd percentile"},{"code":"HP:0012188","display":"Hyperemesis gravidarum"},{"code":"HP:0010519","display":"Increased fetal movement"},{"code":"HP:0030244","display":"Maternal fever in pregnancy"},{"code":"HP:0008071","display":"Maternal hypertension"},{"code":"HP:0100622","display":"Maternal seizure"},{"code":"HP:0011438","display":"Maternal teratogenic exposure"},{"code":"HP:0001998","display":"Neonatal hypoglycemia"},{"code":"HP:0040187","display":"Neonatal sepsis"},{"code":"HP:0002033","display":"Poor suck"},{"code":"HP:0006579","display":"Prolonged neonatal jaundice"},{"code":"HP:0001724","display":"obsolete Aortic dilatation"},{"code":"HP:0010621","display":"Cutaneous syndactyly of toes"},{"code":"HP:0001880","display":"Eosinophilia"},{"code":"HP:0000162","display":"Glossoptosis"},{"code":"HP:0100578","display":"Lipoatrophy"},{"code":"HP:0002562","display":"Low-set nipples"},{"code":"HP:0012893","display":"Neck muscle hypertrophy"},{"code":"HP:0001027","display":"Soft, doughy skin"},{"code":"HP:0100738","display":"Abnormal eating behavior"},{"code":"HP:0007328","display":"Impaired pain sensation"},{"code":"HP:0002878","display":"Respiratory failure"},{"code":"HP:0001776","display":"Bilateral talipes equinovarus"},{"code":"HP:0001360","display":"Holoprosencephaly"},{"code":"HP:0001973","display":"Autoimmune thrombocytopenia"},{"code":"HP:0100749","display":"Chest pain"},{"code":"HP:0012531","display":"Pain"},{"code":"HP:0007585","display":"Skin fragility with non-scarring blistering"},{"code":"HP:0002108","display":"Spontaneous pneumothorax"},{"code":"HP:0006562","display":"Viral hepatitis"},{"code":"HP:0012647","display":"Abnormal inflammatory response"},{"code":"HP:0012088","display":"Abnormal urinary odor"},{"code":"HP:0011458","display":"Abdominal symptom"},{"code":"HP:0002829","display":"Arthralgia"},{"code":"HP:0010783","display":"Erythema"},{"code":"HP:0010307","display":"Stridor"},{"code":"HP:0001269","display":"Hemiparesis"},{"code":"HP:0006532","display":"Recurrent pneumonia"},{"code":"HP:0002580","display":"Volvulus"},{"code":"HP:0012387","display":"Bronchitis"},{"code":"HP:0001266","display":"Choreoathetosis"},{"code":"HP:0001531","display":"Failure to thrive in infancy"},{"code":"HP:0011470","display":"Nasogastric tube feeding in infancy"},{"code":"HP:0001361","display":"Nystagmus-induced head nodding"},{"code":"HP:0001997","display":"Gout"},{"code":"HP:0000965","display":"Cutis marmorata"},{"code":"HP:0010316","display":"Ebstein anomaly of the tricuspid valve"},{"code":"HP:0010543","display":"Opsoclonus"},{"code":"HP:0007704","display":"Paroxysmal involuntary eye movements"},{"code":"HP:0030364","display":"Secondary Caesarian section"},{"code":"HP:0007738","display":"Uncontrolled eye movements"},{"code":"HP:0030366","display":"Delivery by Odon device"},{"code":"HP:0011411","display":"Forceps delivery"},{"code":"HP:0030369","display":"Induced vaginal delivery"},{"code":"HP:0005268","display":"Spontaneous abortion"},{"code":"HP:0030365","display":"Vaginal birth after Caesarian"},{"code":"HP:0011412","display":"Ventouse delivery"},{"code":"HP:0002572","display":"Episodic vomiting"},{"code":"HP:0030350","display":"Erythematous 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sequence"},{"code":"HP:0100837","display":"Atrophodermia vermiculata"},{"code":"HP:0002673","display":"Coxa valga"},{"code":"HP:0001476","display":"Delayed closure of the anterior fontanelle"},{"code":"HP:0011069","display":"Increased number of teeth"},{"code":"HP:0009879","display":"Simplified gyral pattern"},{"code":"HP:0006315","display":"Single median maxillary incisor"},{"code":"HP:0001194","display":"Abnormalities of placenta or umbilical cord"},{"code":"HP:0100767","display":"Abnormal placenta morphology"},{"code":"HP:0006543","display":"Cardiorespiratory arrest"},{"code":"HP:0003074","display":"Hyperglycemia"},{"code":"HP:0000842","display":"Hyperinsulinemia"},{"code":"HP:0011951","display":"Aspiration pneumonia"},{"code":"HP:0006528","display":"Chronic lung disease"},{"code":"HP:0002383","display":"Encephalitis"},{"code":"HP:0000388","display":"Otitis media"},{"code":"HP:0002530","display":"Axial dystonia"},{"code":"HP:0002780","display":"Bronchomalacia"},{"code":"HP:0008755","display":"Laryngotracheomalacia"},{"code":"HP:0000308","display":"Microretrognathia"},{"code":"HP:0002786","display":"Tracheobronchomalacia"},{"code":"HP:0012389","display":"Appendicular hypotonia"},{"code":"HP:0011323","display":"Cleft of chin"},{"code":"HP:0000417","display":"Slender nose"},{"code":"HP:0001863","display":"Toe clinodactyly"},{"code":"HP:0008386","display":"Aplasia/Hypoplasia of the nails"},{"code":"HP:0006989","display":"Dysplastic corpus callosum"},{"code":"HP:0100954","display":"Open operculum"},{"code":"HP:0004482","display":"Relative macrocephaly"},{"code":"HP:3000033","display":"Abnormal nasopharyngeal adenoid morphology"},{"code":"HP:0009062","display":"Infantile axial hypotonia"},{"code":"HP:0002189","display":"obsolete Excessive daytime sleepiness"},{"code":"HP:0002141","display":"Gait imbalance"},{"code":"HP:0012734","display":"Ketotic hypoglycemia"},{"code":"HP:0005968","display":"Temperature instability"},{"code":"HP:0012538","display":"Gluten intolerance"},{"code":"HP:0000979","display":"Purpura"},{"code":"HP:0001988","display":"Recurrent hypoglycemia"},{"code":"HP:0001488","display":"Bilateral ptosis"},{"code":"HP:0011229","display":"Broad eyebrow"},{"code":"HP:0004440","display":"Coronal craniosynostosis"},{"code":"HP:0004453","display":"Overfolding of the superior helices"},{"code":"HP:0012547","display":"Abnormal involuntary eye movements"},{"code":"HP:0100814","display":"Blue nevus"},{"code":"HP:0010751","display":"Dimple chin"},{"code":"HP:0007087","display":"obsolete Involuntary jerking movements"},{"code":"HP:0012498","display":"Nuchal cord"},{"code":"HP:0002472","display":"Small cerebral cortex"},{"code":"HP:0100307","display":"Cerebellar hemisphere hypoplasia"},{"code":"HP:0002151","display":"Increased serum lactate"},{"code":"HP:0001698","display":"Pericardial effusion"},{"code":"HP:0006903","display":"Congenital peripheral neuropathy"},{"code":"HP:0006895","display":"Lower limb hypertonia"},{"code":"HP:0002744","display":"Bilateral cleft lip and palate"},{"code":"HP:0010664","display":"Fusion of the left and right thalami"},{"code":"HP:0000327","display":"Hypoplasia of the maxilla"},{"code":"HP:0000474","display":"Thickened nuchal skin fold"},{"code":"HP:0000105","display":"Enlarged kidney"},{"code":"HP:0000113","display":"Polycystic kidney dysplasia"},{"code":"HP:0000104","display":"Renal agenesis"},{"code":"HP:0001362","display":"Calvarial skull defect"},{"code":"HP:0008245","display":"Pituitary hypothyroidism"},{"code":"HP:0001552","display":"Barrel-shaped chest"},{"code":"HP:0006297","display":"Hypoplasia of dental enamel"},{"code":"HP:0100023","display":"Recurrent hand flapping"},{"code":"HP:0005518","display":"Increased mean corpuscular volume"},{"code":"HP:0012418","display":"Hypoxemia"},{"code":"HP:0100259","display":"Postaxial polydactyly"},{"code":"HP:0010814","display":"Abnormal position of hair whorl"},{"code":"HP:0003764","display":"Nevus"},{"code":"HP:0000445","display":"Wide nose"},{"code":"HP:0010677","display":"Enuresis nocturna"},{"code":"HP:0001510","display":"Growth delay"},{"code":"HP:0012428","display":"Prominent calcaneus"},{"code":"HP:0012471","display":"Thick vermilion border"},{"code":"HP:0007110","display":"Central hypoventilation"},{"code":"HP:0010614","display":"Fibroma"},{"code":"HP:0001034","display":"Hypermelanotic macule"},{"code":"HP:0011365","display":"Patchy hypopigmentation of hair"},{"code":"HP:0001920","display":"Renal artery stenosis"},{"code":"HP:0002828","display":"Multiple joint contractures"},{"code":"HP:0002144","display":"Tethered cord"},{"code":"HP:0010964","display":"Abnormal circulating long-chain fatty-acid concentration"},{"code":"HP:0010536","display":"Central sleep apnea"},{"code":"HP:0011262","display":"Crimped helix"},{"code":"HP:0040079","display":"Irregular dentition"},{"code":"HP:0011481","display":"Abnormal lacrimal duct morphology"},{"code":"HP:0000220","display":"Velopharyngeal insufficiency"},{"code":"HP:0002153","display":"Hyperkalemia"},{"code":"HP:0002148","display":"Hypophosphatemia"},{"code":"HP:0012621","display":"Persistent cloaca"},{"code":"HP:0000867","display":"Secondary hyperparathyroidism"},{"code":"HP:0003762","display":"Uterus didelphys"},{"code":"HP:0100512","display":"Low levels of vitamin D"},{"code":"HP:0012156","display":"Hemophagocytosis"},{"code":"HP:0008209","display":"Premature ovarian insufficiency"},{"code":"HP:0004349","display":"Reduced bone mineral density"},{"code":"HP:0001924","display":"Sideroblastic anemia"},{"code":"HP:0011703","display":"Sinus tachycardia"},{"code":"HP:0010609","display":"Skin tags"},{"code":"HP:0002725","display":"Systemic lupus erythematosus"},{"code":"HP:0003193","display":"Allergic rhinitis"},{"code":"HP:0006896","display":"Hypnopompic 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aplasia"},{"code":"HP:0004443","display":"Lambdoidal craniosynostosis"},{"code":"HP:0008569","display":"Microtia, second degree"},{"code":"HP:0006277","display":"Pancreatic hyperplasia"},{"code":"HP:0010445","display":"Primum atrial septal defect"},{"code":"HP:0011640","display":"Single coronary artery origin"},{"code":"HP:0011608","display":"Type II truncus arteriosus"},{"code":"HP:0011327","display":"Posterior plagiocephaly"},{"code":"HP:0007655","display":"Eversion of lateral third of lower eyelids"},{"code":"HP:0010747","display":"Medial flaring of the eyebrow"},{"code":"HP:0005957","display":"Breathing dysregulation"},{"code":"HP:0000992","display":"Cutaneous photosensitivity"},{"code":"HP:0011995","display":"Atrial septal dilatation"},{"code":"HP:0000377","display":"Abnormality of the pinna"},{"code":"HP:0011266","display":"Microtia, first degree"},{"code":"HP:0012650","display":"Perisylvian polymicrogyria"},{"code":"HP:0004970","display":"Ascending tubular aorta aneurysm"},{"code":"HP:0008348","display":"Decreased circulating IgG2 level"},{"code":"HP:0012115","display":"Hepatitis"},{"code":"HP:0006979","display":"Sleep-wake cycle disturbance"},{"code":"HP:0008587","display":"Mild neurosensory hearing impairment"},{"code":"HP:0006097","display":"3-4 finger syndactyly"},{"code":"HP:0005263","display":"Gastritis"},{"code":"HP:0200043","display":"Verrucae"},{"code":"HP:0009600","display":"Flexion contracture of thumb"},{"code":"HP:0010818","display":"Generalized tonic seizure"},{"code":"HP:0002599","display":"Head titubation"},{"code":"HP:0002090","display":"Pneumonia"},{"code":"HP:0030423","display":"Splenic cyst"},{"code":"HP:0030187","display":"Titubation"},{"code":"HP:0002375","display":"Hypokinesia"},{"code":"HP:0007166","display":"Paroxysmal dyskinesia"},{"code":"HP:0003077","display":"Hyperlipidemia"},{"code":"HP:0000017","display":"Nocturia"},{"code":"HP:0100555","display":"Asymmetric growth"},{"code":"HP:0011847","display":"Giant cell tumor of bone"},{"code":"HP:0000112","display":"Nephropathy"},{"code":"HP:0000246","display":"Sinusitis"},{"code":"HP:0001012","display":"Multiple lipomas"},{"code":"HP:0000851","display":"Congenital hypothyroidism"},{"code":"HP:0002345","display":"Action tremor"},{"code":"HP:0002677","display":"Small foramen magnum"},{"code":"HP:0011947","display":"Respiratory tract infection"},{"code":"HP:0012151","display":"Hemothorax"},{"code":"HP:0005988","display":"Congenital muscular torticollis"},{"code":"HP:0002329","display":"Drowsiness"},{"code":"HP:0012395","display":"Seasonal allergy"},{"code":"HP:0011679","display":"Tetralogy of Fallot with pulmonary stenosis"},{"code":"HP:0001864","display":"Clinodactyly of the 5th toe"},{"code":"HP:0006934","display":"Congenital nystagmus"},{"code":"HP:0100355","display":"Contractures of the distal interphalangeal joint of the 5th toe"},{"code":"HP:0007894","display":"Hypopigmentation of the 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ptosis"}]}},{"name":"cache-id","valueString":"f7a2d3d6-b705-419a-b131-7120bb379529"},{"name":"valueSet","resource":{"resourceType":"ValueSet","status":"active","compose":{"inactive":true,"include":[{"system":"http://purl.obolibrary.org/obo/hp.owl","concept":[{"code":"HP:0010772","display":"Anomalous pulmonary venous return"}]}]}}},{"name":"_limit","valueString":"1000"},{"name":"_incomplete","valueString":"true"}]} +{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"},{"name":"includeDefinition","valueBoolean":false},{"name":"excludeNested","valueBoolean":true},{"name":"tx-resource","resource":{"resourceType":"CodeSystem","id":"hpo","text":{"status":"generated","div":"<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Properties</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Type</b></td><td><b>Description</b></td></tr><tr><td>parent</td><td>code</td><td>Parent codes.</td></tr><tr><td>imported</td><td>boolean</td><td>Indicates if the concept is imported from another code system.</td></tr><tr><td>root</td><td>boolean</td><td>Indicates if this concept is a root concept (i.e. Thing is equivalent or a direct parent)</td></tr><tr><td>deprecated</td><td>boolean</td><td>Indicates if this concept is deprecated.</td></tr></table><p><b>Filters</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Description</b></td><td><b>operator</b></td><td><b>Value</b></td></tr><tr><td>root</td><td/><td>= </td><td>True or false.</td></tr><tr><td>deprecated</td><td/><td>= </td><td>True or false.</td></tr><tr><td>imported</td><td/><td>= </td><td>True or false</td></tr></table><p>This code system <code>http://purl.obolibrary.org/obo/hp.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">HP:0000365<a name=\"hpo-HP.580000365\"> </a></td><td>Hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002564<a name=\"hpo-HP.580002564\"> </a></td><td>obsolete Malformation of the heart and great vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0001028<a name=\"hpo-HP.580001028\"> </a></td><td>Hemangioma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000476<a name=\"hpo-HP.580000476\"> </a></td><td>Cystic hygroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000568<a name=\"hpo-HP.580000568\"> </a></td><td>Microphthalmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000518<a name=\"hpo-HP.580000518\"> </a></td><td>Cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000612<a name=\"hpo-HP.580000612\"> </a></td><td>Iris coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000567<a name=\"hpo-HP.580000567\"> </a></td><td>Chorioretinal coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000316<a name=\"hpo-HP.580000316\"> </a></td><td>Hypertelorism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000482<a name=\"hpo-HP.580000482\"> </a></td><td>Microcornea</td></tr><tr><td style=\"white-space:nowrap\">HP:0000588<a name=\"hpo-HP.580000588\"> </a></td><td>Optic nerve coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0004426<a name=\"hpo-HP.580004426\"> </a></td><td>Abnormality of the cheek</td></tr><tr><td style=\"white-space:nowrap\">HP:0009125<a name=\"hpo-HP.580009125\"> </a></td><td>Lipodystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002023<a name=\"hpo-HP.580002023\"> </a></td><td>Anal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003468<a name=\"hpo-HP.580003468\"> </a></td><td>Abnormal vertebral morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000545<a name=\"hpo-HP.580000545\"> </a></td><td>Myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000122<a name=\"hpo-HP.580000122\"> </a></td><td>Unilateral renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002143<a name=\"hpo-HP.580002143\"> </a></td><td>Abnormality of the spinal cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0003508<a name=\"hpo-HP.580003508\"> </a></td><td>Proportionate short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0000271<a name=\"hpo-HP.580000271\"> </a></td><td>Abnormality of the face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000637<a name=\"hpo-HP.580000637\"> </a></td><td>Long palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000492<a name=\"hpo-HP.580000492\"> </a></td><td>Abnormal eyelid morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000389<a name=\"hpo-HP.580000389\"> </a></td><td>Chronic otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0000400<a name=\"hpo-HP.580000400\"> </a></td><td>Macrotia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000405<a name=\"hpo-HP.580000405\"> </a></td><td>Conductive hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0012712<a name=\"hpo-HP.580012712\"> </a></td><td>Mild hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0005280<a name=\"hpo-HP.580005280\"> </a></td><td>Depressed nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000431<a name=\"hpo-HP.580000431\"> </a></td><td>Wide nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000319<a name=\"hpo-HP.580000319\"> </a></td><td>Smooth philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000175<a name=\"hpo-HP.580000175\"> </a></td><td>Cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001611<a name=\"hpo-HP.580001611\"> </a></td><td>Nasal speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0002099<a name=\"hpo-HP.580002099\"> </a></td><td>Asthma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001397<a name=\"hpo-HP.580001397\"> </a></td><td>Hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001081<a name=\"hpo-HP.580001081\"> </a></td><td>Cholelithiasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002650<a name=\"hpo-HP.580002650\"> </a></td><td>Scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001212<a name=\"hpo-HP.580001212\"> </a></td><td>Prominent fingertip pads</td></tr><tr><td style=\"white-space:nowrap\">HP:0001328<a name=\"hpo-HP.580001328\"> </a></td><td>Specific learning disability</td></tr><tr><td style=\"white-space:nowrap\">HP:0000824<a name=\"hpo-HP.580000824\"> </a></td><td>Growth hormone deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002607<a name=\"hpo-HP.580002607\"> </a></td><td>Bowel incontinence</td></tr><tr><td style=\"white-space:nowrap\">HP:0100731<a name=\"hpo-HP.580100731\"> </a></td><td>Transverse facial cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0000528<a name=\"hpo-HP.580000528\"> </a></td><td>Anophthalmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000601<a name=\"hpo-HP.580000601\"> </a></td><td>Hypotelorism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000369<a name=\"hpo-HP.580000369\"> </a></td><td>Low-set ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001274<a name=\"hpo-HP.580001274\"> </a></td><td>Agenesis of corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002084<a name=\"hpo-HP.580002084\"> </a></td><td>Encephalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0007033<a name=\"hpo-HP.580007033\"> </a></td><td>Cerebellar dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100336<a name=\"hpo-HP.580100336\"> </a></td><td>Bilateral cleft lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0100337<a name=\"hpo-HP.580100337\"> </a></td><td>Bilateral cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001511<a name=\"hpo-HP.580001511\"> </a></td><td>Intrauterine growth retardation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011451<a name=\"hpo-HP.580011451\"> </a></td><td>Congenital microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000324<a name=\"hpo-HP.580000324\"> </a></td><td>Facial asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0000581<a name=\"hpo-HP.580000581\"> </a></td><td>Blepharophimosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000508<a name=\"hpo-HP.580000508\"> </a></td><td>Ptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008551<a name=\"hpo-HP.580008551\"> </a></td><td>Microtia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001631<a name=\"hpo-HP.580001631\"> </a></td><td>Atrial septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0000085<a name=\"hpo-HP.580000085\"> </a></td><td>Horseshoe kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0011927<a name=\"hpo-HP.580011927\"> </a></td><td>Short digit</td></tr><tr><td style=\"white-space:nowrap\">HP:0001156<a name=\"hpo-HP.580001156\"> </a></td><td>Brachydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002066<a name=\"hpo-HP.580002066\"> </a></td><td>Gait ataxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001250<a name=\"hpo-HP.580001250\"> </a></td><td>Seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001263<a name=\"hpo-HP.580001263\"> </a></td><td>Global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0001562<a name=\"hpo-HP.580001562\"> </a></td><td>Oligohydramnios</td></tr><tr><td style=\"white-space:nowrap\">HP:0001195<a name=\"hpo-HP.580001195\"> </a></td><td>Single umbilical artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0006349<a name=\"hpo-HP.580006349\"> </a></td><td>Agenesis of permanent teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000668<a name=\"hpo-HP.580000668\"> </a></td><td>Hypodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000677<a name=\"hpo-HP.580000677\"> </a></td><td>Oligodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001252<a name=\"hpo-HP.580001252\"> </a></td><td>Muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003429<a name=\"hpo-HP.580003429\"> </a></td><td>CNS hypomyelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0010864<a name=\"hpo-HP.580010864\"> </a></td><td>Intellectual disability, severe</td></tr><tr><td style=\"white-space:nowrap\">HP:0004325<a name=\"hpo-HP.580004325\"> </a></td><td>Decreased body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000666<a name=\"hpo-HP.580000666\"> </a></td><td>Horizontal nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000218<a name=\"hpo-HP.580000218\"> </a></td><td>High palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0010809<a name=\"hpo-HP.580010809\"> </a></td><td>Broad uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000767<a name=\"hpo-HP.580000767\"> </a></td><td>Pectus excavatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0003691<a name=\"hpo-HP.580003691\"> </a></td><td>Scapular winging</td></tr><tr><td style=\"white-space:nowrap\">HP:0002616<a name=\"hpo-HP.580002616\"> </a></td><td>Aortic root aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0001601<a name=\"hpo-HP.580001601\"> </a></td><td>Laryngomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002021<a name=\"hpo-HP.580002021\"> </a></td><td>Pyloric stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001388<a name=\"hpo-HP.580001388\"> </a></td><td>Joint laxity</td></tr><tr><td style=\"white-space:nowrap\">HP:0001187<a name=\"hpo-HP.580001187\"> </a></td><td>Hyperextensibility of the finger joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0000741<a name=\"hpo-HP.580000741\"> </a></td><td>Apathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000817<a name=\"hpo-HP.580000817\"> </a></td><td>Poor eye contact</td></tr><tr><td style=\"white-space:nowrap\">HP:0000821<a name=\"hpo-HP.580000821\"> </a></td><td>Hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000002<a name=\"hpo-HP.580000002\"> </a></td><td>Abnormality of body height</td></tr><tr><td style=\"white-space:nowrap\">HP:0000079<a name=\"hpo-HP.580000079\"> </a></td><td>Abnormality of the urinary system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000164<a name=\"hpo-HP.580000164\"> </a></td><td>Abnormality of the dentition</td></tr><tr><td style=\"white-space:nowrap\">HP:0000364<a name=\"hpo-HP.580000364\"> </a></td><td>Hearing abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000366<a name=\"hpo-HP.580000366\"> </a></td><td>Abnormality of the nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0000464<a name=\"hpo-HP.580000464\"> </a></td><td>Abnormality of the neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000707<a name=\"hpo-HP.580000707\"> </a></td><td>Abnormality of the nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000708<a name=\"hpo-HP.580000708\"> </a></td><td>Behavioral abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000769<a name=\"hpo-HP.580000769\"> </a></td><td>Abnormality of the breast</td></tr><tr><td style=\"white-space:nowrap\">HP:0000772<a name=\"hpo-HP.580000772\"> </a></td><td>Abnormality of the ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000775<a name=\"hpo-HP.580000775\"> </a></td><td>Abnormality of the diaphragm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000889<a name=\"hpo-HP.580000889\"> </a></td><td>Abnormality of the clavicle</td></tr><tr><td style=\"white-space:nowrap\">HP:0000925<a name=\"hpo-HP.580000925\"> </a></td><td>Abnormality of the vertebral column</td></tr><tr><td style=\"white-space:nowrap\">HP:0001080<a name=\"hpo-HP.580001080\"> </a></td><td>Biliary tract abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001392<a name=\"hpo-HP.580001392\"> </a></td><td>Abnormality of the liver</td></tr><tr><td style=\"white-space:nowrap\">HP:0001438<a name=\"hpo-HP.580001438\"> </a></td><td>Abnormal abdomen morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001608<a name=\"hpo-HP.580001608\"> </a></td><td>Abnormality of the voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001627<a name=\"hpo-HP.580001627\"> </a></td><td>Abnormal heart morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001732<a name=\"hpo-HP.580001732\"> </a></td><td>Abnormality of the pancreas</td></tr><tr><td style=\"white-space:nowrap\">HP:0001739<a name=\"hpo-HP.580001739\"> </a></td><td>Abnormality of the nasopharynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0001743<a name=\"hpo-HP.580001743\"> </a></td><td>Abnormality of the spleen</td></tr><tr><td style=\"white-space:nowrap\">HP:0001760<a name=\"hpo-HP.580001760\"> </a></td><td>Abnormal foot morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001871<a name=\"hpo-HP.580001871\"> </a></td><td>Abnormality of blood and blood-forming tissues</td></tr><tr><td style=\"white-space:nowrap\">HP:0002031<a name=\"hpo-HP.580002031\"> </a></td><td>Abnormal esophagus morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002244<a name=\"hpo-HP.580002244\"> </a></td><td>Abnormality of the small intestine</td></tr><tr><td style=\"white-space:nowrap\">HP:0002246<a name=\"hpo-HP.580002246\"> </a></td><td>Abnormality of the duodenum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002250<a name=\"hpo-HP.580002250\"> </a></td><td>Abnormal large intestine morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002644<a name=\"hpo-HP.580002644\"> </a></td><td>Abnormality of pelvic girdle bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002664<a name=\"hpo-HP.580002664\"> </a></td><td>Neoplasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0002715<a name=\"hpo-HP.580002715\"> </a></td><td>Abnormality of the immune system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002814<a name=\"hpo-HP.580002814\"> </a></td><td>Abnormality of the lower limb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002817<a name=\"hpo-HP.580002817\"> </a></td><td>Abnormality of the upper limb</td></tr><tr><td style=\"white-space:nowrap\">HP:0005483<a name=\"hpo-HP.580005483\"> </a></td><td>Abnormal epiglottis morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008777<a name=\"hpo-HP.580008777\"> </a></td><td>Abnormal vocal cord morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011844<a name=\"hpo-HP.580011844\"> </a></td><td>Abnormal appendicular skeleton morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012732<a name=\"hpo-HP.580012732\"> </a></td><td>Anorectal anomaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001508<a name=\"hpo-HP.580001508\"> </a></td><td>Failure to thrive</td></tr><tr><td style=\"white-space:nowrap\">HP:0002902<a name=\"hpo-HP.580002902\"> </a></td><td>Hyponatremia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012236<a name=\"hpo-HP.580012236\"> </a></td><td>Elevated sweat chloride</td></tr><tr><td style=\"white-space:nowrap\">HP:0000347<a name=\"hpo-HP.580000347\"> </a></td><td>Micrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000926<a name=\"hpo-HP.580000926\"> </a></td><td>Platyspondyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001371<a name=\"hpo-HP.580001371\"> </a></td><td>Flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0001875<a name=\"hpo-HP.580001875\"> </a></td><td>Neutropenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001888<a name=\"hpo-HP.580001888\"> </a></td><td>Lymphopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002857<a name=\"hpo-HP.580002857\"> </a></td><td>Genu valgum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002986<a name=\"hpo-HP.580002986\"> </a></td><td>Radial bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003015<a name=\"hpo-HP.580003015\"> </a></td><td>Flared metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003025<a name=\"hpo-HP.580003025\"> </a></td><td>Metaphyseal irregularity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003097<a name=\"hpo-HP.580003097\"> </a></td><td>Short femur</td></tr><tr><td style=\"white-space:nowrap\">HP:0003300<a name=\"hpo-HP.580003300\"> </a></td><td>Ovoid vertebral bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0003307<a name=\"hpo-HP.580003307\"> </a></td><td>Hyperlordosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004209<a name=\"hpo-HP.580004209\"> </a></td><td>Clinodactyly of the 5th finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0004322<a name=\"hpo-HP.580004322\"> </a></td><td>Short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0005792<a name=\"hpo-HP.580005792\"> </a></td><td>Short humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0006248<a name=\"hpo-HP.580006248\"> </a></td><td>Limited wrist movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0000944<a name=\"hpo-HP.580000944\"> </a></td><td>Abnormality of the metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011921<a name=\"hpo-HP.580011921\"> </a></td><td>Exudative pleural effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0003043<a name=\"hpo-HP.580003043\"> </a></td><td>Abnormality of the shoulder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000290<a name=\"hpo-HP.580000290\"> </a></td><td>Abnormality of the forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0005288<a name=\"hpo-HP.580005288\"> </a></td><td>Abnormality of the nares</td></tr><tr><td style=\"white-space:nowrap\">HP:0000234<a name=\"hpo-HP.580000234\"> </a></td><td>Abnormality of the head</td></tr><tr><td style=\"white-space:nowrap\">HP:0004323<a name=\"hpo-HP.580004323\"> </a></td><td>Abnormality of body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000483<a name=\"hpo-HP.580000483\"> </a></td><td>Astigmatism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011003<a name=\"hpo-HP.580011003\"> </a></td><td>High myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000470<a name=\"hpo-HP.580000470\"> </a></td><td>Short neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0030044<a name=\"hpo-HP.580030044\"> </a></td><td>Flexion contracture of digit</td></tr><tr><td style=\"white-space:nowrap\">HP:0100871<a name=\"hpo-HP.580100871\"> </a></td><td>Abnormality of the palm</td></tr><tr><td style=\"white-space:nowrap\">HP:0004334<a name=\"hpo-HP.580004334\"> </a></td><td>Dermal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001845<a name=\"hpo-HP.580001845\"> </a></td><td>Overlapping toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000496<a name=\"hpo-HP.580000496\"> </a></td><td>Abnormality of eye movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0001780<a name=\"hpo-HP.580001780\"> </a></td><td>Abnormality of toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001626<a name=\"hpo-HP.580001626\"> </a></td><td>Abnormality of the cardiovascular system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002086<a name=\"hpo-HP.580002086\"> </a></td><td>Abnormality of the respiratory system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000818<a name=\"hpo-HP.580000818\"> </a></td><td>Abnormality of the endocrine system</td></tr><tr><td style=\"white-space:nowrap\">HP:0012372<a name=\"hpo-HP.580012372\"> </a></td><td>Abnormal eye morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009473<a name=\"hpo-HP.580009473\"> </a></td><td>Joint contracture of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0003199<a name=\"hpo-HP.580003199\"> </a></td><td>Decreased muscle mass</td></tr><tr><td style=\"white-space:nowrap\">HP:0003202<a name=\"hpo-HP.580003202\"> </a></td><td>Skeletal muscle atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003551<a name=\"hpo-HP.580003551\"> </a></td><td>Difficulty climbing stairs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002355<a name=\"hpo-HP.580002355\"> </a></td><td>Difficulty walking</td></tr><tr><td style=\"white-space:nowrap\">HP:0003546<a name=\"hpo-HP.580003546\"> </a></td><td>Exercise intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0003325<a name=\"hpo-HP.580003325\"> </a></td><td>Limb-girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003701<a name=\"hpo-HP.580003701\"> </a></td><td>Proximal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003547<a name=\"hpo-HP.580003547\"> </a></td><td>Shoulder girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0007340<a name=\"hpo-HP.580007340\"> </a></td><td>Lower limb muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002168<a name=\"hpo-HP.580002168\"> </a></td><td>Scanning speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0001265<a name=\"hpo-HP.580001265\"> </a></td><td>Hyporeflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001284<a name=\"hpo-HP.580001284\"> </a></td><td>Areflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003477<a name=\"hpo-HP.580003477\"> </a></td><td>Peripheral axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000924<a name=\"hpo-HP.580000924\"> </a></td><td>Abnormality of the skeletal system</td></tr><tr><td style=\"white-space:nowrap\">HP:0001291<a name=\"hpo-HP.580001291\"> </a></td><td>Abnormal cranial nerve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003687<a name=\"hpo-HP.580003687\"> </a></td><td>Centrally nucleated skeletal muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0001324<a name=\"hpo-HP.580001324\"> </a></td><td>Muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002515<a name=\"hpo-HP.580002515\"> </a></td><td>Waddling gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0100280<a name=\"hpo-HP.580100280\"> </a></td><td>Crohn's disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0002631<a name=\"hpo-HP.580002631\"> </a></td><td>obsolete Dilatation of ascending aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0100026<a name=\"hpo-HP.580100026\"> </a></td><td>Arteriovenous malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002637<a name=\"hpo-HP.580002637\"> </a></td><td>Cerebral ischemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002619<a name=\"hpo-HP.580002619\"> </a></td><td>Varicose veins</td></tr><tr><td style=\"white-space:nowrap\">HP:0001159<a name=\"hpo-HP.580001159\"> </a></td><td>Syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002069<a name=\"hpo-HP.580002069\"> </a></td><td>Bilateral tonic-clonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000977<a name=\"hpo-HP.580000977\"> </a></td><td>Soft skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010648<a name=\"hpo-HP.580010648\"> </a></td><td>Dermal translucency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000978<a name=\"hpo-HP.580000978\"> </a></td><td>Bruising susceptibility</td></tr><tr><td style=\"white-space:nowrap\">HP:0001956<a name=\"hpo-HP.580001956\"> </a></td><td>Truncal obesity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000189<a name=\"hpo-HP.580000189\"> </a></td><td>Narrow palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000678<a name=\"hpo-HP.580000678\"> </a></td><td>Dental crowding</td></tr><tr><td style=\"white-space:nowrap\">HP:0002870<a name=\"hpo-HP.580002870\"> </a></td><td>Obstructive sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001763<a name=\"hpo-HP.580001763\"> </a></td><td>Pes planus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000782<a name=\"hpo-HP.580000782\"> </a></td><td>Abnormality of the scapula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001600<a name=\"hpo-HP.580001600\"> </a></td><td>Abnormality of the larynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0002088<a name=\"hpo-HP.580002088\"> </a></td><td>Abnormal lung morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011407<a name=\"hpo-HP.580011407\"> </a></td><td>Proportionate tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0000541<a name=\"hpo-HP.580000541\"> </a></td><td>Retinal detachment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001373<a name=\"hpo-HP.580001373\"> </a></td><td>Joint dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000938<a name=\"hpo-HP.580000938\"> </a></td><td>Osteopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002942<a name=\"hpo-HP.580002942\"> </a></td><td>Thoracic kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001840<a name=\"hpo-HP.580001840\"> </a></td><td>Metatarsus adductus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001844<a name=\"hpo-HP.580001844\"> </a></td><td>Abnormality of the hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0001765<a name=\"hpo-HP.580001765\"> </a></td><td>Hammertoe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000606<a name=\"hpo-HP.580000606\"> </a></td><td>Abnormality of the periorbital region</td></tr><tr><td style=\"white-space:nowrap\">HP:0002757<a name=\"hpo-HP.580002757\"> </a></td><td>Recurrent fractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0000647<a name=\"hpo-HP.580000647\"> </a></td><td>Sclerocornea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001166<a name=\"hpo-HP.580001166\"> </a></td><td>Arachnodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005490<a name=\"hpo-HP.580005490\"> </a></td><td>Postnatal macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0011363<a name=\"hpo-HP.580011363\"> </a></td><td>Abnormality of hair growth rate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000276<a name=\"hpo-HP.580000276\"> </a></td><td>Long face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000275<a name=\"hpo-HP.580000275\"> </a></td><td>Narrow face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000337<a name=\"hpo-HP.580000337\"> </a></td><td>Broad forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0002267<a name=\"hpo-HP.580002267\"> </a></td><td>Exaggerated startle response</td></tr><tr><td style=\"white-space:nowrap\">HP:0002187<a name=\"hpo-HP.580002187\"> </a></td><td>Intellectual disability, profound</td></tr><tr><td style=\"white-space:nowrap\">HP:0000728<a name=\"hpo-HP.580000728\"> </a></td><td>Impaired ability to form peer relationships</td></tr><tr><td style=\"white-space:nowrap\">HP:0000733<a name=\"hpo-HP.580000733\"> </a></td><td>Stereotypy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000739<a name=\"hpo-HP.580000739\"> </a></td><td>Anxiety</td></tr><tr><td style=\"white-space:nowrap\">HP:0000929<a name=\"hpo-HP.580000929\"> </a></td><td>Abnormal skull morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001965<a name=\"hpo-HP.580001965\"> </a></td><td>Abnormal scalp morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100538<a name=\"hpo-HP.580100538\"> </a></td><td>Abnormality of the supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0000309<a name=\"hpo-HP.580000309\"> </a></td><td>Abnormality of the midface</td></tr><tr><td style=\"white-space:nowrap\">HP:0000277<a name=\"hpo-HP.580000277\"> </a></td><td>Abnormality of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000765<a name=\"hpo-HP.580000765\"> </a></td><td>Abnormality of the thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0100008<a name=\"hpo-HP.580100008\"> </a></td><td>Schwannoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0030038<a name=\"hpo-HP.580030038\"> </a></td><td>Enchondroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0100777<a name=\"hpo-HP.580100777\"> </a></td><td>Exostoses</td></tr><tr><td style=\"white-space:nowrap\">HP:0011663<a name=\"hpo-HP.580011663\"> </a></td><td>Right ventricular cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011675<a name=\"hpo-HP.580011675\"> </a></td><td>Arrhythmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001962<a name=\"hpo-HP.580001962\"> </a></td><td>Palpitations</td></tr><tr><td style=\"white-space:nowrap\">HP:0001279<a name=\"hpo-HP.580001279\"> </a></td><td>Syncope</td></tr><tr><td style=\"white-space:nowrap\">HP:0004756<a name=\"hpo-HP.580004756\"> </a></td><td>Ventricular tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000252<a name=\"hpo-HP.580000252\"> </a></td><td>Microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000303<a name=\"hpo-HP.580000303\"> </a></td><td>Mandibular prognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000664<a name=\"hpo-HP.580000664\"> </a></td><td>Synophrys</td></tr><tr><td style=\"white-space:nowrap\">HP:0001609<a name=\"hpo-HP.580001609\"> </a></td><td>Hoarse voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0002558<a name=\"hpo-HP.580002558\"> </a></td><td>Supernumerary nipple</td></tr><tr><td style=\"white-space:nowrap\">HP:0001634<a name=\"hpo-HP.580001634\"> </a></td><td>Mitral valve prolapse</td></tr><tr><td style=\"white-space:nowrap\">HP:0000028<a name=\"hpo-HP.580000028\"> </a></td><td>Cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000973<a name=\"hpo-HP.580000973\"> </a></td><td>Cutis laxa</td></tr><tr><td style=\"white-space:nowrap\">HP:0001518<a name=\"hpo-HP.580001518\"> </a></td><td>Small for gestational age</td></tr><tr><td style=\"white-space:nowrap\">HP:0000527<a name=\"hpo-HP.580000527\"> </a></td><td>Long eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002808<a name=\"hpo-HP.580002808\"> </a></td><td>Kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000248<a name=\"hpo-HP.580000248\"> </a></td><td>Brachycephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000505<a name=\"hpo-HP.580000505\"> </a></td><td>Visual impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000512<a name=\"hpo-HP.580000512\"> </a></td><td>Abnormal electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:0000517<a name=\"hpo-HP.580000517\"> </a></td><td>Abnormality of the lens</td></tr><tr><td style=\"white-space:nowrap\">HP:0000529<a name=\"hpo-HP.580000529\"> </a></td><td>Progressive visual loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0000586<a name=\"hpo-HP.580000586\"> </a></td><td>Shallow orbits</td></tr><tr><td style=\"white-space:nowrap\">HP:0000603<a name=\"hpo-HP.580000603\"> </a></td><td>Central scotoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000939<a name=\"hpo-HP.580000939\"> </a></td><td>Osteoporosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001377<a name=\"hpo-HP.580001377\"> </a></td><td>Limited elbow extension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001387<a name=\"hpo-HP.580001387\"> </a></td><td>Joint stiffness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001822<a name=\"hpo-HP.580001822\"> </a></td><td>Hallux valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0002657<a name=\"hpo-HP.580002657\"> </a></td><td>Spondylometaphyseal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003026<a name=\"hpo-HP.580003026\"> </a></td><td>Short long bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0006462<a name=\"hpo-HP.580006462\"> </a></td><td>Generalized bone demineralization</td></tr><tr><td style=\"white-space:nowrap\">HP:0008873<a name=\"hpo-HP.580008873\"> </a></td><td>Disproportionate short-limb short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0008905<a name=\"hpo-HP.580008905\"> </a></td><td>Rhizomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008922<a name=\"hpo-HP.580008922\"> </a></td><td>Childhood-onset short-trunk short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0200020<a name=\"hpo-HP.580200020\"> </a></td><td>Corneal erosion</td></tr><tr><td style=\"white-space:nowrap\">HP:0001172<a name=\"hpo-HP.580001172\"> </a></td><td>Abnormal thumb morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002286<a name=\"hpo-HP.580002286\"> </a></td><td>Fair hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0010719<a name=\"hpo-HP.580010719\"> </a></td><td>Abnormality of hair texture</td></tr><tr><td style=\"white-space:nowrap\">HP:0010720<a name=\"hpo-HP.580010720\"> </a></td><td>Abnormal hair pattern</td></tr><tr><td style=\"white-space:nowrap\">HP:0001635<a name=\"hpo-HP.580001635\"> </a></td><td>Congestive heart failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001644<a name=\"hpo-HP.580001644\"> </a></td><td>Dilated cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001663<a name=\"hpo-HP.580001663\"> </a></td><td>Ventricular fibrillation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011712<a name=\"hpo-HP.580011712\"> </a></td><td>Right bundle branch block</td></tr><tr><td style=\"white-space:nowrap\">HP:0000272<a name=\"hpo-HP.580000272\"> </a></td><td>Malar flattening</td></tr><tr><td style=\"white-space:nowrap\">HP:0000286<a name=\"hpo-HP.580000286\"> </a></td><td>Epicanthus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000322<a name=\"hpo-HP.580000322\"> </a></td><td>Short philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000463<a name=\"hpo-HP.580000463\"> </a></td><td>Anteverted nares</td></tr><tr><td style=\"white-space:nowrap\">HP:0000494<a name=\"hpo-HP.580000494\"> </a></td><td>Downslanted palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0000543<a name=\"hpo-HP.580000543\"> </a></td><td>Optic disc pallor</td></tr><tr><td style=\"white-space:nowrap\">HP:0000699<a name=\"hpo-HP.580000699\"> </a></td><td>Diastema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000773<a name=\"hpo-HP.580000773\"> </a></td><td>Short ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000887<a name=\"hpo-HP.580000887\"> </a></td><td>Cupped ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000946<a name=\"hpo-HP.580000946\"> </a></td><td>Hypoplastic ilia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000954<a name=\"hpo-HP.580000954\"> </a></td><td>Single transverse palmar crease</td></tr><tr><td style=\"white-space:nowrap\">HP:0001182<a name=\"hpo-HP.580001182\"> </a></td><td>Tapered finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0001537<a name=\"hpo-HP.580001537\"> </a></td><td>Umbilical hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002007<a name=\"hpo-HP.580002007\"> </a></td><td>Frontal bossing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002980<a name=\"hpo-HP.580002980\"> </a></td><td>Femoral bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002982<a name=\"hpo-HP.580002982\"> </a></td><td>Tibial bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003021<a name=\"hpo-HP.580003021\"> </a></td><td>Metaphyseal cupping</td></tr><tr><td style=\"white-space:nowrap\">HP:0005011<a name=\"hpo-HP.580005011\"> </a></td><td>Mesomelic arm shortening</td></tr><tr><td style=\"white-space:nowrap\">HP:0008803<a name=\"hpo-HP.580008803\"> </a></td><td>obsolete Narrow sacroiliac notch</td></tr><tr><td style=\"white-space:nowrap\">HP:0009117<a name=\"hpo-HP.580009117\"> </a></td><td>Aplasia/Hypoplasia of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0011220<a name=\"hpo-HP.580011220\"> </a></td><td>Prominent forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0012801<a name=\"hpo-HP.580012801\"> </a></td><td>Narrow jaw</td></tr><tr><td style=\"white-space:nowrap\">HP:0000243<a name=\"hpo-HP.580000243\"> </a></td><td>Trigonocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000358<a name=\"hpo-HP.580000358\"> </a></td><td>Posteriorly rotated ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0000411<a name=\"hpo-HP.580000411\"> </a></td><td>Protruding ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000646<a name=\"hpo-HP.580000646\"> </a></td><td>Amblyopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002812<a name=\"hpo-HP.580002812\"> </a></td><td>Coxa vara</td></tr><tr><td style=\"white-space:nowrap\">HP:0002970<a name=\"hpo-HP.580002970\"> </a></td><td>Genu varum</td></tr><tr><td style=\"white-space:nowrap\">HP:0012775<a name=\"hpo-HP.580012775\"> </a></td><td>Stellate iris</td></tr><tr><td style=\"white-space:nowrap\">HP:0000278<a name=\"hpo-HP.580000278\"> </a></td><td>Retrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0009796<a name=\"hpo-HP.580009796\"> </a></td><td>Branchial cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0002474<a name=\"hpo-HP.580002474\"> </a></td><td>Expressive language delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0007018<a name=\"hpo-HP.580007018\"> </a></td><td>Attention deficit hyperactivity disorder</td></tr><tr><td style=\"white-space:nowrap\">HP:0003198<a name=\"hpo-HP.580003198\"> </a></td><td>Myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003324<a name=\"hpo-HP.580003324\"> </a></td><td>Generalized muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003552<a name=\"hpo-HP.580003552\"> </a></td><td>Muscle stiffness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003554<a name=\"hpo-HP.580003554\"> </a></td><td>Type 2 muscle fiber atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003557<a name=\"hpo-HP.580003557\"> </a></td><td>Increased variability in muscle fiber diameter</td></tr><tr><td style=\"white-space:nowrap\">HP:0009025<a name=\"hpo-HP.580009025\"> </a></td><td>Increased connective tissue</td></tr><tr><td style=\"white-space:nowrap\">HP:0003635<a name=\"hpo-HP.580003635\"> </a></td><td>Loss of subcutaneous adipose tissue in limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002597<a name=\"hpo-HP.580002597\"> </a></td><td>Abnormality of the vasculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0001649<a name=\"hpo-HP.580001649\"> </a></td><td>Tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001638<a name=\"hpo-HP.580001638\"> </a></td><td>Cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001654<a name=\"hpo-HP.580001654\"> </a></td><td>Abnormal heart valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001671<a name=\"hpo-HP.580001671\"> </a></td><td>Abnormal cardiac septum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000103<a name=\"hpo-HP.580000103\"> </a></td><td>Polyuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0000114<a name=\"hpo-HP.580000114\"> </a></td><td>Proximal tubulopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001878<a name=\"hpo-HP.580001878\"> </a></td><td>Hemolytic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001931<a name=\"hpo-HP.580001931\"> </a></td><td>Hypochromic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001935<a name=\"hpo-HP.580001935\"> </a></td><td>Microcytic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001959<a name=\"hpo-HP.580001959\"> </a></td><td>Polydipsia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001994<a name=\"hpo-HP.580001994\"> </a></td><td>Renal Fanconi syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002134<a name=\"hpo-HP.580002134\"> </a></td><td>Abnormality of the basal ganglia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002188<a name=\"hpo-HP.580002188\"> </a></td><td>Delayed CNS myelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0002908<a name=\"hpo-HP.580002908\"> </a></td><td>Conjugated hyperbilirubinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003774<a name=\"hpo-HP.580003774\"> </a></td><td>Stage 5 chronic kidney disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0010700<a name=\"hpo-HP.580010700\"> </a></td><td>obsolete Total cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000193<a name=\"hpo-HP.580000193\"> </a></td><td>Bifid uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000219<a name=\"hpo-HP.580000219\"> </a></td><td>Thin upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000426<a name=\"hpo-HP.580000426\"> </a></td><td>Prominent nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000452<a name=\"hpo-HP.580000452\"> </a></td><td>Choanal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000490<a name=\"hpo-HP.580000490\"> </a></td><td>Deeply set eye</td></tr><tr><td style=\"white-space:nowrap\">HP:0000540<a name=\"hpo-HP.580000540\"> </a></td><td>Hypermetropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000579<a name=\"hpo-HP.580000579\"> </a></td><td>Nasolacrimal duct obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0000684<a name=\"hpo-HP.580000684\"> </a></td><td>Delayed eruption of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000960<a name=\"hpo-HP.580000960\"> </a></td><td>Sacral dimple</td></tr><tr><td style=\"white-space:nowrap\">HP:0000998<a name=\"hpo-HP.580000998\"> </a></td><td>Hypertrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001643<a name=\"hpo-HP.580001643\"> </a></td><td>Patent ductus arteriosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010813<a name=\"hpo-HP.580010813\"> </a></td><td>Abnormal number of hair whorls</td></tr><tr><td style=\"white-space:nowrap\">HP:0012384<a name=\"hpo-HP.580012384\"> </a></td><td>Rhinitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012745<a name=\"hpo-HP.580012745\"> </a></td><td>Short palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000359<a name=\"hpo-HP.580000359\"> </a></td><td>Abnormality of the inner ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000429<a name=\"hpo-HP.580000429\"> </a></td><td>Abnormality of the nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000436<a name=\"hpo-HP.580000436\"> </a></td><td>Abnormality of the nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000499<a name=\"hpo-HP.580000499\"> </a></td><td>Abnormal eyelash morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000534<a name=\"hpo-HP.580000534\"> </a></td><td>Abnormal eyebrow morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000951<a name=\"hpo-HP.580000951\"> </a></td><td>Abnormality of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001000<a name=\"hpo-HP.580001000\"> </a></td><td>Abnormality of skin pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001597<a name=\"hpo-HP.580001597\"> </a></td><td>Abnormality of the nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0006483<a name=\"hpo-HP.580006483\"> </a></td><td>Abnormal number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009929<a name=\"hpo-HP.580009929\"> </a></td><td>Abnormality of the columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0011119<a name=\"hpo-HP.580011119\"> </a></td><td>Abnormality of the nasal dorsum</td></tr><tr><td style=\"white-space:nowrap\">HP:0012808<a name=\"hpo-HP.580012808\"> </a></td><td>Abnormal nasal base</td></tr><tr><td style=\"white-space:nowrap\">HP:0100490<a name=\"hpo-HP.580100490\"> </a></td><td>Camptodactyly of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0000964<a name=\"hpo-HP.580000964\"> </a></td><td>Eczema</td></tr><tr><td style=\"white-space:nowrap\">HP:0004442<a name=\"hpo-HP.580004442\"> </a></td><td>Sagittal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000414<a name=\"hpo-HP.580000414\"> </a></td><td>Bulbous nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0003180<a name=\"hpo-HP.580003180\"> </a></td><td>Flat acetabular roof</td></tr><tr><td style=\"white-space:nowrap\">HP:0000422<a name=\"hpo-HP.580000422\"> </a></td><td>Abnormality of the nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000614<a name=\"hpo-HP.580000614\"> </a></td><td>Abnormal nasolacrimal system morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001167<a name=\"hpo-HP.580001167\"> </a></td><td>Abnormality of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0001595<a name=\"hpo-HP.580001595\"> </a></td><td>Abnormal hair morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012373<a name=\"hpo-HP.580012373\"> </a></td><td>Abnormal eye physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001655<a name=\"hpo-HP.580001655\"> </a></td><td>Patent foramen ovale</td></tr><tr><td style=\"white-space:nowrap\">HP:0001647<a name=\"hpo-HP.580001647\"> </a></td><td>Bicuspid aortic valve</td></tr><tr><td style=\"white-space:nowrap\">HP:0000574<a name=\"hpo-HP.580000574\"> </a></td><td>Thick eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0001169<a name=\"hpo-HP.580001169\"> </a></td><td>Broad palm</td></tr><tr><td style=\"white-space:nowrap\">HP:0006471<a name=\"hpo-HP.580006471\"> </a></td><td>Fixed elbow flexion</td></tr><tr><td style=\"white-space:nowrap\">HP:0008689<a name=\"hpo-HP.580008689\"> </a></td><td>Bilateral cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011304<a name=\"hpo-HP.580011304\"> </a></td><td>Broad thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0005110<a name=\"hpo-HP.580005110\"> </a></td><td>Atrial fibrillation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001633<a name=\"hpo-HP.580001633\"> </a></td><td>Abnormal mitral valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001641<a name=\"hpo-HP.580001641\"> </a></td><td>Abnormal pulmonary valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001702<a name=\"hpo-HP.580001702\"> </a></td><td>Abnormal tricuspid valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000012<a name=\"hpo-HP.580000012\"> </a></td><td>Urinary urgency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000020<a name=\"hpo-HP.580000020\"> </a></td><td>Urinary incontinence</td></tr><tr><td style=\"white-space:nowrap\">HP:0000131<a name=\"hpo-HP.580000131\"> </a></td><td>Uterine leiomyoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000132<a name=\"hpo-HP.580000132\"> </a></td><td>Menorrhagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000138<a name=\"hpo-HP.580000138\"> </a></td><td>Ovarian cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0000853<a name=\"hpo-HP.580000853\"> </a></td><td>Goiter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000953<a name=\"hpo-HP.580000953\"> </a></td><td>Hyperpigmentation of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001061<a name=\"hpo-HP.580001061\"> </a></td><td>Acne</td></tr><tr><td style=\"white-space:nowrap\">HP:0002315<a name=\"hpo-HP.580002315\"> </a></td><td>Headache</td></tr><tr><td style=\"white-space:nowrap\">HP:0004324<a name=\"hpo-HP.580004324\"> </a></td><td>Increased body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000069<a name=\"hpo-HP.580000069\"> </a></td><td>Abnormality of the ureter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000077<a name=\"hpo-HP.580000077\"> </a></td><td>Abnormality of the kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0000759<a name=\"hpo-HP.580000759\"> </a></td><td>Abnormal peripheral nervous system morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008069<a name=\"hpo-HP.580008069\"> </a></td><td>Neoplasm of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011276<a name=\"hpo-HP.580011276\"> </a></td><td>Vascular skin abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000705<a name=\"hpo-HP.580000705\"> </a></td><td>Amelogenesis imperfecta</td></tr><tr><td style=\"white-space:nowrap\">HP:0001256<a name=\"hpo-HP.580001256\"> </a></td><td>Intellectual disability, mild</td></tr><tr><td style=\"white-space:nowrap\">HP:0000325<a name=\"hpo-HP.580000325\"> </a></td><td>Triangular face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000160<a name=\"hpo-HP.580000160\"> </a></td><td>Narrow mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009487<a name=\"hpo-HP.580009487\"> </a></td><td>Ulnar deviation of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0001249<a name=\"hpo-HP.580001249\"> </a></td><td>Intellectual disability</td></tr><tr><td style=\"white-space:nowrap\">HP:0008064<a name=\"hpo-HP.580008064\"> </a></td><td>Ichthyosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000311<a name=\"hpo-HP.580000311\"> </a></td><td>Round face</td></tr><tr><td style=\"white-space:nowrap\">HP:0001653<a name=\"hpo-HP.580001653\"> </a></td><td>Mitral regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001771<a name=\"hpo-HP.580001771\"> </a></td><td>Achilles tendon contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0012032<a name=\"hpo-HP.580012032\"> </a></td><td>Lipoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0012368<a name=\"hpo-HP.580012368\"> </a></td><td>Flat face</td></tr><tr><td style=\"white-space:nowrap\">HP:0030053<a name=\"hpo-HP.580030053\"> </a></td><td>Stiff skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011124<a name=\"hpo-HP.580011124\"> </a></td><td>Abnormality of epidermal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011097<a name=\"hpo-HP.580011097\"> </a></td><td>Epileptic spasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000407<a name=\"hpo-HP.580000407\"> </a></td><td>Sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000331<a name=\"hpo-HP.580000331\"> </a></td><td>Short chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000340<a name=\"hpo-HP.580000340\"> </a></td><td>Sloping forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0000486<a name=\"hpo-HP.580000486\"> </a></td><td>Strabismus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000713<a name=\"hpo-HP.580000713\"> </a></td><td>Agitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000802<a name=\"hpo-HP.580000802\"> </a></td><td>Impotence</td></tr><tr><td style=\"white-space:nowrap\">HP:0001272<a name=\"hpo-HP.580001272\"> </a></td><td>Cerebellar atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001276<a name=\"hpo-HP.580001276\"> </a></td><td>Hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001321<a name=\"hpo-HP.580001321\"> </a></td><td>Cerebellar hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001322<a name=\"hpo-HP.580001322\"> </a></td><td>obsolete Brain very small</td></tr><tr><td style=\"white-space:nowrap\">HP:0002061<a name=\"hpo-HP.580002061\"> </a></td><td>Lower limb spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002529<a name=\"hpo-HP.580002529\"> </a></td><td>Neuronal loss in central nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002540<a name=\"hpo-HP.580002540\"> </a></td><td>Inability to walk</td></tr><tr><td style=\"white-space:nowrap\">HP:0005484<a name=\"hpo-HP.580005484\"> </a></td><td>Postnatal microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0012850<a name=\"hpo-HP.580012850\"> </a></td><td>Small intestinal dysmotility</td></tr><tr><td style=\"white-space:nowrap\">HP:0000504<a name=\"hpo-HP.580000504\"> </a></td><td>Abnormality of vision</td></tr><tr><td style=\"white-space:nowrap\">HP:0002118<a name=\"hpo-HP.580002118\"> </a></td><td>Abnormality of the cerebral ventricles</td></tr><tr><td style=\"white-space:nowrap\">HP:0002363<a name=\"hpo-HP.580002363\"> </a></td><td>Abnormality of brainstem morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0010651<a name=\"hpo-HP.580010651\"> </a></td><td>Abnormal meningeal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100024<a name=\"hpo-HP.580100024\"> </a></td><td>Conspicuously happy disposition</td></tr><tr><td style=\"white-space:nowrap\">HP:0002538<a name=\"hpo-HP.580002538\"> </a></td><td>Abnormality of the cerebral cortex</td></tr><tr><td style=\"white-space:nowrap\">HP:0000054<a name=\"hpo-HP.580000054\"> </a></td><td>Micropenis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000215<a name=\"hpo-HP.580000215\"> </a></td><td>Thick upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000293<a name=\"hpo-HP.580000293\"> </a></td><td>Full cheeks</td></tr><tr><td style=\"white-space:nowrap\">HP:0000349<a name=\"hpo-HP.580000349\"> </a></td><td>Widow's peak</td></tr><tr><td style=\"white-space:nowrap\">HP:0000444<a name=\"hpo-HP.580000444\"> </a></td><td>Convex nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000506<a name=\"hpo-HP.580000506\"> </a></td><td>Telecanthus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000592<a name=\"hpo-HP.580000592\"> </a></td><td>Blue sclerae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000691<a name=\"hpo-HP.580000691\"> </a></td><td>Microdontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000698<a name=\"hpo-HP.580000698\"> </a></td><td>Conical tooth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002000<a name=\"hpo-HP.580002000\"> </a></td><td>Short columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0002097<a name=\"hpo-HP.580002097\"> </a></td><td>Emphysema</td></tr><tr><td style=\"white-space:nowrap\">HP:0002209<a name=\"hpo-HP.580002209\"> </a></td><td>Sparse scalp hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002816<a name=\"hpo-HP.580002816\"> </a></td><td>Genu recurvatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0005116<a name=\"hpo-HP.580005116\"> </a></td><td>Arterial tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0007957<a name=\"hpo-HP.580007957\"> </a></td><td>Corneal opacity</td></tr><tr><td style=\"white-space:nowrap\">HP:0008070<a name=\"hpo-HP.580008070\"> </a></td><td>Sparse hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0009623<a name=\"hpo-HP.580009623\"> </a></td><td>Proximal placement of thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0010055<a name=\"hpo-HP.580010055\"> </a></td><td>Broad hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0011318<a name=\"hpo-HP.580011318\"> </a></td><td>Bicoronal synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011968<a name=\"hpo-HP.580011968\"> </a></td><td>Feeding difficulties</td></tr><tr><td style=\"white-space:nowrap\">HP:0200067<a name=\"hpo-HP.580200067\"> </a></td><td>Recurrent spontaneous abortion</td></tr><tr><td style=\"white-space:nowrap\">HP:0011819<a name=\"hpo-HP.580011819\"> </a></td><td>Submucous cleft soft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000268<a name=\"hpo-HP.580000268\"> </a></td><td>Dolichocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0003302<a name=\"hpo-HP.580003302\"> </a></td><td>Spondylolisthesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000582<a name=\"hpo-HP.580000582\"> </a></td><td>Upslanted palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000952<a name=\"hpo-HP.580000952\"> </a></td><td>Jaundice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001298<a name=\"hpo-HP.580001298\"> </a></td><td>Encephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001396<a name=\"hpo-HP.580001396\"> </a></td><td>Cholestasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002059<a name=\"hpo-HP.580002059\"> </a></td><td>Cerebral atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002171<a name=\"hpo-HP.580002171\"> </a></td><td>Gliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002240<a name=\"hpo-HP.580002240\"> </a></td><td>Hepatomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002353<a name=\"hpo-HP.580002353\"> </a></td><td>EEG abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0002446<a name=\"hpo-HP.580002446\"> </a></td><td>Astrocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003287<a name=\"hpo-HP.580003287\"> </a></td><td>Abnormality of mitochondrial metabolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011449<a name=\"hpo-HP.580011449\"> </a></td><td>Knee clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012852<a name=\"hpo-HP.580012852\"> </a></td><td>Hepatic bridging fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100626<a name=\"hpo-HP.580100626\"> </a></td><td>Chronic hepatic failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000385<a name=\"hpo-HP.580000385\"> </a></td><td>Small earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0009748<a name=\"hpo-HP.580009748\"> </a></td><td>Large earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000157<a name=\"hpo-HP.580000157\"> </a></td><td>Abnormality of the tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0000172<a name=\"hpo-HP.580000172\"> </a></td><td>Abnormality of the uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000174<a name=\"hpo-HP.580000174\"> </a></td><td>Abnormal palate morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000306<a name=\"hpo-HP.580000306\"> </a></td><td>Abnormality of the chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0004408<a name=\"hpo-HP.580004408\"> </a></td><td>Abnormality of the sense of smell</td></tr><tr><td style=\"white-space:nowrap\">HP:0009912<a name=\"hpo-HP.580009912\"> </a></td><td>Abnormality of the tragus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000537<a name=\"hpo-HP.580000537\"> </a></td><td>Epicanthus inversus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000565<a name=\"hpo-HP.580000565\"> </a></td><td>Esotropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000752<a name=\"hpo-HP.580000752\"> </a></td><td>Hyperactivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003186<a name=\"hpo-HP.580003186\"> </a></td><td>Inverted nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0012503<a name=\"hpo-HP.580012503\"> </a></td><td>Abnormality of the pituitary gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0100710<a name=\"hpo-HP.580100710\"> </a></td><td>Impulsivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000357<a name=\"hpo-HP.580000357\"> </a></td><td>Abnormal location of ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0000820<a name=\"hpo-HP.580000820\"> </a></td><td>Abnormality of the thyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000828<a name=\"hpo-HP.580000828\"> </a></td><td>Abnormality of the parathyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000834<a name=\"hpo-HP.580000834\"> </a></td><td>Abnormality of the adrenal glands</td></tr><tr><td style=\"white-space:nowrap\">HP:0012093<a name=\"hpo-HP.580012093\"> </a></td><td>Abnormality of endocrine pancreas physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000269<a name=\"hpo-HP.580000269\"> </a></td><td>Prominent occiput</td></tr><tr><td style=\"white-space:nowrap\">HP:0000535<a name=\"hpo-HP.580000535\"> </a></td><td>Sparse and thin eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000639<a name=\"hpo-HP.580000639\"> </a></td><td>Nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000718<a name=\"hpo-HP.580000718\"> </a></td><td>Aggressive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000957<a name=\"hpo-HP.580000957\"> </a></td><td>Cafe-au-lait spot</td></tr><tr><td style=\"white-space:nowrap\">HP:0000256<a name=\"hpo-HP.580000256\"> </a></td><td>Macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000750<a name=\"hpo-HP.580000750\"> </a></td><td>Delayed speech and language development</td></tr><tr><td style=\"white-space:nowrap\">HP:0000963<a name=\"hpo-HP.580000963\"> </a></td><td>Thin skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001260<a name=\"hpo-HP.580001260\"> </a></td><td>Dysarthria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002194<a name=\"hpo-HP.580002194\"> </a></td><td>Delayed gross motor development</td></tr><tr><td style=\"white-space:nowrap\">HP:0003196<a name=\"hpo-HP.580003196\"> </a></td><td>Short nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0001155<a name=\"hpo-HP.580001155\"> </a></td><td>Abnormality of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0100022<a name=\"hpo-HP.580100022\"> </a></td><td>Abnormality of movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010862<a name=\"hpo-HP.580010862\"> </a></td><td>Delayed fine motor development</td></tr><tr><td style=\"white-space:nowrap\">HP:0000343<a name=\"hpo-HP.580000343\"> </a></td><td>Long philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000717<a name=\"hpo-HP.580000717\"> </a></td><td>Autism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001883<a name=\"hpo-HP.580001883\"> </a></td><td>Talipes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002553<a name=\"hpo-HP.580002553\"> </a></td><td>Highly arched eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0007488<a name=\"hpo-HP.580007488\"> </a></td><td>Diffuse skin atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000822<a name=\"hpo-HP.580000822\"> </a></td><td>Hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001278<a name=\"hpo-HP.580001278\"> </a></td><td>Orthostatic hypotension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001944<a name=\"hpo-HP.580001944\"> </a></td><td>Dehydration</td></tr><tr><td style=\"white-space:nowrap\">HP:0001945<a name=\"hpo-HP.580001945\"> </a></td><td>Fever</td></tr><tr><td style=\"white-space:nowrap\">HP:0002019<a name=\"hpo-HP.580002019\"> </a></td><td>Constipation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002020<a name=\"hpo-HP.580002020\"> </a></td><td>Gastroesophageal reflux</td></tr><tr><td style=\"white-space:nowrap\">HP:0002027<a name=\"hpo-HP.580002027\"> </a></td><td>Abdominal pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0002718<a name=\"hpo-HP.580002718\"> </a></td><td>Recurrent bacterial infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0002841<a name=\"hpo-HP.580002841\"> </a></td><td>Recurrent fungal infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0004395<a name=\"hpo-HP.580004395\"> </a></td><td>Malnutrition</td></tr><tr><td style=\"white-space:nowrap\">HP:0009830<a name=\"hpo-HP.580009830\"> </a></td><td>Peripheral neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000126<a name=\"hpo-HP.580000126\"> </a></td><td>Hydronephrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000519<a name=\"hpo-HP.580000519\"> </a></td><td>Developmental cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000648<a name=\"hpo-HP.580000648\"> </a></td><td>Optic atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001053<a name=\"hpo-HP.580001053\"> </a></td><td>Hypopigmented skin patches</td></tr><tr><td style=\"white-space:nowrap\">HP:0001087<a name=\"hpo-HP.580001087\"> </a></td><td>Developmental glaucoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0002119<a name=\"hpo-HP.580002119\"> </a></td><td>Ventriculomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002280<a name=\"hpo-HP.580002280\"> </a></td><td>Enlarged cisterna magna</td></tr><tr><td style=\"white-space:nowrap\">HP:0003298<a name=\"hpo-HP.580003298\"> </a></td><td>Spina bifida occulta</td></tr><tr><td style=\"white-space:nowrap\">HP:0004467<a name=\"hpo-HP.580004467\"> </a></td><td>Preauricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0008511<a name=\"hpo-HP.580008511\"> </a></td><td>Central posterior corneal opacity</td></tr><tr><td style=\"white-space:nowrap\">HP:0010780<a name=\"hpo-HP.580010780\"> </a></td><td>Hyperacusis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030048<a name=\"hpo-HP.580030048\"> </a></td><td>Colpocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0100335<a name=\"hpo-HP.580100335\"> </a></td><td>Non-midline cleft lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000525<a name=\"hpo-HP.580000525\"> </a></td><td>Abnormality iris morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002719<a name=\"hpo-HP.580002719\"> </a></td><td>Recurrent infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0000153<a name=\"hpo-HP.580000153\"> </a></td><td>Abnormality of the mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001903<a name=\"hpo-HP.580001903\"> </a></td><td>Anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002094<a name=\"hpo-HP.580002094\"> </a></td><td>Dyspnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002206<a name=\"hpo-HP.580002206\"> </a></td><td>Pulmonary fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002789<a name=\"hpo-HP.580002789\"> </a></td><td>Tachypnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002793<a name=\"hpo-HP.580002793\"> </a></td><td>Abnormal pattern of respiration</td></tr><tr><td style=\"white-space:nowrap\">HP:0003565<a name=\"hpo-HP.580003565\"> </a></td><td>Elevated erythrocyte sedimentation rate</td></tr><tr><td style=\"white-space:nowrap\">HP:0006517<a name=\"hpo-HP.580006517\"> </a></td><td>Intraalveolar phospholipid accumulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0006530<a name=\"hpo-HP.580006530\"> </a></td><td>Interstitial pulmonary abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0100759<a name=\"hpo-HP.580100759\"> </a></td><td>Clubbing of fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0002103<a name=\"hpo-HP.580002103\"> </a></td><td>Abnormal pleura morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001596<a name=\"hpo-HP.580001596\"> </a></td><td>Alopecia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001882<a name=\"hpo-HP.580001882\"> </a></td><td>Leukopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002013<a name=\"hpo-HP.580002013\"> </a></td><td>Vomiting</td></tr><tr><td style=\"white-space:nowrap\">HP:0002028<a name=\"hpo-HP.580002028\"> </a></td><td>Chronic diarrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002573<a name=\"hpo-HP.580002573\"> </a></td><td>Hematochezia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002960<a name=\"hpo-HP.580002960\"> </a></td><td>Autoimmunity</td></tr><tr><td style=\"white-space:nowrap\">HP:0005387<a name=\"hpo-HP.580005387\"> </a></td><td>Combined immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0011109<a name=\"hpo-HP.580011109\"> </a></td><td>Chronic sinusitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004429<a name=\"hpo-HP.580004429\"> </a></td><td>Recurrent viral infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0000280<a name=\"hpo-HP.580000280\"> </a></td><td>Coarse facial features</td></tr><tr><td style=\"white-space:nowrap\">HP:0000294<a name=\"hpo-HP.580000294\"> </a></td><td>Low anterior hairline</td></tr><tr><td style=\"white-space:nowrap\">HP:0000577<a name=\"hpo-HP.580000577\"> </a></td><td>Exotropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001873<a name=\"hpo-HP.580001873\"> </a></td><td>Thrombocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002011<a name=\"hpo-HP.580002011\"> </a></td><td>Morphological central nervous system abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0006610<a name=\"hpo-HP.580006610\"> </a></td><td>Wide intermamillary distance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011231<a name=\"hpo-HP.580011231\"> </a></td><td>Prominent eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0012718<a name=\"hpo-HP.580012718\"> </a></td><td>Morphological abnormality of the gastrointestinal tract</td></tr><tr><td style=\"white-space:nowrap\">HP:0002024<a name=\"hpo-HP.580002024\"> </a></td><td>Malabsorption</td></tr><tr><td style=\"white-space:nowrap\">HP:0001394<a name=\"hpo-HP.580001394\"> </a></td><td>Cirrhosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001414<a name=\"hpo-HP.580001414\"> </a></td><td>Microvesicular hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001403<a name=\"hpo-HP.580001403\"> </a></td><td>Macrovesicular hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001410<a name=\"hpo-HP.580001410\"> </a></td><td>Decreased liver function</td></tr><tr><td style=\"white-space:nowrap\">HP:0001409<a name=\"hpo-HP.580001409\"> </a></td><td>Portal hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001744<a name=\"hpo-HP.580001744\"> </a></td><td>Splenomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0003394<a name=\"hpo-HP.580003394\"> </a></td><td>Muscle spasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003750<a name=\"hpo-HP.580003750\"> </a></td><td>Increased muscle fatiguability</td></tr><tr><td style=\"white-space:nowrap\">HP:0002123<a name=\"hpo-HP.580002123\"> </a></td><td>Generalized myoclonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0002219<a name=\"hpo-HP.580002219\"> </a></td><td>Facial hypertrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000831<a name=\"hpo-HP.580000831\"> </a></td><td>Insulin-resistant diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001891<a name=\"hpo-HP.580001891\"> </a></td><td>Iron deficiency anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001264<a name=\"hpo-HP.580001264\"> </a></td><td>Spastic diplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002313<a name=\"hpo-HP.580002313\"> </a></td><td>Spastic paraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001347<a name=\"hpo-HP.580001347\"> </a></td><td>Hyperreflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002460<a name=\"hpo-HP.580002460\"> </a></td><td>Distal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000763<a name=\"hpo-HP.580000763\"> </a></td><td>Sensory neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001268<a name=\"hpo-HP.580001268\"> </a></td><td>Mental deterioration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002169<a name=\"hpo-HP.580002169\"> </a></td><td>Clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001332<a name=\"hpo-HP.580001332\"> </a></td><td>Dystonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100716<a name=\"hpo-HP.580100716\"> </a></td><td>Self-injurious behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000602<a name=\"hpo-HP.580000602\"> </a></td><td>Ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001251<a name=\"hpo-HP.580001251\"> </a></td><td>Ataxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000776<a name=\"hpo-HP.580000776\"> </a></td><td>Congenital diaphragmatic hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000410<a name=\"hpo-HP.580000410\"> </a></td><td>Mixed hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000510<a name=\"hpo-HP.580000510\"> </a></td><td>Rod-cone dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0004437<a name=\"hpo-HP.580004437\"> </a></td><td>Cranial hyperostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011001<a name=\"hpo-HP.580011001\"> </a></td><td>Increased bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0000956<a name=\"hpo-HP.580000956\"> </a></td><td>Acanthosis nigricans</td></tr><tr><td style=\"white-space:nowrap\">HP:0000958<a name=\"hpo-HP.580000958\"> </a></td><td>Dry skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000580<a name=\"hpo-HP.580000580\"> </a></td><td>Pigmentary retinopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000649<a name=\"hpo-HP.580000649\"> </a></td><td>Abnormality of visual evoked potentials</td></tr><tr><td style=\"white-space:nowrap\">HP:0000657<a name=\"hpo-HP.580000657\"> </a></td><td>Oculomotor apraxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000479<a name=\"hpo-HP.580000479\"> </a></td><td>Abnormal retinal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001317<a name=\"hpo-HP.580001317\"> </a></td><td>Abnormal cerebellum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001533<a name=\"hpo-HP.580001533\"> </a></td><td>Slender build</td></tr><tr><td style=\"white-space:nowrap\">HP:0001629<a name=\"hpo-HP.580001629\"> </a></td><td>Ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0000703<a name=\"hpo-HP.580000703\"> </a></td><td>Dentinogenesis imperfecta</td></tr><tr><td style=\"white-space:nowrap\">HP:0000914<a name=\"hpo-HP.580000914\"> </a></td><td>Shield chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0001500<a name=\"hpo-HP.580001500\"> </a></td><td>Broad finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0003086<a name=\"hpo-HP.580003086\"> </a></td><td>Acromesomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003416<a name=\"hpo-HP.580003416\"> </a></td><td>Spinal canal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002815<a name=\"hpo-HP.580002815\"> </a></td><td>Abnormality of the knee</td></tr><tr><td style=\"white-space:nowrap\">HP:0002992<a name=\"hpo-HP.580002992\"> </a></td><td>Abnormality of tibia morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001639<a name=\"hpo-HP.580001639\"> </a></td><td>Hypertrophic cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003236<a name=\"hpo-HP.580003236\"> </a></td><td>Elevated serum creatine kinase</td></tr><tr><td style=\"white-space:nowrap\">HP:0001369<a name=\"hpo-HP.580001369\"> </a></td><td>Arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003560<a name=\"hpo-HP.580003560\"> </a></td><td>Muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003974<a name=\"hpo-HP.580003974\"> </a></td><td>Absent radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0002818<a name=\"hpo-HP.580002818\"> </a></td><td>Abnormality of the radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0001561<a name=\"hpo-HP.580001561\"> </a></td><td>Polyhydramnios</td></tr><tr><td style=\"white-space:nowrap\">HP:0002299<a name=\"hpo-HP.580002299\"> </a></td><td>Brittle hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002208<a name=\"hpo-HP.580002208\"> </a></td><td>Coarse hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002213<a name=\"hpo-HP.580002213\"> </a></td><td>Fine hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000522<a name=\"hpo-HP.580000522\"> </a></td><td>Alacrima</td></tr><tr><td style=\"white-space:nowrap\">HP:0100704<a name=\"hpo-HP.580100704\"> </a></td><td>Cerebral visual impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0012713<a name=\"hpo-HP.580012713\"> </a></td><td>Moderate hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002307<a name=\"hpo-HP.580002307\"> </a></td><td>Drooling</td></tr><tr><td style=\"white-space:nowrap\">HP:0002714<a name=\"hpo-HP.580002714\"> </a></td><td>Downturned corners of mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000191<a name=\"hpo-HP.580000191\"> </a></td><td>Accessory oral frenulum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000158<a name=\"hpo-HP.580000158\"> </a></td><td>Macroglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012020<a name=\"hpo-HP.580012020\"> </a></td><td>Right aortic arch</td></tr><tr><td style=\"white-space:nowrap\">HP:0002104<a name=\"hpo-HP.580002104\"> </a></td><td>Apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0000598<a name=\"hpo-HP.580000598\"> </a></td><td>Abnormality of the ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0007874<a name=\"hpo-HP.580007874\"> </a></td><td>Almond-shaped palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0010804<a name=\"hpo-HP.580010804\"> </a></td><td>Tented upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000885<a name=\"hpo-HP.580000885\"> </a></td><td>Broad ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000768<a name=\"hpo-HP.580000768\"> </a></td><td>Pectus carinatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001680<a name=\"hpo-HP.580001680\"> </a></td><td>Coarctation of aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0000687<a name=\"hpo-HP.580000687\"> </a></td><td>Widely spaced teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000047<a name=\"hpo-HP.580000047\"> </a></td><td>Hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0001943<a name=\"hpo-HP.580001943\"> </a></td><td>Hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012369<a name=\"hpo-HP.580012369\"> </a></td><td>Abnormality of malar bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0009900<a name=\"hpo-HP.580009900\"> </a></td><td>Unilateral deafness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000023<a name=\"hpo-HP.580000023\"> </a></td><td>Inguinal hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000074<a name=\"hpo-HP.580000074\"> </a></td><td>Ureteropelvic junction obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001800<a name=\"hpo-HP.580001800\"> </a></td><td>Hypoplastic toenails</td></tr><tr><td style=\"white-space:nowrap\">HP:0001804<a name=\"hpo-HP.580001804\"> </a></td><td>Hypoplastic fingernail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002949<a name=\"hpo-HP.580002949\"> </a></td><td>Fused cervical vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0008050<a name=\"hpo-HP.580008050\"> </a></td><td>Abnormality of the palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0008577<a name=\"hpo-HP.580008577\"> </a></td><td>Underfolded helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0008589<a name=\"hpo-HP.580008589\"> </a></td><td>Hypoplastic helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0010863<a name=\"hpo-HP.580010863\"> </a></td><td>Receptive language delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0002282<a name=\"hpo-HP.580002282\"> </a></td><td>Gray matter heterotopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002085<a name=\"hpo-HP.580002085\"> </a></td><td>Occipital encephalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0001057<a name=\"hpo-HP.580001057\"> </a></td><td>Aplasia cutis congenita</td></tr><tr><td style=\"white-space:nowrap\">HP:0000211<a name=\"hpo-HP.580000211\"> </a></td><td>Trismus</td></tr><tr><td style=\"white-space:nowrap\">HP:0008422<a name=\"hpo-HP.580008422\"> </a></td><td>Vertebral wedging</td></tr><tr><td style=\"white-space:nowrap\">HP:0003170<a name=\"hpo-HP.580003170\"> </a></td><td>Abnormality of the acetabulum</td></tr><tr><td style=\"white-space:nowrap\">HP:0003272<a name=\"hpo-HP.580003272\"> </a></td><td>Abnormality of the hip bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0003028<a name=\"hpo-HP.580003028\"> </a></td><td>Abnormality of the ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0003301<a name=\"hpo-HP.580003301\"> </a></td><td>Irregular vertebral endplates</td></tr><tr><td style=\"white-space:nowrap\">HP:0010508<a name=\"hpo-HP.580010508\"> </a></td><td>Metatarsus valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0009811<a name=\"hpo-HP.580009811\"> </a></td><td>Abnormality of the elbow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000736<a name=\"hpo-HP.580000736\"> </a></td><td>Short attention span</td></tr><tr><td style=\"white-space:nowrap\">HP:0002912<a name=\"hpo-HP.580002912\"> </a></td><td>Methylmalonic acidemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001941<a name=\"hpo-HP.580001941\"> </a></td><td>Acidosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001992<a name=\"hpo-HP.580001992\"> </a></td><td>Organic aciduria</td></tr><tr><td style=\"white-space:nowrap\">HP:0009027<a name=\"hpo-HP.580009027\"> </a></td><td>Foot dorsiflexor weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002063<a name=\"hpo-HP.580002063\"> </a></td><td>Rigidity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000384<a name=\"hpo-HP.580000384\"> </a></td><td>Preauricular skin tag</td></tr><tr><td style=\"white-space:nowrap\">HP:0200046<a name=\"hpo-HP.580200046\"> </a></td><td>Cat cry</td></tr><tr><td style=\"white-space:nowrap\">HP:0001357<a name=\"hpo-HP.580001357\"> </a></td><td>Plagiocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000670<a name=\"hpo-HP.580000670\"> </a></td><td>Carious teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0011090<a name=\"hpo-HP.580011090\"> </a></td><td>Fused teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0012810<a name=\"hpo-HP.580012810\"> </a></td><td>Wide nasal base</td></tr><tr><td style=\"white-space:nowrap\">HP:0010296<a name=\"hpo-HP.580010296\"> </a></td><td>Ankyloglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001636<a name=\"hpo-HP.580001636\"> </a></td><td>Tetralogy of Fallot</td></tr><tr><td style=\"white-space:nowrap\">HP:0001305<a name=\"hpo-HP.580001305\"> </a></td><td>Dandy-Walker malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000238<a name=\"hpo-HP.580000238\"> </a></td><td>Hydrocephalus</td></tr><tr><td style=\"white-space:nowrap\">HP:0005469<a name=\"hpo-HP.580005469\"> </a></td><td>Flat occiput</td></tr><tr><td style=\"white-space:nowrap\">HP:0000270<a name=\"hpo-HP.580000270\"> </a></td><td>Delayed cranial suture closure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000239<a name=\"hpo-HP.580000239\"> </a></td><td>Large fontanelles</td></tr><tr><td style=\"white-space:nowrap\">HP:0010537<a name=\"hpo-HP.580010537\"> </a></td><td>Wide cranial sutures</td></tr><tr><td style=\"white-space:nowrap\">HP:0002217<a name=\"hpo-HP.580002217\"> </a></td><td>Slow-growing hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000587<a name=\"hpo-HP.580000587\"> </a></td><td>Abnormality of the optic nerve</td></tr><tr><td style=\"white-space:nowrap\">HP:0005989<a name=\"hpo-HP.580005989\"> </a></td><td>Redundant neck skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010775<a name=\"hpo-HP.580010775\"> </a></td><td>Vascular ring</td></tr><tr><td style=\"white-space:nowrap\">HP:0002779<a name=\"hpo-HP.580002779\"> </a></td><td>Tracheomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002827<a name=\"hpo-HP.580002827\"> </a></td><td>Hip dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001302<a name=\"hpo-HP.580001302\"> </a></td><td>Pachygyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0007362<a name=\"hpo-HP.580007362\"> </a></td><td>Aplasia/Hypoplasia of the brainstem</td></tr><tr><td style=\"white-space:nowrap\">HP:0001558<a name=\"hpo-HP.580001558\"> </a></td><td>Decreased fetal movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010878<a name=\"hpo-HP.580010878\"> </a></td><td>Fetal cystic hygroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0011398<a name=\"hpo-HP.580011398\"> </a></td><td>Central hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002071<a name=\"hpo-HP.580002071\"> </a></td><td>Abnormality of extrapyramidal motor function</td></tr><tr><td style=\"white-space:nowrap\">HP:0000826<a name=\"hpo-HP.580000826\"> </a></td><td>Precocious puberty</td></tr><tr><td style=\"white-space:nowrap\">HP:0000014<a name=\"hpo-HP.580000014\"> </a></td><td>Abnormality of the bladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0005037<a name=\"hpo-HP.580005037\"> </a></td><td>Proximal radio-ulnar synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100543<a name=\"hpo-HP.580100543\"> </a></td><td>Cognitive impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000481<a name=\"hpo-HP.580000481\"> </a></td><td>Abnormal cornea morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000076<a name=\"hpo-HP.580000076\"> </a></td><td>Vesicoureteral reflux</td></tr><tr><td style=\"white-space:nowrap\">HP:0000297<a name=\"hpo-HP.580000297\"> </a></td><td>Facial hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000391<a name=\"hpo-HP.580000391\"> </a></td><td>Thickened helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0001162<a name=\"hpo-HP.580001162\"> </a></td><td>Postaxial hand polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001385<a name=\"hpo-HP.580001385\"> </a></td><td>Hip dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002342<a name=\"hpo-HP.580002342\"> </a></td><td>Intellectual disability, moderate</td></tr><tr><td style=\"white-space:nowrap\">HP:0003191<a name=\"hpo-HP.580003191\"> </a></td><td>Cleft ala nasi</td></tr><tr><td style=\"white-space:nowrap\">HP:0009765<a name=\"hpo-HP.580009765\"> </a></td><td>Low hanging columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0010297<a name=\"hpo-HP.580010297\"> </a></td><td>Bifid tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0011330<a name=\"hpo-HP.580011330\"> </a></td><td>Metopic synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012804<a name=\"hpo-HP.580012804\"> </a></td><td>Corneal ulceration</td></tr><tr><td style=\"white-space:nowrap\">HP:0010485<a name=\"hpo-HP.580010485\"> </a></td><td>Hyperextensibility at elbow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000609<a name=\"hpo-HP.580000609\"> </a></td><td>Optic nerve hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001176<a name=\"hpo-HP.580001176\"> </a></td><td>Large hands</td></tr><tr><td style=\"white-space:nowrap\">HP:0004233<a name=\"hpo-HP.580004233\"> </a></td><td>Advanced ossification of carpal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0100842<a name=\"hpo-HP.580100842\"> </a></td><td>Septo-optic dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002034<a name=\"hpo-HP.580002034\"> </a></td><td>Abnormality of the rectum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002283<a name=\"hpo-HP.580002283\"> </a></td><td>Global brain atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003115<a name=\"hpo-HP.580003115\"> </a></td><td>Abnormal EKG</td></tr><tr><td style=\"white-space:nowrap\">HP:0002577<a name=\"hpo-HP.580002577\"> </a></td><td>Abnormal stomach morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002539<a name=\"hpo-HP.580002539\"> </a></td><td>Cortical dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006818<a name=\"hpo-HP.580006818\"> </a></td><td>4-layered lissencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000593<a name=\"hpo-HP.580000593\"> </a></td><td>Abnormal anterior chamber morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000179<a name=\"hpo-HP.580000179\"> </a></td><td>Thick lower lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002002<a name=\"hpo-HP.580002002\"> </a></td><td>Deep philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0009931<a name=\"hpo-HP.580009931\"> </a></td><td>Enlarged naris</td></tr><tr><td style=\"white-space:nowrap\">HP:0002948<a name=\"hpo-HP.580002948\"> </a></td><td>Vertebral fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002937<a name=\"hpo-HP.580002937\"> </a></td><td>Hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0002308<a name=\"hpo-HP.580002308\"> </a></td><td>Arnold-Chiari malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011320<a name=\"hpo-HP.580011320\"> </a></td><td>Unilambdoid synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002781<a name=\"hpo-HP.580002781\"> </a></td><td>Upper airway obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001363<a name=\"hpo-HP.580001363\"> </a></td><td>Craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000204<a name=\"hpo-HP.580000204\"> </a></td><td>Cleft upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001738<a name=\"hpo-HP.580001738\"> </a></td><td>Exocrine pancreatic insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002823<a name=\"hpo-HP.580002823\"> </a></td><td>Abnormality of femur morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000823<a name=\"hpo-HP.580000823\"> </a></td><td>Delayed puberty</td></tr><tr><td style=\"white-space:nowrap\">HP:0100279<a name=\"hpo-HP.580100279\"> </a></td><td>Ulcerative colitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003834<a name=\"hpo-HP.580003834\"> </a></td><td>Shoulder dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001065<a name=\"hpo-HP.580001065\"> </a></td><td>Striae distensae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000448<a name=\"hpo-HP.580000448\"> </a></td><td>Prominent nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0000554<a name=\"hpo-HP.580000554\"> </a></td><td>Uveitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001006<a name=\"hpo-HP.580001006\"> </a></td><td>obsolete Hypotrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000501<a name=\"hpo-HP.580000501\"> </a></td><td>Glaucoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000262<a name=\"hpo-HP.580000262\"> </a></td><td>Turricephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000729<a name=\"hpo-HP.580000729\"> </a></td><td>Autistic behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0010800<a name=\"hpo-HP.580010800\"> </a></td><td>Absent cupid's bow</td></tr><tr><td style=\"white-space:nowrap\">HP:0010808<a name=\"hpo-HP.580010808\"> </a></td><td>Protruding tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0009927<a name=\"hpo-HP.580009927\"> </a></td><td>Aplasia of the nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0100539<a name=\"hpo-HP.580100539\"> </a></td><td>Periorbital edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000629<a name=\"hpo-HP.580000629\"> </a></td><td>Periorbital fullness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000178<a name=\"hpo-HP.580000178\"> </a></td><td>Abnormality of lower lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000168<a name=\"hpo-HP.580000168\"> </a></td><td>Abnormality of the gingiva</td></tr><tr><td style=\"white-space:nowrap\">HP:0001022<a name=\"hpo-HP.580001022\"> </a></td><td>Albinism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000177<a name=\"hpo-HP.580000177\"> </a></td><td>Abnormality of upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001337<a name=\"hpo-HP.580001337\"> </a></td><td>Tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002135<a name=\"hpo-HP.580002135\"> </a></td><td>Basal ganglia calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0002352<a name=\"hpo-HP.580002352\"> </a></td><td>Leukoencephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002514<a name=\"hpo-HP.580002514\"> </a></td><td>Cerebral calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0010576<a name=\"hpo-HP.580010576\"> </a></td><td>Intracranial cystic lesion</td></tr><tr><td style=\"white-space:nowrap\">HP:0001622<a name=\"hpo-HP.580001622\"> </a></td><td>Premature birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002415<a name=\"hpo-HP.580002415\"> </a></td><td>Leukodystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001320<a name=\"hpo-HP.580001320\"> </a></td><td>Cerebellar vermis hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001773<a name=\"hpo-HP.580001773\"> </a></td><td>Short foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0002750<a name=\"hpo-HP.580002750\"> </a></td><td>Delayed skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004415<a name=\"hpo-HP.580004415\"> </a></td><td>Pulmonary artery stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012741<a name=\"hpo-HP.580012741\"> </a></td><td>Unilateral cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000036<a name=\"hpo-HP.580000036\"> </a></td><td>Abnormality of the penis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002408<a name=\"hpo-HP.580002408\"> </a></td><td>Cerebral arteriovenous malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0007457<a name=\"hpo-HP.580007457\"> </a></td><td>Prominent veins on trunk</td></tr><tr><td style=\"white-space:nowrap\">HP:0000378<a name=\"hpo-HP.580000378\"> </a></td><td>Cupped ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000396<a name=\"hpo-HP.580000396\"> </a></td><td>Overfolded helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000035<a name=\"hpo-HP.580000035\"> </a></td><td>Abnormal testis morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009895<a name=\"hpo-HP.580009895\"> </a></td><td>Abnormality of the crus of the helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000034<a name=\"hpo-HP.580000034\"> </a></td><td>Hydrocele testis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000722<a name=\"hpo-HP.580000722\"> </a></td><td>Obsessive-compulsive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000845<a name=\"hpo-HP.580000845\"> </a></td><td>Growth hormone excess</td></tr><tr><td style=\"white-space:nowrap\">HP:0100829<a name=\"hpo-HP.580100829\"> </a></td><td>Galactorrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001578<a name=\"hpo-HP.580001578\"> </a></td><td>Increased circulating cortisol level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000786<a name=\"hpo-HP.580000786\"> </a></td><td>Primary amenorrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001701<a name=\"hpo-HP.580001701\"> </a></td><td>Pericarditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002076<a name=\"hpo-HP.580002076\"> </a></td><td>Migraine</td></tr><tr><td style=\"white-space:nowrap\">HP:0004755<a name=\"hpo-HP.580004755\"> </a></td><td>Supraventricular tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010522<a name=\"hpo-HP.580010522\"> </a></td><td>Dyslexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004313<a name=\"hpo-HP.580004313\"> </a></td><td>Decreased circulating antibody level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000011<a name=\"hpo-HP.580000011\"> </a></td><td>Neurogenic bladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000641<a name=\"hpo-HP.580000641\"> </a></td><td>Dysmetric saccades</td></tr><tr><td style=\"white-space:nowrap\">HP:0007772<a name=\"hpo-HP.580007772\"> </a></td><td>Impaired smooth pursuit</td></tr><tr><td style=\"white-space:nowrap\">HP:0001583<a name=\"hpo-HP.580001583\"> </a></td><td>Rotary nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010544<a name=\"hpo-HP.580010544\"> </a></td><td>Vertical nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012735<a name=\"hpo-HP.580012735\"> </a></td><td>Cough</td></tr><tr><td style=\"white-space:nowrap\">HP:0002075<a name=\"hpo-HP.580002075\"> </a></td><td>Dysdiadochokinesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0007256<a name=\"hpo-HP.580007256\"> </a></td><td>Abnormal pyramidal sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0001257<a name=\"hpo-HP.580001257\"> </a></td><td>Spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002321<a name=\"hpo-HP.580002321\"> </a></td><td>Vertigo</td></tr><tr><td style=\"white-space:nowrap\">HP:0002384<a name=\"hpo-HP.580002384\"> </a></td><td>Focal impaired awareness seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011376<a name=\"hpo-HP.580011376\"> </a></td><td>Morphological abnormality of the vestibule of the inner ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0002326<a name=\"hpo-HP.580002326\"> </a></td><td>Transient ischemic attack</td></tr><tr><td style=\"white-space:nowrap\">HP:0005584<a name=\"hpo-HP.580005584\"> </a></td><td>Renal cell carcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0003124<a name=\"hpo-HP.580003124\"> </a></td><td>Hypercholesterolemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003002<a name=\"hpo-HP.580003002\"> </a></td><td>Breast carcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0004953<a name=\"hpo-HP.580004953\"> </a></td><td>obsolete Dilatation of abdominal aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0004944<a name=\"hpo-HP.580004944\"> </a></td><td>Dilatation of the cerebral artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0000100<a name=\"hpo-HP.580000100\"> </a></td><td>Nephrotic syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002783<a name=\"hpo-HP.580002783\"> </a></td><td>Recurrent lower respiratory tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0003470<a name=\"hpo-HP.580003470\"> </a></td><td>Paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006597<a name=\"hpo-HP.580006597\"> </a></td><td>Diaphragmatic paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008151<a name=\"hpo-HP.580008151\"> </a></td><td>Prolonged prothrombin time</td></tr><tr><td style=\"white-space:nowrap\">HP:0010628<a name=\"hpo-HP.580010628\"> </a></td><td>Facial palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011892<a name=\"hpo-HP.580011892\"> </a></td><td>Low levels of vitamin K</td></tr><tr><td style=\"white-space:nowrap\">HP:0001075<a name=\"hpo-HP.580001075\"> </a></td><td>Atrophic scars</td></tr><tr><td style=\"white-space:nowrap\">HP:0001816<a name=\"hpo-HP.580001816\"> </a></td><td>Thin nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002216<a name=\"hpo-HP.580002216\"> </a></td><td>Premature graying of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0003401<a name=\"hpo-HP.580003401\"> </a></td><td>Paresthesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100134<a name=\"hpo-HP.580100134\"> </a></td><td>Abnormality of the axillary hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0100797<a name=\"hpo-HP.580100797\"> </a></td><td>Toenail dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010461<a name=\"hpo-HP.580010461\"> </a></td><td>Abnormality of the male genitalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000044<a name=\"hpo-HP.580000044\"> </a></td><td>Hypogonadotropic hypogonadism</td></tr><tr><td style=\"white-space:nowrap\">HP:0100568<a name=\"hpo-HP.580100568\"> </a></td><td>Neoplasm of the endocrine system</td></tr><tr><td style=\"white-space:nowrap\">HP:0001646<a name=\"hpo-HP.580001646\"> </a></td><td>Abnormal aortic valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000813<a name=\"hpo-HP.580000813\"> </a></td><td>Bicornuate uterus</td></tr><tr><td style=\"white-space:nowrap\">HP:0004380<a name=\"hpo-HP.580004380\"> </a></td><td>Aortic valve calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0001650<a name=\"hpo-HP.580001650\"> </a></td><td>Aortic valve stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000073<a name=\"hpo-HP.580000073\"> </a></td><td>Ureteral duplication</td></tr><tr><td style=\"white-space:nowrap\">HP:0100651<a name=\"hpo-HP.580100651\"> </a></td><td>Type I diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000819<a name=\"hpo-HP.580000819\"> </a></td><td>Diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000573<a name=\"hpo-HP.580000573\"> </a></td><td>Retinal hemorrhage</td></tr><tr><td style=\"white-space:nowrap\">HP:0005264<a name=\"hpo-HP.580005264\"> </a></td><td>Abnormality of the gallbladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000475<a name=\"hpo-HP.580000475\"> </a></td><td>Broad neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000089<a name=\"hpo-HP.580000089\"> </a></td><td>Renal hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000921<a name=\"hpo-HP.580000921\"> </a></td><td>Missing ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0001789<a name=\"hpo-HP.580001789\"> </a></td><td>Hydrops fetalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002089<a name=\"hpo-HP.580002089\"> </a></td><td>Pulmonary hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003422<a name=\"hpo-HP.580003422\"> </a></td><td>Vertebral segmentation defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002323<a name=\"hpo-HP.580002323\"> </a></td><td>Anencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000341<a name=\"hpo-HP.580000341\"> </a></td><td>Narrow forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0002869<a name=\"hpo-HP.580002869\"> </a></td><td>Flared iliac wings</td></tr><tr><td style=\"white-space:nowrap\">HP:0003100<a name=\"hpo-HP.580003100\"> </a></td><td>Slender long bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0003275<a name=\"hpo-HP.580003275\"> </a></td><td>Narrow pelvis bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0009891<a name=\"hpo-HP.580009891\"> </a></td><td>Underdeveloped supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0011039<a name=\"hpo-HP.580011039\"> </a></td><td>Abnormality of the helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0008572<a name=\"hpo-HP.580008572\"> </a></td><td>External ear malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0009738<a name=\"hpo-HP.580009738\"> </a></td><td>Abnormality of the antihelix</td></tr><tr><td style=\"white-space:nowrap\">HP:0011328<a name=\"hpo-HP.580011328\"> </a></td><td>Abnormality of fontanelles</td></tr><tr><td style=\"white-space:nowrap\">HP:0012155<a name=\"hpo-HP.580012155\"> </a></td><td>Decreased corneal sensation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004602<a name=\"hpo-HP.580004602\"> </a></td><td>Cervical C2/C3 vertebral fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002997<a name=\"hpo-HP.580002997\"> </a></td><td>Abnormality of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0009777<a name=\"hpo-HP.580009777\"> </a></td><td>Absent thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002893<a name=\"hpo-HP.580002893\"> </a></td><td>Pituitary adenoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0040278<a name=\"hpo-HP.580040278\"> </a></td><td>Prolactinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001555<a name=\"hpo-HP.580001555\"> </a></td><td>Asymmetry of the thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0000902<a name=\"hpo-HP.580000902\"> </a></td><td>Rib fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002164<a name=\"hpo-HP.580002164\"> </a></td><td>Nail dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011314<a name=\"hpo-HP.580011314\"> </a></td><td>Abnormality of long bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002867<a name=\"hpo-HP.580002867\"> </a></td><td>Abnormality of the ilium</td></tr><tr><td style=\"white-space:nowrap\">HP:0000774<a name=\"hpo-HP.580000774\"> </a></td><td>Narrow chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0006482<a name=\"hpo-HP.580006482\"> </a></td><td>Abnormality of dental morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0004383<a name=\"hpo-HP.580004383\"> </a></td><td>Hypoplastic left heart</td></tr><tr><td style=\"white-space:nowrap\">HP:0002015<a name=\"hpo-HP.580002015\"> </a></td><td>Dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0500093<a name=\"hpo-HP.580500093\"> </a></td><td>Food allergy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001519<a name=\"hpo-HP.580001519\"> </a></td><td>Disproportionate tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0003179<a name=\"hpo-HP.580003179\"> </a></td><td>Protrusio acetabuli</td></tr><tr><td style=\"white-space:nowrap\">HP:0007385<a name=\"hpo-HP.580007385\"> </a></td><td>Aplasia cutis congenita of scalp</td></tr><tr><td style=\"white-space:nowrap\">HP:0000716<a name=\"hpo-HP.580000716\"> </a></td><td>Depressivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0012583<a name=\"hpo-HP.580012583\"> </a></td><td>Unilateral renal hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000618<a name=\"hpo-HP.580000618\"> </a></td><td>Blindness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001004<a name=\"hpo-HP.580001004\"> </a></td><td>Lymphedema</td></tr><tr><td style=\"white-space:nowrap\">HP:0002652<a name=\"hpo-HP.580002652\"> </a></td><td>Skeletal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012520<a name=\"hpo-HP.580012520\"> </a></td><td>Perivascular spaces</td></tr><tr><td style=\"white-space:nowrap\">HP:0005293<a name=\"hpo-HP.580005293\"> </a></td><td>Venous insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0012432<a name=\"hpo-HP.580012432\"> </a></td><td>Chronic fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002578<a name=\"hpo-HP.580002578\"> </a></td><td>Gastroparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001658<a name=\"hpo-HP.580001658\"> </a></td><td>Myocardial infarction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001802<a name=\"hpo-HP.580001802\"> </a></td><td>Absent toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0001821<a name=\"hpo-HP.580001821\"> </a></td><td>Broad nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0000807<a name=\"hpo-HP.580000807\"> </a></td><td>Glandular hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0100582<a name=\"hpo-HP.580100582\"> </a></td><td>Nasal polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002653<a name=\"hpo-HP.580002653\"> </a></td><td>Bone pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0001073<a name=\"hpo-HP.580001073\"> </a></td><td>Cigarette-paper scars</td></tr><tr><td style=\"white-space:nowrap\">HP:0031913<a name=\"hpo-HP.580031913\"> </a></td><td>Rhombencephalosynapsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002617<a name=\"hpo-HP.580002617\"> </a></td><td>Dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005107<a name=\"hpo-HP.580005107\"> </a></td><td>Abnormal sacrum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002025<a name=\"hpo-HP.580002025\"> </a></td><td>Anal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0009099<a name=\"hpo-HP.580009099\"> </a></td><td>Median cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0003212<a name=\"hpo-HP.580003212\"> </a></td><td>Increased circulating IgE level</td></tr><tr><td style=\"white-space:nowrap\">HP:0001319<a name=\"hpo-HP.580001319\"> </a></td><td>Neonatal hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002659<a name=\"hpo-HP.580002659\"> </a></td><td>Increased susceptibility to fractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0025246<a name=\"hpo-HP.580025246\"> </a></td><td>Trichilemmal cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0002107<a name=\"hpo-HP.580002107\"> </a></td><td>Pneumothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0000107<a name=\"hpo-HP.580000107\"> </a></td><td>Renal cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0001025<a name=\"hpo-HP.580001025\"> </a></td><td>Urticaria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002204<a name=\"hpo-HP.580002204\"> </a></td><td>Pulmonary embolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001058<a name=\"hpo-HP.580001058\"> </a></td><td>Poor wound healing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003010<a name=\"hpo-HP.580003010\"> </a></td><td>Prolonged bleeding time</td></tr><tr><td style=\"white-space:nowrap\">HP:0100502<a name=\"hpo-HP.580100502\"> </a></td><td>Vitamin B12 deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0100510<a name=\"hpo-HP.580100510\"> </a></td><td>Low levels of vitamin C</td></tr><tr><td style=\"white-space:nowrap\">HP:0030976<a name=\"hpo-HP.580030976\"> </a></td><td>Abnormal factor VIII activity</td></tr><tr><td style=\"white-space:nowrap\">HP:0100789<a name=\"hpo-HP.580100789\"> </a></td><td>Torus palatinus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000108<a name=\"hpo-HP.580000108\"> </a></td><td>Renal corticomedullary cysts</td></tr><tr><td style=\"white-space:nowrap\">HP:0000072<a name=\"hpo-HP.580000072\"> </a></td><td>Hydroureter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000019<a name=\"hpo-HP.580000019\"> </a></td><td>Urinary hesitancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100771<a name=\"hpo-HP.580100771\"> </a></td><td>Hypoperistalsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000021<a name=\"hpo-HP.580000021\"> </a></td><td>Megacystis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004388<a name=\"hpo-HP.580004388\"> </a></td><td>Microcolon</td></tr><tr><td style=\"white-space:nowrap\">HP:0005247<a name=\"hpo-HP.580005247\"> </a></td><td>Hypoplasia of the abdominal wall musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0004794<a name=\"hpo-HP.580004794\"> </a></td><td>Malrotation of small bowel</td></tr><tr><td style=\"white-space:nowrap\">HP:0000045<a name=\"hpo-HP.580000045\"> </a></td><td>Abnormality of the scrotum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002236<a name=\"hpo-HP.580002236\"> </a></td><td>Frontal upsweep of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000212<a name=\"hpo-HP.580000212\"> </a></td><td>Gingival overgrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001808<a name=\"hpo-HP.580001808\"> </a></td><td>Fragile nails</td></tr><tr><td style=\"white-space:nowrap\">HP:0000225<a name=\"hpo-HP.580000225\"> </a></td><td>Gingival bleeding</td></tr><tr><td style=\"white-space:nowrap\">HP:0006009<a name=\"hpo-HP.580006009\"> </a></td><td>Broad phalanx</td></tr><tr><td style=\"white-space:nowrap\">HP:0001837<a name=\"hpo-HP.580001837\"> </a></td><td>Broad toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001946<a name=\"hpo-HP.580001946\"> </a></td><td>Ketosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002490<a name=\"hpo-HP.580002490\"> </a></td><td>Increased CSF lactate</td></tr><tr><td style=\"white-space:nowrap\">HP:0002922<a name=\"hpo-HP.580002922\"> </a></td><td>Increased CSF protein</td></tr><tr><td style=\"white-space:nowrap\">HP:0003128<a name=\"hpo-HP.580003128\"> </a></td><td>Lactic acidosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003111<a name=\"hpo-HP.580003111\"> </a></td><td>Abnormal blood ion concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0032234<a name=\"hpo-HP.580032234\"> </a></td><td>Increased circulating creatine kinase MM isoform</td></tr><tr><td style=\"white-space:nowrap\">HP:0003348<a name=\"hpo-HP.580003348\"> </a></td><td>Hyperalaninemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008347<a name=\"hpo-HP.580008347\"> </a></td><td>Decreased activity of mitochondrial complex IV</td></tr><tr><td style=\"white-space:nowrap\">HP:0000326<a name=\"hpo-HP.580000326\"> </a></td><td>Abnormality of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0010758<a name=\"hpo-HP.580010758\"> </a></td><td>Abnormality of the premaxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0005681<a name=\"hpo-HP.580005681\"> </a></td><td>Juvenile rheumatoid arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000514<a name=\"hpo-HP.580000514\"> </a></td><td>Slow saccadic eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0002788<a name=\"hpo-HP.580002788\"> </a></td><td>Recurrent upper respiratory tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0003396<a name=\"hpo-HP.580003396\"> </a></td><td>Syringomyelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003011<a name=\"hpo-HP.580003011\"> </a></td><td>Abnormality of the musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0002098<a name=\"hpo-HP.580002098\"> </a></td><td>Respiratory distress</td></tr><tr><td style=\"white-space:nowrap\">HP:0002018<a name=\"hpo-HP.580002018\"> </a></td><td>Nausea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002014<a name=\"hpo-HP.580002014\"> </a></td><td>Diarrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0025168<a name=\"hpo-HP.580025168\"> </a></td><td>Left ventricular diastolic dysfunction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001679<a name=\"hpo-HP.580001679\"> </a></td><td>Abnormal aortic morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000159<a name=\"hpo-HP.580000159\"> </a></td><td>Abnormal lip morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011338<a name=\"hpo-HP.580011338\"> </a></td><td>Abnormality of mouth shape</td></tr><tr><td style=\"white-space:nowrap\">HP:0000478<a name=\"hpo-HP.580000478\"> </a></td><td>Abnormality of the eye</td></tr><tr><td style=\"white-space:nowrap\">HP:0000154<a name=\"hpo-HP.580000154\"> </a></td><td>Wide mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001513<a name=\"hpo-HP.580001513\"> </a></td><td>Obesity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002475<a name=\"hpo-HP.580002475\"> </a></td><td>Myelomeningocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0003765<a name=\"hpo-HP.580003765\"> </a></td><td>Psoriasiform dermatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010289<a name=\"hpo-HP.580010289\"> </a></td><td>Cleft of alveolar ridge of maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0003908<a name=\"hpo-HP.580003908\"> </a></td><td>Corner fracture of metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002190<a name=\"hpo-HP.580002190\"> </a></td><td>Choroid plexus cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0004370<a name=\"hpo-HP.580004370\"> </a></td><td>Abnormality of temperature regulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011611<a name=\"hpo-HP.580011611\"> </a></td><td>Interrupted aortic arch</td></tr><tr><td style=\"white-space:nowrap\">HP:0000737<a name=\"hpo-HP.580000737\"> </a></td><td>Irritability</td></tr><tr><td style=\"white-space:nowrap\">HP:0001344<a name=\"hpo-HP.580001344\"> </a></td><td>Absent speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0002376<a name=\"hpo-HP.580002376\"> </a></td><td>Developmental regression</td></tr><tr><td style=\"white-space:nowrap\">HP:0002140<a name=\"hpo-HP.580002140\"> </a></td><td>Ischemic stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0001287<a name=\"hpo-HP.580001287\"> </a></td><td>Meningitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002721<a name=\"hpo-HP.580002721\"> </a></td><td>Immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000041<a name=\"hpo-HP.580000041\"> </a></td><td>Chordee</td></tr><tr><td style=\"white-space:nowrap\">HP:0012854<a name=\"hpo-HP.580012854\"> </a></td><td>Midshaft hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0000808<a name=\"hpo-HP.580000808\"> </a></td><td>Penoscrotal hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0000048<a name=\"hpo-HP.580000048\"> </a></td><td>Bifid scrotum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001047<a name=\"hpo-HP.580001047\"> </a></td><td>Atopic dermatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001621<a name=\"hpo-HP.580001621\"> </a></td><td>Weak voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0002372<a name=\"hpo-HP.580002372\"> </a></td><td>Normal interictal EEG</td></tr><tr><td style=\"white-space:nowrap\">HP:0012803<a name=\"hpo-HP.580012803\"> </a></td><td>Anisometropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011386<a name=\"hpo-HP.580011386\"> </a></td><td>Narrow internal auditory canal</td></tr><tr><td style=\"white-space:nowrap\">HP:0012714<a name=\"hpo-HP.580012714\"> </a></td><td>Severe hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0006485<a name=\"hpo-HP.580006485\"> </a></td><td>Agenesis of incisor</td></tr><tr><td style=\"white-space:nowrap\">HP:0000787<a name=\"hpo-HP.580000787\"> </a></td><td>Nephrolithiasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011332<a name=\"hpo-HP.580011332\"> </a></td><td>Hemifacial hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001909<a name=\"hpo-HP.580001909\"> </a></td><td>Leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004808<a name=\"hpo-HP.580004808\"> </a></td><td>Acute myeloid leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006495<a name=\"hpo-HP.580006495\"> </a></td><td>Aplasia/Hypoplasia of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0001180<a name=\"hpo-HP.580001180\"> </a></td><td>Hand oligodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002991<a name=\"hpo-HP.580002991\"> </a></td><td>Abnormality of fibula morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001849<a name=\"hpo-HP.580001849\"> </a></td><td>Foot oligodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0006507<a name=\"hpo-HP.580006507\"> </a></td><td>Aplasia/hypoplasia of the humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0005613<a name=\"hpo-HP.580005613\"> </a></td><td>Aplasia/hypoplasia of the femur</td></tr><tr><td style=\"white-space:nowrap\">HP:0006492<a name=\"hpo-HP.580006492\"> </a></td><td>Aplasia/Hypoplasia of the fibula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000098<a name=\"hpo-HP.580000098\"> </a></td><td>Tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0003311<a name=\"hpo-HP.580003311\"> </a></td><td>Hypoplasia of the odontoid process</td></tr><tr><td style=\"white-space:nowrap\">HP:0005752<a name=\"hpo-HP.580005752\"> </a></td><td>Flattened moderately deformed vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0030039<a name=\"hpo-HP.580030039\"> </a></td><td>Fused thoracic vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0003304<a name=\"hpo-HP.580003304\"> </a></td><td>Spondylolysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001659<a name=\"hpo-HP.580001659\"> </a></td><td>Aortic regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002984<a name=\"hpo-HP.580002984\"> </a></td><td>Hypoplasia of the radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0009944<a name=\"hpo-HP.580009944\"> </a></td><td>Partial duplication of thumb phalanx</td></tr><tr><td style=\"white-space:nowrap\">HP:0005819<a name=\"hpo-HP.580005819\"> </a></td><td>Short middle phalanx of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0002110<a name=\"hpo-HP.580002110\"> </a></td><td>Bronchiectasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001677<a name=\"hpo-HP.580001677\"> </a></td><td>Coronary artery atherosclerosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001737<a name=\"hpo-HP.580001737\"> </a></td><td>Pancreatic cysts</td></tr><tr><td style=\"white-space:nowrap\">HP:0005113<a name=\"hpo-HP.580005113\"> </a></td><td>Aortic arch aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003022<a name=\"hpo-HP.580003022\"> </a></td><td>Hypoplasia of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0002205<a name=\"hpo-HP.580002205\"> </a></td><td>Recurrent respiratory infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0001669<a name=\"hpo-HP.580001669\"> </a></td><td>Transposition of the great arteries</td></tr><tr><td style=\"white-space:nowrap\">HP:0001716<a name=\"hpo-HP.580001716\"> </a></td><td>Wolff-Parkinson-White syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002758<a name=\"hpo-HP.580002758\"> </a></td><td>Osteoarthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002037<a name=\"hpo-HP.580002037\"> </a></td><td>Inflammation of the large intestine</td></tr><tr><td style=\"white-space:nowrap\">HP:0009892<a name=\"hpo-HP.580009892\"> </a></td><td>Anotia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011331<a name=\"hpo-HP.580011331\"> </a></td><td>Hemifacial atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0009118<a name=\"hpo-HP.580009118\"> </a></td><td>Aplasia/Hypoplasia of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0009940<a name=\"hpo-HP.580009940\"> </a></td><td>Asymmetry of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000682<a name=\"hpo-HP.580000682\"> </a></td><td>Abnormality of dental enamel</td></tr><tr><td style=\"white-space:nowrap\">HP:0009908<a name=\"hpo-HP.580009908\"> </a></td><td>Anterior creases of earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001541<a name=\"hpo-HP.580001541\"> </a></td><td>Ascites</td></tr><tr><td style=\"white-space:nowrap\">HP:0006687<a name=\"hpo-HP.580006687\"> </a></td><td>Aortic tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0010535<a name=\"hpo-HP.580010535\"> </a></td><td>Sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0100633<a name=\"hpo-HP.580100633\"> </a></td><td>Esophagitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002105<a name=\"hpo-HP.580002105\"> </a></td><td>Hemoptysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002613<a name=\"hpo-HP.580002613\"> </a></td><td>Biliary cirrhosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004469<a name=\"hpo-HP.580004469\"> </a></td><td>Chronic bronchitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002720<a name=\"hpo-HP.580002720\"> </a></td><td>Decreased circulating IgA level</td></tr><tr><td style=\"white-space:nowrap\">HP:0002904<a name=\"hpo-HP.580002904\"> </a></td><td>Hyperbilirubinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003237<a name=\"hpo-HP.580003237\"> </a></td><td>Increased circulating IgG level</td></tr><tr><td style=\"white-space:nowrap\">HP:0003262<a name=\"hpo-HP.580003262\"> </a></td><td>Smooth muscle antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0011227<a name=\"hpo-HP.580011227\"> </a></td><td>Elevated C-reactive protein level</td></tr><tr><td style=\"white-space:nowrap\">HP:0001852<a name=\"hpo-HP.580001852\"> </a></td><td>Sandal gap</td></tr><tr><td style=\"white-space:nowrap\">HP:0004381<a name=\"hpo-HP.580004381\"> </a></td><td>Supravalvular aortic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100700<a name=\"hpo-HP.580100700\"> </a></td><td>Abnormal arachnoid mater morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002624<a name=\"hpo-HP.580002624\"> </a></td><td>Abnormal venous morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002289<a name=\"hpo-HP.580002289\"> </a></td><td>Alopecia universalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0009588<a name=\"hpo-HP.580009588\"> </a></td><td>Vestibular Schwannoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001648<a name=\"hpo-HP.580001648\"> </a></td><td>Cor pulmonale</td></tr><tr><td style=\"white-space:nowrap\">HP:0002091<a name=\"hpo-HP.580002091\"> </a></td><td>Restrictive ventilatory defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002092<a name=\"hpo-HP.580002092\"> </a></td><td>Pulmonary arterial hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0002113<a name=\"hpo-HP.580002113\"> </a></td><td>Pulmonary infiltrates</td></tr><tr><td style=\"white-space:nowrap\">HP:0003138<a name=\"hpo-HP.580003138\"> </a></td><td>Increased blood urea nitrogen</td></tr><tr><td style=\"white-space:nowrap\">HP:0003259<a name=\"hpo-HP.580003259\"> </a></td><td>Elevated serum creatinine</td></tr><tr><td style=\"white-space:nowrap\">HP:0005180<a name=\"hpo-HP.580005180\"> </a></td><td>Tricuspid regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0012585<a name=\"hpo-HP.580012585\"> </a></td><td>Renal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005133<a name=\"hpo-HP.580005133\"> </a></td><td>Right ventricular dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005575<a name=\"hpo-HP.580005575\"> </a></td><td>Hemolytic-uremic syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0001697<a name=\"hpo-HP.580001697\"> </a></td><td>Abnormal pericardium morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012486<a name=\"hpo-HP.580012486\"> </a></td><td>Myelitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002385<a name=\"hpo-HP.580002385\"> </a></td><td>Paraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006706<a name=\"hpo-HP.580006706\"> </a></td><td>Cystic liver disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0010880<a name=\"hpo-HP.580010880\"> </a></td><td>Increased nuchal translucency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000457<a name=\"hpo-HP.580000457\"> </a></td><td>Depressed nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0002263<a name=\"hpo-HP.580002263\"> </a></td><td>Exaggerated cupid's bow</td></tr><tr><td style=\"white-space:nowrap\">HP:0002500<a name=\"hpo-HP.580002500\"> </a></td><td>Abnormality of the cerebral white matter</td></tr><tr><td style=\"white-space:nowrap\">HP:0002835<a name=\"hpo-HP.580002835\"> </a></td><td>Aspiration</td></tr><tr><td style=\"white-space:nowrap\">HP:0000600<a name=\"hpo-HP.580000600\"> </a></td><td>Abnormality of the pharynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0004327<a name=\"hpo-HP.580004327\"> </a></td><td>Abnormal vitreous humor morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0004378<a name=\"hpo-HP.580004378\"> </a></td><td>Abnormality of the anus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012374<a name=\"hpo-HP.580012374\"> </a></td><td>obsolete Abnormal globe morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100768<a name=\"hpo-HP.580100768\"> </a></td><td>Choriocarcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0030991<a name=\"hpo-HP.580030991\"> </a></td><td>Sclerosing cholangitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006510<a name=\"hpo-HP.580006510\"> </a></td><td>Chronic pulmonary obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0000710<a name=\"hpo-HP.580000710\"> </a></td><td>Hyperorality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001270<a name=\"hpo-HP.580001270\"> </a></td><td>Motor delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0001548<a name=\"hpo-HP.580001548\"> </a></td><td>Overgrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002311<a name=\"hpo-HP.580002311\"> </a></td><td>Incoordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0006288<a name=\"hpo-HP.580006288\"> </a></td><td>Advanced eruption of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0006323<a name=\"hpo-HP.580006323\"> </a></td><td>Premature loss of primary teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009890<a name=\"hpo-HP.580009890\"> </a></td><td>High anterior hairline</td></tr><tr><td style=\"white-space:nowrap\">HP:0100034<a name=\"hpo-HP.580100034\"> </a></td><td>Motor tics</td></tr><tr><td style=\"white-space:nowrap\">HP:0100035<a name=\"hpo-HP.580100035\"> </a></td><td>Phonic tics</td></tr><tr><td style=\"white-space:nowrap\">HP:0000348<a name=\"hpo-HP.580000348\"> </a></td><td>High forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0001520<a name=\"hpo-HP.580001520\"> </a></td><td>Large for gestational age</td></tr><tr><td style=\"white-space:nowrap\">HP:0001239<a name=\"hpo-HP.580001239\"> </a></td><td>Wrist flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0007359<a name=\"hpo-HP.580007359\"> </a></td><td>Focal-onset seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000430<a name=\"hpo-HP.580000430\"> </a></td><td>Underdeveloped nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0007400<a name=\"hpo-HP.580007400\"> </a></td><td>Irregular hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0100495<a name=\"hpo-HP.580100495\"> </a></td><td>Mastocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012378<a name=\"hpo-HP.580012378\"> </a></td><td>Fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002046<a name=\"hpo-HP.580002046\"> </a></td><td>Heat intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0003270<a name=\"hpo-HP.580003270\"> </a></td><td>Abdominal distention</td></tr><tr><td style=\"white-space:nowrap\">HP:0002180<a name=\"hpo-HP.580002180\"> </a></td><td>Neurodegeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0003493<a name=\"hpo-HP.580003493\"> </a></td><td>Antinuclear antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0030057<a name=\"hpo-HP.580030057\"> </a></td><td>Autoimmune antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0006802<a name=\"hpo-HP.580006802\"> </a></td><td>Abnormal anterior horn cell morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000064<a name=\"hpo-HP.580000064\"> </a></td><td>Hypoplastic labia minora</td></tr><tr><td style=\"white-space:nowrap\">HP:0000338<a name=\"hpo-HP.580000338\"> </a></td><td>Hypomimic face</td></tr><tr><td style=\"white-space:nowrap\">HP:0001642<a name=\"hpo-HP.580001642\"> </a></td><td>Pulmonic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011344<a name=\"hpo-HP.580011344\"> </a></td><td>Severe global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0200007<a name=\"hpo-HP.580200007\"> </a></td><td>Abnormal size of the palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0004464<a name=\"hpo-HP.580004464\"> </a></td><td>Postauricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0000130<a name=\"hpo-HP.580000130\"> </a></td><td>Abnormality of the uterus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000137<a name=\"hpo-HP.580000137\"> </a></td><td>Abnormality of the ovary</td></tr><tr><td style=\"white-space:nowrap\">HP:0000142<a name=\"hpo-HP.580000142\"> </a></td><td>Abnormal vagina morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000370<a name=\"hpo-HP.580000370\"> </a></td><td>Abnormality of the middle ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0011787<a name=\"hpo-HP.580011787\"> </a></td><td>Central hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000274<a name=\"hpo-HP.580000274\"> </a></td><td>Small face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000446<a name=\"hpo-HP.580000446\"> </a></td><td>Narrow nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000622<a name=\"hpo-HP.580000622\"> </a></td><td>Blurred vision</td></tr><tr><td style=\"white-space:nowrap\">HP:0001245<a name=\"hpo-HP.580001245\"> </a></td><td>Small thenar eminence</td></tr><tr><td style=\"white-space:nowrap\">HP:0009601<a name=\"hpo-HP.580009601\"> </a></td><td>Aplasia/Hypoplasia of the thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0011343<a name=\"hpo-HP.580011343\"> </a></td><td>Moderate global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0000419<a name=\"hpo-HP.580000419\"> </a></td><td>Abnormality of the nasal septum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000502<a name=\"hpo-HP.580000502\"> </a></td><td>Abnormal conjunctiva morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000591<a name=\"hpo-HP.580000591\"> </a></td><td>Abnormal sclera morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000615<a name=\"hpo-HP.580000615\"> </a></td><td>Abnormal pupil morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001163<a name=\"hpo-HP.580001163\"> </a></td><td>Abnormality of the metacarpal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0001832<a name=\"hpo-HP.580001832\"> </a></td><td>Abnormal metatarsal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001850<a name=\"hpo-HP.580001850\"> </a></td><td>Abnormality of the tarsal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0010490<a name=\"hpo-HP.580010490\"> </a></td><td>Abnormality of the palmar creases</td></tr><tr><td style=\"white-space:nowrap\">HP:0010881<a name=\"hpo-HP.580010881\"> </a></td><td>Abnormality of the umbilical cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0009113<a name=\"hpo-HP.580009113\"> </a></td><td>Diaphragmatic weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0011664<a name=\"hpo-HP.580011664\"> </a></td><td>Left ventricular noncompaction cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100240<a name=\"hpo-HP.580100240\"> </a></td><td>Synostosis of joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0001838<a name=\"hpo-HP.580001838\"> </a></td><td>Rocker bottom foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0003717<a name=\"hpo-HP.580003717\"> </a></td><td>Minimal subcutaneous fat</td></tr><tr><td style=\"white-space:nowrap\">HP:0001339<a name=\"hpo-HP.580001339\"> </a></td><td>Lissencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001591<a name=\"hpo-HP.580001591\"> </a></td><td>Bell-shaped thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0002655<a name=\"hpo-HP.580002655\"> </a></td><td>Spondyloepiphyseal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002983<a name=\"hpo-HP.580002983\"> </a></td><td>Micromelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003016<a name=\"hpo-HP.580003016\"> </a></td><td>Metaphyseal widening</td></tr><tr><td style=\"white-space:nowrap\">HP:0009826<a name=\"hpo-HP.580009826\"> </a></td><td>Limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0004488<a name=\"hpo-HP.580004488\"> </a></td><td>Macrocephaly at birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001695<a name=\"hpo-HP.580001695\"> </a></td><td>Cardiac arrest</td></tr><tr><td style=\"white-space:nowrap\">HP:0001712<a name=\"hpo-HP.580001712\"> </a></td><td>Left ventricular hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100775<a name=\"hpo-HP.580100775\"> </a></td><td>Dural ectasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000846<a name=\"hpo-HP.580000846\"> </a></td><td>Adrenal insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002925<a name=\"hpo-HP.580002925\"> </a></td><td>Increased thyroid-stimulating hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0100646<a name=\"hpo-HP.580100646\"> </a></td><td>Thyroiditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000836<a name=\"hpo-HP.580000836\"> </a></td><td>Hyperthyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0004414<a name=\"hpo-HP.580004414\"> </a></td><td>Abnormality of the pulmonary artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0000465<a name=\"hpo-HP.580000465\"> </a></td><td>Webbed neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000723<a name=\"hpo-HP.580000723\"> </a></td><td>Restrictive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0002253<a name=\"hpo-HP.580002253\"> </a></td><td>Colonic diverticula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001310<a name=\"hpo-HP.580001310\"> </a></td><td>Dysmetria</td></tr><tr><td style=\"white-space:nowrap\">HP:0000093<a name=\"hpo-HP.580000093\"> </a></td><td>Proteinuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002907<a name=\"hpo-HP.580002907\"> </a></td><td>Microscopic hematuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0003073<a name=\"hpo-HP.580003073\"> </a></td><td>Hypoalbuminemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004315<a name=\"hpo-HP.580004315\"> </a></td><td>Decreased circulating IgG level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000795<a name=\"hpo-HP.580000795\"> </a></td><td>Abnormality of the urethra</td></tr><tr><td style=\"white-space:nowrap\">HP:0001015<a name=\"hpo-HP.580001015\"> </a></td><td>Prominent superficial veins</td></tr><tr><td style=\"white-space:nowrap\">HP:0004691<a name=\"hpo-HP.580004691\"> </a></td><td>2-3 toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005328<a name=\"hpo-HP.580005328\"> </a></td><td>Progeroid facial appearance</td></tr><tr><td style=\"white-space:nowrap\">HP:0005487<a name=\"hpo-HP.580005487\"> </a></td><td>Prominent metopic ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0007552<a name=\"hpo-HP.580007552\"> </a></td><td>Abnormal subcutaneous fat tissue distribution</td></tr><tr><td style=\"white-space:nowrap\">HP:0100678<a name=\"hpo-HP.580100678\"> </a></td><td>Premature skin wrinkling</td></tr><tr><td style=\"white-space:nowrap\">HP:0031137<a name=\"hpo-HP.580031137\"> </a></td><td>Storage in hepatocytes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002521<a name=\"hpo-HP.580002521\"> </a></td><td>Hypsarrhythmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005390<a name=\"hpo-HP.580005390\"> </a></td><td>Recurrent opportunistic infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0002716<a name=\"hpo-HP.580002716\"> </a></td><td>Lymphadenopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005379<a name=\"hpo-HP.580005379\"> </a></td><td>obsolete Severe T lymphocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004432<a name=\"hpo-HP.580004432\"> </a></td><td>Agammaglobulinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006695<a name=\"hpo-HP.580006695\"> </a></td><td>Atrioventricular canal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0001733<a name=\"hpo-HP.580001733\"> </a></td><td>Pancreatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002350<a name=\"hpo-HP.580002350\"> </a></td><td>Cerebellar cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0012110<a name=\"hpo-HP.580012110\"> </a></td><td>Hypoplasia of the pons</td></tr><tr><td style=\"white-space:nowrap\">HP:0001948<a name=\"hpo-HP.580001948\"> </a></td><td>Alkalosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003113<a name=\"hpo-HP.580003113\"> </a></td><td>Hypochloremia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003155<a name=\"hpo-HP.580003155\"> </a></td><td>Elevated alkaline phosphatase</td></tr><tr><td style=\"white-space:nowrap\">HP:0003542<a name=\"hpo-HP.580003542\"> </a></td><td>Increased serum pyruvate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000421<a name=\"hpo-HP.580000421\"> </a></td><td>Epistaxis</td></tr><tr><td style=\"white-space:nowrap\">HP:0200136<a name=\"hpo-HP.580200136\"> </a></td><td>Oral-pharyngeal dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000805<a name=\"hpo-HP.580000805\"> </a></td><td>Enuresis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005616<a name=\"hpo-HP.580005616\"> </a></td><td>Accelerated skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002459<a name=\"hpo-HP.580002459\"> </a></td><td>obsolete Dysautonomia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007302<a name=\"hpo-HP.580007302\"> </a></td><td>Bipolar affective disorder</td></tr><tr><td style=\"white-space:nowrap\">HP:0100602<a name=\"hpo-HP.580100602\"> </a></td><td>Preeclampsia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100508<a name=\"hpo-HP.580100508\"> </a></td><td>Abnormality of vitamin metabolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001140<a name=\"hpo-HP.580001140\"> </a></td><td>Limbal dermoid</td></tr><tr><td style=\"white-space:nowrap\">HP:0000143<a name=\"hpo-HP.580000143\"> </a></td><td>Rectovaginal fistula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001746<a name=\"hpo-HP.580001746\"> </a></td><td>Asplenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012715<a name=\"hpo-HP.580012715\"> </a></td><td>Profound hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001748<a name=\"hpo-HP.580001748\"> </a></td><td>Polysplenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003072<a name=\"hpo-HP.580003072\"> </a></td><td>Hypercalcemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002905<a name=\"hpo-HP.580002905\"> </a></td><td>Hyperphosphatemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002901<a name=\"hpo-HP.580002901\"> </a></td><td>Hypocalcemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001367<a name=\"hpo-HP.580001367\"> </a></td><td>Abnormal joint morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0010562<a name=\"hpo-HP.580010562\"> </a></td><td>Keloids</td></tr><tr><td style=\"white-space:nowrap\">HP:0004430<a name=\"hpo-HP.580004430\"> </a></td><td>Severe combined immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000003<a name=\"hpo-HP.580000003\"> </a></td><td>Multicystic kidney dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010980<a name=\"hpo-HP.580010980\"> </a></td><td>Hyperlipoproteinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002155<a name=\"hpo-HP.580002155\"> </a></td><td>Hypertriglyceridemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000520<a name=\"hpo-HP.580000520\"> </a></td><td>Proptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000180<a name=\"hpo-HP.580000180\"> </a></td><td>Lobulated tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0005486<a name=\"hpo-HP.580005486\"> </a></td><td>Small fontanelle</td></tr><tr><td style=\"white-space:nowrap\">HP:0000891<a name=\"hpo-HP.580000891\"> </a></td><td>Cervical ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002557<a name=\"hpo-HP.580002557\"> </a></td><td>Hypoplastic nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0009112<a name=\"hpo-HP.580009112\"> </a></td><td>Aplasia of the left hemidiaphragm</td></tr><tr><td style=\"white-space:nowrap\">HP:0001719<a name=\"hpo-HP.580001719\"> </a></td><td>Double outlet right ventricle</td></tr><tr><td style=\"white-space:nowrap\">HP:0001682<a name=\"hpo-HP.580001682\"> </a></td><td>Subvalvular aortic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001667<a name=\"hpo-HP.580001667\"> </a></td><td>Right ventricular hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002101<a name=\"hpo-HP.580002101\"> </a></td><td>Abnormal lung lobation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002202<a name=\"hpo-HP.580002202\"> </a></td><td>Pleural effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002566<a name=\"hpo-HP.580002566\"> </a></td><td>Intestinal malrotation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004510<a name=\"hpo-HP.580004510\"> </a></td><td>Pancreatic islet-cell hyperplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001747<a name=\"hpo-HP.580001747\"> </a></td><td>Accessory spleen</td></tr><tr><td style=\"white-space:nowrap\">HP:0002181<a name=\"hpo-HP.580002181\"> </a></td><td>Cerebral edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000967<a name=\"hpo-HP.580000967\"> </a></td><td>Petechiae</td></tr><tr><td style=\"white-space:nowrap\">HP:0009702<a name=\"hpo-HP.580009702\"> </a></td><td>Carpal synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000927<a name=\"hpo-HP.580000927\"> </a></td><td>Abnormality of skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004348<a name=\"hpo-HP.580004348\"> </a></td><td>Abnormality of bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0003019<a name=\"hpo-HP.580003019\"> </a></td><td>Abnormality of the wrist</td></tr><tr><td style=\"white-space:nowrap\">HP:0003063<a name=\"hpo-HP.580003063\"> </a></td><td>Abnormality of the humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001059<a name=\"hpo-HP.580001059\"> </a></td><td>Pterygium</td></tr><tr><td style=\"white-space:nowrap\">HP:0001528<a name=\"hpo-HP.580001528\"> </a></td><td>Hemihypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011228<a name=\"hpo-HP.580011228\"> </a></td><td>Horizontal eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000766<a name=\"hpo-HP.580000766\"> </a></td><td>Abnormality of the sternum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001254<a name=\"hpo-HP.580001254\"> </a></td><td>Lethargy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002360<a name=\"hpo-HP.580002360\"> </a></td><td>Sleep disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0001063<a name=\"hpo-HP.580001063\"> </a></td><td>Acrocyanosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001769<a name=\"hpo-HP.580001769\"> </a></td><td>Broad foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0010280<a name=\"hpo-HP.580010280\"> </a></td><td>Stomatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001288<a name=\"hpo-HP.580001288\"> </a></td><td>Gait disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0008330<a name=\"hpo-HP.580008330\"> </a></td><td>Reduced von Willebrand factor activity</td></tr><tr><td style=\"white-space:nowrap\">HP:0001954<a name=\"hpo-HP.580001954\"> </a></td><td>Recurrent fever</td></tr><tr><td style=\"white-space:nowrap\">HP:0004311<a name=\"hpo-HP.580004311\"> </a></td><td>Abnormal macrophage morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012539<a name=\"hpo-HP.580012539\"> </a></td><td>Non-Hodgkin lymphoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0002074<a name=\"hpo-HP.580002074\"> </a></td><td>Increased neuronal autofluorescent lipopigment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002973<a name=\"hpo-HP.580002973\"> </a></td><td>Abnormality of the forearm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003203<a name=\"hpo-HP.580003203\"> </a></td><td>Impaired oxidative burst</td></tr><tr><td style=\"white-space:nowrap\">HP:0003027<a name=\"hpo-HP.580003027\"> </a></td><td>Mesomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002754<a name=\"hpo-HP.580002754\"> </a></td><td>Osteomyelitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004431<a name=\"hpo-HP.580004431\"> </a></td><td>Complement deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0001258<a name=\"hpo-HP.580001258\"> </a></td><td>Spastic paraplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012811<a name=\"hpo-HP.580012811\"> </a></td><td>Wide nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0011832<a name=\"hpo-HP.580011832\"> </a></td><td>Narrow nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000288<a name=\"hpo-HP.580000288\"> </a></td><td>Abnormality of the philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002357<a name=\"hpo-HP.580002357\"> </a></td><td>Dysphasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000871<a name=\"hpo-HP.580000871\"> </a></td><td>Panhypopituitarism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000233<a name=\"hpo-HP.580000233\"> </a></td><td>Thin vermilion border</td></tr><tr><td style=\"white-space:nowrap\">HP:0003281<a name=\"hpo-HP.580003281\"> </a></td><td>Increased serum ferritin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010752<a name=\"hpo-HP.580010752\"> </a></td><td>Cleft mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000437<a name=\"hpo-HP.580000437\"> </a></td><td>Depressed nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000453<a name=\"hpo-HP.580000453\"> </a></td><td>Choanal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000863<a name=\"hpo-HP.580000863\"> </a></td><td>Central diabetes insipidus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000058<a name=\"hpo-HP.580000058\"> </a></td><td>Abnormality of the labia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007418<a name=\"hpo-HP.580007418\"> </a></td><td>Alopecia totalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100765<a name=\"hpo-HP.580100765\"> </a></td><td>Abnormality of the tonsils</td></tr><tr><td style=\"white-space:nowrap\">HP:0100747<a name=\"hpo-HP.580100747\"> </a></td><td>Macrodactyly of toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002109<a name=\"hpo-HP.580002109\"> </a></td><td>obsolete Abnormality of the bronchi</td></tr><tr><td style=\"white-space:nowrap\">HP:0011950<a name=\"hpo-HP.580011950\"> </a></td><td>Bronchiolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002850<a name=\"hpo-HP.580002850\"> </a></td><td>Decreased circulating total IgM</td></tr><tr><td style=\"white-space:nowrap\">HP:0001395<a name=\"hpo-HP.580001395\"> </a></td><td>Hepatic fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010701<a name=\"hpo-HP.580010701\"> </a></td><td>Abnormal immunoglobulin level</td></tr><tr><td style=\"white-space:nowrap\">HP:0009928<a name=\"hpo-HP.580009928\"> </a></td><td>Thick nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0010807<a name=\"hpo-HP.580010807\"> </a></td><td>Open bite</td></tr><tr><td style=\"white-space:nowrap\">HP:0002126<a name=\"hpo-HP.580002126\"> </a></td><td>Polymicrogyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002900<a name=\"hpo-HP.580002900\"> </a></td><td>Hypokalemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000155<a name=\"hpo-HP.580000155\"> </a></td><td>Oral ulcer</td></tr><tr><td style=\"white-space:nowrap\">HP:0000135<a name=\"hpo-HP.580000135\"> </a></td><td>Hypogonadism</td></tr><tr><td style=\"white-space:nowrap\">HP:0100783<a name=\"hpo-HP.580100783\"> </a></td><td>Breast aplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000336<a name=\"hpo-HP.580000336\"> </a></td><td>Prominent supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0010557<a name=\"hpo-HP.580010557\"> </a></td><td>Overlapping fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0005100<a name=\"hpo-HP.580005100\"> </a></td><td>Premature birth following premature rupture of fetal membranes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002594<a name=\"hpo-HP.580002594\"> </a></td><td>Pancreatic hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010109<a name=\"hpo-HP.580010109\"> </a></td><td>Short hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0002334<a name=\"hpo-HP.580002334\"> </a></td><td>Abnormality of the cerebellar vermis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003326<a name=\"hpo-HP.580003326\"> </a></td><td>Myalgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001645<a name=\"hpo-HP.580001645\"> </a></td><td>Sudden cardiac death</td></tr><tr><td style=\"white-space:nowrap\">HP:0001612<a name=\"hpo-HP.580001612\"> </a></td><td>Weak cry</td></tr><tr><td style=\"white-space:nowrap\">HP:0001618<a name=\"hpo-HP.580001618\"> </a></td><td>Dysphonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001336<a name=\"hpo-HP.580001336\"> </a></td><td>Myoclonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001283<a name=\"hpo-HP.580001283\"> </a></td><td>Bulbar palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002080<a name=\"hpo-HP.580002080\"> </a></td><td>Intention tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002174<a name=\"hpo-HP.580002174\"> </a></td><td>Postural tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002064<a name=\"hpo-HP.580002064\"> </a></td><td>Spastic gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0009800<a name=\"hpo-HP.580009800\"> </a></td><td>Maternal diabetes</td></tr><tr><td style=\"white-space:nowrap\">HP:0001662<a name=\"hpo-HP.580001662\"> </a></td><td>Bradycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006595<a name=\"hpo-HP.580006595\"> </a></td><td>Scapulohumeral synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005815<a name=\"hpo-HP.580005815\"> </a></td><td>Supernumerary ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000307<a name=\"hpo-HP.580000307\"> </a></td><td>Pointed chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0012371<a name=\"hpo-HP.580012371\"> </a></td><td>Hyperplasia of midface</td></tr><tr><td style=\"white-space:nowrap\">HP:0002643<a name=\"hpo-HP.580002643\"> </a></td><td>Neonatal respiratory distress</td></tr><tr><td style=\"white-space:nowrap\">HP:0002093<a name=\"hpo-HP.580002093\"> </a></td><td>Respiratory insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0010310<a name=\"hpo-HP.580010310\"> </a></td><td>Chylothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0006376<a name=\"hpo-HP.580006376\"> </a></td><td>Limited elbow flexion</td></tr><tr><td style=\"white-space:nowrap\">HP:0006467<a name=\"hpo-HP.580006467\"> </a></td><td>Limited shoulder movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010505<a name=\"hpo-HP.580010505\"> </a></td><td>Limitation of movement at ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0010501<a name=\"hpo-HP.580010501\"> </a></td><td>Limitation of knee mobility</td></tr><tr><td style=\"white-space:nowrap\">HP:0009896<a name=\"hpo-HP.580009896\"> </a></td><td>Abnormality of the antitragus</td></tr><tr><td style=\"white-space:nowrap\">HP:0004404<a name=\"hpo-HP.580004404\"> </a></td><td>Abnormal nipple morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011957<a name=\"hpo-HP.580011957\"> </a></td><td>Abnormal pectoral muscle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000777<a name=\"hpo-HP.580000777\"> </a></td><td>Abnormality of the thymus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000418<a name=\"hpo-HP.580000418\"> </a></td><td>Narrow nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0001572<a name=\"hpo-HP.580001572\"> </a></td><td>Macrodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002967<a name=\"hpo-HP.580002967\"> </a></td><td>Cubitus valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000988<a name=\"hpo-HP.580000988\"> </a></td><td>Skin rash</td></tr><tr><td style=\"white-space:nowrap\">HP:0009733<a name=\"hpo-HP.580009733\"> </a></td><td>Glioma</td></tr><tr><td style=\"white-space:nowrap\">HP:0012452<a name=\"hpo-HP.580012452\"> </a></td><td>Restless legs</td></tr><tr><td style=\"white-space:nowrap\">HP:0100031<a name=\"hpo-HP.580100031\"> </a></td><td>Neoplasm of the thyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0030127<a name=\"hpo-HP.580030127\"> </a></td><td>Endometriosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000123<a name=\"hpo-HP.580000123\"> </a></td><td>Nephritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001974<a name=\"hpo-HP.580001974\"> </a></td><td>Leukocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010976<a name=\"hpo-HP.580010976\"> </a></td><td>B lymphocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000010<a name=\"hpo-HP.580000010\"> </a></td><td>Recurrent urinary tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0100807<a name=\"hpo-HP.580100807\"> </a></td><td>Long fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0000653<a name=\"hpo-HP.580000653\"> </a></td><td>Sparse eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0000171<a name=\"hpo-HP.580000171\"> </a></td><td>Microglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002575<a name=\"hpo-HP.580002575\"> </a></td><td>Tracheoesophageal fistula</td></tr><tr><td style=\"white-space:nowrap\">HP:0009933<a name=\"hpo-HP.580009933\"> </a></td><td>Narrow naris</td></tr><tr><td style=\"white-space:nowrap\">HP:0000883<a name=\"hpo-HP.580000883\"> </a></td><td>Thin ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000121<a name=\"hpo-HP.580000121\"> </a></td><td>Nephrocalcinosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001349<a name=\"hpo-HP.580001349\"> </a></td><td>Facial diplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012037<a name=\"hpo-HP.580012037\"> </a></td><td>Pectoralis amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100560<a name=\"hpo-HP.580100560\"> </a></td><td>Upper limb asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0005684<a name=\"hpo-HP.580005684\"> </a></td><td>Distal arthrogryposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010722<a name=\"hpo-HP.580010722\"> </a></td><td>Asymmetry of the ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0009380<a name=\"hpo-HP.580009380\"> </a></td><td>Aplasia of the fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0001657<a name=\"hpo-HP.580001657\"> </a></td><td>Prolonged QT interval</td></tr><tr><td style=\"white-space:nowrap\">HP:0002040<a name=\"hpo-HP.580002040\"> </a></td><td>Esophageal varix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000613<a name=\"hpo-HP.580000613\"> </a></td><td>Photophobia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000561<a name=\"hpo-HP.580000561\"> </a></td><td>Absent eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002223<a name=\"hpo-HP.580002223\"> </a></td><td>Absent eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0002591<a name=\"hpo-HP.580002591\"> </a></td><td>Polyphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002373<a name=\"hpo-HP.580002373\"> </a></td><td>Febrile seizure (within the age range of 3 months to 6 years)</td></tr><tr><td style=\"white-space:nowrap\">HP:0002419<a name=\"hpo-HP.580002419\"> </a></td><td>Molar tooth sign on MRI</td></tr><tr><td style=\"white-space:nowrap\">HP:0001010<a name=\"hpo-HP.580001010\"> </a></td><td>Hypopigmentation of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0005772<a name=\"hpo-HP.580005772\"> </a></td><td>Aplasia/Hypoplasia of the tibia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002211<a name=\"hpo-HP.580002211\"> </a></td><td>White forelock</td></tr><tr><td style=\"white-space:nowrap\">HP:0007126<a name=\"hpo-HP.580007126\"> </a></td><td>Proximal amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003798<a name=\"hpo-HP.580003798\"> </a></td><td>Nemaline bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0006533<a name=\"hpo-HP.580006533\"> </a></td><td>Bronchodysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003391<a name=\"hpo-HP.580003391\"> </a></td><td>Gowers sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0000771<a name=\"hpo-HP.580000771\"> </a></td><td>Gynecomastia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100785<a name=\"hpo-HP.580100785\"> </a></td><td>Insomnia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010529<a name=\"hpo-HP.580010529\"> </a></td><td>Echolalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000363<a name=\"hpo-HP.580000363\"> </a></td><td>Abnormality of earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002612<a name=\"hpo-HP.580002612\"> </a></td><td>Congenital hepatic fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006721<a name=\"hpo-HP.580006721\"> </a></td><td>Acute lymphoblastic leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001958<a name=\"hpo-HP.580001958\"> </a></td><td>Nonketotic hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003457<a name=\"hpo-HP.580003457\"> </a></td><td>EMG abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0010636<a name=\"hpo-HP.580010636\"> </a></td><td>Schizencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005266<a name=\"hpo-HP.580005266\"> </a></td><td>Intestinal polyp</td></tr><tr><td style=\"white-space:nowrap\">HP:0200063<a name=\"hpo-HP.580200063\"> </a></td><td>Colorectal polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001762<a name=\"hpo-HP.580001762\"> </a></td><td>Talipes equinovarus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000056<a name=\"hpo-HP.580000056\"> </a></td><td>Abnormality of the clitoris</td></tr><tr><td style=\"white-space:nowrap\">HP:0008655<a name=\"hpo-HP.580008655\"> </a></td><td>Aplasia/Hypoplasia of the fallopian tube</td></tr><tr><td style=\"white-space:nowrap\">HP:0002072<a name=\"hpo-HP.580002072\"> </a></td><td>Chorea</td></tr><tr><td style=\"white-space:nowrap\">HP:0008734<a name=\"hpo-HP.580008734\"> </a></td><td>Decreased testicular size</td></tr><tr><td style=\"white-space:nowrap\">HP:0002136<a name=\"hpo-HP.580002136\"> </a></td><td>Broad-based gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0010958<a name=\"hpo-HP.580010958\"> </a></td><td>Bilateral renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002510<a name=\"hpo-HP.580002510\"> </a></td><td>Spastic tetraplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003234<a name=\"hpo-HP.580003234\"> </a></td><td>Decreased plasma carnitine</td></tr><tr><td style=\"white-space:nowrap\">HP:0000720<a name=\"hpo-HP.580000720\"> </a></td><td>Mood swings</td></tr><tr><td style=\"white-space:nowrap\">HP:0012638<a name=\"hpo-HP.580012638\"> </a></td><td>Abnormal nervous system physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002803<a name=\"hpo-HP.580002803\"> </a></td><td>Congenital contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0000152<a name=\"hpo-HP.580000152\"> </a></td><td>Abnormality of head or neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0004377<a name=\"hpo-HP.580004377\"> </a></td><td>Hematological neoplasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0100006<a name=\"hpo-HP.580100006\"> </a></td><td>Neoplasm of the central nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0012759<a name=\"hpo-HP.580012759\"> </a></td><td>Neurodevelopmental abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0011805<a name=\"hpo-HP.580011805\"> </a></td><td>Abnormal skeletal muscle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003634<a name=\"hpo-HP.580003634\"> </a></td><td>Amyoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001507<a name=\"hpo-HP.580001507\"> </a></td><td>Growth abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001939<a name=\"hpo-HP.580001939\"> </a></td><td>Abnormality of metabolism/homeostasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011013<a name=\"hpo-HP.580011013\"> </a></td><td>Abnormal circulating carbohydrate concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0410008<a name=\"hpo-HP.580410008\"> </a></td><td>Abnormality of the peripheral nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0200134<a name=\"hpo-HP.580200134\"> </a></td><td>Epileptic encephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001881<a name=\"hpo-HP.580001881\"> </a></td><td>Abnormal leukocyte morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0005549<a name=\"hpo-HP.580005549\"> </a></td><td>obsolete Congenital neutropenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004439<a name=\"hpo-HP.580004439\"> </a></td><td>Craniofacial dysostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012443<a name=\"hpo-HP.580012443\"> </a></td><td>Abnormality of brain morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000202<a name=\"hpo-HP.580000202\"> </a></td><td>Oral cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0011842<a name=\"hpo-HP.580011842\"> </a></td><td>Abnormality of skeletal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003808<a name=\"hpo-HP.580003808\"> </a></td><td>Abnormal muscle tone</td></tr><tr><td style=\"white-space:nowrap\">HP:0001574<a name=\"hpo-HP.580001574\"> </a></td><td>Abnormality of the integument</td></tr><tr><td style=\"white-space:nowrap\">HP:0030056<a name=\"hpo-HP.580030056\"> </a></td><td>Uncombable hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0003549<a name=\"hpo-HP.580003549\"> </a></td><td>Abnormality of connective tissue</td></tr><tr><td style=\"white-space:nowrap\">HP:0030875<a name=\"hpo-HP.580030875\"> </a></td><td>Abnormality of pulmonary circulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000118<a name=\"hpo-HP.580000118\"> </a></td><td>Phenotypic abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0012469<a name=\"hpo-HP.580012469\"> </a></td><td>Infantile spasms</td></tr><tr><td style=\"white-space:nowrap\">HP:0032894<a name=\"hpo-HP.580032894\"> </a></td><td>Seizure precipitated by febrile infection</td></tr><tr><td style=\"white-space:nowrap\">HP:0100661<a name=\"hpo-HP.580100661\"> </a></td><td>Trigeminal neuralgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012207<a name=\"hpo-HP.580012207\"> </a></td><td>Reduced sperm motility</td></tr><tr><td style=\"white-space:nowrap\">HP:0000798<a name=\"hpo-HP.580000798\"> </a></td><td>Oligospermia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012864<a name=\"hpo-HP.580012864\"> </a></td><td>Abnormal sperm morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008232<a name=\"hpo-HP.580008232\"> </a></td><td>Elevated circulating follicle stimulating hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0040306<a name=\"hpo-HP.580040306\"> </a></td><td>Decreased male libido</td></tr><tr><td style=\"white-space:nowrap\">HP:0012208<a name=\"hpo-HP.580012208\"> </a></td><td>Immotile sperm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000027<a name=\"hpo-HP.580000027\"> </a></td><td>Azoospermia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000870<a name=\"hpo-HP.580000870\"> </a></td><td>Increased circulating prolactin concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0008187<a name=\"hpo-HP.580008187\"> </a></td><td>Absence of secondary sex characteristics</td></tr><tr><td style=\"white-space:nowrap\">HP:0010469<a name=\"hpo-HP.580010469\"> </a></td><td>Absent testis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011969<a name=\"hpo-HP.580011969\"> </a></td><td>Elevated circulating luteinizing hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0040171<a name=\"hpo-HP.580040171\"> </a></td><td>Decreased serum testosterone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0003251<a name=\"hpo-HP.580003251\"> </a></td><td>Male infertility</td></tr><tr><td style=\"white-space:nowrap\">HP:0009804<a name=\"hpo-HP.580009804\"> </a></td><td>Reduced number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000548<a name=\"hpo-HP.580000548\"> </a></td><td>Cone/cone-rod dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000546<a name=\"hpo-HP.580000546\"> </a></td><td>Retinal degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0008002<a name=\"hpo-HP.580008002\"> </a></td><td>Abnormality of macular pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000608<a name=\"hpo-HP.580000608\"> </a></td><td>Macular degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0030611<a name=\"hpo-HP.580030611\"> </a></td><td>Retinal pigment epithelial loss on macular OCT</td></tr><tr><td style=\"white-space:nowrap\">HP:0001135<a name=\"hpo-HP.580001135\"> </a></td><td>Chorioretinal dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030468<a name=\"hpo-HP.580030468\"> </a></td><td>Abnormal multifocal electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:00030532<a name=\"hpo-HP.5800030532\"> </a></td><td>Visual acuity test abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0007401<a name=\"hpo-HP.580007401\"> </a></td><td>Macular atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030466<a name=\"hpo-HP.580030466\"> </a></td><td>Abnormal full-field electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:007737<a name=\"hpo-HP.58007737\"> </a></td><td>Bone spicule pigmentation of the retina</td></tr><tr><td style=\"white-space:nowrap\">HP:0011342<a name=\"hpo-HP.580011342\"> </a></td><td>Mild global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0030610<a name=\"hpo-HP.580030610\"> </a></td><td>Photoreceptor outer segment loss on macular OCT</td></tr><tr><td style=\"white-space:nowrap\">HP:0007722<a name=\"hpo-HP.580007722\"> </a></td><td>Retinal pigment epithelial atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030493<a name=\"hpo-HP.580030493\"> </a></td><td>Abnormality of foveal pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0007843<a name=\"hpo-HP.580007843\"> </a></td><td>Attenuation of retinal blood vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0007754<a name=\"hpo-HP.580007754\"> </a></td><td>Macular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011509<a name=\"hpo-HP.580011509\"> </a></td><td>Macular hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0008527<a name=\"hpo-HP.580008527\"> </a></td><td>Congenital sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0200070<a name=\"hpo-HP.580200070\"> </a></td><td>Peripheral retinal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0007793<a name=\"hpo-HP.580007793\"> </a></td><td>Granular macular appearance</td></tr><tr><td style=\"white-space:nowrap\">HP:0007987<a name=\"hpo-HP.580007987\"> </a></td><td>Progressive visual field defects</td></tr><tr><td style=\"white-space:nowrap\">HP:0100817<a name=\"hpo-HP.580100817\"> </a></td><td>Renovascular hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0007868<a name=\"hpo-HP.580007868\"> </a></td><td>obsolete Age-related macular degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0030527<a name=\"hpo-HP.580030527\"> </a></td><td>Very severe constriction of peripheral visual field</td></tr><tr><td style=\"white-space:nowrap\">HP:0030551<a name=\"hpo-HP.580030551\"> </a></td><td>Visual acuity light perception with projection</td></tr><tr><td style=\"white-space:nowrap\">HP:0011505<a name=\"hpo-HP.580011505\"> </a></td><td>Cystoid macular edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0010442<a name=\"hpo-HP.580010442\"> </a></td><td>Polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0007642<a name=\"hpo-HP.580007642\"> </a></td><td>Congenital stationary night blindness</td></tr><tr><td style=\"white-space:nowrap\">HP:0009073<a name=\"hpo-HP.580009073\"> </a></td><td>Progressive proximal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003741<a name=\"hpo-HP.580003741\"> </a></td><td>Congenital muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100299<a name=\"hpo-HP.580100299\"> </a></td><td>Muscle fiber inclusion bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0003540<a name=\"hpo-HP.580003540\"> </a></td><td>Impaired platelet aggregation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010489<a name=\"hpo-HP.580010489\"> </a></td><td>Absent palmar crease</td></tr><tr><td style=\"white-space:nowrap\">HP:0009824<a name=\"hpo-HP.580009824\"> </a></td><td>Upper limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002395<a name=\"hpo-HP.580002395\"> </a></td><td>Lower limb hyperreflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001138<a name=\"hpo-HP.580001138\"> </a></td><td>Optic neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0007103<a name=\"hpo-HP.580007103\"> </a></td><td>Hypointensity of cerebral white matter on MRI</td></tr><tr><td style=\"white-space:nowrap\">HP:0003458<a name=\"hpo-HP.580003458\"> </a></td><td>EMG: myopathic abnormalities</td></tr><tr><td style=\"white-space:nowrap\">HP:0002987<a name=\"hpo-HP.580002987\"> </a></td><td>Elbow flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0006466<a name=\"hpo-HP.580006466\"> </a></td><td>Ankle flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0008458<a name=\"hpo-HP.580008458\"> </a></td><td>Progressive congenital scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000473<a name=\"hpo-HP.580000473\"> </a></td><td>Torticollis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011800<a name=\"hpo-HP.580011800\"> </a></td><td>Midface retrusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000597<a name=\"hpo-HP.580000597\"> </a></td><td>Ophthalmoparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005853<a name=\"hpo-HP.580005853\"> </a></td><td>Congenital foot contraction deformities</td></tr><tr><td style=\"white-space:nowrap\">HP:0007002<a name=\"hpo-HP.580007002\"> </a></td><td>Motor axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003327<a name=\"hpo-HP.580003327\"> </a></td><td>Axial muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003306<a name=\"hpo-HP.580003306\"> </a></td><td>Spinal rigidity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002068<a name=\"hpo-HP.580002068\"> </a></td><td>Neuromuscular dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001002<a name=\"hpo-HP.580001002\"> </a></td><td>obsolete Decreased subcutaneous fat</td></tr><tr><td style=\"white-space:nowrap\">HP:0002880<a name=\"hpo-HP.580002880\"> </a></td><td>obsolete Respiratory difficulties</td></tr><tr><td style=\"white-space:nowrap\">HP:0006829<a name=\"hpo-HP.580006829\"> </a></td><td>Severe muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011448<a name=\"hpo-HP.580011448\"> </a></td><td>Ankle clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0003487<a name=\"hpo-HP.580003487\"> </a></td><td>Babinski sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0002378<a name=\"hpo-HP.580002378\"> </a></td><td>Hand tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002747<a name=\"hpo-HP.580002747\"> </a></td><td>Respiratory insufficiency due to muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002579<a name=\"hpo-HP.580002579\"> </a></td><td>Gastrointestinal dysmotility</td></tr><tr><td style=\"white-space:nowrap\">HP:0001041<a name=\"hpo-HP.580001041\"> </a></td><td>Facial erythema</td></tr><tr><td style=\"white-space:nowrap\">HP:0040180<a name=\"hpo-HP.580040180\"> </a></td><td>Hyperkeratosis pilaris</td></tr><tr><td style=\"white-space:nowrap\">HP:0001382<a name=\"hpo-HP.580001382\"> </a></td><td>Joint hypermobility</td></tr><tr><td style=\"white-space:nowrap\">HP:0003722<a name=\"hpo-HP.580003722\"> </a></td><td>Neck flexor weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003323<a name=\"hpo-HP.580003323\"> </a></td><td>Progressive muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002380<a name=\"hpo-HP.580002380\"> </a></td><td>Fasciculations</td></tr><tr><td style=\"white-space:nowrap\">HP:0012785<a name=\"hpo-HP.580012785\"> </a></td><td>Flexion contracture of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0007936<a name=\"hpo-HP.580007936\"> </a></td><td>Restrictive external ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030319<a name=\"hpo-HP.580030319\"> </a></td><td>Weakness of facial musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0008936<a name=\"hpo-HP.580008936\"> </a></td><td>Muscular hypotonia of the trunk</td></tr><tr><td style=\"white-space:nowrap\">HP:0030230<a name=\"hpo-HP.580030230\"> </a></td><td>Central core regions in muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0011471<a name=\"hpo-HP.580011471\"> </a></td><td>Gastrostomy tube feeding in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001290<a name=\"hpo-HP.580001290\"> </a></td><td>Generalized hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002421<a name=\"hpo-HP.580002421\"> </a></td><td>Poor head control</td></tr><tr><td style=\"white-space:nowrap\">HP:0010301<a name=\"hpo-HP.580010301\"> </a></td><td>Spinal dysraphism</td></tr><tr><td style=\"white-space:nowrap\">HP:0004303<a name=\"hpo-HP.580004303\"> </a></td><td>Abnormal muscle fiber morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009046<a name=\"hpo-HP.580009046\"> </a></td><td>Difficulty running</td></tr><tr><td style=\"white-space:nowrap\">HP:0003715<a name=\"hpo-HP.580003715\"> </a></td><td>Myofibrillar myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000467<a name=\"hpo-HP.580000467\"> </a></td><td>Neck muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001999<a name=\"hpo-HP.580001999\"> </a></td><td>Abnormal facial shape</td></tr><tr><td style=\"white-space:nowrap\">HP:0002751<a name=\"hpo-HP.580002751\"> </a></td><td>Kyphoscoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030223<a name=\"hpo-HP.580030223\"> </a></td><td>Perseveration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002344<a name=\"hpo-HP.580002344\"> </a></td><td>Progressive neurologic deterioration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002522<a name=\"hpo-HP.580002522\"> </a></td><td>Areflexia of lower limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0003805<a name=\"hpo-HP.580003805\"> </a></td><td>Rimmed vacuoles</td></tr><tr><td style=\"white-space:nowrap\">HP:0005781<a name=\"hpo-HP.580005781\"> </a></td><td>Contractures of the large joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0040083<a name=\"hpo-HP.580040083\"> </a></td><td>Toe walking</td></tr><tr><td style=\"white-space:nowrap\">HP:0003749<a name=\"hpo-HP.580003749\"> </a></td><td>Pelvic girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0012444<a name=\"hpo-HP.580012444\"> </a></td><td>Brain atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003738<a name=\"hpo-HP.580003738\"> </a></td><td>Exercise-induced myalgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003756<a name=\"hpo-HP.580003756\"> </a></td><td>Skeletal myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002492<a name=\"hpo-HP.580002492\"> </a></td><td>Morphological abnormality of the corticospinal tract</td></tr><tr><td style=\"white-space:nowrap\">HP:0100302<a name=\"hpo-HP.580100302\"> </a></td><td>Muscle fiber tubuloreticular inclusions</td></tr><tr><td style=\"white-space:nowrap\">HP:0006817<a name=\"hpo-HP.580006817\"> </a></td><td>Aplasia/Hypoplasia of the cerebellar vermis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003473<a name=\"hpo-HP.580003473\"> </a></td><td>Fatigable weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002077<a name=\"hpo-HP.580002077\"> </a></td><td>Migraine with aura</td></tr><tr><td style=\"white-space:nowrap\">HP:0100559<a name=\"hpo-HP.580100559\"> </a></td><td>Lower limb asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0002079<a name=\"hpo-HP.580002079\"> </a></td><td>Hypoplasia of the corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002804<a name=\"hpo-HP.580002804\"> </a></td><td>Arthrogryposis multiplex congenita</td></tr><tr><td style=\"white-space:nowrap\">HP:0011623<a name=\"hpo-HP.580011623\"> </a></td><td>Muscular ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002191<a name=\"hpo-HP.580002191\"> </a></td><td>Progressive spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003390<a name=\"hpo-HP.580003390\"> </a></td><td>Sensory axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006986<a name=\"hpo-HP.580006986\"> </a></td><td>Upper limb spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002464<a name=\"hpo-HP.580002464\"> </a></td><td>Spastic dysarthria</td></tr><tr><td style=\"white-space:nowrap\">HP:0001308<a name=\"hpo-HP.580001308\"> </a></td><td>Tongue fasciculations</td></tr><tr><td style=\"white-space:nowrap\">HP:0007010<a name=\"hpo-HP.580007010\"> </a></td><td>Poor fine motor coordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0003737<a name=\"hpo-HP.580003737\"> </a></td><td>Mitochondrial myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0008012<a name=\"hpo-HP.580008012\"> </a></td><td>obsolete Congenital myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008872<a name=\"hpo-HP.580008872\"> </a></td><td>Feeding difficulties in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005750<a name=\"hpo-HP.580005750\"> </a></td><td>Contractures of the joints of the lower limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0009067<a name=\"hpo-HP.580009067\"> </a></td><td>Progressive spinal muscular atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001623<a name=\"hpo-HP.580001623\"> </a></td><td>Breech presentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001374<a name=\"hpo-HP.580001374\"> </a></td><td>Congenital hip dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002359<a name=\"hpo-HP.580002359\"> </a></td><td>Frequent falls</td></tr><tr><td style=\"white-space:nowrap\">HP:0003803<a name=\"hpo-HP.580003803\"> </a></td><td>Type 1 muscle fiber predominance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011410<a name=\"hpo-HP.580011410\"> </a></td><td>Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0008947<a name=\"hpo-HP.580008947\"> </a></td><td>Infantile muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100501<a name=\"hpo-HP.580100501\"> </a></td><td>Recurrent bronchiolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003789<a name=\"hpo-HP.580003789\"> </a></td><td>Minicore myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000544<a name=\"hpo-HP.580000544\"> </a></td><td>External ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001605<a name=\"hpo-HP.580001605\"> </a></td><td>Vocal cord paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003712<a name=\"hpo-HP.580003712\"> </a></td><td>Skeletal muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0012507<a name=\"hpo-HP.580012507\"> </a></td><td>Weakness of orbicularis oculi muscle</td></tr><tr><td style=\"white-space:nowrap\">HP:0009816<a name=\"hpo-HP.580009816\"> </a></td><td>Lower limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0008935<a name=\"hpo-HP.580008935\"> </a></td><td>Generalized neonatal hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003484<a name=\"hpo-HP.580003484\"> </a></td><td>Upper limb muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0008331<a name=\"hpo-HP.580008331\"> </a></td><td>Elevated creatine kinase after exercise</td></tr><tr><td style=\"white-space:nowrap\">HP:0001315<a name=\"hpo-HP.580001315\"> </a></td><td>Reduced tendon reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0012473<a name=\"hpo-HP.580012473\"> </a></td><td>Tongue atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003273<a name=\"hpo-HP.580003273\"> </a></td><td>Hip contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0006380<a name=\"hpo-HP.580006380\"> </a></td><td>Knee flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0003752<a name=\"hpo-HP.580003752\"> </a></td><td>Episodic flaccid weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0100298<a name=\"hpo-HP.580100298\"> </a></td><td>Motheaten muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0003693<a name=\"hpo-HP.580003693\"> </a></td><td>Distal amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002167<a name=\"hpo-HP.580002167\"> </a></td><td>Neurological speech impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0003388<a name=\"hpo-HP.580003388\"> </a></td><td>Easy fatigability</td></tr><tr><td style=\"white-space:nowrap\">HP:0001348<a name=\"hpo-HP.580001348\"> </a></td><td>Brisk reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0003445<a name=\"hpo-HP.580003445\"> </a></td><td>EMG: neuropathic changes</td></tr><tr><td style=\"white-space:nowrap\">HP:0009063<a name=\"hpo-HP.580009063\"> </a></td><td>Progressive distal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003720<a name=\"hpo-HP.580003720\"> </a></td><td>Generalized muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002493<a name=\"hpo-HP.580002493\"> </a></td><td>Upper motor neuron dysfunction</td></tr><tr><td style=\"white-space:nowrap\">HP:0012448<a name=\"hpo-HP.580012448\"> </a></td><td>Delayed myelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0001338<a name=\"hpo-HP.580001338\"> </a></td><td>Partial agenesis of the corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0006879<a name=\"hpo-HP.580006879\"> </a></td><td>Pontocerebellar atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0200101<a name=\"hpo-HP.580200101\"> </a></td><td>Decreased/absent ankle reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0009020<a name=\"hpo-HP.580009020\"> </a></td><td>Exercise-induced muscle fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002067<a name=\"hpo-HP.580002067\"> </a></td><td>Bradykinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012751<a name=\"hpo-HP.580012751\"> </a></td><td>Abnormal basal ganglia MRI signal intensity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003355<a name=\"hpo-HP.580003355\"> </a></td><td>Aminoaciduria</td></tr><tr><td style=\"white-space:nowrap\">HP:0012450<a name=\"hpo-HP.580012450\"> </a></td><td>Chronic constipation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011834<a name=\"hpo-HP.580011834\"> </a></td><td>Moyamoya phenomenon</td></tr><tr><td style=\"white-space:nowrap\">HP:0001297<a name=\"hpo-HP.580001297\"> </a></td><td>Stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0200049<a name=\"hpo-HP.580200049\"> </a></td><td>Upper limb hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008981<a name=\"hpo-HP.580008981\"> </a></td><td>Calf muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006785<a name=\"hpo-HP.580006785\"> </a></td><td>Limb-girdle muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006957<a name=\"hpo-HP.580006957\"> </a></td><td>Loss of ability to walk</td></tr><tr><td style=\"white-space:nowrap\">HP:0030098<a name=\"hpo-HP.580030098\"> </a></td><td>Reduced muscle dystrophin expression</td></tr><tr><td style=\"white-space:nowrap\">HP:0030115<a name=\"hpo-HP.580030115\"> </a></td><td>Reduced muscle fiber dysferlin</td></tr><tr><td style=\"white-space:nowrap\">HP:0002058<a name=\"hpo-HP.580002058\"> </a></td><td>Myopathic facies</td></tr><tr><td style=\"white-space:nowrap\">HP:0007858<a name=\"hpo-HP.580007858\"> </a></td><td>Chorioretinal lacunae</td></tr><tr><td style=\"white-space:nowrap\">HP:0006657<a name=\"hpo-HP.580006657\"> </a></td><td>Hypoplasia of first ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0007165<a name=\"hpo-HP.580007165\"> </a></td><td>Periventricular heterotopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0009779<a name=\"hpo-HP.580009779\"> </a></td><td>3-4 toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010665<a name=\"hpo-HP.580010665\"> </a></td><td>Bilateral coxa valga</td></tr><tr><td style=\"white-space:nowrap\">HP:0007598<a name=\"hpo-HP.580007598\"> </a></td><td>Bilateral single transverse palmar creases</td></tr><tr><td style=\"white-space:nowrap\">HP:0006101<a name=\"hpo-HP.580006101\"> </a></td><td>Finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010511<a name=\"hpo-HP.580010511\"> </a></td><td>Long toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002370<a name=\"hpo-HP.580002370\"> </a></td><td>Poor coordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0000480<a name=\"hpo-HP.580000480\"> </a></td><td>Retinal coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001770<a name=\"hpo-HP.580001770\"> </a></td><td>Toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010851<a name=\"hpo-HP.580010851\"> </a></td><td>EEG with burst suppression</td></tr><tr><td style=\"white-space:nowrap\">HP:0002791<a name=\"hpo-HP.580002791\"> </a></td><td>Hypoventilation</td></tr><tr><td style=\"white-space:nowrap\">HP:0040075<a name=\"hpo-HP.580040075\"> </a></td><td>Hypopituitarism</td></tr><tr><td style=\"white-space:nowrap\">HP:0012506<a name=\"hpo-HP.580012506\"> </a></td><td>Small pituitary gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000538<a name=\"hpo-HP.580000538\"> </a></td><td>Pseudopapilledema</td></tr><tr><td style=\"white-space:nowrap\">HP:0012717<a name=\"hpo-HP.580012717\"> </a></td><td>Severe conductive hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001370<a name=\"hpo-HP.580001370\"> </a></td><td>Rheumatoid arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000016<a name=\"hpo-HP.580000016\"> </a></td><td>Urinary retention</td></tr><tr><td style=\"white-space:nowrap\">HP:0012537<a name=\"hpo-HP.580012537\"> </a></td><td>Food intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011297<a name=\"hpo-HP.580011297\"> </a></td><td>Abnormal digit morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001273<a name=\"hpo-HP.580001273\"> </a></td><td>Abnormal corpus callosum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0030148<a name=\"hpo-HP.580030148\"> </a></td><td>Heart murmur</td></tr><tr><td style=\"white-space:nowrap\">HP:0045018<a name=\"hpo-HP.580045018\"> </a></td><td>Partial duplication of eyebrows</td></tr><tr><td style=\"white-space:nowrap\">HP:0008998<a name=\"hpo-HP.580008998\"> </a></td><td>Pectoralis hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001707<a name=\"hpo-HP.580001707\"> </a></td><td>Abnormal right ventricle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001540<a name=\"hpo-HP.580001540\"> </a></td><td>Diastasis recti</td></tr><tr><td style=\"white-space:nowrap\">HP:0100693<a name=\"hpo-HP.580100693\"> </a></td><td>Iridodonesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002265<a name=\"hpo-HP.580002265\"> </a></td><td>Large fleshy ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001132<a name=\"hpo-HP.580001132\"> </a></td><td>Lens subluxation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004927<a name=\"hpo-HP.580004927\"> </a></td><td>Pulmonary artery dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005619<a name=\"hpo-HP.580005619\"> </a></td><td>Thoracolumbar kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008619<a name=\"hpo-HP.580008619\"> </a></td><td>Bilateral sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001045<a name=\"hpo-HP.580001045\"> </a></td><td>Vitiligo</td></tr><tr><td style=\"white-space:nowrap\">HP:0009124<a name=\"hpo-HP.580009124\"> </a></td><td>Abnormal adipose tissue morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002979<a name=\"hpo-HP.580002979\"> </a></td><td>Bowing of the legs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000455<a name=\"hpo-HP.580000455\"> </a></td><td>Broad nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001007<a name=\"hpo-HP.580001007\"> </a></td><td>Hirsutism</td></tr><tr><td style=\"white-space:nowrap\">HP:0010314<a name=\"hpo-HP.580010314\"> </a></td><td>Premature thelarche</td></tr><tr><td style=\"white-space:nowrap\">HP:0000075<a name=\"hpo-HP.580000075\"> </a></td><td>Renal duplication</td></tr><tr><td style=\"white-space:nowrap\">HP:0000368<a name=\"hpo-HP.580000368\"> </a></td><td>Low-set, posteriorly rotated ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001052<a name=\"hpo-HP.580001052\"> </a></td><td>Nevus flammeus</td></tr><tr><td style=\"white-space:nowrap\">HP:0200048<a name=\"hpo-HP.580200048\"> </a></td><td>Cyanotic episode</td></tr><tr><td style=\"white-space:nowrap\">HP:0001902<a name=\"hpo-HP.580001902\"> </a></td><td>Giant platelets</td></tr><tr><td style=\"white-space:nowrap\">HP:0030043<a name=\"hpo-HP.580030043\"> </a></td><td>Hip subluxation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002938<a name=\"hpo-HP.580002938\"> </a></td><td>Lumbar hyperlordosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030084<a name=\"hpo-HP.580030084\"> </a></td><td>Clinodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005560<a name=\"hpo-HP.580005560\"> </a></td><td>Imbalanced hemoglobin synthesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001539<a name=\"hpo-HP.580001539\"> </a></td><td>Omphalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0009778<a name=\"hpo-HP.580009778\"> </a></td><td>Short thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002277<a name=\"hpo-HP.580002277\"> </a></td><td>Horner syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0011701<a name=\"hpo-HP.580011701\"> </a></td><td>Multifocal atrial tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005274<a name=\"hpo-HP.580005274\"> </a></td><td>Prominent nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001262<a name=\"hpo-HP.580001262\"> </a></td><td>Excessive daytime somnolence</td></tr><tr><td style=\"white-space:nowrap\">HP:0001285<a name=\"hpo-HP.580001285\"> </a></td><td>Spastic tetraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012171<a name=\"hpo-HP.580012171\"> </a></td><td>Stereotypical hand wringing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002518<a name=\"hpo-HP.580002518\"> </a></td><td>Abnormality of the periventricular white matter</td></tr><tr><td style=\"white-space:nowrap\">HP:0005692<a name=\"hpo-HP.580005692\"> </a></td><td>Joint hyperflexibility</td></tr><tr><td style=\"white-space:nowrap\">HP:0007440<a name=\"hpo-HP.580007440\"> </a></td><td>Generalized hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001805<a name=\"hpo-HP.580001805\"> </a></td><td>Onychogryposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011945<a name=\"hpo-HP.580011945\"> </a></td><td>Bronchiolitis obliterans organizing pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003763<a name=\"hpo-HP.580003763\"> </a></td><td>Bruxism</td></tr><tr><td style=\"white-space:nowrap\">HP:0010500<a name=\"hpo-HP.580010500\"> </a></td><td>Hyperextensibility of the knee</td></tr><tr><td style=\"white-space:nowrap\">HP:0040115<a name=\"hpo-HP.580040115\"> </a></td><td>Abnormality of the Eustachian tube</td></tr><tr><td style=\"white-space:nowrap\">HP:0008751<a name=\"hpo-HP.580008751\"> </a></td><td>Laryngeal cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0000403<a name=\"hpo-HP.580000403\"> </a></td><td>Recurrent otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0001787<a name=\"hpo-HP.580001787\"> </a></td><td>Abnormal delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0002571<a name=\"hpo-HP.580002571\"> </a></td><td>Achalasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002615<a name=\"hpo-HP.580002615\"> </a></td><td>Hypotension</td></tr><tr><td style=\"white-space:nowrap\">HP:0003550<a name=\"hpo-HP.580003550\"> </a></td><td>Predominantly lower limb lymphedema</td></tr><tr><td style=\"white-space:nowrap\">HP:0030363<a name=\"hpo-HP.580030363\"> </a></td><td>Primary Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0001727<a name=\"hpo-HP.580001727\"> </a></td><td>Thromboembolic stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0100603<a name=\"hpo-HP.580100603\"> </a></td><td>Toxemia of pregnancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0010836<a name=\"hpo-HP.580010836\"> </a></td><td>Abnormal circulating copper concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0000356<a name=\"hpo-HP.580000356\"> </a></td><td>Abnormality of the outer ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0002197<a name=\"hpo-HP.580002197\"> </a></td><td>Generalized-onset seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011436<a name=\"hpo-HP.580011436\"> </a></td><td>Abnormal maternal serum screening</td></tr><tr><td style=\"white-space:nowrap\">HP:0003517<a name=\"hpo-HP.580003517\"> </a></td><td>Birth length greater than 97th percentile</td></tr><tr><td style=\"white-space:nowrap\">HP:0003561<a name=\"hpo-HP.580003561\"> </a></td><td>Birth length less than 3rd percentile</td></tr><tr><td style=\"white-space:nowrap\">HP:0012188<a name=\"hpo-HP.580012188\"> </a></td><td>Hyperemesis gravidarum</td></tr><tr><td style=\"white-space:nowrap\">HP:0010519<a name=\"hpo-HP.580010519\"> </a></td><td>Increased fetal movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0030244<a name=\"hpo-HP.580030244\"> </a></td><td>Maternal fever in pregnancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0008071<a name=\"hpo-HP.580008071\"> </a></td><td>Maternal hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0100622<a name=\"hpo-HP.580100622\"> </a></td><td>Maternal seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011438<a name=\"hpo-HP.580011438\"> </a></td><td>Maternal teratogenic exposure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001998<a name=\"hpo-HP.580001998\"> </a></td><td>Neonatal hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0040187<a name=\"hpo-HP.580040187\"> </a></td><td>Neonatal sepsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002033<a name=\"hpo-HP.580002033\"> </a></td><td>Poor suck</td></tr><tr><td style=\"white-space:nowrap\">HP:0006579<a name=\"hpo-HP.580006579\"> </a></td><td>Prolonged neonatal jaundice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001724<a name=\"hpo-HP.580001724\"> </a></td><td>obsolete Aortic dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010621<a name=\"hpo-HP.580010621\"> </a></td><td>Cutaneous syndactyly of toes</td></tr><tr><td style=\"white-space:nowrap\">HP:0001880<a name=\"hpo-HP.580001880\"> </a></td><td>Eosinophilia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000162<a name=\"hpo-HP.580000162\"> </a></td><td>Glossoptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100578<a name=\"hpo-HP.580100578\"> </a></td><td>Lipoatrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002562<a name=\"hpo-HP.580002562\"> </a></td><td>Low-set nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0012893<a name=\"hpo-HP.580012893\"> </a></td><td>Neck muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001027<a name=\"hpo-HP.580001027\"> </a></td><td>Soft, doughy skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0100738<a name=\"hpo-HP.580100738\"> </a></td><td>Abnormal eating behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0007328<a name=\"hpo-HP.580007328\"> </a></td><td>Impaired pain sensation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002878<a name=\"hpo-HP.580002878\"> </a></td><td>Respiratory failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001776<a name=\"hpo-HP.580001776\"> </a></td><td>Bilateral talipes equinovarus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001360<a name=\"hpo-HP.580001360\"> </a></td><td>Holoprosencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001973<a name=\"hpo-HP.580001973\"> </a></td><td>Autoimmune thrombocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100749<a name=\"hpo-HP.580100749\"> </a></td><td>Chest pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0012531<a name=\"hpo-HP.580012531\"> </a></td><td>Pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0007585<a name=\"hpo-HP.580007585\"> </a></td><td>Skin fragility with non-scarring blistering</td></tr><tr><td style=\"white-space:nowrap\">HP:0002108<a name=\"hpo-HP.580002108\"> </a></td><td>Spontaneous pneumothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0006562<a name=\"hpo-HP.580006562\"> </a></td><td>Viral hepatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012647<a name=\"hpo-HP.580012647\"> </a></td><td>Abnormal inflammatory response</td></tr><tr><td style=\"white-space:nowrap\">HP:0012088<a name=\"hpo-HP.580012088\"> </a></td><td>Abnormal urinary odor</td></tr><tr><td style=\"white-space:nowrap\">HP:0011458<a name=\"hpo-HP.580011458\"> </a></td><td>Abdominal symptom</td></tr><tr><td style=\"white-space:nowrap\">HP:0002829<a name=\"hpo-HP.580002829\"> </a></td><td>Arthralgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010783<a name=\"hpo-HP.580010783\"> </a></td><td>Erythema</td></tr><tr><td style=\"white-space:nowrap\">HP:0010307<a name=\"hpo-HP.580010307\"> </a></td><td>Stridor</td></tr><tr><td style=\"white-space:nowrap\">HP:0001269<a name=\"hpo-HP.580001269\"> </a></td><td>Hemiparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006532<a name=\"hpo-HP.580006532\"> </a></td><td>Recurrent pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002580<a name=\"hpo-HP.580002580\"> </a></td><td>Volvulus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012387<a name=\"hpo-HP.580012387\"> </a></td><td>Bronchitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001266<a name=\"hpo-HP.580001266\"> </a></td><td>Choreoathetosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001531<a name=\"hpo-HP.580001531\"> </a></td><td>Failure to thrive in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011470<a name=\"hpo-HP.580011470\"> </a></td><td>Nasogastric tube feeding in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001361<a name=\"hpo-HP.580001361\"> </a></td><td>Nystagmus-induced head nodding</td></tr><tr><td style=\"white-space:nowrap\">HP:0001997<a name=\"hpo-HP.580001997\"> </a></td><td>Gout</td></tr><tr><td style=\"white-space:nowrap\">HP:0000965<a name=\"hpo-HP.580000965\"> </a></td><td>Cutis marmorata</td></tr><tr><td style=\"white-space:nowrap\">HP:0010316<a name=\"hpo-HP.580010316\"> </a></td><td>Ebstein anomaly of the tricuspid valve</td></tr><tr><td style=\"white-space:nowrap\">HP:0010543<a name=\"hpo-HP.580010543\"> </a></td><td>Opsoclonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0007704<a name=\"hpo-HP.580007704\"> </a></td><td>Paroxysmal involuntary eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0030364<a name=\"hpo-HP.580030364\"> </a></td><td>Secondary Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0007738<a name=\"hpo-HP.580007738\"> </a></td><td>Uncontrolled eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0030366<a name=\"hpo-HP.580030366\"> </a></td><td>Delivery by Odon device</td></tr><tr><td style=\"white-space:nowrap\">HP:0011411<a name=\"hpo-HP.580011411\"> </a></td><td>Forceps delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0030369<a name=\"hpo-HP.580030369\"> </a></td><td>Induced vaginal delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0005268<a name=\"hpo-HP.580005268\"> </a></td><td>Spontaneous abortion</td></tr><tr><td style=\"white-space:nowrap\">HP:0030365<a name=\"hpo-HP.580030365\"> </a></td><td>Vaginal birth after Caesarian</td></tr><tr><td style=\"white-space:nowrap\">HP:0011412<a name=\"hpo-HP.580011412\"> </a></td><td>Ventouse delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0002572<a name=\"hpo-HP.580002572\"> </a></td><td>Episodic vomiting</td></tr><tr><td style=\"white-space:nowrap\">HP:0030350<a name=\"hpo-HP.580030350\"> </a></td><td>Erythematous papule</td></tr><tr><td style=\"white-space:nowrap\">HP:0001386<a name=\"hpo-HP.580001386\"> </a></td><td>Joint swelling</td></tr><tr><td style=\"white-space:nowrap\">HP:0000147<a name=\"hpo-HP.580000147\"> </a></td><td>Polycystic ovaries</td></tr><tr><td style=\"white-space:nowrap\">HP:0012412<a name=\"hpo-HP.580012412\"> </a></td><td>Premature adrenarche</td></tr><tr><td style=\"white-space:nowrap\">HP:0004411<a name=\"hpo-HP.580004411\"> </a></td><td>Deviated nasal septum</td></tr><tr><td style=\"white-space:nowrap\">HP:0040183<a name=\"hpo-HP.580040183\"> </a></td><td>Encopresis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100507<a name=\"hpo-HP.580100507\"> </a></td><td>Reduced blood folate concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0007011<a name=\"hpo-HP.580007011\"> </a></td><td>Fourth cranial nerve palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000375<a name=\"hpo-HP.580000375\"> </a></td><td>Abnormal cochlea morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009911<a name=\"hpo-HP.580009911\"> </a></td><td>Abnormal temporal bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000081<a name=\"hpo-HP.580000081\"> </a></td><td>Duplicated collecting system</td></tr><tr><td style=\"white-space:nowrap\">HP:0006894<a name=\"hpo-HP.580006894\"> </a></td><td>Hypoplastic olfactory lobes</td></tr><tr><td style=\"white-space:nowrap\">HP:0011380<a name=\"hpo-HP.580011380\"> </a></td><td>Morphological abnormality of the semicircular canal</td></tr><tr><td style=\"white-space:nowrap\">HP:0000110<a name=\"hpo-HP.580000110\"> </a></td><td>Renal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030025<a name=\"hpo-HP.580030025\"> </a></td><td>Auricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0010044<a name=\"hpo-HP.580010044\"> </a></td><td>Short 4th metacarpal</td></tr><tr><td style=\"white-space:nowrap\">HP:0010047<a name=\"hpo-HP.580010047\"> </a></td><td>Short 5th metacarpal</td></tr><tr><td style=\"white-space:nowrap\">HP:0000201<a name=\"hpo-HP.580000201\"> </a></td><td>Pierre-Robin sequence</td></tr><tr><td style=\"white-space:nowrap\">HP:0100837<a name=\"hpo-HP.580100837\"> </a></td><td>Atrophodermia vermiculata</td></tr><tr><td style=\"white-space:nowrap\">HP:0002673<a name=\"hpo-HP.580002673\"> </a></td><td>Coxa valga</td></tr><tr><td style=\"white-space:nowrap\">HP:0001476<a name=\"hpo-HP.580001476\"> </a></td><td>Delayed closure of the anterior fontanelle</td></tr><tr><td style=\"white-space:nowrap\">HP:0011069<a name=\"hpo-HP.580011069\"> </a></td><td>Increased number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009879<a name=\"hpo-HP.580009879\"> </a></td><td>Simplified gyral pattern</td></tr><tr><td style=\"white-space:nowrap\">HP:0006315<a name=\"hpo-HP.580006315\"> </a></td><td>Single median maxillary incisor</td></tr><tr><td style=\"white-space:nowrap\">HP:0001194<a name=\"hpo-HP.580001194\"> </a></td><td>Abnormalities of placenta or umbilical cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0100767<a name=\"hpo-HP.580100767\"> </a></td><td>Abnormal placenta morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0006543<a name=\"hpo-HP.580006543\"> </a></td><td>Cardiorespiratory arrest</td></tr><tr><td style=\"white-space:nowrap\">HP:0003074<a name=\"hpo-HP.580003074\"> </a></td><td>Hyperglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000842<a name=\"hpo-HP.580000842\"> </a></td><td>Hyperinsulinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011951<a name=\"hpo-HP.580011951\"> </a></td><td>Aspiration pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006528<a name=\"hpo-HP.580006528\"> </a></td><td>Chronic lung disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0002383<a name=\"hpo-HP.580002383\"> </a></td><td>Encephalitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000388<a name=\"hpo-HP.580000388\"> </a></td><td>Otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0002530<a name=\"hpo-HP.580002530\"> </a></td><td>Axial dystonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002780<a name=\"hpo-HP.580002780\"> </a></td><td>Bronchomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008755<a name=\"hpo-HP.580008755\"> </a></td><td>Laryngotracheomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000308<a name=\"hpo-HP.580000308\"> </a></td><td>Microretrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002786<a name=\"hpo-HP.580002786\"> </a></td><td>Tracheobronchomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012389<a name=\"hpo-HP.580012389\"> </a></td><td>Appendicular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011323<a name=\"hpo-HP.580011323\"> </a></td><td>Cleft of chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000417<a name=\"hpo-HP.580000417\"> </a></td><td>Slender nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0001863<a name=\"hpo-HP.580001863\"> </a></td><td>Toe clinodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0008386<a name=\"hpo-HP.580008386\"> </a></td><td>Aplasia/Hypoplasia of the nails</td></tr><tr><td style=\"white-space:nowrap\">HP:0006989<a name=\"hpo-HP.580006989\"> </a></td><td>Dysplastic corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0100954<a name=\"hpo-HP.580100954\"> </a></td><td>Open operculum</td></tr><tr><td style=\"white-space:nowrap\">HP:0004482<a name=\"hpo-HP.580004482\"> </a></td><td>Relative macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:3000033<a name=\"hpo-HP.583000033\"> </a></td><td>Abnormal nasopharyngeal adenoid morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009062<a name=\"hpo-HP.580009062\"> </a></td><td>Infantile axial hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002189<a name=\"hpo-HP.580002189\"> </a></td><td>obsolete Excessive daytime sleepiness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002141<a name=\"hpo-HP.580002141\"> </a></td><td>Gait imbalance</td></tr><tr><td style=\"white-space:nowrap\">HP:0012734<a name=\"hpo-HP.580012734\"> </a></td><td>Ketotic hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005968<a name=\"hpo-HP.580005968\"> </a></td><td>Temperature instability</td></tr><tr><td style=\"white-space:nowrap\">HP:0012538<a name=\"hpo-HP.580012538\"> </a></td><td>Gluten intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0000979<a name=\"hpo-HP.580000979\"> </a></td><td>Purpura</td></tr><tr><td style=\"white-space:nowrap\">HP:0001988<a name=\"hpo-HP.580001988\"> </a></td><td>Recurrent hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001488<a name=\"hpo-HP.580001488\"> </a></td><td>Bilateral ptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011229<a name=\"hpo-HP.580011229\"> </a></td><td>Broad eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0004440<a name=\"hpo-HP.580004440\"> </a></td><td>Coronal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004453<a name=\"hpo-HP.580004453\"> </a></td><td>Overfolding of the superior helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0012547<a name=\"hpo-HP.580012547\"> </a></td><td>Abnormal involuntary eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0100814<a name=\"hpo-HP.580100814\"> </a></td><td>Blue nevus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010751<a name=\"hpo-HP.580010751\"> </a></td><td>Dimple chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0007087<a name=\"hpo-HP.580007087\"> </a></td><td>obsolete Involuntary jerking movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0012498<a name=\"hpo-HP.580012498\"> </a></td><td>Nuchal cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0002472<a name=\"hpo-HP.580002472\"> </a></td><td>Small cerebral cortex</td></tr><tr><td style=\"white-space:nowrap\">HP:0100307<a name=\"hpo-HP.580100307\"> </a></td><td>Cerebellar hemisphere hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002151<a name=\"hpo-HP.580002151\"> </a></td><td>Increased serum lactate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001698<a name=\"hpo-HP.580001698\"> </a></td><td>Pericardial effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0006903<a name=\"hpo-HP.580006903\"> </a></td><td>Congenital peripheral neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006895<a name=\"hpo-HP.580006895\"> </a></td><td>Lower limb hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002744<a name=\"hpo-HP.580002744\"> </a></td><td>Bilateral cleft lip and palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0010664<a name=\"hpo-HP.580010664\"> </a></td><td>Fusion of the left and right thalami</td></tr><tr><td style=\"white-space:nowrap\">HP:0000327<a name=\"hpo-HP.580000327\"> </a></td><td>Hypoplasia of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0000474<a name=\"hpo-HP.580000474\"> </a></td><td>Thickened nuchal skin fold</td></tr><tr><td style=\"white-space:nowrap\">HP:0000105<a name=\"hpo-HP.580000105\"> </a></td><td>Enlarged kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0000113<a name=\"hpo-HP.580000113\"> </a></td><td>Polycystic kidney dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000104<a name=\"hpo-HP.580000104\"> </a></td><td>Renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001362<a name=\"hpo-HP.580001362\"> </a></td><td>Calvarial skull defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0008245<a name=\"hpo-HP.580008245\"> </a></td><td>Pituitary hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001552<a name=\"hpo-HP.580001552\"> </a></td><td>Barrel-shaped chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0006297<a name=\"hpo-HP.580006297\"> </a></td><td>Hypoplasia of dental enamel</td></tr><tr><td style=\"white-space:nowrap\">HP:0100023<a name=\"hpo-HP.580100023\"> </a></td><td>Recurrent hand flapping</td></tr><tr><td style=\"white-space:nowrap\">HP:0005518<a name=\"hpo-HP.580005518\"> </a></td><td>Increased mean corpuscular volume</td></tr><tr><td style=\"white-space:nowrap\">HP:0012418<a name=\"hpo-HP.580012418\"> </a></td><td>Hypoxemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100259<a name=\"hpo-HP.580100259\"> </a></td><td>Postaxial polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010814<a name=\"hpo-HP.580010814\"> </a></td><td>Abnormal position of hair whorl</td></tr><tr><td style=\"white-space:nowrap\">HP:0003764<a name=\"hpo-HP.580003764\"> </a></td><td>Nevus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000445<a name=\"hpo-HP.580000445\"> </a></td><td>Wide nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0010677<a name=\"hpo-HP.580010677\"> </a></td><td>Enuresis nocturna</td></tr><tr><td style=\"white-space:nowrap\">HP:0001510<a name=\"hpo-HP.580001510\"> </a></td><td>Growth delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0012428<a name=\"hpo-HP.580012428\"> </a></td><td>Prominent calcaneus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012471<a name=\"hpo-HP.580012471\"> </a></td><td>Thick vermilion border</td></tr><tr><td style=\"white-space:nowrap\">HP:0007110<a name=\"hpo-HP.580007110\"> </a></td><td>Central hypoventilation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010614<a name=\"hpo-HP.580010614\"> </a></td><td>Fibroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001034<a name=\"hpo-HP.580001034\"> </a></td><td>Hypermelanotic macule</td></tr><tr><td style=\"white-space:nowrap\">HP:0011365<a name=\"hpo-HP.580011365\"> </a></td><td>Patchy hypopigmentation of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0001920<a name=\"hpo-HP.580001920\"> </a></td><td>Renal artery stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002828<a name=\"hpo-HP.580002828\"> </a></td><td>Multiple joint contractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0002144<a name=\"hpo-HP.580002144\"> </a></td><td>Tethered cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0010964<a name=\"hpo-HP.580010964\"> </a></td><td>Abnormal circulating long-chain fatty-acid concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0010536<a name=\"hpo-HP.580010536\"> </a></td><td>Central sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0011262<a name=\"hpo-HP.580011262\"> </a></td><td>Crimped helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0040079<a name=\"hpo-HP.580040079\"> </a></td><td>Irregular dentition</td></tr><tr><td style=\"white-space:nowrap\">HP:0011481<a name=\"hpo-HP.580011481\"> </a></td><td>Abnormal lacrimal duct morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000220<a name=\"hpo-HP.580000220\"> </a></td><td>Velopharyngeal insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002153<a name=\"hpo-HP.580002153\"> </a></td><td>Hyperkalemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002148<a name=\"hpo-HP.580002148\"> </a></td><td>Hypophosphatemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012621<a name=\"hpo-HP.580012621\"> </a></td><td>Persistent cloaca</td></tr><tr><td style=\"white-space:nowrap\">HP:0000867<a name=\"hpo-HP.580000867\"> </a></td><td>Secondary hyperparathyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0003762<a name=\"hpo-HP.580003762\"> </a></td><td>Uterus didelphys</td></tr><tr><td style=\"white-space:nowrap\">HP:0100512<a name=\"hpo-HP.580100512\"> </a></td><td>Low levels of vitamin D</td></tr><tr><td style=\"white-space:nowrap\">HP:0012156<a name=\"hpo-HP.580012156\"> </a></td><td>Hemophagocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008209<a name=\"hpo-HP.580008209\"> </a></td><td>Premature ovarian insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0004349<a name=\"hpo-HP.580004349\"> </a></td><td>Reduced bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0001924<a name=\"hpo-HP.580001924\"> </a></td><td>Sideroblastic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011703<a name=\"hpo-HP.580011703\"> </a></td><td>Sinus tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010609<a name=\"hpo-HP.580010609\"> </a></td><td>Skin tags</td></tr><tr><td style=\"white-space:nowrap\">HP:0002725<a name=\"hpo-HP.580002725\"> </a></td><td>Systemic lupus erythematosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0003193<a name=\"hpo-HP.580003193\"> </a></td><td>Allergic rhinitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006896<a name=\"hpo-HP.580006896\"> </a></td><td>Hypnopompic hallucinations</td></tr><tr><td style=\"white-space:nowrap\">HP:0002524<a name=\"hpo-HP.580002524\"> </a></td><td>Cataplexy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005227<a name=\"hpo-HP.580005227\"> </a></td><td>Adenomatous colonic polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012173<a name=\"hpo-HP.580012173\"> </a></td><td>Orthostatic tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001271<a name=\"hpo-HP.580001271\"> </a></td><td>Polyneuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0009120<a name=\"hpo-HP.580009120\"> </a></td><td>Aplasia/Hypoplasia involving the sinuses</td></tr><tr><td style=\"white-space:nowrap\">HP:0000625<a name=\"hpo-HP.580000625\"> </a></td><td>Eyelid coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0009754<a name=\"hpo-HP.580009754\"> </a></td><td>Fibrous syngnathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012478<a name=\"hpo-HP.580012478\"> </a></td><td>Temporomandibular joint ankylosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001233<a name=\"hpo-HP.580001233\"> </a></td><td>2-3 finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000811<a name=\"hpo-HP.580000811\"> </a></td><td>Abnormal external genitalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005120<a name=\"hpo-HP.580005120\"> </a></td><td>Abnormal cardiac atrium morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008388<a name=\"hpo-HP.580008388\"> </a></td><td>Abnormal toenail morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011467<a name=\"hpo-HP.580011467\"> </a></td><td>Absent gallbladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0010760<a name=\"hpo-HP.580010760\"> </a></td><td>Absent toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001545<a name=\"hpo-HP.580001545\"> </a></td><td>Anteriorly placed anus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001640<a name=\"hpo-HP.580001640\"> </a></td><td>Cardiomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002990<a name=\"hpo-HP.580002990\"> </a></td><td>Fibular aplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004443<a name=\"hpo-HP.580004443\"> </a></td><td>Lambdoidal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008569<a name=\"hpo-HP.580008569\"> </a></td><td>Microtia, second degree</td></tr><tr><td style=\"white-space:nowrap\">HP:0006277<a name=\"hpo-HP.580006277\"> </a></td><td>Pancreatic hyperplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010445<a name=\"hpo-HP.580010445\"> </a></td><td>Primum atrial septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0011640<a name=\"hpo-HP.580011640\"> </a></td><td>Single coronary artery origin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011608<a name=\"hpo-HP.580011608\"> </a></td><td>Type II truncus arteriosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0011327<a name=\"hpo-HP.580011327\"> </a></td><td>Posterior plagiocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0007655<a name=\"hpo-HP.580007655\"> </a></td><td>Eversion of lateral third of lower eyelids</td></tr><tr><td style=\"white-space:nowrap\">HP:0010747<a name=\"hpo-HP.580010747\"> </a></td><td>Medial flaring of the eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0005957<a name=\"hpo-HP.580005957\"> </a></td><td>Breathing dysregulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000992<a name=\"hpo-HP.580000992\"> </a></td><td>Cutaneous photosensitivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0011995<a name=\"hpo-HP.580011995\"> </a></td><td>Atrial septal dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000377<a name=\"hpo-HP.580000377\"> </a></td><td>Abnormality of the pinna</td></tr><tr><td style=\"white-space:nowrap\">HP:0011266<a name=\"hpo-HP.580011266\"> </a></td><td>Microtia, first degree</td></tr><tr><td style=\"white-space:nowrap\">HP:0012650<a name=\"hpo-HP.580012650\"> </a></td><td>Perisylvian polymicrogyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0004970<a name=\"hpo-HP.580004970\"> </a></td><td>Ascending tubular aorta aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0008348<a name=\"hpo-HP.580008348\"> </a></td><td>Decreased circulating IgG2 level</td></tr><tr><td style=\"white-space:nowrap\">HP:0012115<a name=\"hpo-HP.580012115\"> </a></td><td>Hepatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006979<a name=\"hpo-HP.580006979\"> </a></td><td>Sleep-wake cycle disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0008587<a name=\"hpo-HP.580008587\"> </a></td><td>Mild neurosensory hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0006097<a name=\"hpo-HP.580006097\"> </a></td><td>3-4 finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005263<a name=\"hpo-HP.580005263\"> </a></td><td>Gastritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0200043<a name=\"hpo-HP.580200043\"> </a></td><td>Verrucae</td></tr><tr><td style=\"white-space:nowrap\">HP:0009600<a name=\"hpo-HP.580009600\"> </a></td><td>Flexion contracture of thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0010818<a name=\"hpo-HP.580010818\"> </a></td><td>Generalized tonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0002599<a name=\"hpo-HP.580002599\"> </a></td><td>Head titubation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002090<a name=\"hpo-HP.580002090\"> </a></td><td>Pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030423<a name=\"hpo-HP.580030423\"> </a></td><td>Splenic cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0030187<a name=\"hpo-HP.580030187\"> </a></td><td>Titubation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002375<a name=\"hpo-HP.580002375\"> </a></td><td>Hypokinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007166<a name=\"hpo-HP.580007166\"> </a></td><td>Paroxysmal dyskinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003077<a name=\"hpo-HP.580003077\"> </a></td><td>Hyperlipidemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000017<a name=\"hpo-HP.580000017\"> </a></td><td>Nocturia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100555<a name=\"hpo-HP.580100555\"> </a></td><td>Asymmetric growth</td></tr><tr><td style=\"white-space:nowrap\">HP:0011847<a name=\"hpo-HP.580011847\"> </a></td><td>Giant cell tumor of bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0000112<a name=\"hpo-HP.580000112\"> </a></td><td>Nephropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000246<a name=\"hpo-HP.580000246\"> </a></td><td>Sinusitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001012<a name=\"hpo-HP.580001012\"> </a></td><td>Multiple lipomas</td></tr><tr><td style=\"white-space:nowrap\">HP:0000851<a name=\"hpo-HP.580000851\"> </a></td><td>Congenital hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0002345<a name=\"hpo-HP.580002345\"> </a></td><td>Action tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002677<a name=\"hpo-HP.580002677\"> </a></td><td>Small foramen magnum</td></tr><tr><td style=\"white-space:nowrap\">HP:0011947<a name=\"hpo-HP.580011947\"> </a></td><td>Respiratory tract infection</td></tr><tr><td style=\"white-space:nowrap\">HP:0012151<a name=\"hpo-HP.580012151\"> </a></td><td>Hemothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0005988<a name=\"hpo-HP.580005988\"> </a></td><td>Congenital muscular torticollis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002329<a name=\"hpo-HP.580002329\"> </a></td><td>Drowsiness</td></tr><tr><td style=\"white-space:nowrap\">HP:0012395<a name=\"hpo-HP.580012395\"> </a></td><td>Seasonal allergy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011679<a name=\"hpo-HP.580011679\"> </a></td><td>Tetralogy of Fallot with pulmonary stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001864<a name=\"hpo-HP.580001864\"> </a></td><td>Clinodactyly of the 5th toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0006934<a name=\"hpo-HP.580006934\"> </a></td><td>Congenital nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0100355<a name=\"hpo-HP.580100355\"> </a></td><td>Contractures of the distal interphalangeal joint of the 5th toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0007894<a name=\"hpo-HP.580007894\"> </a></td><td>Hypopigmentation of the fundus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012377<a name=\"hpo-HP.580012377\"> </a></td><td>Hemianopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002354<a name=\"hpo-HP.580002354\"> </a></td><td>Memory impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000872<a name=\"hpo-HP.580000872\"> </a></td><td>Hashimoto thyroiditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002519<a name=\"hpo-HP.580002519\"> </a></td><td>Hypnagogic hallucinations</td></tr><tr><td style=\"white-space:nowrap\">HP:0010647<a name=\"hpo-HP.580010647\"> </a></td><td>Abnormal elasticity of skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0002592<a name=\"hpo-HP.580002592\"> </a></td><td>Gastric ulcer</td></tr><tr><td style=\"white-space:nowrap\">HP:0004938<a name=\"hpo-HP.580004938\"> </a></td><td>Tortuous cerebral arteries</td></tr><tr><td style=\"white-space:nowrap\">HP:0004948<a name=\"hpo-HP.580004948\"> </a></td><td>Vascular tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002516<a name=\"hpo-HP.580002516\"> </a></td><td>Increased intracranial pressure</td></tr><tr><td style=\"white-space:nowrap\">HP:0006460<a name=\"hpo-HP.580006460\"> </a></td><td>Increased laxity of ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0002317<a name=\"hpo-HP.580002317\"> </a></td><td>Unsteady gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0000182<a name=\"hpo-HP.580000182\"> </a></td><td>Movement abnormality of the tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0009887<a name=\"hpo-HP.580009887\"> </a></td><td>Abnormality of hair pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005824<a name=\"hpo-HP.580005824\"> </a></td><td>Clinodactyly of the 2nd toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002212<a name=\"hpo-HP.580002212\"> </a></td><td>Curly hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0009803<a name=\"hpo-HP.580009803\"> </a></td><td>Short phalanx of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0000572<a name=\"hpo-HP.580000572\"> </a></td><td>Visual loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0005216<a name=\"hpo-HP.580005216\"> </a></td><td>Impaired mastication</td></tr><tr><td style=\"white-space:nowrap\">HP:0000619<a name=\"hpo-HP.580000619\"> </a></td><td>Impaired convergence</td></tr><tr><td style=\"white-space:nowrap\">HP:0002403<a name=\"hpo-HP.580002403\"> </a></td><td>Positive Romberg sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0008744<a name=\"hpo-HP.580008744\"> </a></td><td>Abnormal aryepiglottic fold morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002374<a name=\"hpo-HP.580002374\"> </a></td><td>Diminished movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0008277<a name=\"hpo-HP.580008277\"> </a></td><td>Abnormal blood zinc concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0012781<a name=\"hpo-HP.580012781\"> </a></td><td>Mid-frequency hearing loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0100758<a name=\"hpo-HP.580100758\"> </a></td><td>Gangrene</td></tr><tr><td style=\"white-space:nowrap\">HP:0003256<a name=\"hpo-HP.580003256\"> </a></td><td>Abnormality of the coagulation cascade</td></tr><tr><td style=\"white-space:nowrap\">HP:0004387<a name=\"hpo-HP.580004387\"> </a></td><td>Enterocolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011029<a name=\"hpo-HP.580011029\"> </a></td><td>Internal hemorrhage</td></tr><tr><td style=\"white-space:nowrap\">HP:0011649<a name=\"hpo-HP.580011649\"> </a></td><td>Patent ductus arteriosus after premature birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0012050<a name=\"hpo-HP.580012050\"> </a></td><td>Anasarca</td></tr><tr><td style=\"white-space:nowrap\">HP:0001683<a name=\"hpo-HP.580001683\"> </a></td><td>Ectopia cordis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011682<a name=\"hpo-HP.580011682\"> </a></td><td>Perimembranous ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0010624<a name=\"hpo-HP.580010624\"> </a></td><td>Aplastic/hypoplastic toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002705<a name=\"hpo-HP.580002705\"> </a></td><td>High, narrow palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0011340<a name=\"hpo-HP.580011340\"> </a></td><td>Incomplete cleft of the upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0011613<a name=\"hpo-HP.580011613\"> </a></td><td>Interrupted aortic arch type B</td></tr><tr><td style=\"white-space:nowrap\">HP:0006167<a name=\"hpo-HP.580006167\"> </a></td><td>Prominent proximal interphalangeal joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0002918<a name=\"hpo-HP.580002918\"> </a></td><td>Hypermagnesemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011937<a name=\"hpo-HP.580011937\"> </a></td><td>Hypoplastic fifth toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0001067<a name=\"hpo-HP.580001067\"> </a></td><td>Neurofibromas</td></tr><tr><td style=\"white-space:nowrap\">HP:0011403<a name=\"hpo-HP.580011403\"> </a></td><td>Abnormal umbilical cord blood vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0003316<a name=\"hpo-HP.580003316\"> </a></td><td>Butterfly vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0002247<a name=\"hpo-HP.580002247\"> </a></td><td>Duodenal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008439<a name=\"hpo-HP.580008439\"> </a></td><td>Lumbar hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0011599<a name=\"hpo-HP.580011599\"> </a></td><td>Mesocardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008467<a name=\"hpo-HP.580008467\"> </a></td><td>Thoracic hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0004626<a name=\"hpo-HP.580004626\"> </a></td><td>Lumbar scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006808<a name=\"hpo-HP.580006808\"> </a></td><td>Cerebral hypomyelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0002926<a name=\"hpo-HP.580002926\"> </a></td><td>Abnormality of thyroid physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0007970<a name=\"hpo-HP.580007970\"> </a></td><td>Congenital ptosis</td></tr></table></div>"},"url":"http://purl.obolibrary.org/obo/hp.owl","version":"0.2.0","name":"HPO","title":"Human Phenotype Ontology","status":"draft","experimental":false,"date":"2022-12-09T17:30:30+00:00","publisher":"NCPI FHIR Working Group","contact":[{"name":"NCPI FHIR Working Group","telecom":[{"system":"url","value":"https://github.com/nih-ncpi"}]},{"name":"Meen Chul Kim","telecom":[{"system":"email","value":"meenchul@d3b.center","use":"work"}]}],"description":"The Human Phenotype Ontology (HPO) provides a standardized vocabulary of phenotypic abnormalities encountered in human disease. Please see license of HPO at http://www.human-phenotype-ontology.org","valueSet":"http://fhir.ncpi-project-forge.io/ValueSet/phenotype-codes","hierarchyMeaning":"is-a","compositional":false,"versionNeeded":false,"content":"fragment","count":1880,"filter":[{"code":"root","operator":["="],"value":"True or false."},{"code":"deprecated","operator":["="],"value":"True or false."},{"code":"imported","operator":["="],"value":"True or false"}],"property":[{"code":"parent","description":"Parent codes.","type":"code"},{"code":"imported","description":"Indicates if the concept is imported from another code system.","type":"boolean"},{"code":"root","description":"Indicates if this concept is a root concept (i.e. Thing is equivalent or a direct parent)","type":"boolean"},{"code":"deprecated","description":"Indicates if this concept is deprecated.","type":"boolean"}],"concept":[{"code":"HP:0000365","display":"Hearing impairment"},{"code":"HP:0002564","display":"obsolete Malformation of the heart and great vessels"},{"code":"HP:0001028","display":"Hemangioma"},{"code":"HP:0000476","display":"Cystic hygroma"},{"code":"HP:0000568","display":"Microphthalmia"},{"code":"HP:0000518","display":"Cataract"},{"code":"HP:0000612","display":"Iris coloboma"},{"code":"HP:0000567","display":"Chorioretinal coloboma"},{"code":"HP:0000316","display":"Hypertelorism"},{"code":"HP:0000482","display":"Microcornea"},{"code":"HP:0000588","display":"Optic nerve coloboma"},{"code":"HP:0004426","display":"Abnormality of the cheek"},{"code":"HP:0009125","display":"Lipodystrophy"},{"code":"HP:0002023","display":"Anal atresia"},{"code":"HP:0003468","display":"Abnormal vertebral morphology"},{"code":"HP:0000545","display":"Myopia"},{"code":"HP:0000122","display":"Unilateral renal agenesis"},{"code":"HP:0002143","display":"Abnormality of the spinal cord"},{"code":"HP:0003508","display":"Proportionate short stature"},{"code":"HP:0000271","display":"Abnormality of the face"},{"code":"HP:0000637","display":"Long palpebral fissure"},{"code":"HP:0000492","display":"Abnormal eyelid morphology"},{"code":"HP:0000389","display":"Chronic otitis media"},{"code":"HP:0000400","display":"Macrotia"},{"code":"HP:0000405","display":"Conductive hearing impairment"},{"code":"HP:0012712","display":"Mild hearing impairment"},{"code":"HP:0005280","display":"Depressed nasal bridge"},{"code":"HP:0000431","display":"Wide nasal bridge"},{"code":"HP:0000319","display":"Smooth philtrum"},{"code":"HP:0000175","display":"Cleft palate"},{"code":"HP:0001611","display":"Nasal speech"},{"code":"HP:0002099","display":"Asthma"},{"code":"HP:0001397","display":"Hepatic steatosis"},{"code":"HP:0001081","display":"Cholelithiasis"},{"code":"HP:0002650","display":"Scoliosis"},{"code":"HP:0001212","display":"Prominent fingertip pads"},{"code":"HP:0001328","display":"Specific learning disability"},{"code":"HP:0000824","display":"Growth hormone deficiency"},{"code":"HP:0002607","display":"Bowel incontinence"},{"code":"HP:0100731","display":"Transverse facial cleft"},{"code":"HP:0000528","display":"Anophthalmia"},{"code":"HP:0000601","display":"Hypotelorism"},{"code":"HP:0000369","display":"Low-set ears"},{"code":"HP:0001274","display":"Agenesis of corpus callosum"},{"code":"HP:0002084","display":"Encephalocele"},{"code":"HP:0007033","display":"Cerebellar dysplasia"},{"code":"HP:0100336","display":"Bilateral cleft lip"},{"code":"HP:0100337","display":"Bilateral cleft palate"},{"code":"HP:0001511","display":"Intrauterine growth retardation"},{"code":"HP:0011451","display":"Congenital microcephaly"},{"code":"HP:0000324","display":"Facial asymmetry"},{"code":"HP:0000581","display":"Blepharophimosis"},{"code":"HP:0000508","display":"Ptosis"},{"code":"HP:0008551","display":"Microtia"},{"code":"HP:0001631","display":"Atrial septal defect"},{"code":"HP:0000085","display":"Horseshoe kidney"},{"code":"HP:0011927","display":"Short digit"},{"code":"HP:0001156","display":"Brachydactyly"},{"code":"HP:0002066","display":"Gait ataxia"},{"code":"HP:0001250","display":"Seizure"},{"code":"HP:0001263","display":"Global developmental delay"},{"code":"HP:0001562","display":"Oligohydramnios"},{"code":"HP:0001195","display":"Single umbilical artery"},{"code":"HP:0006349","display":"Agenesis of permanent teeth"},{"code":"HP:0000668","display":"Hypodontia"},{"code":"HP:0000677","display":"Oligodontia"},{"code":"HP:0001252","display":"Muscular hypotonia"},{"code":"HP:0003429","display":"CNS hypomyelination"},{"code":"HP:0010864","display":"Intellectual disability, severe"},{"code":"HP:0004325","display":"Decreased body weight"},{"code":"HP:0000666","display":"Horizontal nystagmus"},{"code":"HP:0000218","display":"High palate"},{"code":"HP:0010809","display":"Broad uvula"},{"code":"HP:0000767","display":"Pectus excavatum"},{"code":"HP:0003691","display":"Scapular winging"},{"code":"HP:0002616","display":"Aortic root aneurysm"},{"code":"HP:0001601","display":"Laryngomalacia"},{"code":"HP:0002021","display":"Pyloric stenosis"},{"code":"HP:0001388","display":"Joint laxity"},{"code":"HP:0001187","display":"Hyperextensibility of the finger joints"},{"code":"HP:0000741","display":"Apathy"},{"code":"HP:0000817","display":"Poor eye contact"},{"code":"HP:0000821","display":"Hypothyroidism"},{"code":"HP:0000002","display":"Abnormality of body height"},{"code":"HP:0000079","display":"Abnormality of the urinary system"},{"code":"HP:0000164","display":"Abnormality of the dentition"},{"code":"HP:0000364","display":"Hearing abnormality"},{"code":"HP:0000366","display":"Abnormality of the nose"},{"code":"HP:0000464","display":"Abnormality of the neck"},{"code":"HP:0000707","display":"Abnormality of the nervous system"},{"code":"HP:0000708","display":"Behavioral abnormality"},{"code":"HP:0000769","display":"Abnormality of the breast"},{"code":"HP:0000772","display":"Abnormality of the ribs"},{"code":"HP:0000775","display":"Abnormality of the diaphragm"},{"code":"HP:0000889","display":"Abnormality of the clavicle"},{"code":"HP:0000925","display":"Abnormality of the vertebral column"},{"code":"HP:0001080","display":"Biliary tract abnormality"},{"code":"HP:0001392","display":"Abnormality of the liver"},{"code":"HP:0001438","display":"Abnormal abdomen morphology"},{"code":"HP:0001608","display":"Abnormality of the voice"},{"code":"HP:0001627","display":"Abnormal heart morphology"},{"code":"HP:0001732","display":"Abnormality of the pancreas"},{"code":"HP:0001739","display":"Abnormality of the nasopharynx"},{"code":"HP:0001743","display":"Abnormality of the spleen"},{"code":"HP:0001760","display":"Abnormal foot morphology"},{"code":"HP:0001871","display":"Abnormality of blood and blood-forming tissues"},{"code":"HP:0002031","display":"Abnormal esophagus morphology"},{"code":"HP:0002244","display":"Abnormality of the small 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narrow palate"},{"code":"HP:0011340","display":"Incomplete cleft of the upper lip"},{"code":"HP:0011613","display":"Interrupted aortic arch type B"},{"code":"HP:0006167","display":"Prominent proximal interphalangeal joints"},{"code":"HP:0002918","display":"Hypermagnesemia"},{"code":"HP:0011937","display":"Hypoplastic fifth toenail"},{"code":"HP:0001067","display":"Neurofibromas"},{"code":"HP:0011403","display":"Abnormal umbilical cord blood vessels"},{"code":"HP:0003316","display":"Butterfly vertebrae"},{"code":"HP:0002247","display":"Duodenal atresia"},{"code":"HP:0008439","display":"Lumbar hemivertebrae"},{"code":"HP:0011599","display":"Mesocardia"},{"code":"HP:0008467","display":"Thoracic hemivertebrae"},{"code":"HP:0004626","display":"Lumbar scoliosis"},{"code":"HP:0006808","display":"Cerebral hypomyelination"},{"code":"HP:0002926","display":"Abnormality of thyroid physiology"},{"code":"HP:0007970","display":"Congenital ptosis"}]}},{"name":"cache-id","valueString":"1bd0ee1e-301d-4730-9f0d-cc7cce05bada"},{"name":"valueSet","resource":{"resourceType":"ValueSet","status":"active","compose":{"inactive":true,"include":[{"system":"http://purl.obolibrary.org/obo/hp.owl","concept":[{"code":"HP:0010772","display":"Anomalous pulmonary venous return"}]}]}}},{"name":"_limit","valueString":"1000"},{"name":"_incomplete","valueString":"true"}]} </pre> <pre> 422 @@ -237,9 +234,9 @@ connection:keep-alive content-length:3772 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:04 GMT +date:Fri, 09 Dec 2022 17:30:41 GMT server:nginx -x-request-id:57-438588 +x-request-id:60-1125351 {"resourceType" : "OperationOutcome","text" : {"status" : "generated","div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>The code system definition for http://purl.obolibrary.org/obo/hp.owl is a fragment, so this expansion is not permitted unless the expansion parameter \"incomplete-ok\" has a value of \"true\"</p></div>"},"issue" : [{"severity" : "error","code" : "not-supported","details" : {"text" : "The code system definition for http://purl.obolibrary.org/obo/hp.owl is a fragment, so this expansion is not permitted unless the expansion parameter \"incomplete-ok\" has a value of \"true\""},"diagnostics" : "(0000000000EDB261){FHIRServer.exe} [00000000012DC261] Unknown function at TMethodImplementationIntercept + $E34F61\r\n(000000000033D7AC){FHIRServer.exe} [000000000073E7AC] Unknown function at TMethodImplementationIntercept + $2974AC\r\n(000000000033F46E){FHIRServer.exe} [000000000074046E] Unknown function at TMethodImplementationIntercept + $29916E\r\n(000000000004B6F7){FHIRServer.exe} [000000000044C6F7] Unknown function at __dbk_fcall_wrapper + $2E2F7\r\n(000000000004BFEB){FHIRServer.exe} [000000000044CFEB] Unknown function at __dbk_fcall_wrapper + $2EBEB\r\n(0000000000011276){FHIRServer.exe} [0000000000412276]\r\n(00000000000112B1){FHIRServer.exe} [00000000004122B1]\r\n(0000000000EDB261){FHIRServer.exe} [00000000012DC261] Unknown function at TMethodImplementationIntercept + $E34F61\r\n(0000000000ED861B){FHIRServer.exe} [00000000012D961B] Unknown function at TMethodImplementationIntercept + $E3231B\r\n(0000000000ED72AF){FHIRServer.exe} [00000000012D82AF] Unknown function at TMethodImplementationIntercept + $E30FAF\r\n(000000000109CE14){FHIRServer.exe} [000000000149DE14] Unknown function at TMethodImplementationIntercept + $FF6B14\r\n(000000000109C5C4){FHIRServer.exe} [000000000149D5C4] Unknown function at TMethodImplementationIntercept + $FF62C4\r\n(00000000013DCA77){FHIRServer.exe} [00000000017DDA77] Unknown function at TMethodImplementationIntercept + $1336777\r\n(00000000011587F2){FHIRServer.exe} [00000000015597F2] Unknown function at TMethodImplementationIntercept + $10B24F2\r\n(0000000001150BC7){FHIRServer.exe} [0000000001551BC7] Unknown function at TMethodImplementationIntercept + $10AA8C7\r\n(00000000023509CA){FHIRServer.exe} [00000000027519CA] Unknown function at TMethodImplementationIntercept + $22AA6CA\r\n(000000000234D561){FHIRServer.exe} [000000000274E561] Unknown function at TMethodImplementationIntercept + $22A7261\r\n(0000000002348313){FHIRServer.exe} [0000000002749313] Unknown function at TMethodImplementationIntercept + $22A2013\r\n(0000000006CAD3CF){FHIRServer.exe} [00000000070AE3CF] Unknown function at TMethodImplementationIntercept + $6C070CF\r\n(000000000025CA0C){FHIRServer.exe} [000000000065DA0C] Unknown function at TMethodImplementationIntercept + $1B670C\r\n(000000000025E666){FHIRServer.exe} [000000000065F666] Unknown function at TMethodImplementationIntercept + $1B8366\r\n(000000000023789E){FHIRServer.exe} [000000000063889E] Unknown function at TMethodImplementationIntercept + $19159E\r\n(0000000000235961){FHIRServer.exe} [0000000000636961] Unknown function at TMethodImplementationIntercept + $18F661\r\n(000000000023CE94){FHIRServer.exe} [000000000063DE94] Unknown function at TMethodImplementationIntercept + $196B94\r\n(000000000023BDBD){FHIRServer.exe} [000000000063CDBD] Unknown function at TMethodImplementationIntercept + $195ABD\r\n(0000000000138173){FHIRServer.exe} [0000000000539173] Unknown function at TMethodImplementationIntercept + $91E73\r\n(0000000000011E3D){FHIRServer.exe} [0000000000412E3D]\r\n(00000000000003D2){KERNEL32.DLL} [00007FFDEFEA13D2] BaseThreadInitThunk + $22\r\n(0000000000014504){ntdll.dll } [00007FFDF0F85504] RtlUserThreadStart + $34\r\n"}]} </pre> @@ -252,7 +249,7 @@ Accept: application/fhir+json Content-Type: application/fhir+json;charset=UTF-8 -{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"},{"name":"includeDefinition","valueBoolean":false},{"name":"excludeNested","valueBoolean":true},{"name":"tx-resource","resource":{"resourceType":"CodeSystem","id":"mondo","text":{"status":"generated","div":"<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://purl.obolibrary.org/obo/mondo.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">MONDO:0005072<a name=\"mondo-MONDO.580005072\"> </a></td><td>neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">MONDO:0002749<a name=\"mondo-MONDO.580002749\"> </a></td><td>extracranial neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">MONDO:0008542<a name=\"mondo-MONDO.580008542\"> </a></td><td>tetralogy of fallot</td></tr></table></div>"},"url":"http://purl.obolibrary.org/obo/mondo.owl","version":"0.2.0","name":"Mondo","title":"Mondo Disease Ontology","status":"draft","experimental":false,"date":"2022-11-28T21:07:57+00:00","publisher":"NCPI FHIR Working Group","contact":[{"name":"NCPI FHIR Working Group","telecom":[{"system":"url","value":"https://github.com/nih-ncpi"}]},{"name":"Meen Chul Kim","telecom":[{"system":"email","value":"meenchul@d3b.center","use":"work"}]}],"description":"The Mondo Disease Ontology (Mondo) aims to harmonize disease definitions across the world. The name Mondo comes from the latin word 'mundus' and means 'for the world.'","caseSensitive":true,"content":"fragment","count":3,"concept":[{"code":"MONDO:0005072","display":"neuroblastoma"},{"code":"MONDO:0002749","display":"extracranial neuroblastoma"},{"code":"MONDO:0008542","display":"tetralogy of fallot"}]}},{"name":"cache-id","valueString":"f7a2d3d6-b705-419a-b131-7120bb379529"},{"name":"valueSet","resource":{"resourceType":"ValueSet","status":"active","compose":{"inactive":true,"include":[{"system":"http://purl.obolibrary.org/obo/mondo.owl","concept":[{"code":"0017705","display":"congenital pulmonary venous return anomaly"},{"code":"0007130","display":"congenital total pulmonary venous return anomaly"}]}]}}},{"name":"_limit","valueString":"1000"},{"name":"_incomplete","valueString":"true"}]} +{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"},{"name":"includeDefinition","valueBoolean":false},{"name":"excludeNested","valueBoolean":true},{"name":"tx-resource","resource":{"resourceType":"CodeSystem","id":"mondo","text":{"status":"generated","div":"<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://purl.obolibrary.org/obo/mondo.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">MONDO:0005072<a name=\"mondo-MONDO.580005072\"> </a></td><td>neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">MONDO:0002749<a name=\"mondo-MONDO.580002749\"> </a></td><td>extracranial neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">MONDO:0008542<a name=\"mondo-MONDO.580008542\"> </a></td><td>tetralogy of fallot</td></tr></table></div>"},"url":"http://purl.obolibrary.org/obo/mondo.owl","version":"0.2.0","name":"Mondo","title":"Mondo Disease Ontology","status":"draft","experimental":false,"date":"2022-12-09T17:30:30+00:00","publisher":"NCPI FHIR Working Group","contact":[{"name":"NCPI FHIR Working Group","telecom":[{"system":"url","value":"https://github.com/nih-ncpi"}]},{"name":"Meen Chul Kim","telecom":[{"system":"email","value":"meenchul@d3b.center","use":"work"}]}],"description":"The Mondo Disease Ontology (Mondo) aims to harmonize disease definitions across the world. The name Mondo comes from the latin word 'mundus' and means 'for the world.'","caseSensitive":true,"content":"fragment","count":3,"concept":[{"code":"MONDO:0005072","display":"neuroblastoma"},{"code":"MONDO:0002749","display":"extracranial neuroblastoma"},{"code":"MONDO:0008542","display":"tetralogy of fallot"}]}},{"name":"cache-id","valueString":"1bd0ee1e-301d-4730-9f0d-cc7cce05bada"},{"name":"valueSet","resource":{"resourceType":"ValueSet","status":"active","compose":{"inactive":true,"include":[{"system":"http://purl.obolibrary.org/obo/mondo.owl","concept":[{"code":"0017705","display":"congenital pulmonary venous return anomaly"},{"code":"0007130","display":"congenital total pulmonary venous return anomaly"}]}]}}},{"name":"_limit","valueString":"1000"},{"name":"_incomplete","valueString":"true"}]} </pre> <pre> 422 @@ -262,9 +259,9 @@ connection:keep-alive content-length:3778 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:04 GMT +date:Fri, 09 Dec 2022 17:30:43 GMT server:nginx -x-request-id:57-438592 +x-request-id:60-1125382 {"resourceType" : "OperationOutcome","text" : {"status" : "generated","div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>The code system definition for http://purl.obolibrary.org/obo/mondo.owl is a fragment, so this expansion is not permitted unless the expansion parameter \"incomplete-ok\" has a value of \"true\"</p></div>"},"issue" : [{"severity" : "error","code" : "not-supported","details" : {"text" : "The code system definition for http://purl.obolibrary.org/obo/mondo.owl is a fragment, so this expansion is not permitted unless the expansion parameter \"incomplete-ok\" has a value of \"true\""},"diagnostics" : "(0000000000EDB261){FHIRServer.exe} [00000000012DC261] Unknown function at TMethodImplementationIntercept + $E34F61\r\n(000000000033D7AC){FHIRServer.exe} [000000000073E7AC] Unknown function at TMethodImplementationIntercept + $2974AC\r\n(000000000033F46E){FHIRServer.exe} [000000000074046E] Unknown function at TMethodImplementationIntercept + $29916E\r\n(000000000004B6F7){FHIRServer.exe} [000000000044C6F7] Unknown function at __dbk_fcall_wrapper + $2E2F7\r\n(000000000004BFEB){FHIRServer.exe} [000000000044CFEB] Unknown function at __dbk_fcall_wrapper + $2EBEB\r\n(0000000000011276){FHIRServer.exe} [0000000000412276]\r\n(00000000000112B1){FHIRServer.exe} [00000000004122B1]\r\n(0000000000EDB261){FHIRServer.exe} [00000000012DC261] Unknown function at TMethodImplementationIntercept + $E34F61\r\n(0000000000ED861B){FHIRServer.exe} [00000000012D961B] Unknown function at TMethodImplementationIntercept + $E3231B\r\n(0000000000ED72AF){FHIRServer.exe} [00000000012D82AF] Unknown function at TMethodImplementationIntercept + $E30FAF\r\n(000000000109CE14){FHIRServer.exe} [000000000149DE14] Unknown function at TMethodImplementationIntercept + $FF6B14\r\n(000000000109C5C4){FHIRServer.exe} [000000000149D5C4] Unknown function at TMethodImplementationIntercept + $FF62C4\r\n(00000000013DCA77){FHIRServer.exe} [00000000017DDA77] Unknown function at TMethodImplementationIntercept + $1336777\r\n(00000000011587F2){FHIRServer.exe} [00000000015597F2] Unknown function at TMethodImplementationIntercept + $10B24F2\r\n(0000000001150BC7){FHIRServer.exe} [0000000001551BC7] Unknown function at TMethodImplementationIntercept + $10AA8C7\r\n(00000000023509CA){FHIRServer.exe} [00000000027519CA] Unknown function at TMethodImplementationIntercept + $22AA6CA\r\n(000000000234D561){FHIRServer.exe} [000000000274E561] Unknown function at TMethodImplementationIntercept + $22A7261\r\n(0000000002348313){FHIRServer.exe} [0000000002749313] Unknown function at TMethodImplementationIntercept + $22A2013\r\n(0000000006CAD3CF){FHIRServer.exe} [00000000070AE3CF] Unknown function at TMethodImplementationIntercept + $6C070CF\r\n(000000000025CA0C){FHIRServer.exe} [000000000065DA0C] Unknown function at TMethodImplementationIntercept + $1B670C\r\n(000000000025E666){FHIRServer.exe} [000000000065F666] Unknown function at TMethodImplementationIntercept + $1B8366\r\n(000000000023789E){FHIRServer.exe} [000000000063889E] Unknown function at TMethodImplementationIntercept + $19159E\r\n(0000000000235961){FHIRServer.exe} [0000000000636961] Unknown function at TMethodImplementationIntercept + $18F661\r\n(000000000023CE94){FHIRServer.exe} [000000000063DE94] Unknown function at TMethodImplementationIntercept + $196B94\r\n(000000000023BDBD){FHIRServer.exe} [000000000063CDBD] Unknown function at TMethodImplementationIntercept + $195ABD\r\n(0000000000138173){FHIRServer.exe} [0000000000539173] Unknown function at TMethodImplementationIntercept + $91E73\r\n(0000000000011E3D){FHIRServer.exe} [0000000000412E3D]\r\n(00000000000003D2){KERNEL32.DLL} [00007FFDEFEA13D2] BaseThreadInitThunk + $22\r\n(0000000000014504){ntdll.dll } [00007FFDF0F85504] RtlUserThreadStart + $34\r\n"}]} </pre> @@ -287,9 +284,9 @@ connection:keep-alive content-length:3656 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:05 GMT +date:Fri, 09 Dec 2022 17:30:44 GMT server:nginx -x-request-id:57-438594 +x-request-id:60-1125393 {"resourceType" : "OperationOutcome","text" : {"status" : "generated","div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls</p></div>"},"issue" : [{"severity" : "error","code" : "not-supported","details" : {"text" : "Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls"},"diagnostics" : "(0000000000ECECED){FHIRServer.exe} [00000000012CFCED] Unknown function at TMethodImplementationIntercept + $E289ED\r\n(000000000033D7AC){FHIRServer.exe} [000000000073E7AC] Unknown function at TMethodImplementationIntercept + $2974AC\r\n(000000000033F46E){FHIRServer.exe} [000000000074046E] Unknown function at TMethodImplementationIntercept + $29916E\r\n(000000000004B6F7){FHIRServer.exe} [000000000044C6F7] Unknown function at __dbk_fcall_wrapper + $2E2F7\r\n(000000000004BFEB){FHIRServer.exe} [000000000044CFEB] Unknown function at __dbk_fcall_wrapper + $2EBEB\r\n(0000000000011276){FHIRServer.exe} [0000000000412276]\r\n(00000000000112B1){FHIRServer.exe} [00000000004122B1]\r\n(0000000000ECECED){FHIRServer.exe} [00000000012CFCED] Unknown function at TMethodImplementationIntercept + $E289ED\r\n(0000000000EDAEDE){FHIRServer.exe} [00000000012DBEDE] Unknown function at TMethodImplementationIntercept + $E34BDE\r\n(0000000000ED861B){FHIRServer.exe} [00000000012D961B] Unknown function at TMethodImplementationIntercept + $E3231B\r\n(0000000000ED72AF){FHIRServer.exe} [00000000012D82AF] Unknown function at TMethodImplementationIntercept + $E30FAF\r\n(000000000109CE14){FHIRServer.exe} [000000000149DE14] Unknown function at TMethodImplementationIntercept + $FF6B14\r\n(000000000109C5C4){FHIRServer.exe} [000000000149D5C4] Unknown function at TMethodImplementationIntercept + $FF62C4\r\n(00000000013DCA77){FHIRServer.exe} [00000000017DDA77] Unknown function at TMethodImplementationIntercept + $1336777\r\n(00000000011587F2){FHIRServer.exe} [00000000015597F2] Unknown function at TMethodImplementationIntercept + $10B24F2\r\n(0000000001150BC7){FHIRServer.exe} [0000000001551BC7] Unknown function at TMethodImplementationIntercept + $10AA8C7\r\n(00000000023509CA){FHIRServer.exe} [00000000027519CA] Unknown function at TMethodImplementationIntercept + $22AA6CA\r\n(000000000234D561){FHIRServer.exe} [000000000274E561] Unknown function at TMethodImplementationIntercept + $22A7261\r\n(0000000002348313){FHIRServer.exe} [0000000002749313] Unknown function at TMethodImplementationIntercept + $22A2013\r\n(0000000006CAD3CF){FHIRServer.exe} [00000000070AE3CF] Unknown function at TMethodImplementationIntercept + $6C070CF\r\n(000000000025CA0C){FHIRServer.exe} [000000000065DA0C] Unknown function at TMethodImplementationIntercept + $1B670C\r\n(000000000025E666){FHIRServer.exe} [000000000065F666] Unknown function at TMethodImplementationIntercept + $1B8366\r\n(000000000023789E){FHIRServer.exe} [000000000063889E] Unknown function at TMethodImplementationIntercept + $19159E\r\n(0000000000235961){FHIRServer.exe} [0000000000636961] Unknown function at TMethodImplementationIntercept + $18F661\r\n(000000000023CE94){FHIRServer.exe} [000000000063DE94] Unknown function at TMethodImplementationIntercept + $196B94\r\n(000000000023BDBD){FHIRServer.exe} [000000000063CDBD] Unknown function at TMethodImplementationIntercept + $195ABD\r\n(0000000000138173){FHIRServer.exe} [0000000000539173] Unknown function at TMethodImplementationIntercept + $91E73\r\n(0000000000011E3D){FHIRServer.exe} [0000000000412E3D]\r\n(00000000000003D2){KERNEL32.DLL} [00007FFDEFEA13D2] BaseThreadInitThunk + $22\r\n(0000000000014504){ntdll.dll } [00007FFDF0F85504] RtlUserThreadStart + $34\r\n"}]} </pre> @@ -302,7 +299,7 @@ Accept: application/fhir+json Content-Type: application/fhir+json;charset=UTF-8 -{"resourceType":"Parameters","parameter":[{"name":"coding","valueCoding":{"system":"http://unstats.un.org/unsd/methods/m49/m49.htm","code":"001"}},{"name":"default-to-latest-version","valueBoolean":true},{"name":"valueSet","resource":{"resourceType":"ValueSet","url":"http://hl7.org/fhir/ValueSet/jurisdiction--2","version":"4.0.1","status":"active","compose":{"include":[{"system":"http://unstats.un.org/unsd/methods/m49/m49.htm","filter":[{"property":"class","op":"=","value":"region"}]}]}}},{"name":"cache-id","valueString":"f7a2d3d6-b705-419a-b131-7120bb379529"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} +{"resourceType":"Parameters","parameter":[{"name":"coding","valueCoding":{"system":"http://unstats.un.org/unsd/methods/m49/m49.htm","code":"001"}},{"name":"default-to-latest-version","valueBoolean":true},{"name":"valueSet","resource":{"resourceType":"ValueSet","url":"http://hl7.org/fhir/ValueSet/jurisdiction--2","version":"4.0.1","status":"active","compose":{"include":[{"system":"http://unstats.un.org/unsd/methods/m49/m49.htm","filter":[{"property":"class","op":"=","value":"region"}]}]}}},{"name":"cache-id","valueString":"1bd0ee1e-301d-4730-9f0d-cc7cce05bada"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} </pre> <pre> 200 @@ -313,12 +310,12 @@ connection:keep-alive content-length:259 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:05 GMT -last-modified:Mon, 28 Nov 2022 21:08:05 GMT +date:Fri, 09 Dec 2022 17:30:44 GMT +last-modified:Fri, 09 Dec 2022 17:30:44 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438597 +x-request-id:60-1125401 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "World"},{"name" : "system","valueString" : "http://unstats.un.org/unsd/methods/m49/m49.htm"},{"name" : "code","valueString" : "001"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -331,7 +328,7 @@ Accept: application/fhir+json Content-Type: application/fhir+json;charset=UTF-8 -{"resourceType":"Parameters","parameter":[{"name":"coding","valueCoding":{"system":"http://unstats.un.org/unsd/methods/m49/m49.htm","code":"001"}},{"name":"valueSetMode","valueString":"NO_MEMBERSHIP_CHECK"},{"name":"default-to-latest-version","valueBoolean":true},{"name":"valueSet","resource":{"resourceType":"ValueSet","id":"jurisdiction","meta":{"lastUpdated":"2019-11-01T09:29:23.356+11:00","profile":["http://hl7.org/fhir/StructureDefinition/shareablevalueset"]},"extension":[{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-wg","valueCode":"vocab"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status","valueCode":"normative"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm","valueInteger":5},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version","valueCode":"4.0.0"}],"url":"http://hl7.org/fhir/ValueSet/jurisdiction","identifier":[{"system":"urn:ietf:rfc:3986","value":"urn:oid:2.16.840.1.113883.4.642.3.48"}],"version":"4.0.1","name":"Jurisdiction ValueSet","title":"Jurisdiction","status":"active","experimental":false,"date":"2019-11-01T09:29:23+11:00","publisher":"FHIR Project team","contact":[{"telecom":[{"system":"url","value":"http://hl7.org/fhir"}]}],"description":"This value set defines a base set of codes for country, country subdivision and region for indicating where a resource is intended to be used. \r\n \r\n Note: The codes for countries and country subdivisions are taken from [ISO 3166](https://www.iso.org/iso-3166-country-codes.html) while the codes for \"supra-national\" regions are from [UN Standard country or area codes for statistical use (M49)](http://unstats.un.org/unsd/methods/m49/m49.htm).","compose":{"include":[{"system":"urn:iso:std:iso:3166"},{"system":"urn:iso:std:iso:3166:-2"},{"system":"http://unstats.un.org/unsd/methods/m49/m49.htm","filter":[{"property":"class","op":"=","value":"region"}]}]}}},{"name":"cache-id","valueString":"f7a2d3d6-b705-419a-b131-7120bb379529"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} +{"resourceType":"Parameters","parameter":[{"name":"coding","valueCoding":{"system":"http://unstats.un.org/unsd/methods/m49/m49.htm","code":"001"}},{"name":"valueSetMode","valueString":"NO_MEMBERSHIP_CHECK"},{"name":"default-to-latest-version","valueBoolean":true},{"name":"valueSet","resource":{"resourceType":"ValueSet","id":"jurisdiction","meta":{"lastUpdated":"2019-11-01T09:29:23.356+11:00","profile":["http://hl7.org/fhir/StructureDefinition/shareablevalueset"]},"extension":[{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-wg","valueCode":"vocab"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status","valueCode":"normative"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm","valueInteger":5},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version","valueCode":"4.0.0"}],"url":"http://hl7.org/fhir/ValueSet/jurisdiction","identifier":[{"system":"urn:ietf:rfc:3986","value":"urn:oid:2.16.840.1.113883.4.642.3.48"}],"version":"4.0.1","name":"Jurisdiction ValueSet","title":"Jurisdiction","status":"active","experimental":false,"date":"2019-11-01T09:29:23+11:00","publisher":"FHIR Project team","contact":[{"telecom":[{"system":"url","value":"http://hl7.org/fhir"}]}],"description":"This value set defines a base set of codes for country, country subdivision and region for indicating where a resource is intended to be used. \r\n \r\n Note: The codes for countries and country subdivisions are taken from [ISO 3166](https://www.iso.org/iso-3166-country-codes.html) while the codes for \"supra-national\" regions are from [UN Standard country or area codes for statistical use (M49)](http://unstats.un.org/unsd/methods/m49/m49.htm).","compose":{"include":[{"system":"urn:iso:std:iso:3166"},{"system":"urn:iso:std:iso:3166:-2"},{"system":"http://unstats.un.org/unsd/methods/m49/m49.htm","filter":[{"property":"class","op":"=","value":"region"}]}]}}},{"name":"cache-id","valueString":"1bd0ee1e-301d-4730-9f0d-cc7cce05bada"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} </pre> <pre> 200 @@ -342,12 +339,12 @@ connection:keep-alive content-length:259 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:05 GMT -last-modified:Mon, 28 Nov 2022 21:08:05 GMT +date:Fri, 09 Dec 2022 17:30:45 GMT +last-modified:Fri, 09 Dec 2022 17:30:45 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438598 +x-request-id:60-1125404 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "World"},{"name" : "system","valueString" : "http://unstats.un.org/unsd/methods/m49/m49.htm"},{"name" : "code","valueString" : "001"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -371,12 +368,12 @@ connection:keep-alive content-length:259 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:05 GMT -last-modified:Mon, 28 Nov 2022 21:08:05 GMT +date:Fri, 09 Dec 2022 17:30:45 GMT +last-modified:Fri, 09 Dec 2022 17:30:45 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438599 +x-request-id:60-1125408 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "World"},{"name" : "system","valueString" : "http://unstats.un.org/unsd/methods/m49/m49.htm"},{"name" : "code","valueString" : "001"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -400,12 +397,12 @@ connection:keep-alive content-length:409 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:07 GMT -last-modified:Mon, 28 Nov 2022 21:08:07 GMT +date:Fri, 09 Dec 2022 17:30:47 GMT +last-modified:Fri, 09 Dec 2022 17:30:47 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438602 +x-request-id:60-1125418 {"resourceType" : "Parameters","parameter" : [{"name" : "result","valueBoolean" : false},{"name" : "message","valueString" : "The code system 'https://uts.nlm.nih.gov/uts/umls' is not known (encountered paired with code = 'C2348584'); The code provided (https://uts.nlm.nih.gov/uts/umls#C2348584) is not valid in the value set 'All codes known to the system'"},{"name" : "cause","valueString" : "not-found"}]} </pre> @@ -429,12 +426,12 @@ connection:keep-alive content-length:295 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:08 GMT -last-modified:Mon, 28 Nov 2022 21:08:08 GMT +date:Fri, 09 Dec 2022 17:30:47 GMT +last-modified:Fri, 09 Dec 2022 17:30:47 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438604 +x-request-id:60-1125419 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Body mass index (BMI)"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "LP35925-4"},{"name" : "version","valueString" : "2.73"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -458,12 +455,12 @@ connection:keep-alive content-length:486 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:11 GMT -last-modified:Mon, 28 Nov 2022 21:08:10 GMT +date:Fri, 09 Dec 2022 17:30:50 GMT +last-modified:Fri, 09 Dec 2022 17:30:49 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438612 +x-request-id:60-1125424 {"resourceType" : "Parameters","parameter" : [{"name" : "result","valueBoolean" : false},{"name" : "message","valueString" : "Unable to find code 44807982 in http://snomed.info/sct (version http://snomed.info/sct/900000000000207008/version/20220731); The code \"44807982\" is not valid in the system http://snomed.info/sct; The code provided (http://snomed.info/sct#44807982) is not valid in the value set 'All codes known to the system'"},{"name" : "cause","valueString" : "invalid"}]} </pre> @@ -476,7 +473,7 @@ Accept: application/fhir+json Content-Type: application/fhir+json;charset=UTF-8 -{"resourceType":"Parameters","parameter":[{"name":"coding","valueCoding":{"system":"http://unitsofmeasure.org","code":"kg/m2"}},{"name":"default-to-latest-version","valueBoolean":true},{"name":"valueSet","resource":{"resourceType":"ValueSet","url":"http://hl7.org/fhir/ValueSet/ucum-units--0","version":"4.0.1","status":"active","compose":{"include":[{"system":"http://unitsofmeasure.org"}]}}},{"name":"cache-id","valueString":"f7a2d3d6-b705-419a-b131-7120bb379529"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} +{"resourceType":"Parameters","parameter":[{"name":"coding","valueCoding":{"system":"http://unitsofmeasure.org","code":"kg/m2"}},{"name":"default-to-latest-version","valueBoolean":true},{"name":"valueSet","resource":{"resourceType":"ValueSet","url":"http://hl7.org/fhir/ValueSet/ucum-units--0","version":"4.0.1","status":"active","compose":{"include":[{"system":"http://unitsofmeasure.org"}]}}},{"name":"cache-id","valueString":"1bd0ee1e-301d-4730-9f0d-cc7cce05bada"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} </pre> <pre> 200 @@ -487,12 +484,12 @@ connection:keep-alive content-length:240 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:12 GMT -last-modified:Mon, 28 Nov 2022 21:08:12 GMT +date:Fri, 09 Dec 2022 17:30:51 GMT +last-modified:Fri, 09 Dec 2022 17:30:51 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438617 +x-request-id:60-1125429 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "kg/m2"},{"name" : "system","valueString" : "http://unitsofmeasure.org"},{"name" : "code","valueString" : "kg/m2"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -505,7 +502,7 @@ Accept: application/fhir+json Content-Type: application/fhir+json;charset=UTF-8 -{"resourceType":"Parameters","parameter":[{"name":"coding","valueCoding":{"system":"http://unitsofmeasure.org","code":"kg/m2"}},{"name":"valueSetMode","valueString":"NO_MEMBERSHIP_CHECK"},{"name":"default-to-latest-version","valueBoolean":true},{"name":"valueSet","resource":{"resourceType":"ValueSet","id":"ucum-units","meta":{"lastUpdated":"2019-11-01T09:29:23.356+11:00","profile":["http://hl7.org/fhir/StructureDefinition/shareablevalueset"]},"extension":[{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-wg","valueCode":"fhir"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status","valueCode":"trial-use"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm","valueInteger":0}],"url":"http://hl7.org/fhir/ValueSet/ucum-units","identifier":[{"system":"urn:ietf:rfc:3986","value":"urn:oid:2.16.840.1.113883.4.642.3.912"}],"version":"4.0.1","name":"UCUMCodes","title":"UCUM Codes","status":"draft","experimental":false,"date":"2019-11-01T09:29:23+11:00","publisher":"FHIR Project team","contact":[{"telecom":[{"system":"url","value":"http://hl7.org/fhir"}]}],"description":"Unified Code for Units of Measure (UCUM). This value set includes all UCUM codes","copyright":"The UCUM codes, UCUM table (regardless of format), and UCUM Specification are copyright © 1999-2009, Regenstrief Institute, Inc. and the Unified Codes for Units of Measures (UCUM) Organization. All rights reserved.","compose":{"include":[{"system":"http://unitsofmeasure.org"}]}}},{"name":"cache-id","valueString":"f7a2d3d6-b705-419a-b131-7120bb379529"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} +{"resourceType":"Parameters","parameter":[{"name":"coding","valueCoding":{"system":"http://unitsofmeasure.org","code":"kg/m2"}},{"name":"valueSetMode","valueString":"NO_MEMBERSHIP_CHECK"},{"name":"default-to-latest-version","valueBoolean":true},{"name":"valueSet","resource":{"resourceType":"ValueSet","id":"ucum-units","meta":{"lastUpdated":"2019-11-01T09:29:23.356+11:00","profile":["http://hl7.org/fhir/StructureDefinition/shareablevalueset"]},"extension":[{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-wg","valueCode":"fhir"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status","valueCode":"trial-use"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm","valueInteger":0}],"url":"http://hl7.org/fhir/ValueSet/ucum-units","identifier":[{"system":"urn:ietf:rfc:3986","value":"urn:oid:2.16.840.1.113883.4.642.3.912"}],"version":"4.0.1","name":"UCUMCodes","title":"UCUM Codes","status":"draft","experimental":false,"date":"2019-11-01T09:29:23+11:00","publisher":"FHIR Project team","contact":[{"telecom":[{"system":"url","value":"http://hl7.org/fhir"}]}],"description":"Unified Code for Units of Measure (UCUM). This value set includes all UCUM codes","copyright":"The UCUM codes, UCUM table (regardless of format), and UCUM Specification are copyright © 1999-2009, Regenstrief Institute, Inc. and the Unified Codes for Units of Measures (UCUM) Organization. All rights reserved.","compose":{"include":[{"system":"http://unitsofmeasure.org"}]}}},{"name":"cache-id","valueString":"1bd0ee1e-301d-4730-9f0d-cc7cce05bada"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} </pre> <pre> 200 @@ -516,12 +513,12 @@ connection:keep-alive content-length:285 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:12 GMT -last-modified:Mon, 28 Nov 2022 21:08:12 GMT +date:Fri, 09 Dec 2022 17:30:51 GMT +last-modified:Fri, 09 Dec 2022 17:30:51 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438618 +x-request-id:60-1125430 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "kg/m2"},{"name" : "system","valueString" : "http://unitsofmeasure.org"},{"name" : "code","valueString" : "kg/m2"},{"name" : "version","valueString" : "2.0.1"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -545,12 +542,12 @@ connection:keep-alive content-length:285 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:13 GMT -last-modified:Mon, 28 Nov 2022 21:08:12 GMT +date:Fri, 09 Dec 2022 17:30:51 GMT +last-modified:Fri, 09 Dec 2022 17:30:51 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438620 +x-request-id:60-1125431 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "kg/m2"},{"name" : "system","valueString" : "http://unitsofmeasure.org"},{"name" : "code","valueString" : "kg/m2"},{"name" : "version","valueString" : "2.0.1"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -574,12 +571,12 @@ connection:keep-alive content-length:279 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:13 GMT -last-modified:Mon, 28 Nov 2022 21:08:13 GMT +date:Fri, 09 Dec 2022 17:30:51 GMT +last-modified:Fri, 09 Dec 2022 17:30:51 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438622 +x-request-id:60-1125433 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "uL"},{"name" : "system","valueString" : "http://unitsofmeasure.org"},{"name" : "code","valueString" : "uL"},{"name" : "version","valueString" : "2.0.1"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -603,12 +600,12 @@ connection:keep-alive content-length:349 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:13 GMT -last-modified:Mon, 28 Nov 2022 21:08:13 GMT +date:Fri, 09 Dec 2022 17:30:51 GMT +last-modified:Fri, 09 Dec 2022 17:30:51 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438624 +x-request-id:60-1125434 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Biopsy - action"},{"name" : "system","valueString" : "http://snomed.info/sct"},{"name" : "code","valueString" : "129314006"},{"name" : "version","valueString" : "http://snomed.info/sct/900000000000207008/version/20220731"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -632,12 +629,12 @@ connection:keep-alive content-length:355 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:13 GMT -last-modified:Mon, 28 Nov 2022 21:08:13 GMT +date:Fri, 09 Dec 2022 17:30:52 GMT +last-modified:Fri, 09 Dec 2022 17:30:52 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438625 +x-request-id:60-1125436 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Central nervous system"},{"name" : "system","valueString" : "http://snomed.info/sct"},{"name" : "code","valueString" : "21483005"},{"name" : "version","valueString" : "http://snomed.info/sct/900000000000207008/version/20220731"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -650,7 +647,7 @@ Accept: application/fhir+json Content-Type: application/fhir+json;charset=UTF-8 -{"resourceType":"Parameters","parameter":[{"name":"codeableConcept","valueCodeableConcept":{"coding":[{"code":"diagnostic"}]}},{"name":"valueSetMode","valueString":"CHECK_MEMERSHIP_ONLY"},{"name":"default-to-latest-version","valueBoolean":true},{"name":"valueSet","resource":{"resourceType":"ValueSet","id":"research-study-prim-purp-type","meta":{"lastUpdated":"2019-11-01T09:29:23.356+11:00","profile":["http://hl7.org/fhir/StructureDefinition/shareablevalueset"]},"extension":[{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-wg","valueCode":"brr"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status","valueCode":"trial-use"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm","valueInteger":1}],"url":"http://hl7.org/fhir/ValueSet/research-study-prim-purp-type","identifier":[{"system":"urn:ietf:rfc:3986","value":"urn:oid:2.16.840.1.113883.4.642.3.827"}],"version":"4.0.1","name":"ResearchStudyPrimaryPurposeType","title":"ResearchStudyPrimaryPurposeType","status":"draft","experimental":false,"date":"2019-11-01T09:29:23+11:00","publisher":"HL7 (FHIR Project)","contact":[{"telecom":[{"system":"url","value":"http://hl7.org/fhir"},{"system":"email","value":"fhir@lists.hl7.org"}]}],"description":"Codes for the main intent of the study.","immutable":true,"compose":{"include":[{"system":"http://terminology.hl7.org/CodeSystem/research-study-prim-purp-type"}]}}},{"name":"tx-resource","resource":{"resourceType":"CodeSystem","id":"research-study-prim-purp-type","meta":{"lastUpdated":"2020-04-09T21:10:28.568+00:00"},"text":{"status":"generated","div":"<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://terminology.hl7.org/CodeSystem/research-study-prim-purp-type</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style=\"white-space:nowrap\">treatment<a name=\"research-study-prim-purp-type-treatment\"> </a></td><td>Treatment</td><td>One or more interventions are being evaluated for treating a disease, syndrome, or condition.</td></tr><tr><td style=\"white-space:nowrap\">prevention<a name=\"research-study-prim-purp-type-prevention\"> </a></td><td>Prevention</td><td>One or more interventions are being assessed for preventing the development of a specific disease or health condition.</td></tr><tr><td style=\"white-space:nowrap\">diagnostic<a name=\"research-study-prim-purp-type-diagnostic\"> </a></td><td>Diagnostic</td><td>One or more interventions are being evaluated for identifying a disease or health condition.</td></tr><tr><td style=\"white-space:nowrap\">supportive-care<a name=\"research-study-prim-purp-type-supportive-care\"> </a></td><td>Supportive Care</td><td>One or more interventions are evaluated for maximizing comfort, minimizing side effects, or mitigating against a decline in the participant's health or function.</td></tr><tr><td style=\"white-space:nowrap\">screening<a name=\"research-study-prim-purp-type-screening\"> </a></td><td>Screening</td><td>One or more interventions are assessed or examined for identifying a condition, or risk factors for a condition, in people who are not yet known to have the condition or risk factor.</td></tr><tr><td style=\"white-space:nowrap\">health-services-research<a name=\"research-study-prim-purp-type-health-services-research\"> </a></td><td>Health Services Research</td><td>One or more interventions for evaluating the delivery, processes, management, organization, or financing of healthcare.</td></tr><tr><td style=\"white-space:nowrap\">basic-science<a name=\"research-study-prim-purp-type-basic-science\"> </a></td><td>Basic Science</td><td>One or more interventions for examining the basic mechanism of action (for example, physiology or biomechanics of an intervention).</td></tr><tr><td style=\"white-space:nowrap\">device-feasibility<a name=\"research-study-prim-purp-type-device-feasibility\"> </a></td><td>Device Feasibility</td><td>An intervention of a device product is being evaluated to determine the feasibility of the product or to test a prototype device and not health outcomes. Such studies are conducted to confirm the design and operating specifications of a device before beginning a full clinical trial.</td></tr></table></div>"},"extension":[{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-wg","valueCode":"brr"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status","valueCode":"trial-use"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm","valueInteger":0}],"url":"http://terminology.hl7.org/CodeSystem/research-study-prim-purp-type","identifier":[{"system":"urn:ietf:rfc:3986","value":"urn:oid:2.16.840.1.113883.4.642.1.1250"}],"version":"0.1.0","name":"ResearchStudyPrimaryPurposeType","title":"ResearchStudyPrimaryPurposeType","status":"draft","experimental":false,"date":"2020-04-09T21:10:28+00:00","publisher":"HL7 (FHIR Project)","contact":[{"telecom":[{"system":"url","value":"http://hl7.org/fhir"},{"system":"email","value":"fhir@lists.hl7.org"}]}],"description":"Codes for the main intent of the study.","caseSensitive":true,"valueSet":"http://terminology.hl7.org/ValueSet/research-study-prim-purp-type","content":"complete","concept":[{"code":"treatment","display":"Treatment","definition":"One or more interventions are being evaluated for treating a disease, syndrome, or condition."},{"code":"prevention","display":"Prevention","definition":"One or more interventions are being assessed for preventing the development of a specific disease or health condition."},{"code":"diagnostic","display":"Diagnostic","definition":"One or more interventions are being evaluated for identifying a disease or health condition."},{"code":"supportive-care","display":"Supportive Care","definition":"One or more interventions are evaluated for maximizing comfort, minimizing side effects, or mitigating against a decline in the participant's health or function."},{"code":"screening","display":"Screening","definition":"One or more interventions are assessed or examined for identifying a condition, or risk factors for a condition, in people who are not yet known to have the condition or risk factor."},{"code":"health-services-research","display":"Health Services Research","definition":"One or more interventions for evaluating the delivery, processes, management, organization, or financing of healthcare."},{"code":"basic-science","display":"Basic Science","definition":"One or more interventions for examining the basic mechanism of action (for example, physiology or biomechanics of an intervention)."},{"code":"device-feasibility","display":"Device Feasibility","definition":"An intervention of a device product is being evaluated to determine the feasibility of the product or to test a prototype device and not health outcomes. Such studies are conducted to confirm the design and operating specifications of a device before beginning a full clinical trial."}]}},{"name":"cache-id","valueString":"f7a2d3d6-b705-419a-b131-7120bb379529"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} +{"resourceType":"Parameters","parameter":[{"name":"codeableConcept","valueCodeableConcept":{"coding":[{"code":"diagnostic"}]}},{"name":"valueSetMode","valueString":"CHECK_MEMERSHIP_ONLY"},{"name":"default-to-latest-version","valueBoolean":true},{"name":"valueSet","resource":{"resourceType":"ValueSet","id":"research-study-prim-purp-type","meta":{"lastUpdated":"2019-11-01T09:29:23.356+11:00","profile":["http://hl7.org/fhir/StructureDefinition/shareablevalueset"]},"extension":[{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-wg","valueCode":"brr"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status","valueCode":"trial-use"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm","valueInteger":1}],"url":"http://hl7.org/fhir/ValueSet/research-study-prim-purp-type","identifier":[{"system":"urn:ietf:rfc:3986","value":"urn:oid:2.16.840.1.113883.4.642.3.827"}],"version":"4.0.1","name":"ResearchStudyPrimaryPurposeType","title":"ResearchStudyPrimaryPurposeType","status":"draft","experimental":false,"date":"2019-11-01T09:29:23+11:00","publisher":"HL7 (FHIR Project)","contact":[{"telecom":[{"system":"url","value":"http://hl7.org/fhir"},{"system":"email","value":"fhir@lists.hl7.org"}]}],"description":"Codes for the main intent of the study.","immutable":true,"compose":{"include":[{"system":"http://terminology.hl7.org/CodeSystem/research-study-prim-purp-type"}]}}},{"name":"tx-resource","resource":{"resourceType":"CodeSystem","id":"research-study-prim-purp-type","meta":{"lastUpdated":"2020-04-09T21:10:28.568+00:00"},"text":{"status":"generated","div":"<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://terminology.hl7.org/CodeSystem/research-study-prim-purp-type</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style=\"white-space:nowrap\">treatment<a name=\"research-study-prim-purp-type-treatment\"> </a></td><td>Treatment</td><td>One or more interventions are being evaluated for treating a disease, syndrome, or condition.</td></tr><tr><td style=\"white-space:nowrap\">prevention<a name=\"research-study-prim-purp-type-prevention\"> </a></td><td>Prevention</td><td>One or more interventions are being assessed for preventing the development of a specific disease or health condition.</td></tr><tr><td style=\"white-space:nowrap\">diagnostic<a name=\"research-study-prim-purp-type-diagnostic\"> </a></td><td>Diagnostic</td><td>One or more interventions are being evaluated for identifying a disease or health condition.</td></tr><tr><td style=\"white-space:nowrap\">supportive-care<a name=\"research-study-prim-purp-type-supportive-care\"> </a></td><td>Supportive Care</td><td>One or more interventions are evaluated for maximizing comfort, minimizing side effects, or mitigating against a decline in the participant's health or function.</td></tr><tr><td style=\"white-space:nowrap\">screening<a name=\"research-study-prim-purp-type-screening\"> </a></td><td>Screening</td><td>One or more interventions are assessed or examined for identifying a condition, or risk factors for a condition, in people who are not yet known to have the condition or risk factor.</td></tr><tr><td style=\"white-space:nowrap\">health-services-research<a name=\"research-study-prim-purp-type-health-services-research\"> </a></td><td>Health Services Research</td><td>One or more interventions for evaluating the delivery, processes, management, organization, or financing of healthcare.</td></tr><tr><td style=\"white-space:nowrap\">basic-science<a name=\"research-study-prim-purp-type-basic-science\"> </a></td><td>Basic Science</td><td>One or more interventions for examining the basic mechanism of action (for example, physiology or biomechanics of an intervention).</td></tr><tr><td style=\"white-space:nowrap\">device-feasibility<a name=\"research-study-prim-purp-type-device-feasibility\"> </a></td><td>Device Feasibility</td><td>An intervention of a device product is being evaluated to determine the feasibility of the product or to test a prototype device and not health outcomes. Such studies are conducted to confirm the design and operating specifications of a device before beginning a full clinical trial.</td></tr></table></div>"},"extension":[{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-wg","valueCode":"brr"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status","valueCode":"trial-use"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm","valueInteger":0}],"url":"http://terminology.hl7.org/CodeSystem/research-study-prim-purp-type","identifier":[{"system":"urn:ietf:rfc:3986","value":"urn:oid:2.16.840.1.113883.4.642.1.1250"}],"version":"0.1.0","name":"ResearchStudyPrimaryPurposeType","title":"ResearchStudyPrimaryPurposeType","status":"draft","experimental":false,"date":"2020-04-09T21:10:28+00:00","publisher":"HL7 (FHIR Project)","contact":[{"telecom":[{"system":"url","value":"http://hl7.org/fhir"},{"system":"email","value":"fhir@lists.hl7.org"}]}],"description":"Codes for the main intent of the study.","caseSensitive":true,"valueSet":"http://terminology.hl7.org/ValueSet/research-study-prim-purp-type","content":"complete","concept":[{"code":"treatment","display":"Treatment","definition":"One or more interventions are being evaluated for treating a disease, syndrome, or condition."},{"code":"prevention","display":"Prevention","definition":"One or more interventions are being assessed for preventing the development of a specific disease or health condition."},{"code":"diagnostic","display":"Diagnostic","definition":"One or more interventions are being evaluated for identifying a disease or health condition."},{"code":"supportive-care","display":"Supportive Care","definition":"One or more interventions are evaluated for maximizing comfort, minimizing side effects, or mitigating against a decline in the participant's health or function."},{"code":"screening","display":"Screening","definition":"One or more interventions are assessed or examined for identifying a condition, or risk factors for a condition, in people who are not yet known to have the condition or risk factor."},{"code":"health-services-research","display":"Health Services Research","definition":"One or more interventions for evaluating the delivery, processes, management, organization, or financing of healthcare."},{"code":"basic-science","display":"Basic Science","definition":"One or more interventions for examining the basic mechanism of action (for example, physiology or biomechanics of an intervention)."},{"code":"device-feasibility","display":"Device Feasibility","definition":"An intervention of a device product is being evaluated to determine the feasibility of the product or to test a prototype device and not health outcomes. Such studies are conducted to confirm the design and operating specifications of a device before beginning a full clinical trial."}]}},{"name":"cache-id","valueString":"1bd0ee1e-301d-4730-9f0d-cc7cce05bada"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} </pre> <pre> 200 @@ -661,12 +658,12 @@ connection:keep-alive content-length:351 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:13 GMT -last-modified:Mon, 28 Nov 2022 21:08:13 GMT +date:Fri, 09 Dec 2022 17:30:52 GMT +last-modified:Fri, 09 Dec 2022 17:30:52 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438627 +x-request-id:60-1125438 {"resourceType" : "Parameters","parameter" : [{"name" : "result","valueBoolean" : false},{"name" : "message","valueString" : "The code system '' is not known (encountered paired with code = 'diagnostic'); The code provided (#diagnostic) is not valid in the value set 'ResearchStudyPrimaryPurposeType'"},{"name" : "cause","valueString" : "not-found"}]} </pre> @@ -690,12 +687,12 @@ connection:keep-alive content-length:279 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:14 GMT -last-modified:Mon, 28 Nov 2022 21:08:14 GMT +date:Fri, 09 Dec 2022 17:30:52 GMT +last-modified:Fri, 09 Dec 2022 17:30:52 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438629 +x-request-id:60-1125440 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "TR"},{"name" : "system","valueString" : "http://unitsofmeasure.org"},{"name" : "code","valueString" : "TR"},{"name" : "version","valueString" : "2.0.1"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -708,7 +705,7 @@ Accept: application/fhir+json Content-Type: application/fhir+json;charset=UTF-8 -{"resourceType":"Parameters","parameter":[{"name":"codeableConcept","valueCodeableConcept":{"coding":[{"code":"diagnostic"}]}},{"name":"valueSetMode","valueString":"CHECK_MEMERSHIP_ONLY"},{"name":"default-to-latest-version","valueBoolean":true},{"name":"url","valueUri":"http://hl7.org/fhir/ValueSet/research-study-prim-purp-type|4.0.1"},{"name":"tx-resource","resource":{"resourceType":"CodeSystem","id":"research-study-prim-purp-type","meta":{"lastUpdated":"2020-04-09T21:10:28.568+00:00"},"text":{"status":"generated","div":"<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://terminology.hl7.org/CodeSystem/research-study-prim-purp-type</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style=\"white-space:nowrap\">treatment<a name=\"research-study-prim-purp-type-treatment\"> </a></td><td>Treatment</td><td>One or more interventions are being evaluated for treating a disease, syndrome, or condition.</td></tr><tr><td style=\"white-space:nowrap\">prevention<a name=\"research-study-prim-purp-type-prevention\"> </a></td><td>Prevention</td><td>One or more interventions are being assessed for preventing the development of a specific disease or health condition.</td></tr><tr><td style=\"white-space:nowrap\">diagnostic<a name=\"research-study-prim-purp-type-diagnostic\"> </a></td><td>Diagnostic</td><td>One or more interventions are being evaluated for identifying a disease or health condition.</td></tr><tr><td style=\"white-space:nowrap\">supportive-care<a name=\"research-study-prim-purp-type-supportive-care\"> </a></td><td>Supportive Care</td><td>One or more interventions are evaluated for maximizing comfort, minimizing side effects, or mitigating against a decline in the participant's health or function.</td></tr><tr><td style=\"white-space:nowrap\">screening<a name=\"research-study-prim-purp-type-screening\"> </a></td><td>Screening</td><td>One or more interventions are assessed or examined for identifying a condition, or risk factors for a condition, in people who are not yet known to have the condition or risk factor.</td></tr><tr><td style=\"white-space:nowrap\">health-services-research<a name=\"research-study-prim-purp-type-health-services-research\"> </a></td><td>Health Services Research</td><td>One or more interventions for evaluating the delivery, processes, management, organization, or financing of healthcare.</td></tr><tr><td style=\"white-space:nowrap\">basic-science<a name=\"research-study-prim-purp-type-basic-science\"> </a></td><td>Basic Science</td><td>One or more interventions for examining the basic mechanism of action (for example, physiology or biomechanics of an intervention).</td></tr><tr><td style=\"white-space:nowrap\">device-feasibility<a name=\"research-study-prim-purp-type-device-feasibility\"> </a></td><td>Device Feasibility</td><td>An intervention of a device product is being evaluated to determine the feasibility of the product or to test a prototype device and not health outcomes. Such studies are conducted to confirm the design and operating specifications of a device before beginning a full clinical trial.</td></tr></table></div>"},"extension":[{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-wg","valueCode":"brr"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status","valueCode":"trial-use"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm","valueInteger":0}],"url":"http://terminology.hl7.org/CodeSystem/research-study-prim-purp-type","identifier":[{"system":"urn:ietf:rfc:3986","value":"urn:oid:2.16.840.1.113883.4.642.1.1250"}],"version":"0.1.0","name":"ResearchStudyPrimaryPurposeType","title":"ResearchStudyPrimaryPurposeType","status":"draft","experimental":false,"date":"2020-04-09T21:10:28+00:00","publisher":"HL7 (FHIR Project)","contact":[{"telecom":[{"system":"url","value":"http://hl7.org/fhir"},{"system":"email","value":"fhir@lists.hl7.org"}]}],"description":"Codes for the main intent of the study.","caseSensitive":true,"valueSet":"http://terminology.hl7.org/ValueSet/research-study-prim-purp-type","content":"complete","concept":[{"code":"treatment","display":"Treatment","definition":"One or more interventions are being evaluated for treating a disease, syndrome, or condition."},{"code":"prevention","display":"Prevention","definition":"One or more interventions are being assessed for preventing the development of a specific disease or health condition."},{"code":"diagnostic","display":"Diagnostic","definition":"One or more interventions are being evaluated for identifying a disease or health condition."},{"code":"supportive-care","display":"Supportive Care","definition":"One or more interventions are evaluated for maximizing comfort, minimizing side effects, or mitigating against a decline in the participant's health or function."},{"code":"screening","display":"Screening","definition":"One or more interventions are assessed or examined for identifying a condition, or risk factors for a condition, in people who are not yet known to have the condition or risk factor."},{"code":"health-services-research","display":"Health Services Research","definition":"One or more interventions for evaluating the delivery, processes, management, organization, or financing of healthcare."},{"code":"basic-science","display":"Basic Science","definition":"One or more interventions for examining the basic mechanism of action (for example, physiology or biomechanics of an intervention)."},{"code":"device-feasibility","display":"Device Feasibility","definition":"An intervention of a device product is being evaluated to determine the feasibility of the product or to test a prototype device and not health outcomes. Such studies are conducted to confirm the design and operating specifications of a device before beginning a full clinical trial."}]}},{"name":"cache-id","valueString":"f7a2d3d6-b705-419a-b131-7120bb379529"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} +{"resourceType":"Parameters","parameter":[{"name":"codeableConcept","valueCodeableConcept":{"coding":[{"code":"diagnostic"}]}},{"name":"valueSetMode","valueString":"CHECK_MEMERSHIP_ONLY"},{"name":"default-to-latest-version","valueBoolean":true},{"name":"url","valueUri":"http://hl7.org/fhir/ValueSet/research-study-prim-purp-type|4.0.1"},{"name":"tx-resource","resource":{"resourceType":"CodeSystem","id":"research-study-prim-purp-type","meta":{"lastUpdated":"2020-04-09T21:10:28.568+00:00"},"text":{"status":"generated","div":"<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://terminology.hl7.org/CodeSystem/research-study-prim-purp-type</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style=\"white-space:nowrap\">treatment<a name=\"research-study-prim-purp-type-treatment\"> </a></td><td>Treatment</td><td>One or more interventions are being evaluated for treating a disease, syndrome, or condition.</td></tr><tr><td style=\"white-space:nowrap\">prevention<a name=\"research-study-prim-purp-type-prevention\"> </a></td><td>Prevention</td><td>One or more interventions are being assessed for preventing the development of a specific disease or health condition.</td></tr><tr><td style=\"white-space:nowrap\">diagnostic<a name=\"research-study-prim-purp-type-diagnostic\"> </a></td><td>Diagnostic</td><td>One or more interventions are being evaluated for identifying a disease or health condition.</td></tr><tr><td style=\"white-space:nowrap\">supportive-care<a name=\"research-study-prim-purp-type-supportive-care\"> </a></td><td>Supportive Care</td><td>One or more interventions are evaluated for maximizing comfort, minimizing side effects, or mitigating against a decline in the participant's health or function.</td></tr><tr><td style=\"white-space:nowrap\">screening<a name=\"research-study-prim-purp-type-screening\"> </a></td><td>Screening</td><td>One or more interventions are assessed or examined for identifying a condition, or risk factors for a condition, in people who are not yet known to have the condition or risk factor.</td></tr><tr><td style=\"white-space:nowrap\">health-services-research<a name=\"research-study-prim-purp-type-health-services-research\"> </a></td><td>Health Services Research</td><td>One or more interventions for evaluating the delivery, processes, management, organization, or financing of healthcare.</td></tr><tr><td style=\"white-space:nowrap\">basic-science<a name=\"research-study-prim-purp-type-basic-science\"> </a></td><td>Basic Science</td><td>One or more interventions for examining the basic mechanism of action (for example, physiology or biomechanics of an intervention).</td></tr><tr><td style=\"white-space:nowrap\">device-feasibility<a name=\"research-study-prim-purp-type-device-feasibility\"> </a></td><td>Device Feasibility</td><td>An intervention of a device product is being evaluated to determine the feasibility of the product or to test a prototype device and not health outcomes. Such studies are conducted to confirm the design and operating specifications of a device before beginning a full clinical trial.</td></tr></table></div>"},"extension":[{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-wg","valueCode":"brr"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status","valueCode":"trial-use"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm","valueInteger":0}],"url":"http://terminology.hl7.org/CodeSystem/research-study-prim-purp-type","identifier":[{"system":"urn:ietf:rfc:3986","value":"urn:oid:2.16.840.1.113883.4.642.1.1250"}],"version":"0.1.0","name":"ResearchStudyPrimaryPurposeType","title":"ResearchStudyPrimaryPurposeType","status":"draft","experimental":false,"date":"2020-04-09T21:10:28+00:00","publisher":"HL7 (FHIR Project)","contact":[{"telecom":[{"system":"url","value":"http://hl7.org/fhir"},{"system":"email","value":"fhir@lists.hl7.org"}]}],"description":"Codes for the main intent of the study.","caseSensitive":true,"valueSet":"http://terminology.hl7.org/ValueSet/research-study-prim-purp-type","content":"complete","concept":[{"code":"treatment","display":"Treatment","definition":"One or more interventions are being evaluated for treating a disease, syndrome, or condition."},{"code":"prevention","display":"Prevention","definition":"One or more interventions are being assessed for preventing the development of a specific disease or health condition."},{"code":"diagnostic","display":"Diagnostic","definition":"One or more interventions are being evaluated for identifying a disease or health condition."},{"code":"supportive-care","display":"Supportive Care","definition":"One or more interventions are evaluated for maximizing comfort, minimizing side effects, or mitigating against a decline in the participant's health or function."},{"code":"screening","display":"Screening","definition":"One or more interventions are assessed or examined for identifying a condition, or risk factors for a condition, in people who are not yet known to have the condition or risk factor."},{"code":"health-services-research","display":"Health Services Research","definition":"One or more interventions for evaluating the delivery, processes, management, organization, or financing of healthcare."},{"code":"basic-science","display":"Basic Science","definition":"One or more interventions for examining the basic mechanism of action (for example, physiology or biomechanics of an intervention)."},{"code":"device-feasibility","display":"Device Feasibility","definition":"An intervention of a device product is being evaluated to determine the feasibility of the product or to test a prototype device and not health outcomes. Such studies are conducted to confirm the design and operating specifications of a device before beginning a full clinical trial."}]}},{"name":"cache-id","valueString":"1bd0ee1e-301d-4730-9f0d-cc7cce05bada"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} </pre> <pre> 200 @@ -719,12 +716,12 @@ connection:keep-alive content-length:351 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:14 GMT -last-modified:Mon, 28 Nov 2022 21:08:14 GMT +date:Fri, 09 Dec 2022 17:30:53 GMT +last-modified:Fri, 09 Dec 2022 17:30:53 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438630 +x-request-id:60-1125442 {"resourceType" : "Parameters","parameter" : [{"name" : "result","valueBoolean" : false},{"name" : "message","valueString" : "The code system '' is not known (encountered paired with code = 'diagnostic'); The code provided (#diagnostic) is not valid in the value set 'ResearchStudyPrimaryPurposeType'"},{"name" : "cause","valueString" : "not-found"}]} </pre> @@ -737,7 +734,7 @@ Accept: application/fhir+json Content-Type: application/fhir+json;charset=UTF-8 -{"resourceType":"Parameters","parameter":[{"name":"codeableConcept","valueCodeableConcept":{"coding":[{"code":"diagnostic"}]}},{"name":"valueSetMode","valueString":"CHECK_MEMERSHIP_ONLY"},{"name":"default-to-latest-version","valueBoolean":true},{"name":"url","valueUri":"http://hl7.org/fhir/ValueSet/research-study-prim-purp-type|4.0.1"},{"name":"tx-resource","resource":{"resourceType":"CodeSystem","id":"research-study-prim-purp-type","meta":{"lastUpdated":"2020-04-09T21:10:28.568+00:00"},"text":{"status":"generated","div":"<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://terminology.hl7.org/CodeSystem/research-study-prim-purp-type</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style=\"white-space:nowrap\">treatment<a name=\"research-study-prim-purp-type-treatment\"> </a></td><td>Treatment</td><td>One or more interventions are being evaluated for treating a disease, syndrome, or condition.</td></tr><tr><td style=\"white-space:nowrap\">prevention<a name=\"research-study-prim-purp-type-prevention\"> </a></td><td>Prevention</td><td>One or more interventions are being assessed for preventing the development of a specific disease or health condition.</td></tr><tr><td style=\"white-space:nowrap\">diagnostic<a name=\"research-study-prim-purp-type-diagnostic\"> </a></td><td>Diagnostic</td><td>One or more interventions are being evaluated for identifying a disease or health condition.</td></tr><tr><td style=\"white-space:nowrap\">supportive-care<a name=\"research-study-prim-purp-type-supportive-care\"> </a></td><td>Supportive Care</td><td>One or more interventions are evaluated for maximizing comfort, minimizing side effects, or mitigating against a decline in the participant's health or function.</td></tr><tr><td style=\"white-space:nowrap\">screening<a name=\"research-study-prim-purp-type-screening\"> </a></td><td>Screening</td><td>One or more interventions are assessed or examined for identifying a condition, or risk factors for a condition, in people who are not yet known to have the condition or risk factor.</td></tr><tr><td style=\"white-space:nowrap\">health-services-research<a name=\"research-study-prim-purp-type-health-services-research\"> </a></td><td>Health Services Research</td><td>One or more interventions for evaluating the delivery, processes, management, organization, or financing of healthcare.</td></tr><tr><td style=\"white-space:nowrap\">basic-science<a name=\"research-study-prim-purp-type-basic-science\"> </a></td><td>Basic Science</td><td>One or more interventions for examining the basic mechanism of action (for example, physiology or biomechanics of an intervention).</td></tr><tr><td style=\"white-space:nowrap\">device-feasibility<a name=\"research-study-prim-purp-type-device-feasibility\"> </a></td><td>Device Feasibility</td><td>An intervention of a device product is being evaluated to determine the feasibility of the product or to test a prototype device and not health outcomes. Such studies are conducted to confirm the design and operating specifications of a device before beginning a full clinical trial.</td></tr></table></div>"},"extension":[{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-wg","valueCode":"brr"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status","valueCode":"trial-use"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm","valueInteger":0}],"url":"http://terminology.hl7.org/CodeSystem/research-study-prim-purp-type","identifier":[{"system":"urn:ietf:rfc:3986","value":"urn:oid:2.16.840.1.113883.4.642.1.1250"}],"version":"0.1.0","name":"ResearchStudyPrimaryPurposeType","title":"ResearchStudyPrimaryPurposeType","status":"draft","experimental":false,"date":"2020-04-09T21:10:28+00:00","publisher":"HL7 (FHIR Project)","contact":[{"telecom":[{"system":"url","value":"http://hl7.org/fhir"},{"system":"email","value":"fhir@lists.hl7.org"}]}],"description":"Codes for the main intent of the study.","caseSensitive":true,"valueSet":"http://terminology.hl7.org/ValueSet/research-study-prim-purp-type","content":"complete","concept":[{"code":"treatment","display":"Treatment","definition":"One or more interventions are being evaluated for treating a disease, syndrome, or condition."},{"code":"prevention","display":"Prevention","definition":"One or more interventions are being assessed for preventing the development of a specific disease or health condition."},{"code":"diagnostic","display":"Diagnostic","definition":"One or more interventions are being evaluated for identifying a disease or health condition."},{"code":"supportive-care","display":"Supportive Care","definition":"One or more interventions are evaluated for maximizing comfort, minimizing side effects, or mitigating against a decline in the participant's health or function."},{"code":"screening","display":"Screening","definition":"One or more interventions are assessed or examined for identifying a condition, or risk factors for a condition, in people who are not yet known to have the condition or risk factor."},{"code":"health-services-research","display":"Health Services Research","definition":"One or more interventions for evaluating the delivery, processes, management, organization, or financing of healthcare."},{"code":"basic-science","display":"Basic Science","definition":"One or more interventions for examining the basic mechanism of action (for example, physiology or biomechanics of an intervention)."},{"code":"device-feasibility","display":"Device Feasibility","definition":"An intervention of a device product is being evaluated to determine the feasibility of the product or to test a prototype device and not health outcomes. Such studies are conducted to confirm the design and operating specifications of a device before beginning a full clinical trial."}]}},{"name":"cache-id","valueString":"f7a2d3d6-b705-419a-b131-7120bb379529"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} +{"resourceType":"Parameters","parameter":[{"name":"codeableConcept","valueCodeableConcept":{"coding":[{"code":"diagnostic"}]}},{"name":"valueSetMode","valueString":"CHECK_MEMERSHIP_ONLY"},{"name":"default-to-latest-version","valueBoolean":true},{"name":"url","valueUri":"http://hl7.org/fhir/ValueSet/research-study-prim-purp-type|4.0.1"},{"name":"tx-resource","resource":{"resourceType":"CodeSystem","id":"research-study-prim-purp-type","meta":{"lastUpdated":"2020-04-09T21:10:28.568+00:00"},"text":{"status":"generated","div":"<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://terminology.hl7.org/CodeSystem/research-study-prim-purp-type</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style=\"white-space:nowrap\">treatment<a name=\"research-study-prim-purp-type-treatment\"> </a></td><td>Treatment</td><td>One or more interventions are being evaluated for treating a disease, syndrome, or condition.</td></tr><tr><td style=\"white-space:nowrap\">prevention<a name=\"research-study-prim-purp-type-prevention\"> </a></td><td>Prevention</td><td>One or more interventions are being assessed for preventing the development of a specific disease or health condition.</td></tr><tr><td style=\"white-space:nowrap\">diagnostic<a name=\"research-study-prim-purp-type-diagnostic\"> </a></td><td>Diagnostic</td><td>One or more interventions are being evaluated for identifying a disease or health condition.</td></tr><tr><td style=\"white-space:nowrap\">supportive-care<a name=\"research-study-prim-purp-type-supportive-care\"> </a></td><td>Supportive Care</td><td>One or more interventions are evaluated for maximizing comfort, minimizing side effects, or mitigating against a decline in the participant's health or function.</td></tr><tr><td style=\"white-space:nowrap\">screening<a name=\"research-study-prim-purp-type-screening\"> </a></td><td>Screening</td><td>One or more interventions are assessed or examined for identifying a condition, or risk factors for a condition, in people who are not yet known to have the condition or risk factor.</td></tr><tr><td style=\"white-space:nowrap\">health-services-research<a name=\"research-study-prim-purp-type-health-services-research\"> </a></td><td>Health Services Research</td><td>One or more interventions for evaluating the delivery, processes, management, organization, or financing of healthcare.</td></tr><tr><td style=\"white-space:nowrap\">basic-science<a name=\"research-study-prim-purp-type-basic-science\"> </a></td><td>Basic Science</td><td>One or more interventions for examining the basic mechanism of action (for example, physiology or biomechanics of an intervention).</td></tr><tr><td style=\"white-space:nowrap\">device-feasibility<a name=\"research-study-prim-purp-type-device-feasibility\"> </a></td><td>Device Feasibility</td><td>An intervention of a device product is being evaluated to determine the feasibility of the product or to test a prototype device and not health outcomes. Such studies are conducted to confirm the design and operating specifications of a device before beginning a full clinical trial.</td></tr></table></div>"},"extension":[{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-wg","valueCode":"brr"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status","valueCode":"trial-use"},{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm","valueInteger":0}],"url":"http://terminology.hl7.org/CodeSystem/research-study-prim-purp-type","identifier":[{"system":"urn:ietf:rfc:3986","value":"urn:oid:2.16.840.1.113883.4.642.1.1250"}],"version":"0.1.0","name":"ResearchStudyPrimaryPurposeType","title":"ResearchStudyPrimaryPurposeType","status":"draft","experimental":false,"date":"2020-04-09T21:10:28+00:00","publisher":"HL7 (FHIR Project)","contact":[{"telecom":[{"system":"url","value":"http://hl7.org/fhir"},{"system":"email","value":"fhir@lists.hl7.org"}]}],"description":"Codes for the main intent of the study.","caseSensitive":true,"valueSet":"http://terminology.hl7.org/ValueSet/research-study-prim-purp-type","content":"complete","concept":[{"code":"treatment","display":"Treatment","definition":"One or more interventions are being evaluated for treating a disease, syndrome, or condition."},{"code":"prevention","display":"Prevention","definition":"One or more interventions are being assessed for preventing the development of a specific disease or health condition."},{"code":"diagnostic","display":"Diagnostic","definition":"One or more interventions are being evaluated for identifying a disease or health condition."},{"code":"supportive-care","display":"Supportive Care","definition":"One or more interventions are evaluated for maximizing comfort, minimizing side effects, or mitigating against a decline in the participant's health or function."},{"code":"screening","display":"Screening","definition":"One or more interventions are assessed or examined for identifying a condition, or risk factors for a condition, in people who are not yet known to have the condition or risk factor."},{"code":"health-services-research","display":"Health Services Research","definition":"One or more interventions for evaluating the delivery, processes, management, organization, or financing of healthcare."},{"code":"basic-science","display":"Basic Science","definition":"One or more interventions for examining the basic mechanism of action (for example, physiology or biomechanics of an intervention)."},{"code":"device-feasibility","display":"Device Feasibility","definition":"An intervention of a device product is being evaluated to determine the feasibility of the product or to test a prototype device and not health outcomes. Such studies are conducted to confirm the design and operating specifications of a device before beginning a full clinical trial."}]}},{"name":"cache-id","valueString":"1bd0ee1e-301d-4730-9f0d-cc7cce05bada"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} </pre> <pre> 200 @@ -748,12 +745,12 @@ connection:keep-alive content-length:351 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:14 GMT -last-modified:Mon, 28 Nov 2022 21:08:14 GMT +date:Fri, 09 Dec 2022 17:30:53 GMT +last-modified:Fri, 09 Dec 2022 17:30:53 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438631 +x-request-id:60-1125447 {"resourceType" : "Parameters","parameter" : [{"name" : "result","valueBoolean" : false},{"name" : "message","valueString" : "The code system '' is not known (encountered paired with code = 'diagnostic'); The code provided (#diagnostic) is not valid in the value set 'ResearchStudyPrimaryPurposeType'"},{"name" : "cause","valueString" : "not-found"}]} </pre> @@ -777,12 +774,12 @@ connection:keep-alive content-length:298 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:14 GMT -last-modified:Mon, 28 Nov 2022 21:08:14 GMT +date:Fri, 09 Dec 2022 17:30:53 GMT +last-modified:Fri, 09 Dec 2022 17:30:53 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438633 +x-request-id:60-1125449 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Genetic variant assessment"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "69548-6"},{"name" : "version","valueString" : "2.73"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -806,12 +803,12 @@ connection:keep-alive content-length:280 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:15 GMT -last-modified:Mon, 28 Nov 2022 21:08:15 GMT +date:Fri, 09 Dec 2022 17:30:53 GMT +last-modified:Fri, 09 Dec 2022 17:30:53 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438635 +x-request-id:60-1125452 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Present"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "LA9633-4"},{"name" : "version","valueString" : "2.73"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -835,12 +832,12 @@ connection:keep-alive content-length:284 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:15 GMT -last-modified:Mon, 28 Nov 2022 21:08:15 GMT +date:Fri, 09 Dec 2022 17:30:54 GMT +last-modified:Fri, 09 Dec 2022 17:30:53 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438636 +x-request-id:60-1125453 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Sequencing"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "LA26398-0"},{"name" : "version","valueString" : "2.73"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -864,12 +861,12 @@ connection:keep-alive content-length:289 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:15 GMT -last-modified:Mon, 28 Nov 2022 21:08:15 GMT +date:Fri, 09 Dec 2022 17:30:54 GMT +last-modified:Fri, 09 Dec 2022 17:30:54 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438637 +x-request-id:60-1125455 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Gene studied [ID]"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "48018-6"},{"name" : "version","valueString" : "2.73"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -893,12 +890,12 @@ connection:keep-alive content-length:305 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:15 GMT -last-modified:Mon, 28 Nov 2022 21:08:15 GMT +date:Fri, 09 Dec 2022 17:30:54 GMT +last-modified:Fri, 09 Dec 2022 17:30:54 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438638 +x-request-id:60-1125456 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Cytogenetic (chromosome) location"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "48001-2"},{"name" : "version","valueString" : "2.73"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -922,12 +919,12 @@ connection:keep-alive content-length:295 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:15 GMT -last-modified:Mon, 28 Nov 2022 21:08:15 GMT +date:Fri, 09 Dec 2022 17:30:54 GMT +last-modified:Fri, 09 Dec 2022 17:30:54 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438639 +x-request-id:60-1125458 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Genomic ref allele [ID]"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "69547-8"},{"name" : "version","valueString" : "2.73"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -951,12 +948,12 @@ connection:keep-alive content-length:295 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:15 GMT -last-modified:Mon, 28 Nov 2022 21:08:15 GMT +date:Fri, 09 Dec 2022 17:30:54 GMT +last-modified:Fri, 09 Dec 2022 17:30:54 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438640 +x-request-id:60-1125460 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Genomic alt allele [ID]"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "69551-0"},{"name" : "version","valueString" : "2.73"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -980,12 +977,12 @@ connection:keep-alive content-length:285 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:16 GMT -last-modified:Mon, 28 Nov 2022 21:08:15 GMT +date:Fri, 09 Dec 2022 17:30:55 GMT +last-modified:Fri, 09 Dec 2022 17:30:55 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438641 +x-request-id:60-1125462 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Allelic state"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "53034-5"},{"name" : "version","valueString" : "2.73"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -1009,12 +1006,12 @@ connection:keep-alive content-length:285 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:16 GMT -last-modified:Mon, 28 Nov 2022 21:08:16 GMT +date:Fri, 09 Dec 2022 17:30:55 GMT +last-modified:Fri, 09 Dec 2022 17:30:55 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438643 +x-request-id:60-1125464 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Heterozygous"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "LA6706-1"},{"name" : "version","valueString" : "2.73"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -1038,12 +1035,12 @@ connection:keep-alive content-length:313 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:16 GMT -last-modified:Mon, 28 Nov 2022 21:08:16 GMT +date:Fri, 09 Dec 2022 17:30:55 GMT +last-modified:Fri, 09 Dec 2022 17:30:55 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438644 +x-request-id:60-1125466 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Human reference sequence assembly version"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "62374-4"},{"name" : "version","valueString" : "2.73"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -1067,12 +1064,12 @@ connection:keep-alive content-length:280 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:16 GMT -last-modified:Mon, 28 Nov 2022 21:08:16 GMT +date:Fri, 09 Dec 2022 17:30:55 GMT +last-modified:Fri, 09 Dec 2022 17:30:55 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438645 +x-request-id:60-1125468 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "GRCh37"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "LA14029-5"},{"name" : "version","valueString" : "2.73"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -1096,12 +1093,12 @@ connection:keep-alive content-length:306 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:16 GMT -last-modified:Mon, 28 Nov 2022 21:08:16 GMT +date:Fri, 09 Dec 2022 17:30:56 GMT +last-modified:Fri, 09 Dec 2022 17:30:56 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438646 +x-request-id:60-1125474 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Transcript reference sequence [ID]"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "51958-7"},{"name" : "version","valueString" : "2.73"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -1125,12 +1122,12 @@ connection:keep-alive content-length:291 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:16 GMT -last-modified:Mon, 28 Nov 2022 21:08:16 GMT +date:Fri, 09 Dec 2022 17:30:56 GMT +last-modified:Fri, 09 Dec 2022 17:30:56 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438647 +x-request-id:60-1125475 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "DNA change (c.HGVS)"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "48004-6"},{"name" : "version","valueString" : "2.73"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -1153,9 +1150,9 @@ connection:keep-alive content-length:4242 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:18 GMT +date:Fri, 09 Dec 2022 17:30:58 GMT server:nginx -x-request-id:57-438650 +x-request-id:60-1125483 {"resourceType" : "OperationOutcome","text" : {"status" : "generated","div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>Error parsing JSON source: Unexpected char \"&lt;\" in json stream at Line 0 (path=[])</p></div>"},"issue" : [{"severity" : "error","details" : {"text" : "Error parsing JSON source: Unexpected char \"<\" in json stream at Line 0 (path=[])"},"diagnostics" : "(00000000007FC87C){FHIRServer.exe} [0000000000BFD87C] Unknown function at TMethodImplementationIntercept + $75657C\r\n(000000000033D7AC){FHIRServer.exe} [000000000073E7AC] Unknown function at TMethodImplementationIntercept + $2974AC\r\n(000000000033F46E){FHIRServer.exe} [000000000074046E] Unknown function at TMethodImplementationIntercept + $29916E\r\n(000000000004B6F7){FHIRServer.exe} [000000000044C6F7] Unknown function at __dbk_fcall_wrapper + $2E2F7\r\n(000000000004BFEB){FHIRServer.exe} [000000000044CFEB] Unknown function at __dbk_fcall_wrapper + $2EBEB\r\n(0000000000011276){FHIRServer.exe} [0000000000412276]\r\n(00000000000112B1){FHIRServer.exe} [00000000004122B1]\r\n(00000000007FC87C){FHIRServer.exe} [0000000000BFD87C] Unknown function at TMethodImplementationIntercept + $75657C\r\n(00000000007FC153){FHIRServer.exe} [0000000000BFD153] Unknown function at TMethodImplementationIntercept + $755E53\r\n(00000000007FB7AB){FHIRServer.exe} [0000000000BFC7AB] Unknown function at TMethodImplementationIntercept + $7554AB\r\n(00000000007FCC3E){FHIRServer.exe} [0000000000BFDC3E] Unknown function at TMethodImplementationIntercept + $75693E\r\n(00000000007FD6DD){FHIRServer.exe} [0000000000BFE6DD] Unknown function at TMethodImplementationIntercept + $7573DD\r\n(00000000007FF033){FHIRServer.exe} [0000000000C00033] Unknown function at TMethodImplementationIntercept + $758D33\r\n(00000000008FBBB1){FHIRServer.exe} [0000000000CFCBB1] Unknown function at TMethodImplementationIntercept + $8558B1\r\n(000000000101322C){FHIRServer.exe} [000000000141422C] Unknown function at TMethodImplementationIntercept + $F6CF2C\r\n(0000000000ED1571){FHIRServer.exe} [00000000012D2571] Unknown function at TMethodImplementationIntercept + $E2B271\r\n(0000000000ED3FC5){FHIRServer.exe} [00000000012D4FC5] Unknown function at TMethodImplementationIntercept + $E2DCC5\r\n(000000000109E6D9){FHIRServer.exe} [000000000149F6D9] Unknown function at TMethodImplementationIntercept + $FF83D9\r\n(00000000013DE2D7){FHIRServer.exe} [00000000017DF2D7] Unknown function at TMethodImplementationIntercept + $1337FD7\r\n(00000000011587F2){FHIRServer.exe} [00000000015597F2] Unknown function at TMethodImplementationIntercept + $10B24F2\r\n(0000000001150BC7){FHIRServer.exe} [0000000001551BC7] Unknown function at TMethodImplementationIntercept + $10AA8C7\r\n(00000000023509CA){FHIRServer.exe} [00000000027519CA] Unknown function at TMethodImplementationIntercept + $22AA6CA\r\n(000000000234D561){FHIRServer.exe} [000000000274E561] Unknown function at TMethodImplementationIntercept + $22A7261\r\n(0000000002348313){FHIRServer.exe} [0000000002749313] Unknown function at TMethodImplementationIntercept + $22A2013\r\n(0000000006CAD3CF){FHIRServer.exe} [00000000070AE3CF] Unknown function at TMethodImplementationIntercept + $6C070CF\r\n(000000000025CA0C){FHIRServer.exe} [000000000065DA0C] Unknown function at TMethodImplementationIntercept + $1B670C\r\n(000000000025E666){FHIRServer.exe} [000000000065F666] Unknown function at TMethodImplementationIntercept + $1B8366\r\n(000000000023789E){FHIRServer.exe} [000000000063889E] Unknown function at TMethodImplementationIntercept + $19159E\r\n(0000000000235961){FHIRServer.exe} [0000000000636961] Unknown function at TMethodImplementationIntercept + $18F661\r\n(000000000023CE94){FHIRServer.exe} [000000000063DE94] Unknown function at TMethodImplementationIntercept + $196B94\r\n(000000000023BDBD){FHIRServer.exe} [000000000063CDBD] Unknown function at TMethodImplementationIntercept + $195ABD\r\n(0000000000138173){FHIRServer.exe} [0000000000539173] Unknown function at TMethodImplementationIntercept + $91E73\r\n(0000000000011E3D){FHIRServer.exe} [0000000000412E3D]\r\n(00000000000003D2){KERNEL32.DLL} [00007FFDEFEA13D2] BaseThreadInitThunk + $22\r\n(0000000000014504){ntdll.dll } [00007FFDF0F85504] RtlUserThreadStart + $34\r\n"}]} </pre> @@ -1179,12 +1176,12 @@ connection:keep-alive content-length:317 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:18 GMT -last-modified:Mon, 28 Nov 2022 21:08:18 GMT +date:Fri, 09 Dec 2022 17:30:58 GMT +last-modified:Fri, 09 Dec 2022 17:30:58 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438652 +x-request-id:60-1125488 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Genetic variation clinical significance [Imp]"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "53037-8"},{"name" : "version","valueString" : "2.73"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -1208,12 +1205,12 @@ connection:keep-alive content-length:293 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:18 GMT -last-modified:Mon, 28 Nov 2022 21:08:18 GMT +date:Fri, 09 Dec 2022 17:30:58 GMT +last-modified:Fri, 09 Dec 2022 17:30:58 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438653 +x-request-id:60-1125489 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Unknown Significance"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "LA6682-4"},{"name" : "version","valueString" : "2.73"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -1226,7 +1223,7 @@ Accept: application/fhir+json Content-Type: application/fhir+json;charset=UTF-8 -{"resourceType":"Parameters","parameter":[{"name":"coding","valueCoding":{"system":"http://loinc.org","code":"81247-9"}},{"name":"default-to-latest-version","valueBoolean":true},{"name":"valueSet","resource":{"resourceType":"ValueSet","url":"http://hl7.org/fhir/ValueSet/report-codes--0","version":"4.0.1","status":"active","compose":{"include":[{"system":"http://loinc.org"}]}}},{"name":"cache-id","valueString":"f7a2d3d6-b705-419a-b131-7120bb379529"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} +{"resourceType":"Parameters","parameter":[{"name":"coding","valueCoding":{"system":"http://loinc.org","code":"81247-9"}},{"name":"default-to-latest-version","valueBoolean":true},{"name":"valueSet","resource":{"resourceType":"ValueSet","url":"http://hl7.org/fhir/ValueSet/report-codes--0","version":"4.0.1","status":"active","compose":{"include":[{"system":"http://loinc.org"}]}}},{"name":"cache-id","valueString":"1bd0ee1e-301d-4730-9f0d-cc7cce05bada"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} </pre> <pre> 200 @@ -1237,12 +1234,12 @@ connection:keep-alive content-length:270 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:18 GMT -last-modified:Mon, 28 Nov 2022 21:08:18 GMT +date:Fri, 09 Dec 2022 17:30:58 GMT +last-modified:Fri, 09 Dec 2022 17:30:58 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438654 +x-request-id:60-1125490 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Master HL7 genetic variant reporting panel"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "81247-9"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -1255,7 +1252,7 @@ Accept: application/fhir+json Content-Type: application/fhir+json;charset=UTF-8 -{"resourceType":"Parameters","parameter":[{"name":"coding","valueCoding":{"system":"http://loinc.org","code":"81247-9","display":"Master HL7 genetic variant reporting panel"}},{"name":"valueSetMode","valueString":"NO_MEMBERSHIP_CHECK"},{"name":"default-to-latest-version","valueBoolean":true},{"name":"valueSet","resource":{"resourceType":"ValueSet","id":"report-codes","meta":{"lastUpdated":"2019-11-01T09:29:23.356+11:00","profile":["http://hl7.org/fhir/StructureDefinition/shareablevalueset"]},"extension":[{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-wg","valueCode":"oo"}],"url":"http://hl7.org/fhir/ValueSet/report-codes","identifier":[{"system":"urn:ietf:rfc:3986","value":"urn:oid:2.16.840.1.113883.4.642.3.233"}],"version":"4.0.1","name":"LOINCDiagnosticReportCodes","title":"LOINC Diagnostic Report Codes","status":"draft","experimental":false,"date":"2019-11-01T09:29:23+11:00","publisher":"FHIR Project team","contact":[{"telecom":[{"system":"url","value":"http://hl7.org/fhir"}]}],"description":"This value set includes LOINC codes that relate to Diagnostic Observations.","copyright":"This content from LOINC® is copyright © 1995 Regenstrief Institute, Inc. and the LOINC Committee, and available at no cost under the license at http://loinc.org/terms-of-use.","compose":{"include":[{"system":"http://loinc.org"}]}}},{"name":"cache-id","valueString":"f7a2d3d6-b705-419a-b131-7120bb379529"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} +{"resourceType":"Parameters","parameter":[{"name":"coding","valueCoding":{"system":"http://loinc.org","code":"81247-9","display":"Master HL7 genetic variant reporting panel"}},{"name":"valueSetMode","valueString":"NO_MEMBERSHIP_CHECK"},{"name":"default-to-latest-version","valueBoolean":true},{"name":"valueSet","resource":{"resourceType":"ValueSet","id":"report-codes","meta":{"lastUpdated":"2019-11-01T09:29:23.356+11:00","profile":["http://hl7.org/fhir/StructureDefinition/shareablevalueset"]},"extension":[{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-wg","valueCode":"oo"}],"url":"http://hl7.org/fhir/ValueSet/report-codes","identifier":[{"system":"urn:ietf:rfc:3986","value":"urn:oid:2.16.840.1.113883.4.642.3.233"}],"version":"4.0.1","name":"LOINCDiagnosticReportCodes","title":"LOINC Diagnostic Report Codes","status":"draft","experimental":false,"date":"2019-11-01T09:29:23+11:00","publisher":"FHIR Project team","contact":[{"telecom":[{"system":"url","value":"http://hl7.org/fhir"}]}],"description":"This value set includes LOINC codes that relate to Diagnostic Observations.","copyright":"This content from LOINC® is copyright © 1995 Regenstrief Institute, Inc. and the LOINC Committee, and available at no cost under the license at http://loinc.org/terms-of-use.","compose":{"include":[{"system":"http://loinc.org"}]}}},{"name":"cache-id","valueString":"1bd0ee1e-301d-4730-9f0d-cc7cce05bada"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} </pre> <pre> 200 @@ -1266,12 +1263,12 @@ connection:keep-alive content-length:314 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:18 GMT -last-modified:Mon, 28 Nov 2022 21:08:18 GMT +date:Fri, 09 Dec 2022 17:30:58 GMT +last-modified:Fri, 09 Dec 2022 17:30:58 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438656 +x-request-id:60-1125491 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Master HL7 genetic variant reporting panel"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "81247-9"},{"name" : "version","valueString" : "2.73"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -1295,12 +1292,12 @@ connection:keep-alive content-length:314 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:19 GMT -last-modified:Mon, 28 Nov 2022 21:08:19 GMT +date:Fri, 09 Dec 2022 17:30:58 GMT +last-modified:Fri, 09 Dec 2022 17:30:58 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438658 +x-request-id:60-1125492 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "Master HL7 genetic variant reporting panel"},{"name" : "system","valueString" : "http://loinc.org"},{"name" : "code","valueString" : "81247-9"},{"name" : "version","valueString" : "2.73"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -1324,12 +1321,12 @@ connection:keep-alive content-length:259 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:34 GMT -last-modified:Mon, 28 Nov 2022 21:08:33 GMT +date:Fri, 09 Dec 2022 17:31:14 GMT +last-modified:Fri, 09 Dec 2022 17:31:13 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438685 +x-request-id:60-1125517 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "World"},{"name" : "system","valueString" : "http://unstats.un.org/unsd/methods/m49/m49.htm"},{"name" : "code","valueString" : "001"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -1342,7 +1339,7 @@ Accept: application/fhir+json Content-Type: application/fhir+json;charset=UTF-8 -{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"},{"name":"includeDefinition","valueBoolean":false},{"name":"excludeNested","valueBoolean":true},{"name":"valueSet","resource":{"resourceType":"ValueSet","id":"example-study-data-dictionary-case-control-vs-1","text":{"status":"generated","div":"<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include these codes as defined in <code>https://uts.nlm.nih.gov/uts/umls</code><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C99269</td><td>Case</td></tr><tr><td>C99270</td><td>Control</td></tr></table></li></ul></div>"},"url":"https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1","version":"0.2.0","name":"ExampleStudyDataDictionaryCaseControlVS1","title":"Case/Control Vars for 'status' categoricals","status":"draft","date":"2022-11-28T21:07:57+00:00","publisher":"NCPI FHIR Working Group","contact":[{"name":"NCPI FHIR Working Group","telecom":[{"system":"url","value":"https://github.com/nih-ncpi"}]},{"name":"Meen Chul Kim","telecom":[{"system":"email","value":"meenchul@d3b.center","use":"work"}]}],"description":"Example ValueSet listing all possible 'values' from the Case/Control variable.","compose":{"include":[{"system":"https://uts.nlm.nih.gov/uts/umls","concept":[{"code":"C99269","display":"Case"},{"code":"C99270","display":"Control"}]}]}}},{"name":"_limit","valueString":"1000"},{"name":"_incomplete","valueString":"true"}]} +{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"},{"name":"includeDefinition","valueBoolean":false},{"name":"excludeNested","valueBoolean":true},{"name":"valueSet","resource":{"resourceType":"ValueSet","id":"example-study-data-dictionary-case-control-vs-1","text":{"status":"generated","div":"<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include these codes as defined in <code>https://uts.nlm.nih.gov/uts/umls</code><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C99269</td><td>Case</td></tr><tr><td>C99270</td><td>Control</td></tr></table></li></ul></div>"},"url":"https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1","version":"0.2.0","name":"ExampleStudyDataDictionaryCaseControlVS1","title":"Case/Control Vars for 'status' categoricals","status":"draft","date":"2022-12-09T17:30:30+00:00","publisher":"NCPI FHIR Working Group","contact":[{"name":"NCPI FHIR Working Group","telecom":[{"system":"url","value":"https://github.com/nih-ncpi"}]},{"name":"Meen Chul Kim","telecom":[{"system":"email","value":"meenchul@d3b.center","use":"work"}]}],"description":"Example ValueSet listing all possible 'values' from the Case/Control variable.","compose":{"include":[{"system":"https://uts.nlm.nih.gov/uts/umls","concept":[{"code":"C99269","display":"Case"},{"code":"C99270","display":"Control"}]}]}}},{"name":"_limit","valueString":"1000"},{"name":"_incomplete","valueString":"true"}]} </pre> <pre> 422 @@ -1352,9 +1349,9 @@ connection:keep-alive content-length:3656 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:41 GMT +date:Fri, 09 Dec 2022 17:31:20 GMT server:nginx -x-request-id:57-438706 +x-request-id:60-1125531 {"resourceType" : "OperationOutcome","text" : {"status" : "generated","div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls</p></div>"},"issue" : [{"severity" : "error","code" : "not-supported","details" : {"text" : "Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls"},"diagnostics" : "(0000000000ECECED){FHIRServer.exe} [00000000012CFCED] Unknown function at TMethodImplementationIntercept + $E289ED\r\n(000000000033D7AC){FHIRServer.exe} [000000000073E7AC] Unknown function at TMethodImplementationIntercept + $2974AC\r\n(000000000033F46E){FHIRServer.exe} [000000000074046E] Unknown function at TMethodImplementationIntercept + $29916E\r\n(000000000004B6F7){FHIRServer.exe} [000000000044C6F7] Unknown function at __dbk_fcall_wrapper + $2E2F7\r\n(000000000004BFEB){FHIRServer.exe} [000000000044CFEB] Unknown function at __dbk_fcall_wrapper + $2EBEB\r\n(0000000000011276){FHIRServer.exe} [0000000000412276]\r\n(00000000000112B1){FHIRServer.exe} [00000000004122B1]\r\n(0000000000ECECED){FHIRServer.exe} [00000000012CFCED] Unknown function at TMethodImplementationIntercept + $E289ED\r\n(0000000000EDAEDE){FHIRServer.exe} [00000000012DBEDE] Unknown function at TMethodImplementationIntercept + $E34BDE\r\n(0000000000ED861B){FHIRServer.exe} [00000000012D961B] Unknown function at TMethodImplementationIntercept + $E3231B\r\n(0000000000ED72AF){FHIRServer.exe} [00000000012D82AF] Unknown function at TMethodImplementationIntercept + $E30FAF\r\n(000000000109CE14){FHIRServer.exe} [000000000149DE14] Unknown function at TMethodImplementationIntercept + $FF6B14\r\n(000000000109C5C4){FHIRServer.exe} [000000000149D5C4] Unknown function at TMethodImplementationIntercept + $FF62C4\r\n(00000000013DCA77){FHIRServer.exe} [00000000017DDA77] Unknown function at TMethodImplementationIntercept + $1336777\r\n(00000000011587F2){FHIRServer.exe} [00000000015597F2] Unknown function at TMethodImplementationIntercept + $10B24F2\r\n(0000000001150BC7){FHIRServer.exe} [0000000001551BC7] Unknown function at TMethodImplementationIntercept + $10AA8C7\r\n(00000000023509CA){FHIRServer.exe} [00000000027519CA] Unknown function at TMethodImplementationIntercept + $22AA6CA\r\n(000000000234D561){FHIRServer.exe} [000000000274E561] Unknown function at TMethodImplementationIntercept + $22A7261\r\n(0000000002348313){FHIRServer.exe} [0000000002749313] Unknown function at TMethodImplementationIntercept + $22A2013\r\n(0000000006CAD3CF){FHIRServer.exe} [00000000070AE3CF] Unknown function at TMethodImplementationIntercept + $6C070CF\r\n(000000000025CA0C){FHIRServer.exe} [000000000065DA0C] Unknown function at TMethodImplementationIntercept + $1B670C\r\n(000000000025E666){FHIRServer.exe} [000000000065F666] Unknown function at TMethodImplementationIntercept + $1B8366\r\n(000000000023789E){FHIRServer.exe} [000000000063889E] Unknown function at TMethodImplementationIntercept + $19159E\r\n(0000000000235961){FHIRServer.exe} [0000000000636961] Unknown function at TMethodImplementationIntercept + $18F661\r\n(000000000023CE94){FHIRServer.exe} [000000000063DE94] Unknown function at TMethodImplementationIntercept + $196B94\r\n(000000000023BDBD){FHIRServer.exe} [000000000063CDBD] Unknown function at TMethodImplementationIntercept + $195ABD\r\n(0000000000138173){FHIRServer.exe} [0000000000539173] Unknown function at TMethodImplementationIntercept + $91E73\r\n(0000000000011E3D){FHIRServer.exe} [0000000000412E3D]\r\n(00000000000003D2){KERNEL32.DLL} [00007FFDEFEA13D2] BaseThreadInitThunk + $22\r\n(0000000000014504){ntdll.dll } [00007FFDF0F85504] RtlUserThreadStart + $34\r\n"}]} </pre> @@ -1377,9 +1374,9 @@ connection:keep-alive content-length:3656 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:48 GMT +date:Fri, 09 Dec 2022 17:31:27 GMT server:nginx -x-request-id:57-438723 +x-request-id:60-1125557 {"resourceType" : "OperationOutcome","text" : {"status" : "generated","div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls</p></div>"},"issue" : [{"severity" : "error","code" : "not-supported","details" : {"text" : "Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls"},"diagnostics" : "(0000000000ECECED){FHIRServer.exe} [00000000012CFCED] Unknown function at TMethodImplementationIntercept + $E289ED\r\n(000000000033D7AC){FHIRServer.exe} [000000000073E7AC] Unknown function at TMethodImplementationIntercept + $2974AC\r\n(000000000033F46E){FHIRServer.exe} [000000000074046E] Unknown function at TMethodImplementationIntercept + $29916E\r\n(000000000004B6F7){FHIRServer.exe} [000000000044C6F7] Unknown function at __dbk_fcall_wrapper + $2E2F7\r\n(000000000004BFEB){FHIRServer.exe} [000000000044CFEB] Unknown function at __dbk_fcall_wrapper + $2EBEB\r\n(0000000000011276){FHIRServer.exe} [0000000000412276]\r\n(00000000000112B1){FHIRServer.exe} [00000000004122B1]\r\n(0000000000ECECED){FHIRServer.exe} [00000000012CFCED] Unknown function at TMethodImplementationIntercept + $E289ED\r\n(0000000000EDAEDE){FHIRServer.exe} [00000000012DBEDE] Unknown function at TMethodImplementationIntercept + $E34BDE\r\n(0000000000ED861B){FHIRServer.exe} [00000000012D961B] Unknown function at TMethodImplementationIntercept + $E3231B\r\n(0000000000ED72AF){FHIRServer.exe} [00000000012D82AF] Unknown function at TMethodImplementationIntercept + $E30FAF\r\n(000000000109CE14){FHIRServer.exe} [000000000149DE14] Unknown function at TMethodImplementationIntercept + $FF6B14\r\n(000000000109C5C4){FHIRServer.exe} [000000000149D5C4] Unknown function at TMethodImplementationIntercept + $FF62C4\r\n(00000000013DCA77){FHIRServer.exe} [00000000017DDA77] Unknown function at TMethodImplementationIntercept + $1336777\r\n(00000000011587F2){FHIRServer.exe} [00000000015597F2] Unknown function at TMethodImplementationIntercept + $10B24F2\r\n(0000000001150BC7){FHIRServer.exe} [0000000001551BC7] Unknown function at TMethodImplementationIntercept + $10AA8C7\r\n(00000000023509CA){FHIRServer.exe} [00000000027519CA] Unknown function at TMethodImplementationIntercept + $22AA6CA\r\n(000000000234D561){FHIRServer.exe} [000000000274E561] Unknown function at TMethodImplementationIntercept + $22A7261\r\n(0000000002348313){FHIRServer.exe} [0000000002749313] Unknown function at TMethodImplementationIntercept + $22A2013\r\n(0000000006CAD3CF){FHIRServer.exe} [00000000070AE3CF] Unknown function at TMethodImplementationIntercept + $6C070CF\r\n(000000000025CA0C){FHIRServer.exe} [000000000065DA0C] Unknown function at TMethodImplementationIntercept + $1B670C\r\n(000000000025E666){FHIRServer.exe} [000000000065F666] Unknown function at TMethodImplementationIntercept + $1B8366\r\n(000000000023789E){FHIRServer.exe} [000000000063889E] Unknown function at TMethodImplementationIntercept + $19159E\r\n(0000000000235961){FHIRServer.exe} [0000000000636961] Unknown function at TMethodImplementationIntercept + $18F661\r\n(000000000023CE94){FHIRServer.exe} [000000000063DE94] Unknown function at TMethodImplementationIntercept + $196B94\r\n(000000000023BDBD){FHIRServer.exe} [000000000063CDBD] Unknown function at TMethodImplementationIntercept + $195ABD\r\n(0000000000138173){FHIRServer.exe} [0000000000539173] Unknown function at TMethodImplementationIntercept + $91E73\r\n(0000000000011E3D){FHIRServer.exe} [0000000000412E3D]\r\n(00000000000003D2){KERNEL32.DLL} [00007FFDEFEA13D2] BaseThreadInitThunk + $22\r\n(0000000000014504){ntdll.dll } [00007FFDF0F85504] RtlUserThreadStart + $34\r\n"}]} </pre> @@ -1392,7 +1389,7 @@ Accept: application/fhir+json Content-Type: application/fhir+json;charset=UTF-8 -{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"},{"name":"includeDefinition","valueBoolean":false},{"name":"excludeNested","valueBoolean":false},{"name":"incomplete-ok","valueBoolean":true},{"name":"tx-resource","resource":{"resourceType":"CodeSystem","id":"hpo","text":{"status":"generated","div":"<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Properties</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Type</b></td><td><b>Description</b></td></tr><tr><td>parent</td><td>code</td><td>Parent codes.</td></tr><tr><td>imported</td><td>boolean</td><td>Indicates if the concept is imported from another code system.</td></tr><tr><td>root</td><td>boolean</td><td>Indicates if this concept is a root concept (i.e. Thing is equivalent or a direct parent)</td></tr><tr><td>deprecated</td><td>boolean</td><td>Indicates if this concept is deprecated.</td></tr></table><p><b>Filters</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Description</b></td><td><b>operator</b></td><td><b>Value</b></td></tr><tr><td>root</td><td/><td>= </td><td>True or false.</td></tr><tr><td>deprecated</td><td/><td>= </td><td>True or false.</td></tr><tr><td>imported</td><td/><td>= </td><td>True or false</td></tr></table><p>This code system <code>http://purl.obolibrary.org/obo/hp.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">HP:0000365<a name=\"hpo-HP.580000365\"> </a></td><td>Hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002564<a name=\"hpo-HP.580002564\"> </a></td><td>obsolete Malformation of the heart and great vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0001028<a name=\"hpo-HP.580001028\"> </a></td><td>Hemangioma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000476<a name=\"hpo-HP.580000476\"> </a></td><td>Cystic hygroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000568<a name=\"hpo-HP.580000568\"> </a></td><td>Microphthalmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000518<a name=\"hpo-HP.580000518\"> </a></td><td>Cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000612<a name=\"hpo-HP.580000612\"> </a></td><td>Iris coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000567<a name=\"hpo-HP.580000567\"> </a></td><td>Chorioretinal coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000316<a name=\"hpo-HP.580000316\"> </a></td><td>Hypertelorism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000482<a name=\"hpo-HP.580000482\"> </a></td><td>Microcornea</td></tr><tr><td style=\"white-space:nowrap\">HP:0000588<a name=\"hpo-HP.580000588\"> </a></td><td>Optic nerve coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0004426<a name=\"hpo-HP.580004426\"> </a></td><td>Abnormality of the cheek</td></tr><tr><td style=\"white-space:nowrap\">HP:0009125<a name=\"hpo-HP.580009125\"> </a></td><td>Lipodystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002023<a name=\"hpo-HP.580002023\"> </a></td><td>Anal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003468<a name=\"hpo-HP.580003468\"> </a></td><td>Abnormal vertebral morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000545<a name=\"hpo-HP.580000545\"> </a></td><td>Myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000122<a name=\"hpo-HP.580000122\"> </a></td><td>Unilateral renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002143<a name=\"hpo-HP.580002143\"> </a></td><td>Abnormality of the spinal cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0003508<a name=\"hpo-HP.580003508\"> </a></td><td>Proportionate short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0000271<a name=\"hpo-HP.580000271\"> </a></td><td>Abnormality of the face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000637<a name=\"hpo-HP.580000637\"> </a></td><td>Long palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000492<a name=\"hpo-HP.580000492\"> </a></td><td>Abnormal eyelid morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000389<a name=\"hpo-HP.580000389\"> </a></td><td>Chronic otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0000400<a name=\"hpo-HP.580000400\"> </a></td><td>Macrotia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000405<a name=\"hpo-HP.580000405\"> </a></td><td>Conductive hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0012712<a name=\"hpo-HP.580012712\"> </a></td><td>Mild hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0005280<a name=\"hpo-HP.580005280\"> </a></td><td>Depressed nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000431<a name=\"hpo-HP.580000431\"> </a></td><td>Wide nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000319<a name=\"hpo-HP.580000319\"> </a></td><td>Smooth philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000175<a name=\"hpo-HP.580000175\"> </a></td><td>Cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001611<a name=\"hpo-HP.580001611\"> </a></td><td>Nasal speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0002099<a name=\"hpo-HP.580002099\"> </a></td><td>Asthma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001397<a name=\"hpo-HP.580001397\"> </a></td><td>Hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001081<a name=\"hpo-HP.580001081\"> </a></td><td>Cholelithiasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002650<a name=\"hpo-HP.580002650\"> </a></td><td>Scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001212<a name=\"hpo-HP.580001212\"> </a></td><td>Prominent fingertip pads</td></tr><tr><td style=\"white-space:nowrap\">HP:0001328<a name=\"hpo-HP.580001328\"> </a></td><td>Specific learning disability</td></tr><tr><td style=\"white-space:nowrap\">HP:0000824<a name=\"hpo-HP.580000824\"> </a></td><td>Growth hormone deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002607<a name=\"hpo-HP.580002607\"> </a></td><td>Bowel incontinence</td></tr><tr><td style=\"white-space:nowrap\">HP:0100731<a name=\"hpo-HP.580100731\"> </a></td><td>Transverse facial cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0000528<a name=\"hpo-HP.580000528\"> </a></td><td>Anophthalmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000601<a name=\"hpo-HP.580000601\"> </a></td><td>Hypotelorism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000369<a name=\"hpo-HP.580000369\"> </a></td><td>Low-set ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001274<a name=\"hpo-HP.580001274\"> </a></td><td>Agenesis of corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002084<a name=\"hpo-HP.580002084\"> </a></td><td>Encephalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0007033<a name=\"hpo-HP.580007033\"> </a></td><td>Cerebellar dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100336<a name=\"hpo-HP.580100336\"> </a></td><td>Bilateral cleft lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0100337<a name=\"hpo-HP.580100337\"> </a></td><td>Bilateral cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001511<a name=\"hpo-HP.580001511\"> </a></td><td>Intrauterine growth retardation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011451<a name=\"hpo-HP.580011451\"> </a></td><td>Congenital microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000324<a name=\"hpo-HP.580000324\"> </a></td><td>Facial asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0000581<a name=\"hpo-HP.580000581\"> </a></td><td>Blepharophimosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000508<a name=\"hpo-HP.580000508\"> </a></td><td>Ptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008551<a name=\"hpo-HP.580008551\"> </a></td><td>Microtia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001631<a name=\"hpo-HP.580001631\"> </a></td><td>Atrial septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0000085<a name=\"hpo-HP.580000085\"> </a></td><td>Horseshoe kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0011927<a name=\"hpo-HP.580011927\"> </a></td><td>Short digit</td></tr><tr><td style=\"white-space:nowrap\">HP:0001156<a name=\"hpo-HP.580001156\"> </a></td><td>Brachydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002066<a name=\"hpo-HP.580002066\"> </a></td><td>Gait ataxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001250<a name=\"hpo-HP.580001250\"> </a></td><td>Seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001263<a name=\"hpo-HP.580001263\"> </a></td><td>Global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0001562<a name=\"hpo-HP.580001562\"> </a></td><td>Oligohydramnios</td></tr><tr><td style=\"white-space:nowrap\">HP:0001195<a name=\"hpo-HP.580001195\"> </a></td><td>Single umbilical artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0006349<a name=\"hpo-HP.580006349\"> </a></td><td>Agenesis of permanent teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000668<a name=\"hpo-HP.580000668\"> </a></td><td>Hypodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000677<a name=\"hpo-HP.580000677\"> </a></td><td>Oligodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001252<a name=\"hpo-HP.580001252\"> </a></td><td>Muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003429<a name=\"hpo-HP.580003429\"> </a></td><td>CNS hypomyelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0010864<a name=\"hpo-HP.580010864\"> </a></td><td>Intellectual disability, severe</td></tr><tr><td style=\"white-space:nowrap\">HP:0004325<a name=\"hpo-HP.580004325\"> </a></td><td>Decreased body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000666<a name=\"hpo-HP.580000666\"> </a></td><td>Horizontal nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000218<a name=\"hpo-HP.580000218\"> </a></td><td>High palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0010809<a name=\"hpo-HP.580010809\"> </a></td><td>Broad uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000767<a name=\"hpo-HP.580000767\"> </a></td><td>Pectus excavatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0003691<a name=\"hpo-HP.580003691\"> </a></td><td>Scapular winging</td></tr><tr><td style=\"white-space:nowrap\">HP:0002616<a name=\"hpo-HP.580002616\"> </a></td><td>Aortic root aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0001601<a name=\"hpo-HP.580001601\"> </a></td><td>Laryngomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002021<a name=\"hpo-HP.580002021\"> </a></td><td>Pyloric stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001388<a name=\"hpo-HP.580001388\"> </a></td><td>Joint laxity</td></tr><tr><td style=\"white-space:nowrap\">HP:0001187<a name=\"hpo-HP.580001187\"> </a></td><td>Hyperextensibility of the finger joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0000741<a name=\"hpo-HP.580000741\"> </a></td><td>Apathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000817<a name=\"hpo-HP.580000817\"> </a></td><td>Poor eye contact</td></tr><tr><td style=\"white-space:nowrap\">HP:0000821<a name=\"hpo-HP.580000821\"> </a></td><td>Hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000002<a name=\"hpo-HP.580000002\"> </a></td><td>Abnormality of body height</td></tr><tr><td style=\"white-space:nowrap\">HP:0000079<a name=\"hpo-HP.580000079\"> </a></td><td>Abnormality of the urinary system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000164<a name=\"hpo-HP.580000164\"> </a></td><td>Abnormality of the dentition</td></tr><tr><td style=\"white-space:nowrap\">HP:0000364<a name=\"hpo-HP.580000364\"> </a></td><td>Hearing abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000366<a name=\"hpo-HP.580000366\"> </a></td><td>Abnormality of the nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0000464<a name=\"hpo-HP.580000464\"> </a></td><td>Abnormality of the neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000707<a name=\"hpo-HP.580000707\"> </a></td><td>Abnormality of the nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000708<a name=\"hpo-HP.580000708\"> </a></td><td>Behavioral abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000769<a name=\"hpo-HP.580000769\"> </a></td><td>Abnormality of the breast</td></tr><tr><td style=\"white-space:nowrap\">HP:0000772<a name=\"hpo-HP.580000772\"> </a></td><td>Abnormality of the ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000775<a name=\"hpo-HP.580000775\"> </a></td><td>Abnormality of the diaphragm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000889<a name=\"hpo-HP.580000889\"> </a></td><td>Abnormality of the clavicle</td></tr><tr><td style=\"white-space:nowrap\">HP:0000925<a name=\"hpo-HP.580000925\"> </a></td><td>Abnormality of the vertebral column</td></tr><tr><td style=\"white-space:nowrap\">HP:0001080<a name=\"hpo-HP.580001080\"> </a></td><td>Biliary tract abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001392<a name=\"hpo-HP.580001392\"> </a></td><td>Abnormality of the liver</td></tr><tr><td style=\"white-space:nowrap\">HP:0001438<a name=\"hpo-HP.580001438\"> </a></td><td>Abnormal abdomen morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001608<a name=\"hpo-HP.580001608\"> </a></td><td>Abnormality of the voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001627<a name=\"hpo-HP.580001627\"> </a></td><td>Abnormal heart morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001732<a name=\"hpo-HP.580001732\"> </a></td><td>Abnormality of the pancreas</td></tr><tr><td style=\"white-space:nowrap\">HP:0001739<a name=\"hpo-HP.580001739\"> </a></td><td>Abnormality of the nasopharynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0001743<a name=\"hpo-HP.580001743\"> </a></td><td>Abnormality of the spleen</td></tr><tr><td style=\"white-space:nowrap\">HP:0001760<a name=\"hpo-HP.580001760\"> </a></td><td>Abnormal foot morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001871<a name=\"hpo-HP.580001871\"> </a></td><td>Abnormality of blood and blood-forming tissues</td></tr><tr><td style=\"white-space:nowrap\">HP:0002031<a name=\"hpo-HP.580002031\"> </a></td><td>Abnormal esophagus morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002244<a name=\"hpo-HP.580002244\"> </a></td><td>Abnormality of the small intestine</td></tr><tr><td style=\"white-space:nowrap\">HP:0002246<a name=\"hpo-HP.580002246\"> </a></td><td>Abnormality of the duodenum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002250<a name=\"hpo-HP.580002250\"> </a></td><td>Abnormal large intestine morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002644<a name=\"hpo-HP.580002644\"> </a></td><td>Abnormality of pelvic girdle bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002664<a name=\"hpo-HP.580002664\"> </a></td><td>Neoplasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0002715<a name=\"hpo-HP.580002715\"> </a></td><td>Abnormality of the immune system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002814<a name=\"hpo-HP.580002814\"> </a></td><td>Abnormality of the lower limb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002817<a name=\"hpo-HP.580002817\"> </a></td><td>Abnormality of the upper limb</td></tr><tr><td style=\"white-space:nowrap\">HP:0005483<a name=\"hpo-HP.580005483\"> </a></td><td>Abnormal epiglottis morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008777<a name=\"hpo-HP.580008777\"> </a></td><td>Abnormal vocal cord morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011844<a name=\"hpo-HP.580011844\"> </a></td><td>Abnormal appendicular skeleton morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012732<a name=\"hpo-HP.580012732\"> </a></td><td>Anorectal anomaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001508<a name=\"hpo-HP.580001508\"> </a></td><td>Failure to thrive</td></tr><tr><td style=\"white-space:nowrap\">HP:0002902<a name=\"hpo-HP.580002902\"> </a></td><td>Hyponatremia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012236<a name=\"hpo-HP.580012236\"> </a></td><td>Elevated sweat chloride</td></tr><tr><td style=\"white-space:nowrap\">HP:0000347<a name=\"hpo-HP.580000347\"> </a></td><td>Micrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000926<a name=\"hpo-HP.580000926\"> </a></td><td>Platyspondyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001371<a name=\"hpo-HP.580001371\"> </a></td><td>Flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0001875<a name=\"hpo-HP.580001875\"> </a></td><td>Neutropenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001888<a name=\"hpo-HP.580001888\"> </a></td><td>Lymphopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002857<a name=\"hpo-HP.580002857\"> </a></td><td>Genu valgum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002986<a name=\"hpo-HP.580002986\"> </a></td><td>Radial bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003015<a name=\"hpo-HP.580003015\"> </a></td><td>Flared metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003025<a name=\"hpo-HP.580003025\"> </a></td><td>Metaphyseal irregularity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003097<a name=\"hpo-HP.580003097\"> </a></td><td>Short femur</td></tr><tr><td style=\"white-space:nowrap\">HP:0003300<a name=\"hpo-HP.580003300\"> </a></td><td>Ovoid vertebral bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0003307<a name=\"hpo-HP.580003307\"> </a></td><td>Hyperlordosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004209<a name=\"hpo-HP.580004209\"> </a></td><td>Clinodactyly of the 5th finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0004322<a name=\"hpo-HP.580004322\"> </a></td><td>Short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0005792<a name=\"hpo-HP.580005792\"> </a></td><td>Short humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0006248<a name=\"hpo-HP.580006248\"> </a></td><td>Limited wrist movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0000944<a name=\"hpo-HP.580000944\"> </a></td><td>Abnormality of the metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011921<a name=\"hpo-HP.580011921\"> </a></td><td>Exudative pleural effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0003043<a name=\"hpo-HP.580003043\"> </a></td><td>Abnormality of the shoulder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000290<a name=\"hpo-HP.580000290\"> </a></td><td>Abnormality of the forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0005288<a name=\"hpo-HP.580005288\"> </a></td><td>Abnormality of the nares</td></tr><tr><td style=\"white-space:nowrap\">HP:0000234<a name=\"hpo-HP.580000234\"> </a></td><td>Abnormality of the head</td></tr><tr><td style=\"white-space:nowrap\">HP:0004323<a name=\"hpo-HP.580004323\"> </a></td><td>Abnormality of body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000483<a name=\"hpo-HP.580000483\"> </a></td><td>Astigmatism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011003<a name=\"hpo-HP.580011003\"> </a></td><td>High myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000470<a name=\"hpo-HP.580000470\"> </a></td><td>Short neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0030044<a name=\"hpo-HP.580030044\"> </a></td><td>Flexion contracture of digit</td></tr><tr><td style=\"white-space:nowrap\">HP:0100871<a name=\"hpo-HP.580100871\"> </a></td><td>Abnormality of the palm</td></tr><tr><td style=\"white-space:nowrap\">HP:0004334<a name=\"hpo-HP.580004334\"> </a></td><td>Dermal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001845<a name=\"hpo-HP.580001845\"> </a></td><td>Overlapping toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000496<a name=\"hpo-HP.580000496\"> </a></td><td>Abnormality of eye movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0001780<a name=\"hpo-HP.580001780\"> </a></td><td>Abnormality of toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001626<a name=\"hpo-HP.580001626\"> </a></td><td>Abnormality of the cardiovascular system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002086<a name=\"hpo-HP.580002086\"> </a></td><td>Abnormality of the respiratory system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000818<a name=\"hpo-HP.580000818\"> </a></td><td>Abnormality of the endocrine system</td></tr><tr><td style=\"white-space:nowrap\">HP:0012372<a name=\"hpo-HP.580012372\"> </a></td><td>Abnormal eye morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009473<a name=\"hpo-HP.580009473\"> </a></td><td>Joint contracture of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0003199<a name=\"hpo-HP.580003199\"> </a></td><td>Decreased muscle mass</td></tr><tr><td style=\"white-space:nowrap\">HP:0003202<a name=\"hpo-HP.580003202\"> </a></td><td>Skeletal muscle atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003551<a name=\"hpo-HP.580003551\"> </a></td><td>Difficulty climbing stairs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002355<a name=\"hpo-HP.580002355\"> </a></td><td>Difficulty walking</td></tr><tr><td style=\"white-space:nowrap\">HP:0003546<a name=\"hpo-HP.580003546\"> </a></td><td>Exercise intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0003325<a name=\"hpo-HP.580003325\"> </a></td><td>Limb-girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003701<a name=\"hpo-HP.580003701\"> </a></td><td>Proximal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003547<a name=\"hpo-HP.580003547\"> </a></td><td>Shoulder girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0007340<a name=\"hpo-HP.580007340\"> </a></td><td>Lower limb muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002168<a name=\"hpo-HP.580002168\"> </a></td><td>Scanning speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0001265<a name=\"hpo-HP.580001265\"> </a></td><td>Hyporeflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001284<a name=\"hpo-HP.580001284\"> </a></td><td>Areflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003477<a name=\"hpo-HP.580003477\"> </a></td><td>Peripheral axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000924<a name=\"hpo-HP.580000924\"> </a></td><td>Abnormality of the skeletal system</td></tr><tr><td style=\"white-space:nowrap\">HP:0001291<a name=\"hpo-HP.580001291\"> </a></td><td>Abnormal cranial nerve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003687<a name=\"hpo-HP.580003687\"> </a></td><td>Centrally nucleated skeletal muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0001324<a name=\"hpo-HP.580001324\"> </a></td><td>Muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002515<a name=\"hpo-HP.580002515\"> </a></td><td>Waddling gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0100280<a name=\"hpo-HP.580100280\"> </a></td><td>Crohn's disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0002631<a name=\"hpo-HP.580002631\"> </a></td><td>obsolete Dilatation of ascending aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0100026<a name=\"hpo-HP.580100026\"> </a></td><td>Arteriovenous malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002637<a name=\"hpo-HP.580002637\"> </a></td><td>Cerebral ischemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002619<a name=\"hpo-HP.580002619\"> </a></td><td>Varicose veins</td></tr><tr><td style=\"white-space:nowrap\">HP:0001159<a name=\"hpo-HP.580001159\"> </a></td><td>Syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002069<a name=\"hpo-HP.580002069\"> </a></td><td>Bilateral tonic-clonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000977<a name=\"hpo-HP.580000977\"> </a></td><td>Soft skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010648<a name=\"hpo-HP.580010648\"> </a></td><td>Dermal translucency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000978<a name=\"hpo-HP.580000978\"> </a></td><td>Bruising susceptibility</td></tr><tr><td style=\"white-space:nowrap\">HP:0001956<a name=\"hpo-HP.580001956\"> </a></td><td>Truncal obesity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000189<a name=\"hpo-HP.580000189\"> </a></td><td>Narrow palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000678<a name=\"hpo-HP.580000678\"> </a></td><td>Dental crowding</td></tr><tr><td style=\"white-space:nowrap\">HP:0002870<a name=\"hpo-HP.580002870\"> </a></td><td>Obstructive sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001763<a name=\"hpo-HP.580001763\"> </a></td><td>Pes planus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000782<a name=\"hpo-HP.580000782\"> </a></td><td>Abnormality of the scapula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001600<a name=\"hpo-HP.580001600\"> </a></td><td>Abnormality of the larynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0002088<a name=\"hpo-HP.580002088\"> </a></td><td>Abnormal lung morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011407<a name=\"hpo-HP.580011407\"> </a></td><td>Proportionate tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0000541<a name=\"hpo-HP.580000541\"> </a></td><td>Retinal detachment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001373<a name=\"hpo-HP.580001373\"> </a></td><td>Joint dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000938<a name=\"hpo-HP.580000938\"> </a></td><td>Osteopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002942<a name=\"hpo-HP.580002942\"> </a></td><td>Thoracic kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001840<a name=\"hpo-HP.580001840\"> </a></td><td>Metatarsus adductus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001844<a name=\"hpo-HP.580001844\"> </a></td><td>Abnormality of the hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0001765<a name=\"hpo-HP.580001765\"> </a></td><td>Hammertoe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000606<a name=\"hpo-HP.580000606\"> </a></td><td>Abnormality of the periorbital region</td></tr><tr><td style=\"white-space:nowrap\">HP:0002757<a name=\"hpo-HP.580002757\"> </a></td><td>Recurrent fractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0000647<a name=\"hpo-HP.580000647\"> </a></td><td>Sclerocornea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001166<a name=\"hpo-HP.580001166\"> </a></td><td>Arachnodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005490<a name=\"hpo-HP.580005490\"> </a></td><td>Postnatal macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0011363<a name=\"hpo-HP.580011363\"> </a></td><td>Abnormality of hair growth rate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000276<a name=\"hpo-HP.580000276\"> </a></td><td>Long face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000275<a name=\"hpo-HP.580000275\"> </a></td><td>Narrow face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000337<a name=\"hpo-HP.580000337\"> </a></td><td>Broad forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0002267<a name=\"hpo-HP.580002267\"> </a></td><td>Exaggerated startle response</td></tr><tr><td style=\"white-space:nowrap\">HP:0002187<a name=\"hpo-HP.580002187\"> </a></td><td>Intellectual disability, profound</td></tr><tr><td style=\"white-space:nowrap\">HP:0000728<a name=\"hpo-HP.580000728\"> </a></td><td>Impaired ability to form peer relationships</td></tr><tr><td style=\"white-space:nowrap\">HP:0000733<a name=\"hpo-HP.580000733\"> </a></td><td>Stereotypy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000739<a name=\"hpo-HP.580000739\"> </a></td><td>Anxiety</td></tr><tr><td style=\"white-space:nowrap\">HP:0000929<a name=\"hpo-HP.580000929\"> </a></td><td>Abnormal skull morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001965<a name=\"hpo-HP.580001965\"> </a></td><td>Abnormal scalp morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100538<a name=\"hpo-HP.580100538\"> </a></td><td>Abnormality of the supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0000309<a name=\"hpo-HP.580000309\"> </a></td><td>Abnormality of the midface</td></tr><tr><td style=\"white-space:nowrap\">HP:0000277<a name=\"hpo-HP.580000277\"> </a></td><td>Abnormality of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000765<a name=\"hpo-HP.580000765\"> </a></td><td>Abnormality of the thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0100008<a name=\"hpo-HP.580100008\"> </a></td><td>Schwannoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0030038<a name=\"hpo-HP.580030038\"> </a></td><td>Enchondroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0100777<a name=\"hpo-HP.580100777\"> </a></td><td>Exostoses</td></tr><tr><td style=\"white-space:nowrap\">HP:0011663<a name=\"hpo-HP.580011663\"> </a></td><td>Right ventricular cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011675<a name=\"hpo-HP.580011675\"> </a></td><td>Arrhythmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001962<a name=\"hpo-HP.580001962\"> </a></td><td>Palpitations</td></tr><tr><td style=\"white-space:nowrap\">HP:0001279<a name=\"hpo-HP.580001279\"> </a></td><td>Syncope</td></tr><tr><td style=\"white-space:nowrap\">HP:0004756<a name=\"hpo-HP.580004756\"> </a></td><td>Ventricular tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000252<a name=\"hpo-HP.580000252\"> </a></td><td>Microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000303<a name=\"hpo-HP.580000303\"> </a></td><td>Mandibular prognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000664<a name=\"hpo-HP.580000664\"> </a></td><td>Synophrys</td></tr><tr><td style=\"white-space:nowrap\">HP:0001609<a name=\"hpo-HP.580001609\"> </a></td><td>Hoarse voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0002558<a name=\"hpo-HP.580002558\"> </a></td><td>Supernumerary nipple</td></tr><tr><td style=\"white-space:nowrap\">HP:0001634<a name=\"hpo-HP.580001634\"> </a></td><td>Mitral valve prolapse</td></tr><tr><td style=\"white-space:nowrap\">HP:0000028<a name=\"hpo-HP.580000028\"> </a></td><td>Cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000973<a name=\"hpo-HP.580000973\"> </a></td><td>Cutis laxa</td></tr><tr><td style=\"white-space:nowrap\">HP:0001518<a name=\"hpo-HP.580001518\"> </a></td><td>Small for gestational age</td></tr><tr><td style=\"white-space:nowrap\">HP:0000527<a name=\"hpo-HP.580000527\"> </a></td><td>Long eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002808<a name=\"hpo-HP.580002808\"> </a></td><td>Kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000248<a name=\"hpo-HP.580000248\"> </a></td><td>Brachycephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000505<a name=\"hpo-HP.580000505\"> </a></td><td>Visual impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000512<a name=\"hpo-HP.580000512\"> </a></td><td>Abnormal electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:0000517<a name=\"hpo-HP.580000517\"> </a></td><td>Abnormality of the lens</td></tr><tr><td style=\"white-space:nowrap\">HP:0000529<a name=\"hpo-HP.580000529\"> </a></td><td>Progressive visual loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0000586<a name=\"hpo-HP.580000586\"> </a></td><td>Shallow orbits</td></tr><tr><td style=\"white-space:nowrap\">HP:0000603<a name=\"hpo-HP.580000603\"> </a></td><td>Central scotoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000939<a name=\"hpo-HP.580000939\"> </a></td><td>Osteoporosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001377<a name=\"hpo-HP.580001377\"> </a></td><td>Limited elbow extension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001387<a name=\"hpo-HP.580001387\"> </a></td><td>Joint stiffness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001822<a name=\"hpo-HP.580001822\"> </a></td><td>Hallux valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0002657<a name=\"hpo-HP.580002657\"> </a></td><td>Spondylometaphyseal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003026<a name=\"hpo-HP.580003026\"> </a></td><td>Short long bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0006462<a name=\"hpo-HP.580006462\"> </a></td><td>Generalized bone demineralization</td></tr><tr><td style=\"white-space:nowrap\">HP:0008873<a name=\"hpo-HP.580008873\"> </a></td><td>Disproportionate short-limb short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0008905<a name=\"hpo-HP.580008905\"> </a></td><td>Rhizomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008922<a name=\"hpo-HP.580008922\"> </a></td><td>Childhood-onset short-trunk short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0200020<a name=\"hpo-HP.580200020\"> </a></td><td>Corneal erosion</td></tr><tr><td style=\"white-space:nowrap\">HP:0001172<a name=\"hpo-HP.580001172\"> </a></td><td>Abnormal thumb morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002286<a name=\"hpo-HP.580002286\"> </a></td><td>Fair hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0010719<a name=\"hpo-HP.580010719\"> </a></td><td>Abnormality of hair texture</td></tr><tr><td style=\"white-space:nowrap\">HP:0010720<a name=\"hpo-HP.580010720\"> </a></td><td>Abnormal hair pattern</td></tr><tr><td style=\"white-space:nowrap\">HP:0001635<a name=\"hpo-HP.580001635\"> </a></td><td>Congestive heart failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001644<a name=\"hpo-HP.580001644\"> </a></td><td>Dilated cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001663<a name=\"hpo-HP.580001663\"> </a></td><td>Ventricular fibrillation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011712<a name=\"hpo-HP.580011712\"> </a></td><td>Right bundle branch block</td></tr><tr><td style=\"white-space:nowrap\">HP:0000272<a name=\"hpo-HP.580000272\"> </a></td><td>Malar flattening</td></tr><tr><td style=\"white-space:nowrap\">HP:0000286<a name=\"hpo-HP.580000286\"> </a></td><td>Epicanthus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000322<a name=\"hpo-HP.580000322\"> </a></td><td>Short philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000463<a name=\"hpo-HP.580000463\"> </a></td><td>Anteverted nares</td></tr><tr><td style=\"white-space:nowrap\">HP:0000494<a name=\"hpo-HP.580000494\"> </a></td><td>Downslanted palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0000543<a name=\"hpo-HP.580000543\"> </a></td><td>Optic disc pallor</td></tr><tr><td style=\"white-space:nowrap\">HP:0000699<a name=\"hpo-HP.580000699\"> </a></td><td>Diastema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000773<a name=\"hpo-HP.580000773\"> </a></td><td>Short ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000887<a name=\"hpo-HP.580000887\"> </a></td><td>Cupped ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000946<a name=\"hpo-HP.580000946\"> </a></td><td>Hypoplastic ilia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000954<a name=\"hpo-HP.580000954\"> </a></td><td>Single transverse palmar crease</td></tr><tr><td style=\"white-space:nowrap\">HP:0001182<a name=\"hpo-HP.580001182\"> </a></td><td>Tapered finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0001537<a name=\"hpo-HP.580001537\"> </a></td><td>Umbilical hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002007<a name=\"hpo-HP.580002007\"> </a></td><td>Frontal bossing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002980<a name=\"hpo-HP.580002980\"> </a></td><td>Femoral bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002982<a name=\"hpo-HP.580002982\"> </a></td><td>Tibial bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003021<a name=\"hpo-HP.580003021\"> </a></td><td>Metaphyseal cupping</td></tr><tr><td style=\"white-space:nowrap\">HP:0005011<a name=\"hpo-HP.580005011\"> </a></td><td>Mesomelic arm shortening</td></tr><tr><td style=\"white-space:nowrap\">HP:0008803<a name=\"hpo-HP.580008803\"> </a></td><td>obsolete Narrow sacroiliac notch</td></tr><tr><td style=\"white-space:nowrap\">HP:0009117<a name=\"hpo-HP.580009117\"> </a></td><td>Aplasia/Hypoplasia of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0011220<a name=\"hpo-HP.580011220\"> </a></td><td>Prominent forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0012801<a name=\"hpo-HP.580012801\"> </a></td><td>Narrow jaw</td></tr><tr><td style=\"white-space:nowrap\">HP:0000243<a name=\"hpo-HP.580000243\"> </a></td><td>Trigonocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000358<a name=\"hpo-HP.580000358\"> </a></td><td>Posteriorly rotated ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0000411<a name=\"hpo-HP.580000411\"> </a></td><td>Protruding ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000646<a name=\"hpo-HP.580000646\"> </a></td><td>Amblyopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002812<a name=\"hpo-HP.580002812\"> </a></td><td>Coxa vara</td></tr><tr><td style=\"white-space:nowrap\">HP:0002970<a name=\"hpo-HP.580002970\"> </a></td><td>Genu varum</td></tr><tr><td style=\"white-space:nowrap\">HP:0012775<a name=\"hpo-HP.580012775\"> </a></td><td>Stellate iris</td></tr><tr><td style=\"white-space:nowrap\">HP:0000278<a name=\"hpo-HP.580000278\"> </a></td><td>Retrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0009796<a name=\"hpo-HP.580009796\"> </a></td><td>Branchial cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0002474<a name=\"hpo-HP.580002474\"> </a></td><td>Expressive language delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0007018<a name=\"hpo-HP.580007018\"> </a></td><td>Attention deficit hyperactivity disorder</td></tr><tr><td style=\"white-space:nowrap\">HP:0003198<a name=\"hpo-HP.580003198\"> </a></td><td>Myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003324<a name=\"hpo-HP.580003324\"> </a></td><td>Generalized muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003552<a name=\"hpo-HP.580003552\"> </a></td><td>Muscle stiffness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003554<a name=\"hpo-HP.580003554\"> </a></td><td>Type 2 muscle fiber atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003557<a name=\"hpo-HP.580003557\"> </a></td><td>Increased variability in muscle fiber diameter</td></tr><tr><td style=\"white-space:nowrap\">HP:0009025<a name=\"hpo-HP.580009025\"> </a></td><td>Increased connective tissue</td></tr><tr><td style=\"white-space:nowrap\">HP:0003635<a name=\"hpo-HP.580003635\"> </a></td><td>Loss of subcutaneous adipose tissue in limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002597<a name=\"hpo-HP.580002597\"> </a></td><td>Abnormality of the vasculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0001649<a name=\"hpo-HP.580001649\"> </a></td><td>Tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001638<a name=\"hpo-HP.580001638\"> </a></td><td>Cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001654<a name=\"hpo-HP.580001654\"> </a></td><td>Abnormal heart valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001671<a name=\"hpo-HP.580001671\"> </a></td><td>Abnormal cardiac septum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000103<a name=\"hpo-HP.580000103\"> </a></td><td>Polyuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0000114<a name=\"hpo-HP.580000114\"> </a></td><td>Proximal tubulopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001878<a name=\"hpo-HP.580001878\"> </a></td><td>Hemolytic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001931<a name=\"hpo-HP.580001931\"> </a></td><td>Hypochromic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001935<a name=\"hpo-HP.580001935\"> </a></td><td>Microcytic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001959<a name=\"hpo-HP.580001959\"> </a></td><td>Polydipsia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001994<a name=\"hpo-HP.580001994\"> </a></td><td>Renal Fanconi syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002134<a name=\"hpo-HP.580002134\"> </a></td><td>Abnormality of the basal ganglia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002188<a name=\"hpo-HP.580002188\"> </a></td><td>Delayed CNS myelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0002908<a name=\"hpo-HP.580002908\"> </a></td><td>Conjugated hyperbilirubinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003774<a name=\"hpo-HP.580003774\"> </a></td><td>Stage 5 chronic kidney disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0010700<a name=\"hpo-HP.580010700\"> </a></td><td>obsolete Total cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000193<a name=\"hpo-HP.580000193\"> </a></td><td>Bifid uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000219<a name=\"hpo-HP.580000219\"> </a></td><td>Thin upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000426<a name=\"hpo-HP.580000426\"> </a></td><td>Prominent nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000452<a name=\"hpo-HP.580000452\"> </a></td><td>Choanal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000490<a name=\"hpo-HP.580000490\"> </a></td><td>Deeply set eye</td></tr><tr><td style=\"white-space:nowrap\">HP:0000540<a name=\"hpo-HP.580000540\"> </a></td><td>Hypermetropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000579<a name=\"hpo-HP.580000579\"> </a></td><td>Nasolacrimal duct obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0000684<a name=\"hpo-HP.580000684\"> </a></td><td>Delayed eruption of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000960<a name=\"hpo-HP.580000960\"> </a></td><td>Sacral dimple</td></tr><tr><td style=\"white-space:nowrap\">HP:0000998<a name=\"hpo-HP.580000998\"> </a></td><td>Hypertrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001643<a name=\"hpo-HP.580001643\"> </a></td><td>Patent ductus arteriosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010813<a name=\"hpo-HP.580010813\"> </a></td><td>Abnormal number of hair whorls</td></tr><tr><td style=\"white-space:nowrap\">HP:0012384<a name=\"hpo-HP.580012384\"> </a></td><td>Rhinitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012745<a name=\"hpo-HP.580012745\"> </a></td><td>Short palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000359<a name=\"hpo-HP.580000359\"> </a></td><td>Abnormality of the inner ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000429<a name=\"hpo-HP.580000429\"> </a></td><td>Abnormality of the nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000436<a name=\"hpo-HP.580000436\"> </a></td><td>Abnormality of the nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000499<a name=\"hpo-HP.580000499\"> </a></td><td>Abnormal eyelash morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000534<a name=\"hpo-HP.580000534\"> </a></td><td>Abnormal eyebrow morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000951<a name=\"hpo-HP.580000951\"> </a></td><td>Abnormality of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001000<a name=\"hpo-HP.580001000\"> </a></td><td>Abnormality of skin pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001597<a name=\"hpo-HP.580001597\"> </a></td><td>Abnormality of the nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0006483<a name=\"hpo-HP.580006483\"> </a></td><td>Abnormal number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009929<a name=\"hpo-HP.580009929\"> </a></td><td>Abnormality of the columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0011119<a name=\"hpo-HP.580011119\"> </a></td><td>Abnormality of the nasal dorsum</td></tr><tr><td style=\"white-space:nowrap\">HP:0012808<a name=\"hpo-HP.580012808\"> </a></td><td>Abnormal nasal base</td></tr><tr><td style=\"white-space:nowrap\">HP:0100490<a name=\"hpo-HP.580100490\"> </a></td><td>Camptodactyly of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0000964<a name=\"hpo-HP.580000964\"> </a></td><td>Eczema</td></tr><tr><td style=\"white-space:nowrap\">HP:0004442<a name=\"hpo-HP.580004442\"> </a></td><td>Sagittal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000414<a name=\"hpo-HP.580000414\"> </a></td><td>Bulbous nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0003180<a name=\"hpo-HP.580003180\"> </a></td><td>Flat acetabular roof</td></tr><tr><td style=\"white-space:nowrap\">HP:0000422<a name=\"hpo-HP.580000422\"> </a></td><td>Abnormality of the nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000614<a name=\"hpo-HP.580000614\"> </a></td><td>Abnormal nasolacrimal system morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001167<a name=\"hpo-HP.580001167\"> </a></td><td>Abnormality of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0001595<a name=\"hpo-HP.580001595\"> </a></td><td>Abnormal hair morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012373<a name=\"hpo-HP.580012373\"> </a></td><td>Abnormal eye physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001655<a name=\"hpo-HP.580001655\"> </a></td><td>Patent foramen ovale</td></tr><tr><td style=\"white-space:nowrap\">HP:0001647<a name=\"hpo-HP.580001647\"> </a></td><td>Bicuspid aortic valve</td></tr><tr><td style=\"white-space:nowrap\">HP:0000574<a name=\"hpo-HP.580000574\"> </a></td><td>Thick eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0001169<a name=\"hpo-HP.580001169\"> </a></td><td>Broad palm</td></tr><tr><td style=\"white-space:nowrap\">HP:0006471<a name=\"hpo-HP.580006471\"> </a></td><td>Fixed elbow flexion</td></tr><tr><td style=\"white-space:nowrap\">HP:0008689<a name=\"hpo-HP.580008689\"> </a></td><td>Bilateral cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011304<a name=\"hpo-HP.580011304\"> </a></td><td>Broad thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0005110<a name=\"hpo-HP.580005110\"> </a></td><td>Atrial fibrillation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001633<a name=\"hpo-HP.580001633\"> </a></td><td>Abnormal mitral valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001641<a name=\"hpo-HP.580001641\"> </a></td><td>Abnormal pulmonary valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001702<a name=\"hpo-HP.580001702\"> </a></td><td>Abnormal tricuspid valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000012<a name=\"hpo-HP.580000012\"> </a></td><td>Urinary urgency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000020<a name=\"hpo-HP.580000020\"> </a></td><td>Urinary incontinence</td></tr><tr><td style=\"white-space:nowrap\">HP:0000131<a name=\"hpo-HP.580000131\"> </a></td><td>Uterine leiomyoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000132<a name=\"hpo-HP.580000132\"> </a></td><td>Menorrhagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000138<a name=\"hpo-HP.580000138\"> </a></td><td>Ovarian cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0000853<a name=\"hpo-HP.580000853\"> </a></td><td>Goiter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000953<a name=\"hpo-HP.580000953\"> </a></td><td>Hyperpigmentation of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001061<a name=\"hpo-HP.580001061\"> </a></td><td>Acne</td></tr><tr><td style=\"white-space:nowrap\">HP:0002315<a name=\"hpo-HP.580002315\"> </a></td><td>Headache</td></tr><tr><td style=\"white-space:nowrap\">HP:0004324<a name=\"hpo-HP.580004324\"> </a></td><td>Increased body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000069<a name=\"hpo-HP.580000069\"> </a></td><td>Abnormality of the ureter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000077<a name=\"hpo-HP.580000077\"> </a></td><td>Abnormality of the kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0000759<a name=\"hpo-HP.580000759\"> </a></td><td>Abnormal peripheral nervous system morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008069<a name=\"hpo-HP.580008069\"> </a></td><td>Neoplasm of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011276<a name=\"hpo-HP.580011276\"> </a></td><td>Vascular skin abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000705<a name=\"hpo-HP.580000705\"> </a></td><td>Amelogenesis imperfecta</td></tr><tr><td style=\"white-space:nowrap\">HP:0001256<a name=\"hpo-HP.580001256\"> </a></td><td>Intellectual disability, mild</td></tr><tr><td style=\"white-space:nowrap\">HP:0000325<a name=\"hpo-HP.580000325\"> </a></td><td>Triangular face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000160<a name=\"hpo-HP.580000160\"> </a></td><td>Narrow mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009487<a name=\"hpo-HP.580009487\"> </a></td><td>Ulnar deviation of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0001249<a name=\"hpo-HP.580001249\"> </a></td><td>Intellectual disability</td></tr><tr><td style=\"white-space:nowrap\">HP:0008064<a name=\"hpo-HP.580008064\"> </a></td><td>Ichthyosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000311<a name=\"hpo-HP.580000311\"> </a></td><td>Round face</td></tr><tr><td style=\"white-space:nowrap\">HP:0001653<a name=\"hpo-HP.580001653\"> </a></td><td>Mitral regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001771<a name=\"hpo-HP.580001771\"> </a></td><td>Achilles tendon contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0012032<a name=\"hpo-HP.580012032\"> </a></td><td>Lipoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0012368<a name=\"hpo-HP.580012368\"> </a></td><td>Flat face</td></tr><tr><td style=\"white-space:nowrap\">HP:0030053<a name=\"hpo-HP.580030053\"> </a></td><td>Stiff skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011124<a name=\"hpo-HP.580011124\"> </a></td><td>Abnormality of epidermal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011097<a name=\"hpo-HP.580011097\"> </a></td><td>Epileptic spasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000407<a name=\"hpo-HP.580000407\"> </a></td><td>Sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000331<a name=\"hpo-HP.580000331\"> </a></td><td>Short chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000340<a name=\"hpo-HP.580000340\"> </a></td><td>Sloping forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0000486<a name=\"hpo-HP.580000486\"> </a></td><td>Strabismus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000713<a name=\"hpo-HP.580000713\"> </a></td><td>Agitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000802<a name=\"hpo-HP.580000802\"> </a></td><td>Impotence</td></tr><tr><td style=\"white-space:nowrap\">HP:0001272<a name=\"hpo-HP.580001272\"> </a></td><td>Cerebellar atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001276<a name=\"hpo-HP.580001276\"> </a></td><td>Hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001321<a name=\"hpo-HP.580001321\"> </a></td><td>Cerebellar hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001322<a name=\"hpo-HP.580001322\"> </a></td><td>obsolete Brain very small</td></tr><tr><td style=\"white-space:nowrap\">HP:0002061<a name=\"hpo-HP.580002061\"> </a></td><td>Lower limb spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002529<a name=\"hpo-HP.580002529\"> </a></td><td>Neuronal loss in central nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002540<a name=\"hpo-HP.580002540\"> </a></td><td>Inability to walk</td></tr><tr><td style=\"white-space:nowrap\">HP:0005484<a name=\"hpo-HP.580005484\"> </a></td><td>Postnatal microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0012850<a name=\"hpo-HP.580012850\"> </a></td><td>Small intestinal dysmotility</td></tr><tr><td style=\"white-space:nowrap\">HP:0000504<a name=\"hpo-HP.580000504\"> </a></td><td>Abnormality of vision</td></tr><tr><td style=\"white-space:nowrap\">HP:0002118<a name=\"hpo-HP.580002118\"> </a></td><td>Abnormality of the cerebral ventricles</td></tr><tr><td style=\"white-space:nowrap\">HP:0002363<a name=\"hpo-HP.580002363\"> </a></td><td>Abnormality of brainstem morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0010651<a name=\"hpo-HP.580010651\"> </a></td><td>Abnormal meningeal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100024<a name=\"hpo-HP.580100024\"> </a></td><td>Conspicuously happy disposition</td></tr><tr><td style=\"white-space:nowrap\">HP:0002538<a name=\"hpo-HP.580002538\"> </a></td><td>Abnormality of the cerebral cortex</td></tr><tr><td style=\"white-space:nowrap\">HP:0000054<a name=\"hpo-HP.580000054\"> </a></td><td>Micropenis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000215<a name=\"hpo-HP.580000215\"> </a></td><td>Thick upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000293<a name=\"hpo-HP.580000293\"> </a></td><td>Full cheeks</td></tr><tr><td style=\"white-space:nowrap\">HP:0000349<a name=\"hpo-HP.580000349\"> </a></td><td>Widow's peak</td></tr><tr><td style=\"white-space:nowrap\">HP:0000444<a name=\"hpo-HP.580000444\"> </a></td><td>Convex nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000506<a name=\"hpo-HP.580000506\"> </a></td><td>Telecanthus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000592<a name=\"hpo-HP.580000592\"> </a></td><td>Blue sclerae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000691<a name=\"hpo-HP.580000691\"> </a></td><td>Microdontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000698<a name=\"hpo-HP.580000698\"> </a></td><td>Conical tooth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002000<a name=\"hpo-HP.580002000\"> </a></td><td>Short columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0002097<a name=\"hpo-HP.580002097\"> </a></td><td>Emphysema</td></tr><tr><td style=\"white-space:nowrap\">HP:0002209<a name=\"hpo-HP.580002209\"> </a></td><td>Sparse scalp hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002816<a name=\"hpo-HP.580002816\"> </a></td><td>Genu recurvatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0005116<a name=\"hpo-HP.580005116\"> </a></td><td>Arterial tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0007957<a name=\"hpo-HP.580007957\"> </a></td><td>Corneal opacity</td></tr><tr><td style=\"white-space:nowrap\">HP:0008070<a name=\"hpo-HP.580008070\"> </a></td><td>Sparse hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0009623<a name=\"hpo-HP.580009623\"> </a></td><td>Proximal placement of thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0010055<a name=\"hpo-HP.580010055\"> </a></td><td>Broad hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0011318<a name=\"hpo-HP.580011318\"> </a></td><td>Bicoronal synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011968<a name=\"hpo-HP.580011968\"> </a></td><td>Feeding difficulties</td></tr><tr><td style=\"white-space:nowrap\">HP:0200067<a name=\"hpo-HP.580200067\"> </a></td><td>Recurrent spontaneous abortion</td></tr><tr><td style=\"white-space:nowrap\">HP:0011819<a name=\"hpo-HP.580011819\"> </a></td><td>Submucous cleft soft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000268<a name=\"hpo-HP.580000268\"> </a></td><td>Dolichocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0003302<a name=\"hpo-HP.580003302\"> </a></td><td>Spondylolisthesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000582<a name=\"hpo-HP.580000582\"> </a></td><td>Upslanted palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000952<a name=\"hpo-HP.580000952\"> </a></td><td>Jaundice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001298<a name=\"hpo-HP.580001298\"> </a></td><td>Encephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001396<a name=\"hpo-HP.580001396\"> </a></td><td>Cholestasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002059<a name=\"hpo-HP.580002059\"> </a></td><td>Cerebral atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002171<a name=\"hpo-HP.580002171\"> </a></td><td>Gliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002240<a name=\"hpo-HP.580002240\"> </a></td><td>Hepatomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002353<a name=\"hpo-HP.580002353\"> </a></td><td>EEG abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0002446<a name=\"hpo-HP.580002446\"> </a></td><td>Astrocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003287<a name=\"hpo-HP.580003287\"> </a></td><td>Abnormality of mitochondrial metabolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011449<a name=\"hpo-HP.580011449\"> </a></td><td>Knee clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012852<a name=\"hpo-HP.580012852\"> </a></td><td>Hepatic bridging fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100626<a name=\"hpo-HP.580100626\"> </a></td><td>Chronic hepatic failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000385<a name=\"hpo-HP.580000385\"> </a></td><td>Small earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0009748<a name=\"hpo-HP.580009748\"> </a></td><td>Large earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000157<a name=\"hpo-HP.580000157\"> </a></td><td>Abnormality of the tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0000172<a name=\"hpo-HP.580000172\"> </a></td><td>Abnormality of the uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000174<a name=\"hpo-HP.580000174\"> </a></td><td>Abnormal palate morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000306<a name=\"hpo-HP.580000306\"> </a></td><td>Abnormality of the chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0004408<a name=\"hpo-HP.580004408\"> </a></td><td>Abnormality of the sense of smell</td></tr><tr><td style=\"white-space:nowrap\">HP:0009912<a name=\"hpo-HP.580009912\"> </a></td><td>Abnormality of the tragus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000537<a name=\"hpo-HP.580000537\"> </a></td><td>Epicanthus inversus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000565<a name=\"hpo-HP.580000565\"> </a></td><td>Esotropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000752<a name=\"hpo-HP.580000752\"> </a></td><td>Hyperactivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003186<a name=\"hpo-HP.580003186\"> </a></td><td>Inverted nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0012503<a name=\"hpo-HP.580012503\"> </a></td><td>Abnormality of the pituitary gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0100710<a name=\"hpo-HP.580100710\"> </a></td><td>Impulsivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000357<a name=\"hpo-HP.580000357\"> </a></td><td>Abnormal location of ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0000820<a name=\"hpo-HP.580000820\"> </a></td><td>Abnormality of the thyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000828<a name=\"hpo-HP.580000828\"> </a></td><td>Abnormality of the parathyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000834<a name=\"hpo-HP.580000834\"> </a></td><td>Abnormality of the adrenal glands</td></tr><tr><td style=\"white-space:nowrap\">HP:0012093<a name=\"hpo-HP.580012093\"> </a></td><td>Abnormality of endocrine pancreas physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000269<a name=\"hpo-HP.580000269\"> </a></td><td>Prominent occiput</td></tr><tr><td style=\"white-space:nowrap\">HP:0000535<a name=\"hpo-HP.580000535\"> </a></td><td>Sparse and thin eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000639<a name=\"hpo-HP.580000639\"> </a></td><td>Nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000718<a name=\"hpo-HP.580000718\"> </a></td><td>Aggressive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000957<a name=\"hpo-HP.580000957\"> </a></td><td>Cafe-au-lait spot</td></tr><tr><td style=\"white-space:nowrap\">HP:0000256<a name=\"hpo-HP.580000256\"> </a></td><td>Macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000750<a name=\"hpo-HP.580000750\"> </a></td><td>Delayed speech and language development</td></tr><tr><td style=\"white-space:nowrap\">HP:0000963<a name=\"hpo-HP.580000963\"> </a></td><td>Thin skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001260<a name=\"hpo-HP.580001260\"> </a></td><td>Dysarthria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002194<a name=\"hpo-HP.580002194\"> </a></td><td>Delayed gross motor development</td></tr><tr><td style=\"white-space:nowrap\">HP:0003196<a name=\"hpo-HP.580003196\"> </a></td><td>Short nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0001155<a name=\"hpo-HP.580001155\"> </a></td><td>Abnormality of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0100022<a name=\"hpo-HP.580100022\"> </a></td><td>Abnormality of movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010862<a name=\"hpo-HP.580010862\"> </a></td><td>Delayed fine motor development</td></tr><tr><td style=\"white-space:nowrap\">HP:0000343<a name=\"hpo-HP.580000343\"> </a></td><td>Long philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000717<a name=\"hpo-HP.580000717\"> </a></td><td>Autism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001883<a name=\"hpo-HP.580001883\"> </a></td><td>Talipes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002553<a name=\"hpo-HP.580002553\"> </a></td><td>Highly arched eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0007488<a name=\"hpo-HP.580007488\"> </a></td><td>Diffuse skin atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000822<a name=\"hpo-HP.580000822\"> </a></td><td>Hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001278<a name=\"hpo-HP.580001278\"> </a></td><td>Orthostatic hypotension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001944<a name=\"hpo-HP.580001944\"> </a></td><td>Dehydration</td></tr><tr><td style=\"white-space:nowrap\">HP:0001945<a name=\"hpo-HP.580001945\"> </a></td><td>Fever</td></tr><tr><td style=\"white-space:nowrap\">HP:0002019<a name=\"hpo-HP.580002019\"> </a></td><td>Constipation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002020<a name=\"hpo-HP.580002020\"> </a></td><td>Gastroesophageal reflux</td></tr><tr><td style=\"white-space:nowrap\">HP:0002027<a name=\"hpo-HP.580002027\"> </a></td><td>Abdominal pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0002718<a name=\"hpo-HP.580002718\"> </a></td><td>Recurrent bacterial infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0002841<a name=\"hpo-HP.580002841\"> </a></td><td>Recurrent fungal infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0004395<a name=\"hpo-HP.580004395\"> </a></td><td>Malnutrition</td></tr><tr><td style=\"white-space:nowrap\">HP:0009830<a name=\"hpo-HP.580009830\"> </a></td><td>Peripheral neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000126<a name=\"hpo-HP.580000126\"> </a></td><td>Hydronephrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000519<a name=\"hpo-HP.580000519\"> </a></td><td>Developmental cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000648<a name=\"hpo-HP.580000648\"> </a></td><td>Optic atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001053<a name=\"hpo-HP.580001053\"> </a></td><td>Hypopigmented skin patches</td></tr><tr><td style=\"white-space:nowrap\">HP:0001087<a name=\"hpo-HP.580001087\"> </a></td><td>Developmental glaucoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0002119<a name=\"hpo-HP.580002119\"> </a></td><td>Ventriculomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002280<a name=\"hpo-HP.580002280\"> </a></td><td>Enlarged cisterna magna</td></tr><tr><td style=\"white-space:nowrap\">HP:0003298<a name=\"hpo-HP.580003298\"> </a></td><td>Spina bifida occulta</td></tr><tr><td style=\"white-space:nowrap\">HP:0004467<a name=\"hpo-HP.580004467\"> </a></td><td>Preauricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0008511<a name=\"hpo-HP.580008511\"> </a></td><td>Central posterior corneal opacity</td></tr><tr><td style=\"white-space:nowrap\">HP:0010780<a name=\"hpo-HP.580010780\"> </a></td><td>Hyperacusis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030048<a name=\"hpo-HP.580030048\"> </a></td><td>Colpocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0100335<a name=\"hpo-HP.580100335\"> </a></td><td>Non-midline cleft lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000525<a name=\"hpo-HP.580000525\"> </a></td><td>Abnormality iris morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002719<a name=\"hpo-HP.580002719\"> </a></td><td>Recurrent infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0000153<a name=\"hpo-HP.580000153\"> </a></td><td>Abnormality of the mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001903<a name=\"hpo-HP.580001903\"> </a></td><td>Anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002094<a name=\"hpo-HP.580002094\"> </a></td><td>Dyspnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002206<a name=\"hpo-HP.580002206\"> </a></td><td>Pulmonary fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002789<a name=\"hpo-HP.580002789\"> </a></td><td>Tachypnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002793<a name=\"hpo-HP.580002793\"> </a></td><td>Abnormal pattern of respiration</td></tr><tr><td style=\"white-space:nowrap\">HP:0003565<a name=\"hpo-HP.580003565\"> </a></td><td>Elevated erythrocyte sedimentation rate</td></tr><tr><td style=\"white-space:nowrap\">HP:0006517<a name=\"hpo-HP.580006517\"> </a></td><td>Intraalveolar phospholipid accumulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0006530<a name=\"hpo-HP.580006530\"> </a></td><td>Interstitial pulmonary abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0100759<a name=\"hpo-HP.580100759\"> </a></td><td>Clubbing of fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0002103<a name=\"hpo-HP.580002103\"> </a></td><td>Abnormal pleura morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001596<a name=\"hpo-HP.580001596\"> </a></td><td>Alopecia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001882<a name=\"hpo-HP.580001882\"> </a></td><td>Leukopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002013<a name=\"hpo-HP.580002013\"> </a></td><td>Vomiting</td></tr><tr><td style=\"white-space:nowrap\">HP:0002028<a name=\"hpo-HP.580002028\"> </a></td><td>Chronic diarrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002573<a name=\"hpo-HP.580002573\"> </a></td><td>Hematochezia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002960<a name=\"hpo-HP.580002960\"> </a></td><td>Autoimmunity</td></tr><tr><td style=\"white-space:nowrap\">HP:0005387<a name=\"hpo-HP.580005387\"> </a></td><td>Combined immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0011109<a name=\"hpo-HP.580011109\"> </a></td><td>Chronic sinusitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004429<a name=\"hpo-HP.580004429\"> </a></td><td>Recurrent viral infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0000280<a name=\"hpo-HP.580000280\"> </a></td><td>Coarse facial features</td></tr><tr><td style=\"white-space:nowrap\">HP:0000294<a name=\"hpo-HP.580000294\"> </a></td><td>Low anterior hairline</td></tr><tr><td style=\"white-space:nowrap\">HP:0000577<a name=\"hpo-HP.580000577\"> </a></td><td>Exotropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001873<a name=\"hpo-HP.580001873\"> </a></td><td>Thrombocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002011<a name=\"hpo-HP.580002011\"> </a></td><td>Morphological central nervous system abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0006610<a name=\"hpo-HP.580006610\"> </a></td><td>Wide intermamillary distance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011231<a name=\"hpo-HP.580011231\"> </a></td><td>Prominent eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0012718<a name=\"hpo-HP.580012718\"> </a></td><td>Morphological abnormality of the gastrointestinal tract</td></tr><tr><td style=\"white-space:nowrap\">HP:0002024<a name=\"hpo-HP.580002024\"> </a></td><td>Malabsorption</td></tr><tr><td style=\"white-space:nowrap\">HP:0001394<a name=\"hpo-HP.580001394\"> </a></td><td>Cirrhosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001414<a name=\"hpo-HP.580001414\"> </a></td><td>Microvesicular hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001403<a name=\"hpo-HP.580001403\"> </a></td><td>Macrovesicular hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001410<a name=\"hpo-HP.580001410\"> </a></td><td>Decreased liver function</td></tr><tr><td style=\"white-space:nowrap\">HP:0001409<a name=\"hpo-HP.580001409\"> </a></td><td>Portal hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001744<a name=\"hpo-HP.580001744\"> </a></td><td>Splenomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0003394<a name=\"hpo-HP.580003394\"> </a></td><td>Muscle spasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003750<a name=\"hpo-HP.580003750\"> </a></td><td>Increased muscle fatiguability</td></tr><tr><td style=\"white-space:nowrap\">HP:0002123<a name=\"hpo-HP.580002123\"> </a></td><td>Generalized myoclonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0002219<a name=\"hpo-HP.580002219\"> </a></td><td>Facial hypertrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000831<a name=\"hpo-HP.580000831\"> </a></td><td>Insulin-resistant diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001891<a name=\"hpo-HP.580001891\"> </a></td><td>Iron deficiency anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001264<a name=\"hpo-HP.580001264\"> </a></td><td>Spastic diplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002313<a name=\"hpo-HP.580002313\"> </a></td><td>Spastic paraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001347<a name=\"hpo-HP.580001347\"> </a></td><td>Hyperreflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002460<a name=\"hpo-HP.580002460\"> </a></td><td>Distal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000763<a name=\"hpo-HP.580000763\"> </a></td><td>Sensory neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001268<a name=\"hpo-HP.580001268\"> </a></td><td>Mental deterioration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002169<a name=\"hpo-HP.580002169\"> </a></td><td>Clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001332<a name=\"hpo-HP.580001332\"> </a></td><td>Dystonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100716<a name=\"hpo-HP.580100716\"> </a></td><td>Self-injurious behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000602<a name=\"hpo-HP.580000602\"> </a></td><td>Ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001251<a name=\"hpo-HP.580001251\"> </a></td><td>Ataxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000776<a name=\"hpo-HP.580000776\"> </a></td><td>Congenital diaphragmatic hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000410<a name=\"hpo-HP.580000410\"> </a></td><td>Mixed hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000510<a name=\"hpo-HP.580000510\"> </a></td><td>Rod-cone dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0004437<a name=\"hpo-HP.580004437\"> </a></td><td>Cranial hyperostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011001<a name=\"hpo-HP.580011001\"> </a></td><td>Increased bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0000956<a name=\"hpo-HP.580000956\"> </a></td><td>Acanthosis nigricans</td></tr><tr><td style=\"white-space:nowrap\">HP:0000958<a name=\"hpo-HP.580000958\"> </a></td><td>Dry skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000580<a name=\"hpo-HP.580000580\"> </a></td><td>Pigmentary retinopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000649<a name=\"hpo-HP.580000649\"> </a></td><td>Abnormality of visual evoked potentials</td></tr><tr><td style=\"white-space:nowrap\">HP:0000657<a name=\"hpo-HP.580000657\"> </a></td><td>Oculomotor apraxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000479<a name=\"hpo-HP.580000479\"> </a></td><td>Abnormal retinal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001317<a name=\"hpo-HP.580001317\"> </a></td><td>Abnormal cerebellum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001533<a name=\"hpo-HP.580001533\"> </a></td><td>Slender build</td></tr><tr><td style=\"white-space:nowrap\">HP:0001629<a name=\"hpo-HP.580001629\"> </a></td><td>Ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0000703<a name=\"hpo-HP.580000703\"> </a></td><td>Dentinogenesis imperfecta</td></tr><tr><td style=\"white-space:nowrap\">HP:0000914<a name=\"hpo-HP.580000914\"> </a></td><td>Shield chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0001500<a name=\"hpo-HP.580001500\"> </a></td><td>Broad finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0003086<a name=\"hpo-HP.580003086\"> </a></td><td>Acromesomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003416<a name=\"hpo-HP.580003416\"> </a></td><td>Spinal canal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002815<a name=\"hpo-HP.580002815\"> </a></td><td>Abnormality of the knee</td></tr><tr><td style=\"white-space:nowrap\">HP:0002992<a name=\"hpo-HP.580002992\"> </a></td><td>Abnormality of tibia morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001639<a name=\"hpo-HP.580001639\"> </a></td><td>Hypertrophic cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003236<a name=\"hpo-HP.580003236\"> </a></td><td>Elevated serum creatine kinase</td></tr><tr><td style=\"white-space:nowrap\">HP:0001369<a name=\"hpo-HP.580001369\"> </a></td><td>Arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003560<a name=\"hpo-HP.580003560\"> </a></td><td>Muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003974<a name=\"hpo-HP.580003974\"> </a></td><td>Absent radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0002818<a name=\"hpo-HP.580002818\"> </a></td><td>Abnormality of the radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0001561<a name=\"hpo-HP.580001561\"> </a></td><td>Polyhydramnios</td></tr><tr><td style=\"white-space:nowrap\">HP:0002299<a name=\"hpo-HP.580002299\"> </a></td><td>Brittle hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002208<a name=\"hpo-HP.580002208\"> </a></td><td>Coarse hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002213<a name=\"hpo-HP.580002213\"> </a></td><td>Fine hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000522<a name=\"hpo-HP.580000522\"> </a></td><td>Alacrima</td></tr><tr><td style=\"white-space:nowrap\">HP:0100704<a name=\"hpo-HP.580100704\"> </a></td><td>Cerebral visual impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0012713<a name=\"hpo-HP.580012713\"> </a></td><td>Moderate hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002307<a name=\"hpo-HP.580002307\"> </a></td><td>Drooling</td></tr><tr><td style=\"white-space:nowrap\">HP:0002714<a name=\"hpo-HP.580002714\"> </a></td><td>Downturned corners of mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000191<a name=\"hpo-HP.580000191\"> </a></td><td>Accessory oral frenulum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000158<a name=\"hpo-HP.580000158\"> </a></td><td>Macroglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012020<a name=\"hpo-HP.580012020\"> </a></td><td>Right aortic arch</td></tr><tr><td style=\"white-space:nowrap\">HP:0002104<a name=\"hpo-HP.580002104\"> </a></td><td>Apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0000598<a name=\"hpo-HP.580000598\"> </a></td><td>Abnormality of the ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0007874<a name=\"hpo-HP.580007874\"> </a></td><td>Almond-shaped palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0010804<a name=\"hpo-HP.580010804\"> </a></td><td>Tented upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000885<a name=\"hpo-HP.580000885\"> </a></td><td>Broad ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000768<a name=\"hpo-HP.580000768\"> </a></td><td>Pectus carinatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001680<a name=\"hpo-HP.580001680\"> </a></td><td>Coarctation of aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0000687<a name=\"hpo-HP.580000687\"> </a></td><td>Widely spaced teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000047<a name=\"hpo-HP.580000047\"> </a></td><td>Hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0001943<a name=\"hpo-HP.580001943\"> </a></td><td>Hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012369<a name=\"hpo-HP.580012369\"> </a></td><td>Abnormality of malar bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0009900<a name=\"hpo-HP.580009900\"> </a></td><td>Unilateral deafness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000023<a name=\"hpo-HP.580000023\"> </a></td><td>Inguinal hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000074<a name=\"hpo-HP.580000074\"> </a></td><td>Ureteropelvic junction obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001800<a name=\"hpo-HP.580001800\"> </a></td><td>Hypoplastic toenails</td></tr><tr><td style=\"white-space:nowrap\">HP:0001804<a name=\"hpo-HP.580001804\"> </a></td><td>Hypoplastic fingernail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002949<a name=\"hpo-HP.580002949\"> </a></td><td>Fused cervical vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0008050<a name=\"hpo-HP.580008050\"> </a></td><td>Abnormality of the palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0008577<a name=\"hpo-HP.580008577\"> </a></td><td>Underfolded helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0008589<a name=\"hpo-HP.580008589\"> </a></td><td>Hypoplastic helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0010863<a name=\"hpo-HP.580010863\"> </a></td><td>Receptive language delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0002282<a name=\"hpo-HP.580002282\"> </a></td><td>Gray matter heterotopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002085<a name=\"hpo-HP.580002085\"> </a></td><td>Occipital encephalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0001057<a name=\"hpo-HP.580001057\"> </a></td><td>Aplasia cutis congenita</td></tr><tr><td style=\"white-space:nowrap\">HP:0000211<a name=\"hpo-HP.580000211\"> </a></td><td>Trismus</td></tr><tr><td style=\"white-space:nowrap\">HP:0008422<a name=\"hpo-HP.580008422\"> </a></td><td>Vertebral wedging</td></tr><tr><td style=\"white-space:nowrap\">HP:0003170<a name=\"hpo-HP.580003170\"> </a></td><td>Abnormality of the acetabulum</td></tr><tr><td style=\"white-space:nowrap\">HP:0003272<a name=\"hpo-HP.580003272\"> </a></td><td>Abnormality of the hip bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0003028<a name=\"hpo-HP.580003028\"> </a></td><td>Abnormality of the ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0003301<a name=\"hpo-HP.580003301\"> </a></td><td>Irregular vertebral endplates</td></tr><tr><td style=\"white-space:nowrap\">HP:0010508<a name=\"hpo-HP.580010508\"> </a></td><td>Metatarsus valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0009811<a name=\"hpo-HP.580009811\"> </a></td><td>Abnormality of the elbow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000736<a name=\"hpo-HP.580000736\"> </a></td><td>Short attention span</td></tr><tr><td style=\"white-space:nowrap\">HP:0002912<a name=\"hpo-HP.580002912\"> </a></td><td>Methylmalonic acidemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001941<a name=\"hpo-HP.580001941\"> </a></td><td>Acidosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001992<a name=\"hpo-HP.580001992\"> </a></td><td>Organic aciduria</td></tr><tr><td style=\"white-space:nowrap\">HP:0009027<a name=\"hpo-HP.580009027\"> </a></td><td>Foot dorsiflexor weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002063<a name=\"hpo-HP.580002063\"> </a></td><td>Rigidity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000384<a name=\"hpo-HP.580000384\"> </a></td><td>Preauricular skin tag</td></tr><tr><td style=\"white-space:nowrap\">HP:0200046<a name=\"hpo-HP.580200046\"> </a></td><td>Cat cry</td></tr><tr><td style=\"white-space:nowrap\">HP:0001357<a name=\"hpo-HP.580001357\"> </a></td><td>Plagiocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000670<a name=\"hpo-HP.580000670\"> </a></td><td>Carious teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0011090<a name=\"hpo-HP.580011090\"> </a></td><td>Fused teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0012810<a name=\"hpo-HP.580012810\"> </a></td><td>Wide nasal base</td></tr><tr><td style=\"white-space:nowrap\">HP:0010296<a name=\"hpo-HP.580010296\"> </a></td><td>Ankyloglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001636<a name=\"hpo-HP.580001636\"> </a></td><td>Tetralogy of Fallot</td></tr><tr><td style=\"white-space:nowrap\">HP:0001305<a name=\"hpo-HP.580001305\"> </a></td><td>Dandy-Walker malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000238<a name=\"hpo-HP.580000238\"> </a></td><td>Hydrocephalus</td></tr><tr><td style=\"white-space:nowrap\">HP:0005469<a name=\"hpo-HP.580005469\"> </a></td><td>Flat occiput</td></tr><tr><td style=\"white-space:nowrap\">HP:0000270<a name=\"hpo-HP.580000270\"> </a></td><td>Delayed cranial suture closure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000239<a name=\"hpo-HP.580000239\"> </a></td><td>Large fontanelles</td></tr><tr><td style=\"white-space:nowrap\">HP:0010537<a name=\"hpo-HP.580010537\"> </a></td><td>Wide cranial sutures</td></tr><tr><td style=\"white-space:nowrap\">HP:0002217<a name=\"hpo-HP.580002217\"> </a></td><td>Slow-growing hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000587<a name=\"hpo-HP.580000587\"> </a></td><td>Abnormality of the optic nerve</td></tr><tr><td style=\"white-space:nowrap\">HP:0005989<a name=\"hpo-HP.580005989\"> </a></td><td>Redundant neck skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010775<a name=\"hpo-HP.580010775\"> </a></td><td>Vascular ring</td></tr><tr><td style=\"white-space:nowrap\">HP:0002779<a name=\"hpo-HP.580002779\"> </a></td><td>Tracheomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002827<a name=\"hpo-HP.580002827\"> </a></td><td>Hip dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001302<a name=\"hpo-HP.580001302\"> </a></td><td>Pachygyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0007362<a name=\"hpo-HP.580007362\"> </a></td><td>Aplasia/Hypoplasia of the brainstem</td></tr><tr><td style=\"white-space:nowrap\">HP:0001558<a name=\"hpo-HP.580001558\"> </a></td><td>Decreased fetal movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010878<a name=\"hpo-HP.580010878\"> </a></td><td>Fetal cystic hygroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0011398<a name=\"hpo-HP.580011398\"> </a></td><td>Central hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002071<a name=\"hpo-HP.580002071\"> </a></td><td>Abnormality of extrapyramidal motor function</td></tr><tr><td style=\"white-space:nowrap\">HP:0000826<a name=\"hpo-HP.580000826\"> </a></td><td>Precocious puberty</td></tr><tr><td style=\"white-space:nowrap\">HP:0000014<a name=\"hpo-HP.580000014\"> </a></td><td>Abnormality of the bladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0005037<a name=\"hpo-HP.580005037\"> </a></td><td>Proximal radio-ulnar synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100543<a name=\"hpo-HP.580100543\"> </a></td><td>Cognitive impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000481<a name=\"hpo-HP.580000481\"> </a></td><td>Abnormal cornea morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000076<a name=\"hpo-HP.580000076\"> </a></td><td>Vesicoureteral reflux</td></tr><tr><td style=\"white-space:nowrap\">HP:0000297<a name=\"hpo-HP.580000297\"> </a></td><td>Facial hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000391<a name=\"hpo-HP.580000391\"> </a></td><td>Thickened helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0001162<a name=\"hpo-HP.580001162\"> </a></td><td>Postaxial hand polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001385<a name=\"hpo-HP.580001385\"> </a></td><td>Hip dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002342<a name=\"hpo-HP.580002342\"> </a></td><td>Intellectual disability, moderate</td></tr><tr><td style=\"white-space:nowrap\">HP:0003191<a name=\"hpo-HP.580003191\"> </a></td><td>Cleft ala nasi</td></tr><tr><td style=\"white-space:nowrap\">HP:0009765<a name=\"hpo-HP.580009765\"> </a></td><td>Low hanging columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0010297<a name=\"hpo-HP.580010297\"> </a></td><td>Bifid tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0011330<a name=\"hpo-HP.580011330\"> </a></td><td>Metopic synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012804<a name=\"hpo-HP.580012804\"> </a></td><td>Corneal ulceration</td></tr><tr><td style=\"white-space:nowrap\">HP:0010485<a name=\"hpo-HP.580010485\"> </a></td><td>Hyperextensibility at elbow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000609<a name=\"hpo-HP.580000609\"> </a></td><td>Optic nerve hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001176<a name=\"hpo-HP.580001176\"> </a></td><td>Large hands</td></tr><tr><td style=\"white-space:nowrap\">HP:0004233<a name=\"hpo-HP.580004233\"> </a></td><td>Advanced ossification of carpal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0100842<a name=\"hpo-HP.580100842\"> </a></td><td>Septo-optic dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002034<a name=\"hpo-HP.580002034\"> </a></td><td>Abnormality of the rectum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002283<a name=\"hpo-HP.580002283\"> </a></td><td>Global brain atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003115<a name=\"hpo-HP.580003115\"> </a></td><td>Abnormal EKG</td></tr><tr><td style=\"white-space:nowrap\">HP:0002577<a name=\"hpo-HP.580002577\"> </a></td><td>Abnormal stomach morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002539<a name=\"hpo-HP.580002539\"> </a></td><td>Cortical dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006818<a name=\"hpo-HP.580006818\"> </a></td><td>4-layered lissencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000593<a name=\"hpo-HP.580000593\"> </a></td><td>Abnormal anterior chamber morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000179<a name=\"hpo-HP.580000179\"> </a></td><td>Thick lower lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002002<a name=\"hpo-HP.580002002\"> </a></td><td>Deep philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0009931<a name=\"hpo-HP.580009931\"> </a></td><td>Enlarged naris</td></tr><tr><td style=\"white-space:nowrap\">HP:0002948<a name=\"hpo-HP.580002948\"> </a></td><td>Vertebral fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002937<a name=\"hpo-HP.580002937\"> </a></td><td>Hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0002308<a name=\"hpo-HP.580002308\"> </a></td><td>Arnold-Chiari malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011320<a name=\"hpo-HP.580011320\"> </a></td><td>Unilambdoid synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002781<a name=\"hpo-HP.580002781\"> </a></td><td>Upper airway obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001363<a name=\"hpo-HP.580001363\"> </a></td><td>Craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000204<a name=\"hpo-HP.580000204\"> </a></td><td>Cleft upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001738<a name=\"hpo-HP.580001738\"> </a></td><td>Exocrine pancreatic insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002823<a name=\"hpo-HP.580002823\"> </a></td><td>Abnormality of femur morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000823<a name=\"hpo-HP.580000823\"> </a></td><td>Delayed puberty</td></tr><tr><td style=\"white-space:nowrap\">HP:0100279<a name=\"hpo-HP.580100279\"> </a></td><td>Ulcerative colitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003834<a name=\"hpo-HP.580003834\"> </a></td><td>Shoulder dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001065<a name=\"hpo-HP.580001065\"> </a></td><td>Striae distensae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000448<a name=\"hpo-HP.580000448\"> </a></td><td>Prominent nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0000554<a name=\"hpo-HP.580000554\"> </a></td><td>Uveitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001006<a name=\"hpo-HP.580001006\"> </a></td><td>obsolete Hypotrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000501<a name=\"hpo-HP.580000501\"> </a></td><td>Glaucoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000262<a name=\"hpo-HP.580000262\"> </a></td><td>Turricephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000729<a name=\"hpo-HP.580000729\"> </a></td><td>Autistic behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0010800<a name=\"hpo-HP.580010800\"> </a></td><td>Absent cupid's bow</td></tr><tr><td style=\"white-space:nowrap\">HP:0010808<a name=\"hpo-HP.580010808\"> </a></td><td>Protruding tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0009927<a name=\"hpo-HP.580009927\"> </a></td><td>Aplasia of the nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0100539<a name=\"hpo-HP.580100539\"> </a></td><td>Periorbital edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000629<a name=\"hpo-HP.580000629\"> </a></td><td>Periorbital fullness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000178<a name=\"hpo-HP.580000178\"> </a></td><td>Abnormality of lower lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000168<a name=\"hpo-HP.580000168\"> </a></td><td>Abnormality of the gingiva</td></tr><tr><td style=\"white-space:nowrap\">HP:0001022<a name=\"hpo-HP.580001022\"> </a></td><td>Albinism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000177<a name=\"hpo-HP.580000177\"> </a></td><td>Abnormality of upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001337<a name=\"hpo-HP.580001337\"> </a></td><td>Tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002135<a name=\"hpo-HP.580002135\"> </a></td><td>Basal ganglia calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0002352<a name=\"hpo-HP.580002352\"> </a></td><td>Leukoencephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002514<a name=\"hpo-HP.580002514\"> </a></td><td>Cerebral calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0010576<a name=\"hpo-HP.580010576\"> </a></td><td>Intracranial cystic lesion</td></tr><tr><td style=\"white-space:nowrap\">HP:0001622<a name=\"hpo-HP.580001622\"> </a></td><td>Premature birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002415<a name=\"hpo-HP.580002415\"> </a></td><td>Leukodystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001320<a name=\"hpo-HP.580001320\"> </a></td><td>Cerebellar vermis hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001773<a name=\"hpo-HP.580001773\"> </a></td><td>Short foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0002750<a name=\"hpo-HP.580002750\"> </a></td><td>Delayed skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004415<a name=\"hpo-HP.580004415\"> </a></td><td>Pulmonary artery stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012741<a name=\"hpo-HP.580012741\"> </a></td><td>Unilateral cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000036<a name=\"hpo-HP.580000036\"> </a></td><td>Abnormality of the penis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002408<a name=\"hpo-HP.580002408\"> </a></td><td>Cerebral arteriovenous malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0007457<a name=\"hpo-HP.580007457\"> </a></td><td>Prominent veins on trunk</td></tr><tr><td style=\"white-space:nowrap\">HP:0000378<a name=\"hpo-HP.580000378\"> </a></td><td>Cupped ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000396<a name=\"hpo-HP.580000396\"> </a></td><td>Overfolded helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000035<a name=\"hpo-HP.580000035\"> </a></td><td>Abnormal testis morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009895<a name=\"hpo-HP.580009895\"> </a></td><td>Abnormality of the crus of the helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000034<a name=\"hpo-HP.580000034\"> </a></td><td>Hydrocele testis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000722<a name=\"hpo-HP.580000722\"> </a></td><td>Obsessive-compulsive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000845<a name=\"hpo-HP.580000845\"> </a></td><td>Growth hormone excess</td></tr><tr><td style=\"white-space:nowrap\">HP:0100829<a name=\"hpo-HP.580100829\"> </a></td><td>Galactorrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001578<a name=\"hpo-HP.580001578\"> </a></td><td>Increased circulating cortisol level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000786<a name=\"hpo-HP.580000786\"> </a></td><td>Primary amenorrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001701<a name=\"hpo-HP.580001701\"> </a></td><td>Pericarditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002076<a name=\"hpo-HP.580002076\"> </a></td><td>Migraine</td></tr><tr><td style=\"white-space:nowrap\">HP:0004755<a name=\"hpo-HP.580004755\"> </a></td><td>Supraventricular tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010522<a name=\"hpo-HP.580010522\"> </a></td><td>Dyslexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004313<a name=\"hpo-HP.580004313\"> </a></td><td>Decreased circulating antibody level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000011<a name=\"hpo-HP.580000011\"> </a></td><td>Neurogenic bladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000641<a name=\"hpo-HP.580000641\"> </a></td><td>Dysmetric saccades</td></tr><tr><td style=\"white-space:nowrap\">HP:0007772<a name=\"hpo-HP.580007772\"> </a></td><td>Impaired smooth pursuit</td></tr><tr><td style=\"white-space:nowrap\">HP:0001583<a name=\"hpo-HP.580001583\"> </a></td><td>Rotary nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010544<a name=\"hpo-HP.580010544\"> </a></td><td>Vertical nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012735<a name=\"hpo-HP.580012735\"> </a></td><td>Cough</td></tr><tr><td style=\"white-space:nowrap\">HP:0002075<a name=\"hpo-HP.580002075\"> </a></td><td>Dysdiadochokinesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0007256<a name=\"hpo-HP.580007256\"> </a></td><td>Abnormal pyramidal sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0001257<a name=\"hpo-HP.580001257\"> </a></td><td>Spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002321<a name=\"hpo-HP.580002321\"> </a></td><td>Vertigo</td></tr><tr><td style=\"white-space:nowrap\">HP:0002384<a name=\"hpo-HP.580002384\"> </a></td><td>Focal impaired awareness seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011376<a name=\"hpo-HP.580011376\"> </a></td><td>Morphological abnormality of the vestibule of the inner ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0002326<a name=\"hpo-HP.580002326\"> </a></td><td>Transient ischemic attack</td></tr><tr><td style=\"white-space:nowrap\">HP:0005584<a name=\"hpo-HP.580005584\"> </a></td><td>Renal cell carcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0003124<a name=\"hpo-HP.580003124\"> </a></td><td>Hypercholesterolemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003002<a name=\"hpo-HP.580003002\"> </a></td><td>Breast carcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0004953<a name=\"hpo-HP.580004953\"> </a></td><td>obsolete Dilatation of abdominal aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0004944<a name=\"hpo-HP.580004944\"> </a></td><td>Dilatation of the cerebral artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0000100<a name=\"hpo-HP.580000100\"> </a></td><td>Nephrotic syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002783<a name=\"hpo-HP.580002783\"> </a></td><td>Recurrent lower respiratory tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0003470<a name=\"hpo-HP.580003470\"> </a></td><td>Paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006597<a name=\"hpo-HP.580006597\"> </a></td><td>Diaphragmatic paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008151<a name=\"hpo-HP.580008151\"> </a></td><td>Prolonged prothrombin time</td></tr><tr><td style=\"white-space:nowrap\">HP:0010628<a name=\"hpo-HP.580010628\"> </a></td><td>Facial palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011892<a name=\"hpo-HP.580011892\"> </a></td><td>Low levels of vitamin K</td></tr><tr><td style=\"white-space:nowrap\">HP:0001075<a name=\"hpo-HP.580001075\"> </a></td><td>Atrophic scars</td></tr><tr><td style=\"white-space:nowrap\">HP:0001816<a name=\"hpo-HP.580001816\"> </a></td><td>Thin nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002216<a name=\"hpo-HP.580002216\"> </a></td><td>Premature graying of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0003401<a name=\"hpo-HP.580003401\"> </a></td><td>Paresthesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100134<a name=\"hpo-HP.580100134\"> </a></td><td>Abnormality of the axillary hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0100797<a name=\"hpo-HP.580100797\"> </a></td><td>Toenail dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010461<a name=\"hpo-HP.580010461\"> </a></td><td>Abnormality of the male genitalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000044<a name=\"hpo-HP.580000044\"> </a></td><td>Hypogonadotropic hypogonadism</td></tr><tr><td style=\"white-space:nowrap\">HP:0100568<a name=\"hpo-HP.580100568\"> </a></td><td>Neoplasm of the endocrine system</td></tr><tr><td style=\"white-space:nowrap\">HP:0001646<a name=\"hpo-HP.580001646\"> </a></td><td>Abnormal aortic valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000813<a name=\"hpo-HP.580000813\"> </a></td><td>Bicornuate uterus</td></tr><tr><td style=\"white-space:nowrap\">HP:0004380<a name=\"hpo-HP.580004380\"> </a></td><td>Aortic valve calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0001650<a name=\"hpo-HP.580001650\"> </a></td><td>Aortic valve stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000073<a name=\"hpo-HP.580000073\"> </a></td><td>Ureteral duplication</td></tr><tr><td style=\"white-space:nowrap\">HP:0100651<a name=\"hpo-HP.580100651\"> </a></td><td>Type I diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000819<a name=\"hpo-HP.580000819\"> </a></td><td>Diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000573<a name=\"hpo-HP.580000573\"> </a></td><td>Retinal hemorrhage</td></tr><tr><td style=\"white-space:nowrap\">HP:0005264<a name=\"hpo-HP.580005264\"> </a></td><td>Abnormality of the gallbladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000475<a name=\"hpo-HP.580000475\"> </a></td><td>Broad neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000089<a name=\"hpo-HP.580000089\"> </a></td><td>Renal hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000921<a name=\"hpo-HP.580000921\"> </a></td><td>Missing ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0001789<a name=\"hpo-HP.580001789\"> </a></td><td>Hydrops fetalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002089<a name=\"hpo-HP.580002089\"> </a></td><td>Pulmonary hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003422<a name=\"hpo-HP.580003422\"> </a></td><td>Vertebral segmentation defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002323<a name=\"hpo-HP.580002323\"> </a></td><td>Anencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000341<a name=\"hpo-HP.580000341\"> </a></td><td>Narrow forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0002869<a name=\"hpo-HP.580002869\"> </a></td><td>Flared iliac wings</td></tr><tr><td style=\"white-space:nowrap\">HP:0003100<a name=\"hpo-HP.580003100\"> </a></td><td>Slender long bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0003275<a name=\"hpo-HP.580003275\"> </a></td><td>Narrow pelvis bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0009891<a name=\"hpo-HP.580009891\"> </a></td><td>Underdeveloped supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0011039<a name=\"hpo-HP.580011039\"> </a></td><td>Abnormality of the helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0008572<a name=\"hpo-HP.580008572\"> </a></td><td>External ear malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0009738<a name=\"hpo-HP.580009738\"> </a></td><td>Abnormality of the antihelix</td></tr><tr><td style=\"white-space:nowrap\">HP:0011328<a name=\"hpo-HP.580011328\"> </a></td><td>Abnormality of fontanelles</td></tr><tr><td style=\"white-space:nowrap\">HP:0012155<a name=\"hpo-HP.580012155\"> </a></td><td>Decreased corneal sensation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004602<a name=\"hpo-HP.580004602\"> </a></td><td>Cervical C2/C3 vertebral fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002997<a name=\"hpo-HP.580002997\"> </a></td><td>Abnormality of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0009777<a name=\"hpo-HP.580009777\"> </a></td><td>Absent thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002893<a name=\"hpo-HP.580002893\"> </a></td><td>Pituitary adenoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0040278<a name=\"hpo-HP.580040278\"> </a></td><td>Prolactinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001555<a name=\"hpo-HP.580001555\"> </a></td><td>Asymmetry of the thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0000902<a name=\"hpo-HP.580000902\"> </a></td><td>Rib fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002164<a name=\"hpo-HP.580002164\"> </a></td><td>Nail dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011314<a name=\"hpo-HP.580011314\"> </a></td><td>Abnormality of long bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002867<a name=\"hpo-HP.580002867\"> </a></td><td>Abnormality of the ilium</td></tr><tr><td style=\"white-space:nowrap\">HP:0000774<a name=\"hpo-HP.580000774\"> </a></td><td>Narrow chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0006482<a name=\"hpo-HP.580006482\"> </a></td><td>Abnormality of dental morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0004383<a name=\"hpo-HP.580004383\"> </a></td><td>Hypoplastic left heart</td></tr><tr><td style=\"white-space:nowrap\">HP:0002015<a name=\"hpo-HP.580002015\"> </a></td><td>Dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0500093<a name=\"hpo-HP.580500093\"> </a></td><td>Food allergy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001519<a name=\"hpo-HP.580001519\"> </a></td><td>Disproportionate tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0003179<a name=\"hpo-HP.580003179\"> </a></td><td>Protrusio acetabuli</td></tr><tr><td style=\"white-space:nowrap\">HP:0007385<a name=\"hpo-HP.580007385\"> </a></td><td>Aplasia cutis congenita of scalp</td></tr><tr><td style=\"white-space:nowrap\">HP:0000716<a name=\"hpo-HP.580000716\"> </a></td><td>Depressivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0012583<a name=\"hpo-HP.580012583\"> </a></td><td>Unilateral renal hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000618<a name=\"hpo-HP.580000618\"> </a></td><td>Blindness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001004<a name=\"hpo-HP.580001004\"> </a></td><td>Lymphedema</td></tr><tr><td style=\"white-space:nowrap\">HP:0002652<a name=\"hpo-HP.580002652\"> </a></td><td>Skeletal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012520<a name=\"hpo-HP.580012520\"> </a></td><td>Perivascular spaces</td></tr><tr><td style=\"white-space:nowrap\">HP:0005293<a name=\"hpo-HP.580005293\"> </a></td><td>Venous insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0012432<a name=\"hpo-HP.580012432\"> </a></td><td>Chronic fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002578<a name=\"hpo-HP.580002578\"> </a></td><td>Gastroparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001658<a name=\"hpo-HP.580001658\"> </a></td><td>Myocardial infarction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001802<a name=\"hpo-HP.580001802\"> </a></td><td>Absent toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0001821<a name=\"hpo-HP.580001821\"> </a></td><td>Broad nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0000807<a name=\"hpo-HP.580000807\"> </a></td><td>Glandular hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0100582<a name=\"hpo-HP.580100582\"> </a></td><td>Nasal polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002653<a name=\"hpo-HP.580002653\"> </a></td><td>Bone pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0001073<a name=\"hpo-HP.580001073\"> </a></td><td>Cigarette-paper scars</td></tr><tr><td style=\"white-space:nowrap\">HP:0031913<a name=\"hpo-HP.580031913\"> </a></td><td>Rhombencephalosynapsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002617<a name=\"hpo-HP.580002617\"> </a></td><td>Dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005107<a name=\"hpo-HP.580005107\"> </a></td><td>Abnormal sacrum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002025<a name=\"hpo-HP.580002025\"> </a></td><td>Anal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0009099<a name=\"hpo-HP.580009099\"> </a></td><td>Median cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0003212<a name=\"hpo-HP.580003212\"> </a></td><td>Increased circulating IgE level</td></tr><tr><td style=\"white-space:nowrap\">HP:0001319<a name=\"hpo-HP.580001319\"> </a></td><td>Neonatal hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002659<a name=\"hpo-HP.580002659\"> </a></td><td>Increased susceptibility to fractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0025246<a name=\"hpo-HP.580025246\"> </a></td><td>Trichilemmal cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0002107<a name=\"hpo-HP.580002107\"> </a></td><td>Pneumothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0000107<a name=\"hpo-HP.580000107\"> </a></td><td>Renal cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0001025<a name=\"hpo-HP.580001025\"> </a></td><td>Urticaria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002204<a name=\"hpo-HP.580002204\"> </a></td><td>Pulmonary embolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001058<a name=\"hpo-HP.580001058\"> </a></td><td>Poor wound healing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003010<a name=\"hpo-HP.580003010\"> </a></td><td>Prolonged bleeding time</td></tr><tr><td style=\"white-space:nowrap\">HP:0100502<a name=\"hpo-HP.580100502\"> </a></td><td>Vitamin B12 deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0100510<a name=\"hpo-HP.580100510\"> </a></td><td>Low levels of vitamin C</td></tr><tr><td style=\"white-space:nowrap\">HP:0030976<a name=\"hpo-HP.580030976\"> </a></td><td>Abnormal factor VIII activity</td></tr><tr><td style=\"white-space:nowrap\">HP:0100789<a name=\"hpo-HP.580100789\"> </a></td><td>Torus palatinus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000108<a name=\"hpo-HP.580000108\"> </a></td><td>Renal corticomedullary cysts</td></tr><tr><td style=\"white-space:nowrap\">HP:0000072<a name=\"hpo-HP.580000072\"> </a></td><td>Hydroureter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000019<a name=\"hpo-HP.580000019\"> </a></td><td>Urinary hesitancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100771<a name=\"hpo-HP.580100771\"> </a></td><td>Hypoperistalsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000021<a name=\"hpo-HP.580000021\"> </a></td><td>Megacystis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004388<a name=\"hpo-HP.580004388\"> </a></td><td>Microcolon</td></tr><tr><td style=\"white-space:nowrap\">HP:0005247<a name=\"hpo-HP.580005247\"> </a></td><td>Hypoplasia of the abdominal wall musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0004794<a name=\"hpo-HP.580004794\"> </a></td><td>Malrotation of small bowel</td></tr><tr><td style=\"white-space:nowrap\">HP:0000045<a name=\"hpo-HP.580000045\"> </a></td><td>Abnormality of the scrotum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002236<a name=\"hpo-HP.580002236\"> </a></td><td>Frontal upsweep of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000212<a name=\"hpo-HP.580000212\"> </a></td><td>Gingival overgrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001808<a name=\"hpo-HP.580001808\"> </a></td><td>Fragile nails</td></tr><tr><td style=\"white-space:nowrap\">HP:0000225<a name=\"hpo-HP.580000225\"> </a></td><td>Gingival bleeding</td></tr><tr><td style=\"white-space:nowrap\">HP:0006009<a name=\"hpo-HP.580006009\"> </a></td><td>Broad phalanx</td></tr><tr><td style=\"white-space:nowrap\">HP:0001837<a name=\"hpo-HP.580001837\"> </a></td><td>Broad toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001946<a name=\"hpo-HP.580001946\"> </a></td><td>Ketosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002490<a name=\"hpo-HP.580002490\"> </a></td><td>Increased CSF lactate</td></tr><tr><td style=\"white-space:nowrap\">HP:0002922<a name=\"hpo-HP.580002922\"> </a></td><td>Increased CSF protein</td></tr><tr><td style=\"white-space:nowrap\">HP:0003128<a name=\"hpo-HP.580003128\"> </a></td><td>Lactic acidosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003111<a name=\"hpo-HP.580003111\"> </a></td><td>Abnormal blood ion concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0032234<a name=\"hpo-HP.580032234\"> </a></td><td>Increased circulating creatine kinase MM isoform</td></tr><tr><td style=\"white-space:nowrap\">HP:0003348<a name=\"hpo-HP.580003348\"> </a></td><td>Hyperalaninemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008347<a name=\"hpo-HP.580008347\"> </a></td><td>Decreased activity of mitochondrial complex IV</td></tr><tr><td style=\"white-space:nowrap\">HP:0000326<a name=\"hpo-HP.580000326\"> </a></td><td>Abnormality of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0010758<a name=\"hpo-HP.580010758\"> </a></td><td>Abnormality of the premaxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0005681<a name=\"hpo-HP.580005681\"> </a></td><td>Juvenile rheumatoid arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000514<a name=\"hpo-HP.580000514\"> </a></td><td>Slow saccadic eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0002788<a name=\"hpo-HP.580002788\"> </a></td><td>Recurrent upper respiratory tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0003396<a name=\"hpo-HP.580003396\"> </a></td><td>Syringomyelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003011<a name=\"hpo-HP.580003011\"> </a></td><td>Abnormality of the musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0002098<a name=\"hpo-HP.580002098\"> </a></td><td>Respiratory distress</td></tr><tr><td style=\"white-space:nowrap\">HP:0002018<a name=\"hpo-HP.580002018\"> </a></td><td>Nausea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002014<a name=\"hpo-HP.580002014\"> </a></td><td>Diarrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0025168<a name=\"hpo-HP.580025168\"> </a></td><td>Left ventricular diastolic dysfunction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001679<a name=\"hpo-HP.580001679\"> </a></td><td>Abnormal aortic morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000159<a name=\"hpo-HP.580000159\"> </a></td><td>Abnormal lip morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011338<a name=\"hpo-HP.580011338\"> </a></td><td>Abnormality of mouth shape</td></tr><tr><td style=\"white-space:nowrap\">HP:0000478<a name=\"hpo-HP.580000478\"> </a></td><td>Abnormality of the eye</td></tr><tr><td style=\"white-space:nowrap\">HP:0000154<a name=\"hpo-HP.580000154\"> </a></td><td>Wide mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001513<a name=\"hpo-HP.580001513\"> </a></td><td>Obesity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002475<a name=\"hpo-HP.580002475\"> </a></td><td>Myelomeningocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0003765<a name=\"hpo-HP.580003765\"> </a></td><td>Psoriasiform dermatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010289<a name=\"hpo-HP.580010289\"> </a></td><td>Cleft of alveolar ridge of maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0003908<a name=\"hpo-HP.580003908\"> </a></td><td>Corner fracture of metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002190<a name=\"hpo-HP.580002190\"> </a></td><td>Choroid plexus cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0004370<a name=\"hpo-HP.580004370\"> </a></td><td>Abnormality of temperature regulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011611<a name=\"hpo-HP.580011611\"> </a></td><td>Interrupted aortic arch</td></tr><tr><td style=\"white-space:nowrap\">HP:0000737<a name=\"hpo-HP.580000737\"> </a></td><td>Irritability</td></tr><tr><td style=\"white-space:nowrap\">HP:0001344<a name=\"hpo-HP.580001344\"> </a></td><td>Absent speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0002376<a name=\"hpo-HP.580002376\"> </a></td><td>Developmental regression</td></tr><tr><td style=\"white-space:nowrap\">HP:0002140<a name=\"hpo-HP.580002140\"> </a></td><td>Ischemic stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0001287<a name=\"hpo-HP.580001287\"> </a></td><td>Meningitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002721<a name=\"hpo-HP.580002721\"> </a></td><td>Immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000041<a name=\"hpo-HP.580000041\"> </a></td><td>Chordee</td></tr><tr><td style=\"white-space:nowrap\">HP:0012854<a name=\"hpo-HP.580012854\"> </a></td><td>Midshaft hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0000808<a name=\"hpo-HP.580000808\"> </a></td><td>Penoscrotal hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0000048<a name=\"hpo-HP.580000048\"> </a></td><td>Bifid scrotum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001047<a name=\"hpo-HP.580001047\"> </a></td><td>Atopic dermatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001621<a name=\"hpo-HP.580001621\"> </a></td><td>Weak voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0002372<a name=\"hpo-HP.580002372\"> </a></td><td>Normal interictal EEG</td></tr><tr><td style=\"white-space:nowrap\">HP:0012803<a name=\"hpo-HP.580012803\"> </a></td><td>Anisometropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011386<a name=\"hpo-HP.580011386\"> </a></td><td>Narrow internal auditory canal</td></tr><tr><td style=\"white-space:nowrap\">HP:0012714<a name=\"hpo-HP.580012714\"> </a></td><td>Severe hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0006485<a name=\"hpo-HP.580006485\"> </a></td><td>Agenesis of incisor</td></tr><tr><td style=\"white-space:nowrap\">HP:0000787<a name=\"hpo-HP.580000787\"> </a></td><td>Nephrolithiasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011332<a name=\"hpo-HP.580011332\"> </a></td><td>Hemifacial hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001909<a name=\"hpo-HP.580001909\"> </a></td><td>Leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004808<a name=\"hpo-HP.580004808\"> </a></td><td>Acute myeloid leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006495<a name=\"hpo-HP.580006495\"> </a></td><td>Aplasia/Hypoplasia of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0001180<a name=\"hpo-HP.580001180\"> </a></td><td>Hand oligodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002991<a name=\"hpo-HP.580002991\"> </a></td><td>Abnormality of fibula morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001849<a name=\"hpo-HP.580001849\"> </a></td><td>Foot oligodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0006507<a name=\"hpo-HP.580006507\"> </a></td><td>Aplasia/hypoplasia of the humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0005613<a name=\"hpo-HP.580005613\"> </a></td><td>Aplasia/hypoplasia of the femur</td></tr><tr><td style=\"white-space:nowrap\">HP:0006492<a name=\"hpo-HP.580006492\"> </a></td><td>Aplasia/Hypoplasia of the fibula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000098<a name=\"hpo-HP.580000098\"> </a></td><td>Tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0003311<a name=\"hpo-HP.580003311\"> </a></td><td>Hypoplasia of the odontoid process</td></tr><tr><td style=\"white-space:nowrap\">HP:0005752<a name=\"hpo-HP.580005752\"> </a></td><td>Flattened moderately deformed vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0030039<a name=\"hpo-HP.580030039\"> </a></td><td>Fused thoracic vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0003304<a name=\"hpo-HP.580003304\"> </a></td><td>Spondylolysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001659<a name=\"hpo-HP.580001659\"> </a></td><td>Aortic regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002984<a name=\"hpo-HP.580002984\"> </a></td><td>Hypoplasia of the radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0009944<a name=\"hpo-HP.580009944\"> </a></td><td>Partial duplication of thumb phalanx</td></tr><tr><td style=\"white-space:nowrap\">HP:0005819<a name=\"hpo-HP.580005819\"> </a></td><td>Short middle phalanx of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0002110<a name=\"hpo-HP.580002110\"> </a></td><td>Bronchiectasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001677<a name=\"hpo-HP.580001677\"> </a></td><td>Coronary artery atherosclerosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001737<a name=\"hpo-HP.580001737\"> </a></td><td>Pancreatic cysts</td></tr><tr><td style=\"white-space:nowrap\">HP:0005113<a name=\"hpo-HP.580005113\"> </a></td><td>Aortic arch aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003022<a name=\"hpo-HP.580003022\"> </a></td><td>Hypoplasia of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0002205<a name=\"hpo-HP.580002205\"> </a></td><td>Recurrent respiratory infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0001669<a name=\"hpo-HP.580001669\"> </a></td><td>Transposition of the great arteries</td></tr><tr><td style=\"white-space:nowrap\">HP:0001716<a name=\"hpo-HP.580001716\"> </a></td><td>Wolff-Parkinson-White syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002758<a name=\"hpo-HP.580002758\"> </a></td><td>Osteoarthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002037<a name=\"hpo-HP.580002037\"> </a></td><td>Inflammation of the large intestine</td></tr><tr><td style=\"white-space:nowrap\">HP:0009892<a name=\"hpo-HP.580009892\"> </a></td><td>Anotia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011331<a name=\"hpo-HP.580011331\"> </a></td><td>Hemifacial atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0009118<a name=\"hpo-HP.580009118\"> </a></td><td>Aplasia/Hypoplasia of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0009940<a name=\"hpo-HP.580009940\"> </a></td><td>Asymmetry of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000682<a name=\"hpo-HP.580000682\"> </a></td><td>Abnormality of dental enamel</td></tr><tr><td style=\"white-space:nowrap\">HP:0009908<a name=\"hpo-HP.580009908\"> </a></td><td>Anterior creases of earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001541<a name=\"hpo-HP.580001541\"> </a></td><td>Ascites</td></tr><tr><td style=\"white-space:nowrap\">HP:0006687<a name=\"hpo-HP.580006687\"> </a></td><td>Aortic tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0010535<a name=\"hpo-HP.580010535\"> </a></td><td>Sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0100633<a name=\"hpo-HP.580100633\"> </a></td><td>Esophagitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002105<a name=\"hpo-HP.580002105\"> </a></td><td>Hemoptysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002613<a name=\"hpo-HP.580002613\"> </a></td><td>Biliary cirrhosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004469<a name=\"hpo-HP.580004469\"> </a></td><td>Chronic bronchitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002720<a name=\"hpo-HP.580002720\"> </a></td><td>Decreased circulating IgA level</td></tr><tr><td style=\"white-space:nowrap\">HP:0002904<a name=\"hpo-HP.580002904\"> </a></td><td>Hyperbilirubinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003237<a name=\"hpo-HP.580003237\"> </a></td><td>Increased circulating IgG level</td></tr><tr><td style=\"white-space:nowrap\">HP:0003262<a name=\"hpo-HP.580003262\"> </a></td><td>Smooth muscle antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0011227<a name=\"hpo-HP.580011227\"> </a></td><td>Elevated C-reactive protein level</td></tr><tr><td style=\"white-space:nowrap\">HP:0001852<a name=\"hpo-HP.580001852\"> </a></td><td>Sandal gap</td></tr><tr><td style=\"white-space:nowrap\">HP:0004381<a name=\"hpo-HP.580004381\"> </a></td><td>Supravalvular aortic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100700<a name=\"hpo-HP.580100700\"> </a></td><td>Abnormal arachnoid mater morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002624<a name=\"hpo-HP.580002624\"> </a></td><td>Abnormal venous morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002289<a name=\"hpo-HP.580002289\"> </a></td><td>Alopecia universalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0009588<a name=\"hpo-HP.580009588\"> </a></td><td>Vestibular Schwannoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001648<a name=\"hpo-HP.580001648\"> </a></td><td>Cor pulmonale</td></tr><tr><td style=\"white-space:nowrap\">HP:0002091<a name=\"hpo-HP.580002091\"> </a></td><td>Restrictive ventilatory defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002092<a name=\"hpo-HP.580002092\"> </a></td><td>Pulmonary arterial hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0002113<a name=\"hpo-HP.580002113\"> </a></td><td>Pulmonary infiltrates</td></tr><tr><td style=\"white-space:nowrap\">HP:0003138<a name=\"hpo-HP.580003138\"> </a></td><td>Increased blood urea nitrogen</td></tr><tr><td style=\"white-space:nowrap\">HP:0003259<a name=\"hpo-HP.580003259\"> </a></td><td>Elevated serum creatinine</td></tr><tr><td style=\"white-space:nowrap\">HP:0005180<a name=\"hpo-HP.580005180\"> </a></td><td>Tricuspid regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0012585<a name=\"hpo-HP.580012585\"> </a></td><td>Renal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005133<a name=\"hpo-HP.580005133\"> </a></td><td>Right ventricular dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005575<a name=\"hpo-HP.580005575\"> </a></td><td>Hemolytic-uremic syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0001697<a name=\"hpo-HP.580001697\"> </a></td><td>Abnormal pericardium morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012486<a name=\"hpo-HP.580012486\"> </a></td><td>Myelitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002385<a name=\"hpo-HP.580002385\"> </a></td><td>Paraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006706<a name=\"hpo-HP.580006706\"> </a></td><td>Cystic liver disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0010880<a name=\"hpo-HP.580010880\"> </a></td><td>Increased nuchal translucency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000457<a name=\"hpo-HP.580000457\"> </a></td><td>Depressed nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0002263<a name=\"hpo-HP.580002263\"> </a></td><td>Exaggerated cupid's bow</td></tr><tr><td style=\"white-space:nowrap\">HP:0002500<a name=\"hpo-HP.580002500\"> </a></td><td>Abnormality of the cerebral white matter</td></tr><tr><td style=\"white-space:nowrap\">HP:0002835<a name=\"hpo-HP.580002835\"> </a></td><td>Aspiration</td></tr><tr><td style=\"white-space:nowrap\">HP:0000600<a name=\"hpo-HP.580000600\"> </a></td><td>Abnormality of the pharynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0004327<a name=\"hpo-HP.580004327\"> </a></td><td>Abnormal vitreous humor morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0004378<a name=\"hpo-HP.580004378\"> </a></td><td>Abnormality of the anus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012374<a name=\"hpo-HP.580012374\"> </a></td><td>obsolete Abnormal globe morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100768<a name=\"hpo-HP.580100768\"> </a></td><td>Choriocarcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0030991<a name=\"hpo-HP.580030991\"> </a></td><td>Sclerosing cholangitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006510<a name=\"hpo-HP.580006510\"> </a></td><td>Chronic pulmonary obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0000710<a name=\"hpo-HP.580000710\"> </a></td><td>Hyperorality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001270<a name=\"hpo-HP.580001270\"> </a></td><td>Motor delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0001548<a name=\"hpo-HP.580001548\"> </a></td><td>Overgrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002311<a name=\"hpo-HP.580002311\"> </a></td><td>Incoordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0006288<a name=\"hpo-HP.580006288\"> </a></td><td>Advanced eruption of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0006323<a name=\"hpo-HP.580006323\"> </a></td><td>Premature loss of primary teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009890<a name=\"hpo-HP.580009890\"> </a></td><td>High anterior hairline</td></tr><tr><td style=\"white-space:nowrap\">HP:0100034<a name=\"hpo-HP.580100034\"> </a></td><td>Motor tics</td></tr><tr><td style=\"white-space:nowrap\">HP:0100035<a name=\"hpo-HP.580100035\"> </a></td><td>Phonic tics</td></tr><tr><td style=\"white-space:nowrap\">HP:0000348<a name=\"hpo-HP.580000348\"> </a></td><td>High forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0001520<a name=\"hpo-HP.580001520\"> </a></td><td>Large for gestational age</td></tr><tr><td style=\"white-space:nowrap\">HP:0001239<a name=\"hpo-HP.580001239\"> </a></td><td>Wrist flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0007359<a name=\"hpo-HP.580007359\"> </a></td><td>Focal-onset seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000430<a name=\"hpo-HP.580000430\"> </a></td><td>Underdeveloped nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0007400<a name=\"hpo-HP.580007400\"> </a></td><td>Irregular hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0100495<a name=\"hpo-HP.580100495\"> </a></td><td>Mastocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012378<a name=\"hpo-HP.580012378\"> </a></td><td>Fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002046<a name=\"hpo-HP.580002046\"> </a></td><td>Heat intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0003270<a name=\"hpo-HP.580003270\"> </a></td><td>Abdominal distention</td></tr><tr><td style=\"white-space:nowrap\">HP:0002180<a name=\"hpo-HP.580002180\"> </a></td><td>Neurodegeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0003493<a name=\"hpo-HP.580003493\"> </a></td><td>Antinuclear antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0030057<a name=\"hpo-HP.580030057\"> </a></td><td>Autoimmune antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0006802<a name=\"hpo-HP.580006802\"> </a></td><td>Abnormal anterior horn cell morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000064<a name=\"hpo-HP.580000064\"> </a></td><td>Hypoplastic labia minora</td></tr><tr><td style=\"white-space:nowrap\">HP:0000338<a name=\"hpo-HP.580000338\"> </a></td><td>Hypomimic face</td></tr><tr><td style=\"white-space:nowrap\">HP:0001642<a name=\"hpo-HP.580001642\"> </a></td><td>Pulmonic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011344<a name=\"hpo-HP.580011344\"> </a></td><td>Severe global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0200007<a name=\"hpo-HP.580200007\"> </a></td><td>Abnormal size of the palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0004464<a name=\"hpo-HP.580004464\"> </a></td><td>Postauricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0000130<a name=\"hpo-HP.580000130\"> </a></td><td>Abnormality of the uterus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000137<a name=\"hpo-HP.580000137\"> </a></td><td>Abnormality of the ovary</td></tr><tr><td style=\"white-space:nowrap\">HP:0000142<a name=\"hpo-HP.580000142\"> </a></td><td>Abnormal vagina morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000370<a name=\"hpo-HP.580000370\"> </a></td><td>Abnormality of the middle ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0011787<a name=\"hpo-HP.580011787\"> </a></td><td>Central hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000274<a name=\"hpo-HP.580000274\"> </a></td><td>Small face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000446<a name=\"hpo-HP.580000446\"> </a></td><td>Narrow nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000622<a name=\"hpo-HP.580000622\"> </a></td><td>Blurred vision</td></tr><tr><td style=\"white-space:nowrap\">HP:0001245<a name=\"hpo-HP.580001245\"> </a></td><td>Small thenar eminence</td></tr><tr><td style=\"white-space:nowrap\">HP:0009601<a name=\"hpo-HP.580009601\"> </a></td><td>Aplasia/Hypoplasia of the thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0011343<a name=\"hpo-HP.580011343\"> </a></td><td>Moderate global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0000419<a name=\"hpo-HP.580000419\"> </a></td><td>Abnormality of the nasal septum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000502<a name=\"hpo-HP.580000502\"> </a></td><td>Abnormal conjunctiva morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000591<a name=\"hpo-HP.580000591\"> </a></td><td>Abnormal sclera morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000615<a name=\"hpo-HP.580000615\"> </a></td><td>Abnormal pupil morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001163<a name=\"hpo-HP.580001163\"> </a></td><td>Abnormality of the metacarpal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0001832<a name=\"hpo-HP.580001832\"> </a></td><td>Abnormal metatarsal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001850<a name=\"hpo-HP.580001850\"> </a></td><td>Abnormality of the tarsal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0010490<a name=\"hpo-HP.580010490\"> </a></td><td>Abnormality of the palmar creases</td></tr><tr><td style=\"white-space:nowrap\">HP:0010881<a name=\"hpo-HP.580010881\"> </a></td><td>Abnormality of the umbilical cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0009113<a name=\"hpo-HP.580009113\"> </a></td><td>Diaphragmatic weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0011664<a name=\"hpo-HP.580011664\"> </a></td><td>Left ventricular noncompaction cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100240<a name=\"hpo-HP.580100240\"> </a></td><td>Synostosis of joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0001838<a name=\"hpo-HP.580001838\"> </a></td><td>Rocker bottom foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0003717<a name=\"hpo-HP.580003717\"> </a></td><td>Minimal subcutaneous fat</td></tr><tr><td style=\"white-space:nowrap\">HP:0001339<a name=\"hpo-HP.580001339\"> </a></td><td>Lissencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001591<a name=\"hpo-HP.580001591\"> </a></td><td>Bell-shaped thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0002655<a name=\"hpo-HP.580002655\"> </a></td><td>Spondyloepiphyseal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002983<a name=\"hpo-HP.580002983\"> </a></td><td>Micromelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003016<a name=\"hpo-HP.580003016\"> </a></td><td>Metaphyseal widening</td></tr><tr><td style=\"white-space:nowrap\">HP:0009826<a name=\"hpo-HP.580009826\"> </a></td><td>Limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0004488<a name=\"hpo-HP.580004488\"> </a></td><td>Macrocephaly at birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001695<a name=\"hpo-HP.580001695\"> </a></td><td>Cardiac arrest</td></tr><tr><td style=\"white-space:nowrap\">HP:0001712<a name=\"hpo-HP.580001712\"> </a></td><td>Left ventricular hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100775<a name=\"hpo-HP.580100775\"> </a></td><td>Dural ectasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000846<a name=\"hpo-HP.580000846\"> </a></td><td>Adrenal insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002925<a name=\"hpo-HP.580002925\"> </a></td><td>Increased thyroid-stimulating hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0100646<a name=\"hpo-HP.580100646\"> </a></td><td>Thyroiditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000836<a name=\"hpo-HP.580000836\"> </a></td><td>Hyperthyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0004414<a name=\"hpo-HP.580004414\"> </a></td><td>Abnormality of the pulmonary artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0000465<a name=\"hpo-HP.580000465\"> </a></td><td>Webbed neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000723<a name=\"hpo-HP.580000723\"> </a></td><td>Restrictive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0002253<a name=\"hpo-HP.580002253\"> </a></td><td>Colonic diverticula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001310<a name=\"hpo-HP.580001310\"> </a></td><td>Dysmetria</td></tr><tr><td style=\"white-space:nowrap\">HP:0000093<a name=\"hpo-HP.580000093\"> </a></td><td>Proteinuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002907<a name=\"hpo-HP.580002907\"> </a></td><td>Microscopic hematuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0003073<a name=\"hpo-HP.580003073\"> </a></td><td>Hypoalbuminemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004315<a name=\"hpo-HP.580004315\"> </a></td><td>Decreased circulating IgG level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000795<a name=\"hpo-HP.580000795\"> </a></td><td>Abnormality of the urethra</td></tr><tr><td style=\"white-space:nowrap\">HP:0001015<a name=\"hpo-HP.580001015\"> </a></td><td>Prominent superficial veins</td></tr><tr><td style=\"white-space:nowrap\">HP:0004691<a name=\"hpo-HP.580004691\"> </a></td><td>2-3 toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005328<a name=\"hpo-HP.580005328\"> </a></td><td>Progeroid facial appearance</td></tr><tr><td style=\"white-space:nowrap\">HP:0005487<a name=\"hpo-HP.580005487\"> </a></td><td>Prominent metopic ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0007552<a name=\"hpo-HP.580007552\"> </a></td><td>Abnormal subcutaneous fat tissue distribution</td></tr><tr><td style=\"white-space:nowrap\">HP:0100678<a name=\"hpo-HP.580100678\"> </a></td><td>Premature skin wrinkling</td></tr><tr><td style=\"white-space:nowrap\">HP:0031137<a name=\"hpo-HP.580031137\"> </a></td><td>Storage in hepatocytes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002521<a name=\"hpo-HP.580002521\"> </a></td><td>Hypsarrhythmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005390<a name=\"hpo-HP.580005390\"> </a></td><td>Recurrent opportunistic infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0002716<a name=\"hpo-HP.580002716\"> </a></td><td>Lymphadenopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005379<a name=\"hpo-HP.580005379\"> </a></td><td>obsolete Severe T lymphocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004432<a name=\"hpo-HP.580004432\"> </a></td><td>Agammaglobulinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006695<a name=\"hpo-HP.580006695\"> </a></td><td>Atrioventricular canal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0001733<a name=\"hpo-HP.580001733\"> </a></td><td>Pancreatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002350<a name=\"hpo-HP.580002350\"> </a></td><td>Cerebellar cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0012110<a name=\"hpo-HP.580012110\"> </a></td><td>Hypoplasia of the pons</td></tr><tr><td style=\"white-space:nowrap\">HP:0001948<a name=\"hpo-HP.580001948\"> </a></td><td>Alkalosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003113<a name=\"hpo-HP.580003113\"> </a></td><td>Hypochloremia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003155<a name=\"hpo-HP.580003155\"> </a></td><td>Elevated alkaline phosphatase</td></tr><tr><td style=\"white-space:nowrap\">HP:0003542<a name=\"hpo-HP.580003542\"> </a></td><td>Increased serum pyruvate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000421<a name=\"hpo-HP.580000421\"> </a></td><td>Epistaxis</td></tr><tr><td style=\"white-space:nowrap\">HP:0200136<a name=\"hpo-HP.580200136\"> </a></td><td>Oral-pharyngeal dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000805<a name=\"hpo-HP.580000805\"> </a></td><td>Enuresis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005616<a name=\"hpo-HP.580005616\"> </a></td><td>Accelerated skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002459<a name=\"hpo-HP.580002459\"> </a></td><td>obsolete Dysautonomia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007302<a name=\"hpo-HP.580007302\"> </a></td><td>Bipolar affective disorder</td></tr><tr><td style=\"white-space:nowrap\">HP:0100602<a name=\"hpo-HP.580100602\"> </a></td><td>Preeclampsia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100508<a name=\"hpo-HP.580100508\"> </a></td><td>Abnormality of vitamin metabolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001140<a name=\"hpo-HP.580001140\"> </a></td><td>Limbal dermoid</td></tr><tr><td style=\"white-space:nowrap\">HP:0000143<a name=\"hpo-HP.580000143\"> </a></td><td>Rectovaginal fistula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001746<a name=\"hpo-HP.580001746\"> </a></td><td>Asplenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012715<a name=\"hpo-HP.580012715\"> </a></td><td>Profound hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001748<a name=\"hpo-HP.580001748\"> </a></td><td>Polysplenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003072<a name=\"hpo-HP.580003072\"> </a></td><td>Hypercalcemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002905<a name=\"hpo-HP.580002905\"> </a></td><td>Hyperphosphatemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002901<a name=\"hpo-HP.580002901\"> </a></td><td>Hypocalcemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001367<a name=\"hpo-HP.580001367\"> </a></td><td>Abnormal joint morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0010562<a name=\"hpo-HP.580010562\"> </a></td><td>Keloids</td></tr><tr><td style=\"white-space:nowrap\">HP:0004430<a name=\"hpo-HP.580004430\"> </a></td><td>Severe combined immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000003<a name=\"hpo-HP.580000003\"> </a></td><td>Multicystic kidney dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010980<a name=\"hpo-HP.580010980\"> </a></td><td>Hyperlipoproteinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002155<a name=\"hpo-HP.580002155\"> </a></td><td>Hypertriglyceridemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000520<a name=\"hpo-HP.580000520\"> </a></td><td>Proptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000180<a name=\"hpo-HP.580000180\"> </a></td><td>Lobulated tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0005486<a name=\"hpo-HP.580005486\"> </a></td><td>Small fontanelle</td></tr><tr><td style=\"white-space:nowrap\">HP:0000891<a name=\"hpo-HP.580000891\"> </a></td><td>Cervical ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002557<a name=\"hpo-HP.580002557\"> </a></td><td>Hypoplastic nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0009112<a name=\"hpo-HP.580009112\"> </a></td><td>Aplasia of the left hemidiaphragm</td></tr><tr><td style=\"white-space:nowrap\">HP:0001719<a name=\"hpo-HP.580001719\"> </a></td><td>Double outlet right ventricle</td></tr><tr><td style=\"white-space:nowrap\">HP:0001682<a name=\"hpo-HP.580001682\"> </a></td><td>Subvalvular aortic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001667<a name=\"hpo-HP.580001667\"> </a></td><td>Right ventricular hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002101<a name=\"hpo-HP.580002101\"> </a></td><td>Abnormal lung lobation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002202<a name=\"hpo-HP.580002202\"> </a></td><td>Pleural effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002566<a name=\"hpo-HP.580002566\"> </a></td><td>Intestinal malrotation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004510<a name=\"hpo-HP.580004510\"> </a></td><td>Pancreatic islet-cell hyperplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001747<a name=\"hpo-HP.580001747\"> </a></td><td>Accessory spleen</td></tr><tr><td style=\"white-space:nowrap\">HP:0002181<a name=\"hpo-HP.580002181\"> </a></td><td>Cerebral edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000967<a name=\"hpo-HP.580000967\"> </a></td><td>Petechiae</td></tr><tr><td style=\"white-space:nowrap\">HP:0009702<a name=\"hpo-HP.580009702\"> </a></td><td>Carpal synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000927<a name=\"hpo-HP.580000927\"> </a></td><td>Abnormality of skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004348<a name=\"hpo-HP.580004348\"> </a></td><td>Abnormality of bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0003019<a name=\"hpo-HP.580003019\"> </a></td><td>Abnormality of the wrist</td></tr><tr><td style=\"white-space:nowrap\">HP:0003063<a name=\"hpo-HP.580003063\"> </a></td><td>Abnormality of the humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001059<a name=\"hpo-HP.580001059\"> </a></td><td>Pterygium</td></tr><tr><td style=\"white-space:nowrap\">HP:0001528<a name=\"hpo-HP.580001528\"> </a></td><td>Hemihypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011228<a name=\"hpo-HP.580011228\"> </a></td><td>Horizontal eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000766<a name=\"hpo-HP.580000766\"> </a></td><td>Abnormality of the sternum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001254<a name=\"hpo-HP.580001254\"> </a></td><td>Lethargy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002360<a name=\"hpo-HP.580002360\"> </a></td><td>Sleep disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0001063<a name=\"hpo-HP.580001063\"> </a></td><td>Acrocyanosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001769<a name=\"hpo-HP.580001769\"> </a></td><td>Broad foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0010280<a name=\"hpo-HP.580010280\"> </a></td><td>Stomatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001288<a name=\"hpo-HP.580001288\"> </a></td><td>Gait disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0008330<a name=\"hpo-HP.580008330\"> </a></td><td>Reduced von Willebrand factor activity</td></tr><tr><td style=\"white-space:nowrap\">HP:0001954<a name=\"hpo-HP.580001954\"> </a></td><td>Recurrent fever</td></tr><tr><td style=\"white-space:nowrap\">HP:0004311<a name=\"hpo-HP.580004311\"> </a></td><td>Abnormal macrophage morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012539<a name=\"hpo-HP.580012539\"> </a></td><td>Non-Hodgkin lymphoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0002074<a name=\"hpo-HP.580002074\"> </a></td><td>Increased neuronal autofluorescent lipopigment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002973<a name=\"hpo-HP.580002973\"> </a></td><td>Abnormality of the forearm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003203<a name=\"hpo-HP.580003203\"> </a></td><td>Impaired oxidative burst</td></tr><tr><td style=\"white-space:nowrap\">HP:0003027<a name=\"hpo-HP.580003027\"> </a></td><td>Mesomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002754<a name=\"hpo-HP.580002754\"> </a></td><td>Osteomyelitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004431<a name=\"hpo-HP.580004431\"> </a></td><td>Complement deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0001258<a name=\"hpo-HP.580001258\"> </a></td><td>Spastic paraplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012811<a name=\"hpo-HP.580012811\"> </a></td><td>Wide nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0011832<a name=\"hpo-HP.580011832\"> </a></td><td>Narrow nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000288<a name=\"hpo-HP.580000288\"> </a></td><td>Abnormality of the philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002357<a name=\"hpo-HP.580002357\"> </a></td><td>Dysphasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000871<a name=\"hpo-HP.580000871\"> </a></td><td>Panhypopituitarism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000233<a name=\"hpo-HP.580000233\"> </a></td><td>Thin vermilion border</td></tr><tr><td style=\"white-space:nowrap\">HP:0003281<a name=\"hpo-HP.580003281\"> </a></td><td>Increased serum ferritin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010752<a name=\"hpo-HP.580010752\"> </a></td><td>Cleft mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000437<a name=\"hpo-HP.580000437\"> </a></td><td>Depressed nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000453<a name=\"hpo-HP.580000453\"> </a></td><td>Choanal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000863<a name=\"hpo-HP.580000863\"> </a></td><td>Central diabetes insipidus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000058<a name=\"hpo-HP.580000058\"> </a></td><td>Abnormality of the labia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007418<a name=\"hpo-HP.580007418\"> </a></td><td>Alopecia totalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100765<a name=\"hpo-HP.580100765\"> </a></td><td>Abnormality of the tonsils</td></tr><tr><td style=\"white-space:nowrap\">HP:0100747<a name=\"hpo-HP.580100747\"> </a></td><td>Macrodactyly of toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002109<a name=\"hpo-HP.580002109\"> </a></td><td>obsolete Abnormality of the bronchi</td></tr><tr><td style=\"white-space:nowrap\">HP:0011950<a name=\"hpo-HP.580011950\"> </a></td><td>Bronchiolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002850<a name=\"hpo-HP.580002850\"> </a></td><td>Decreased circulating total IgM</td></tr><tr><td style=\"white-space:nowrap\">HP:0001395<a name=\"hpo-HP.580001395\"> </a></td><td>Hepatic fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010701<a name=\"hpo-HP.580010701\"> </a></td><td>Abnormal immunoglobulin level</td></tr><tr><td style=\"white-space:nowrap\">HP:0009928<a name=\"hpo-HP.580009928\"> </a></td><td>Thick nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0010807<a name=\"hpo-HP.580010807\"> </a></td><td>Open bite</td></tr><tr><td style=\"white-space:nowrap\">HP:0002126<a name=\"hpo-HP.580002126\"> </a></td><td>Polymicrogyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002900<a name=\"hpo-HP.580002900\"> </a></td><td>Hypokalemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000155<a name=\"hpo-HP.580000155\"> </a></td><td>Oral ulcer</td></tr><tr><td style=\"white-space:nowrap\">HP:0000135<a name=\"hpo-HP.580000135\"> </a></td><td>Hypogonadism</td></tr><tr><td style=\"white-space:nowrap\">HP:0100783<a name=\"hpo-HP.580100783\"> </a></td><td>Breast aplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000336<a name=\"hpo-HP.580000336\"> </a></td><td>Prominent supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0010557<a name=\"hpo-HP.580010557\"> </a></td><td>Overlapping fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0005100<a name=\"hpo-HP.580005100\"> </a></td><td>Premature birth following premature rupture of fetal membranes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002594<a name=\"hpo-HP.580002594\"> </a></td><td>Pancreatic hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010109<a name=\"hpo-HP.580010109\"> </a></td><td>Short hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0002334<a name=\"hpo-HP.580002334\"> </a></td><td>Abnormality of the cerebellar vermis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003326<a name=\"hpo-HP.580003326\"> </a></td><td>Myalgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001645<a name=\"hpo-HP.580001645\"> </a></td><td>Sudden cardiac death</td></tr><tr><td style=\"white-space:nowrap\">HP:0001612<a name=\"hpo-HP.580001612\"> </a></td><td>Weak cry</td></tr><tr><td style=\"white-space:nowrap\">HP:0001618<a name=\"hpo-HP.580001618\"> </a></td><td>Dysphonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001336<a name=\"hpo-HP.580001336\"> </a></td><td>Myoclonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001283<a name=\"hpo-HP.580001283\"> </a></td><td>Bulbar palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002080<a name=\"hpo-HP.580002080\"> </a></td><td>Intention tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002174<a name=\"hpo-HP.580002174\"> </a></td><td>Postural tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002064<a name=\"hpo-HP.580002064\"> </a></td><td>Spastic gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0009800<a name=\"hpo-HP.580009800\"> </a></td><td>Maternal diabetes</td></tr><tr><td style=\"white-space:nowrap\">HP:0001662<a name=\"hpo-HP.580001662\"> </a></td><td>Bradycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006595<a name=\"hpo-HP.580006595\"> </a></td><td>Scapulohumeral synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005815<a name=\"hpo-HP.580005815\"> </a></td><td>Supernumerary ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000307<a name=\"hpo-HP.580000307\"> </a></td><td>Pointed chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0012371<a name=\"hpo-HP.580012371\"> </a></td><td>Hyperplasia of midface</td></tr><tr><td style=\"white-space:nowrap\">HP:0002643<a name=\"hpo-HP.580002643\"> </a></td><td>Neonatal respiratory distress</td></tr><tr><td style=\"white-space:nowrap\">HP:0002093<a name=\"hpo-HP.580002093\"> </a></td><td>Respiratory insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0010310<a name=\"hpo-HP.580010310\"> </a></td><td>Chylothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0006376<a name=\"hpo-HP.580006376\"> </a></td><td>Limited elbow flexion</td></tr><tr><td style=\"white-space:nowrap\">HP:0006467<a name=\"hpo-HP.580006467\"> </a></td><td>Limited shoulder movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010505<a name=\"hpo-HP.580010505\"> </a></td><td>Limitation of movement at ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0010501<a name=\"hpo-HP.580010501\"> </a></td><td>Limitation of knee mobility</td></tr><tr><td style=\"white-space:nowrap\">HP:0009896<a name=\"hpo-HP.580009896\"> </a></td><td>Abnormality of the antitragus</td></tr><tr><td style=\"white-space:nowrap\">HP:0004404<a name=\"hpo-HP.580004404\"> </a></td><td>Abnormal nipple morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011957<a name=\"hpo-HP.580011957\"> </a></td><td>Abnormal pectoral muscle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000777<a name=\"hpo-HP.580000777\"> </a></td><td>Abnormality of the thymus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000418<a name=\"hpo-HP.580000418\"> </a></td><td>Narrow nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0001572<a name=\"hpo-HP.580001572\"> </a></td><td>Macrodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002967<a name=\"hpo-HP.580002967\"> </a></td><td>Cubitus valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000988<a name=\"hpo-HP.580000988\"> </a></td><td>Skin rash</td></tr><tr><td style=\"white-space:nowrap\">HP:0009733<a name=\"hpo-HP.580009733\"> </a></td><td>Glioma</td></tr><tr><td style=\"white-space:nowrap\">HP:0012452<a name=\"hpo-HP.580012452\"> </a></td><td>Restless legs</td></tr><tr><td style=\"white-space:nowrap\">HP:0100031<a name=\"hpo-HP.580100031\"> </a></td><td>Neoplasm of the thyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0030127<a name=\"hpo-HP.580030127\"> </a></td><td>Endometriosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000123<a name=\"hpo-HP.580000123\"> </a></td><td>Nephritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001974<a name=\"hpo-HP.580001974\"> </a></td><td>Leukocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010976<a name=\"hpo-HP.580010976\"> </a></td><td>B lymphocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000010<a name=\"hpo-HP.580000010\"> </a></td><td>Recurrent urinary tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0100807<a name=\"hpo-HP.580100807\"> </a></td><td>Long fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0000653<a name=\"hpo-HP.580000653\"> </a></td><td>Sparse eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0000171<a name=\"hpo-HP.580000171\"> </a></td><td>Microglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002575<a name=\"hpo-HP.580002575\"> </a></td><td>Tracheoesophageal fistula</td></tr><tr><td style=\"white-space:nowrap\">HP:0009933<a name=\"hpo-HP.580009933\"> </a></td><td>Narrow naris</td></tr><tr><td style=\"white-space:nowrap\">HP:0000883<a name=\"hpo-HP.580000883\"> </a></td><td>Thin ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000121<a name=\"hpo-HP.580000121\"> </a></td><td>Nephrocalcinosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001349<a name=\"hpo-HP.580001349\"> </a></td><td>Facial diplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012037<a name=\"hpo-HP.580012037\"> </a></td><td>Pectoralis amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100560<a name=\"hpo-HP.580100560\"> </a></td><td>Upper limb asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0005684<a name=\"hpo-HP.580005684\"> </a></td><td>Distal arthrogryposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010722<a name=\"hpo-HP.580010722\"> </a></td><td>Asymmetry of the ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0009380<a name=\"hpo-HP.580009380\"> </a></td><td>Aplasia of the fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0001657<a name=\"hpo-HP.580001657\"> </a></td><td>Prolonged QT interval</td></tr><tr><td style=\"white-space:nowrap\">HP:0002040<a name=\"hpo-HP.580002040\"> </a></td><td>Esophageal varix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000613<a name=\"hpo-HP.580000613\"> </a></td><td>Photophobia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000561<a name=\"hpo-HP.580000561\"> </a></td><td>Absent eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002223<a name=\"hpo-HP.580002223\"> </a></td><td>Absent eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0002591<a name=\"hpo-HP.580002591\"> </a></td><td>Polyphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002373<a name=\"hpo-HP.580002373\"> </a></td><td>Febrile seizure (within the age range of 3 months to 6 years)</td></tr><tr><td style=\"white-space:nowrap\">HP:0002419<a name=\"hpo-HP.580002419\"> </a></td><td>Molar tooth sign on MRI</td></tr><tr><td style=\"white-space:nowrap\">HP:0001010<a name=\"hpo-HP.580001010\"> </a></td><td>Hypopigmentation of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0005772<a name=\"hpo-HP.580005772\"> </a></td><td>Aplasia/Hypoplasia of the tibia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002211<a name=\"hpo-HP.580002211\"> </a></td><td>White forelock</td></tr><tr><td style=\"white-space:nowrap\">HP:0007126<a name=\"hpo-HP.580007126\"> </a></td><td>Proximal amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003798<a name=\"hpo-HP.580003798\"> </a></td><td>Nemaline bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0006533<a name=\"hpo-HP.580006533\"> </a></td><td>Bronchodysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003391<a name=\"hpo-HP.580003391\"> </a></td><td>Gowers sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0000771<a name=\"hpo-HP.580000771\"> </a></td><td>Gynecomastia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100785<a name=\"hpo-HP.580100785\"> </a></td><td>Insomnia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010529<a name=\"hpo-HP.580010529\"> </a></td><td>Echolalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000363<a name=\"hpo-HP.580000363\"> </a></td><td>Abnormality of earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002612<a name=\"hpo-HP.580002612\"> </a></td><td>Congenital hepatic fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006721<a name=\"hpo-HP.580006721\"> </a></td><td>Acute lymphoblastic leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001958<a name=\"hpo-HP.580001958\"> </a></td><td>Nonketotic hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003457<a name=\"hpo-HP.580003457\"> </a></td><td>EMG abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0010636<a name=\"hpo-HP.580010636\"> </a></td><td>Schizencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005266<a name=\"hpo-HP.580005266\"> </a></td><td>Intestinal polyp</td></tr><tr><td style=\"white-space:nowrap\">HP:0200063<a name=\"hpo-HP.580200063\"> </a></td><td>Colorectal polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001762<a name=\"hpo-HP.580001762\"> </a></td><td>Talipes equinovarus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000056<a name=\"hpo-HP.580000056\"> </a></td><td>Abnormality of the clitoris</td></tr><tr><td style=\"white-space:nowrap\">HP:0008655<a name=\"hpo-HP.580008655\"> </a></td><td>Aplasia/Hypoplasia of the fallopian tube</td></tr><tr><td style=\"white-space:nowrap\">HP:0002072<a name=\"hpo-HP.580002072\"> </a></td><td>Chorea</td></tr><tr><td style=\"white-space:nowrap\">HP:0008734<a name=\"hpo-HP.580008734\"> </a></td><td>Decreased testicular size</td></tr><tr><td style=\"white-space:nowrap\">HP:0002136<a name=\"hpo-HP.580002136\"> </a></td><td>Broad-based gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0010958<a name=\"hpo-HP.580010958\"> </a></td><td>Bilateral renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002510<a name=\"hpo-HP.580002510\"> </a></td><td>Spastic tetraplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003234<a name=\"hpo-HP.580003234\"> </a></td><td>Decreased plasma carnitine</td></tr><tr><td style=\"white-space:nowrap\">HP:0000720<a name=\"hpo-HP.580000720\"> </a></td><td>Mood swings</td></tr><tr><td style=\"white-space:nowrap\">HP:0012638<a name=\"hpo-HP.580012638\"> </a></td><td>Abnormal nervous system physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002803<a name=\"hpo-HP.580002803\"> </a></td><td>Congenital contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0000152<a name=\"hpo-HP.580000152\"> </a></td><td>Abnormality of head or neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0004377<a name=\"hpo-HP.580004377\"> </a></td><td>Hematological neoplasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0100006<a name=\"hpo-HP.580100006\"> </a></td><td>Neoplasm of the central nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0012759<a name=\"hpo-HP.580012759\"> </a></td><td>Neurodevelopmental abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0011805<a name=\"hpo-HP.580011805\"> </a></td><td>Abnormal skeletal muscle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003634<a name=\"hpo-HP.580003634\"> </a></td><td>Amyoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001507<a name=\"hpo-HP.580001507\"> </a></td><td>Growth abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001939<a name=\"hpo-HP.580001939\"> </a></td><td>Abnormality of metabolism/homeostasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011013<a name=\"hpo-HP.580011013\"> </a></td><td>Abnormal circulating carbohydrate concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0410008<a name=\"hpo-HP.580410008\"> </a></td><td>Abnormality of the peripheral nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0200134<a name=\"hpo-HP.580200134\"> </a></td><td>Epileptic encephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001881<a name=\"hpo-HP.580001881\"> </a></td><td>Abnormal leukocyte morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0005549<a name=\"hpo-HP.580005549\"> </a></td><td>obsolete Congenital neutropenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004439<a name=\"hpo-HP.580004439\"> </a></td><td>Craniofacial dysostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012443<a name=\"hpo-HP.580012443\"> </a></td><td>Abnormality of brain morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000202<a name=\"hpo-HP.580000202\"> </a></td><td>Oral cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0011842<a name=\"hpo-HP.580011842\"> </a></td><td>Abnormality of skeletal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003808<a name=\"hpo-HP.580003808\"> </a></td><td>Abnormal muscle tone</td></tr><tr><td style=\"white-space:nowrap\">HP:0001574<a name=\"hpo-HP.580001574\"> </a></td><td>Abnormality of the integument</td></tr><tr><td style=\"white-space:nowrap\">HP:0030056<a name=\"hpo-HP.580030056\"> </a></td><td>Uncombable hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0003549<a name=\"hpo-HP.580003549\"> </a></td><td>Abnormality of connective tissue</td></tr><tr><td style=\"white-space:nowrap\">HP:0030875<a name=\"hpo-HP.580030875\"> </a></td><td>Abnormality of pulmonary circulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000118<a name=\"hpo-HP.580000118\"> </a></td><td>Phenotypic abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0012469<a name=\"hpo-HP.580012469\"> </a></td><td>Infantile spasms</td></tr><tr><td style=\"white-space:nowrap\">HP:0032894<a name=\"hpo-HP.580032894\"> </a></td><td>Seizure precipitated by febrile infection</td></tr><tr><td style=\"white-space:nowrap\">HP:0100661<a name=\"hpo-HP.580100661\"> </a></td><td>Trigeminal neuralgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012207<a name=\"hpo-HP.580012207\"> </a></td><td>Reduced sperm motility</td></tr><tr><td style=\"white-space:nowrap\">HP:0000798<a name=\"hpo-HP.580000798\"> </a></td><td>Oligospermia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012864<a name=\"hpo-HP.580012864\"> </a></td><td>Abnormal sperm morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008232<a name=\"hpo-HP.580008232\"> </a></td><td>Elevated circulating follicle stimulating hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0040306<a name=\"hpo-HP.580040306\"> </a></td><td>Decreased male libido</td></tr><tr><td style=\"white-space:nowrap\">HP:0012208<a name=\"hpo-HP.580012208\"> </a></td><td>Immotile sperm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000027<a name=\"hpo-HP.580000027\"> </a></td><td>Azoospermia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000870<a name=\"hpo-HP.580000870\"> </a></td><td>Increased circulating prolactin concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0008187<a name=\"hpo-HP.580008187\"> </a></td><td>Absence of secondary sex characteristics</td></tr><tr><td style=\"white-space:nowrap\">HP:0010469<a name=\"hpo-HP.580010469\"> </a></td><td>Absent testis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011969<a name=\"hpo-HP.580011969\"> </a></td><td>Elevated circulating luteinizing hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0040171<a name=\"hpo-HP.580040171\"> </a></td><td>Decreased serum testosterone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0003251<a name=\"hpo-HP.580003251\"> </a></td><td>Male infertility</td></tr><tr><td style=\"white-space:nowrap\">HP:0009804<a name=\"hpo-HP.580009804\"> </a></td><td>Reduced number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000548<a name=\"hpo-HP.580000548\"> </a></td><td>Cone/cone-rod dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000546<a name=\"hpo-HP.580000546\"> </a></td><td>Retinal degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0008002<a name=\"hpo-HP.580008002\"> </a></td><td>Abnormality of macular pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000608<a name=\"hpo-HP.580000608\"> </a></td><td>Macular degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0030611<a name=\"hpo-HP.580030611\"> </a></td><td>Retinal pigment epithelial loss on macular OCT</td></tr><tr><td style=\"white-space:nowrap\">HP:0001135<a name=\"hpo-HP.580001135\"> </a></td><td>Chorioretinal dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030468<a name=\"hpo-HP.580030468\"> </a></td><td>Abnormal multifocal electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:00030532<a name=\"hpo-HP.5800030532\"> </a></td><td>Visual acuity test abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0007401<a name=\"hpo-HP.580007401\"> </a></td><td>Macular atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030466<a name=\"hpo-HP.580030466\"> </a></td><td>Abnormal full-field electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:007737<a name=\"hpo-HP.58007737\"> </a></td><td>Bone spicule pigmentation of the retina</td></tr><tr><td style=\"white-space:nowrap\">HP:0011342<a name=\"hpo-HP.580011342\"> </a></td><td>Mild global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0030610<a name=\"hpo-HP.580030610\"> </a></td><td>Photoreceptor outer segment loss on macular OCT</td></tr><tr><td style=\"white-space:nowrap\">HP:0007722<a name=\"hpo-HP.580007722\"> </a></td><td>Retinal pigment epithelial atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030493<a name=\"hpo-HP.580030493\"> </a></td><td>Abnormality of foveal pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0007843<a name=\"hpo-HP.580007843\"> </a></td><td>Attenuation of retinal blood vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0007754<a name=\"hpo-HP.580007754\"> </a></td><td>Macular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011509<a name=\"hpo-HP.580011509\"> </a></td><td>Macular hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0008527<a name=\"hpo-HP.580008527\"> </a></td><td>Congenital sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0200070<a name=\"hpo-HP.580200070\"> </a></td><td>Peripheral retinal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0007793<a name=\"hpo-HP.580007793\"> </a></td><td>Granular macular appearance</td></tr><tr><td style=\"white-space:nowrap\">HP:0007987<a name=\"hpo-HP.580007987\"> </a></td><td>Progressive visual field defects</td></tr><tr><td style=\"white-space:nowrap\">HP:0100817<a name=\"hpo-HP.580100817\"> </a></td><td>Renovascular hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0007868<a name=\"hpo-HP.580007868\"> </a></td><td>obsolete Age-related macular degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0030527<a name=\"hpo-HP.580030527\"> </a></td><td>Very severe constriction of peripheral visual field</td></tr><tr><td style=\"white-space:nowrap\">HP:0030551<a name=\"hpo-HP.580030551\"> </a></td><td>Visual acuity light perception with projection</td></tr><tr><td style=\"white-space:nowrap\">HP:0011505<a name=\"hpo-HP.580011505\"> </a></td><td>Cystoid macular edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0010442<a name=\"hpo-HP.580010442\"> </a></td><td>Polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0007642<a name=\"hpo-HP.580007642\"> </a></td><td>Congenital stationary night blindness</td></tr><tr><td style=\"white-space:nowrap\">HP:0009073<a name=\"hpo-HP.580009073\"> </a></td><td>Progressive proximal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003741<a name=\"hpo-HP.580003741\"> </a></td><td>Congenital muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100299<a name=\"hpo-HP.580100299\"> </a></td><td>Muscle fiber inclusion bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0003540<a name=\"hpo-HP.580003540\"> </a></td><td>Impaired platelet aggregation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010489<a name=\"hpo-HP.580010489\"> </a></td><td>Absent palmar crease</td></tr><tr><td style=\"white-space:nowrap\">HP:0009824<a name=\"hpo-HP.580009824\"> </a></td><td>Upper limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002395<a name=\"hpo-HP.580002395\"> </a></td><td>Lower limb hyperreflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001138<a name=\"hpo-HP.580001138\"> </a></td><td>Optic neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0007103<a name=\"hpo-HP.580007103\"> </a></td><td>Hypointensity of cerebral white matter on MRI</td></tr><tr><td style=\"white-space:nowrap\">HP:0003458<a name=\"hpo-HP.580003458\"> </a></td><td>EMG: myopathic abnormalities</td></tr><tr><td style=\"white-space:nowrap\">HP:0002987<a name=\"hpo-HP.580002987\"> </a></td><td>Elbow flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0006466<a name=\"hpo-HP.580006466\"> </a></td><td>Ankle flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0008458<a name=\"hpo-HP.580008458\"> </a></td><td>Progressive congenital scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000473<a name=\"hpo-HP.580000473\"> </a></td><td>Torticollis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011800<a name=\"hpo-HP.580011800\"> </a></td><td>Midface retrusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000597<a name=\"hpo-HP.580000597\"> </a></td><td>Ophthalmoparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005853<a name=\"hpo-HP.580005853\"> </a></td><td>Congenital foot contraction deformities</td></tr><tr><td style=\"white-space:nowrap\">HP:0007002<a name=\"hpo-HP.580007002\"> </a></td><td>Motor axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003327<a name=\"hpo-HP.580003327\"> </a></td><td>Axial muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003306<a name=\"hpo-HP.580003306\"> </a></td><td>Spinal rigidity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002068<a name=\"hpo-HP.580002068\"> </a></td><td>Neuromuscular dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001002<a name=\"hpo-HP.580001002\"> </a></td><td>obsolete Decreased subcutaneous fat</td></tr><tr><td style=\"white-space:nowrap\">HP:0002880<a name=\"hpo-HP.580002880\"> </a></td><td>obsolete Respiratory difficulties</td></tr><tr><td style=\"white-space:nowrap\">HP:0006829<a name=\"hpo-HP.580006829\"> </a></td><td>Severe muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011448<a name=\"hpo-HP.580011448\"> </a></td><td>Ankle clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0003487<a name=\"hpo-HP.580003487\"> </a></td><td>Babinski sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0002378<a name=\"hpo-HP.580002378\"> </a></td><td>Hand tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002747<a name=\"hpo-HP.580002747\"> </a></td><td>Respiratory insufficiency due to muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002579<a name=\"hpo-HP.580002579\"> </a></td><td>Gastrointestinal dysmotility</td></tr><tr><td style=\"white-space:nowrap\">HP:0001041<a name=\"hpo-HP.580001041\"> </a></td><td>Facial erythema</td></tr><tr><td style=\"white-space:nowrap\">HP:0040180<a name=\"hpo-HP.580040180\"> </a></td><td>Hyperkeratosis pilaris</td></tr><tr><td style=\"white-space:nowrap\">HP:0001382<a name=\"hpo-HP.580001382\"> </a></td><td>Joint hypermobility</td></tr><tr><td style=\"white-space:nowrap\">HP:0003722<a name=\"hpo-HP.580003722\"> </a></td><td>Neck flexor weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003323<a name=\"hpo-HP.580003323\"> </a></td><td>Progressive muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002380<a name=\"hpo-HP.580002380\"> </a></td><td>Fasciculations</td></tr><tr><td style=\"white-space:nowrap\">HP:0012785<a name=\"hpo-HP.580012785\"> </a></td><td>Flexion contracture of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0007936<a name=\"hpo-HP.580007936\"> </a></td><td>Restrictive external ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030319<a name=\"hpo-HP.580030319\"> </a></td><td>Weakness of facial musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0008936<a name=\"hpo-HP.580008936\"> </a></td><td>Muscular hypotonia of the trunk</td></tr><tr><td style=\"white-space:nowrap\">HP:0030230<a name=\"hpo-HP.580030230\"> </a></td><td>Central core regions in muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0011471<a name=\"hpo-HP.580011471\"> </a></td><td>Gastrostomy tube feeding in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001290<a name=\"hpo-HP.580001290\"> </a></td><td>Generalized hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002421<a name=\"hpo-HP.580002421\"> </a></td><td>Poor head control</td></tr><tr><td style=\"white-space:nowrap\">HP:0010301<a name=\"hpo-HP.580010301\"> </a></td><td>Spinal dysraphism</td></tr><tr><td style=\"white-space:nowrap\">HP:0004303<a name=\"hpo-HP.580004303\"> </a></td><td>Abnormal muscle fiber morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009046<a name=\"hpo-HP.580009046\"> </a></td><td>Difficulty running</td></tr><tr><td style=\"white-space:nowrap\">HP:0003715<a name=\"hpo-HP.580003715\"> </a></td><td>Myofibrillar myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000467<a name=\"hpo-HP.580000467\"> </a></td><td>Neck muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001999<a name=\"hpo-HP.580001999\"> </a></td><td>Abnormal facial shape</td></tr><tr><td style=\"white-space:nowrap\">HP:0002751<a name=\"hpo-HP.580002751\"> </a></td><td>Kyphoscoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030223<a name=\"hpo-HP.580030223\"> </a></td><td>Perseveration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002344<a name=\"hpo-HP.580002344\"> </a></td><td>Progressive neurologic deterioration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002522<a name=\"hpo-HP.580002522\"> </a></td><td>Areflexia of lower limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0003805<a name=\"hpo-HP.580003805\"> </a></td><td>Rimmed vacuoles</td></tr><tr><td style=\"white-space:nowrap\">HP:0005781<a name=\"hpo-HP.580005781\"> </a></td><td>Contractures of the large joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0040083<a name=\"hpo-HP.580040083\"> </a></td><td>Toe walking</td></tr><tr><td style=\"white-space:nowrap\">HP:0003749<a name=\"hpo-HP.580003749\"> </a></td><td>Pelvic girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0012444<a name=\"hpo-HP.580012444\"> </a></td><td>Brain atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003738<a name=\"hpo-HP.580003738\"> </a></td><td>Exercise-induced myalgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003756<a name=\"hpo-HP.580003756\"> </a></td><td>Skeletal myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002492<a name=\"hpo-HP.580002492\"> </a></td><td>Morphological abnormality of the corticospinal tract</td></tr><tr><td style=\"white-space:nowrap\">HP:0100302<a name=\"hpo-HP.580100302\"> </a></td><td>Muscle fiber tubuloreticular inclusions</td></tr><tr><td style=\"white-space:nowrap\">HP:0006817<a name=\"hpo-HP.580006817\"> </a></td><td>Aplasia/Hypoplasia of the cerebellar vermis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003473<a name=\"hpo-HP.580003473\"> </a></td><td>Fatigable weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002077<a name=\"hpo-HP.580002077\"> </a></td><td>Migraine with aura</td></tr><tr><td style=\"white-space:nowrap\">HP:0100559<a name=\"hpo-HP.580100559\"> </a></td><td>Lower limb asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0002079<a name=\"hpo-HP.580002079\"> </a></td><td>Hypoplasia of the corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002804<a name=\"hpo-HP.580002804\"> </a></td><td>Arthrogryposis multiplex congenita</td></tr><tr><td style=\"white-space:nowrap\">HP:0011623<a name=\"hpo-HP.580011623\"> </a></td><td>Muscular ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002191<a name=\"hpo-HP.580002191\"> </a></td><td>Progressive spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003390<a name=\"hpo-HP.580003390\"> </a></td><td>Sensory axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006986<a name=\"hpo-HP.580006986\"> </a></td><td>Upper limb spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002464<a name=\"hpo-HP.580002464\"> </a></td><td>Spastic dysarthria</td></tr><tr><td style=\"white-space:nowrap\">HP:0001308<a name=\"hpo-HP.580001308\"> </a></td><td>Tongue fasciculations</td></tr><tr><td style=\"white-space:nowrap\">HP:0007010<a name=\"hpo-HP.580007010\"> </a></td><td>Poor fine motor coordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0003737<a name=\"hpo-HP.580003737\"> </a></td><td>Mitochondrial myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0008012<a name=\"hpo-HP.580008012\"> </a></td><td>obsolete Congenital myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008872<a name=\"hpo-HP.580008872\"> </a></td><td>Feeding difficulties in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005750<a name=\"hpo-HP.580005750\"> </a></td><td>Contractures of the joints of the lower limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0009067<a name=\"hpo-HP.580009067\"> </a></td><td>Progressive spinal muscular atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001623<a name=\"hpo-HP.580001623\"> </a></td><td>Breech presentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001374<a name=\"hpo-HP.580001374\"> </a></td><td>Congenital hip dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002359<a name=\"hpo-HP.580002359\"> </a></td><td>Frequent falls</td></tr><tr><td style=\"white-space:nowrap\">HP:0003803<a name=\"hpo-HP.580003803\"> </a></td><td>Type 1 muscle fiber predominance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011410<a name=\"hpo-HP.580011410\"> </a></td><td>Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0008947<a name=\"hpo-HP.580008947\"> </a></td><td>Infantile muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100501<a name=\"hpo-HP.580100501\"> </a></td><td>Recurrent bronchiolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003789<a name=\"hpo-HP.580003789\"> </a></td><td>Minicore myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000544<a name=\"hpo-HP.580000544\"> </a></td><td>External ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001605<a name=\"hpo-HP.580001605\"> </a></td><td>Vocal cord paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003712<a name=\"hpo-HP.580003712\"> </a></td><td>Skeletal muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0012507<a name=\"hpo-HP.580012507\"> </a></td><td>Weakness of orbicularis oculi muscle</td></tr><tr><td style=\"white-space:nowrap\">HP:0009816<a name=\"hpo-HP.580009816\"> </a></td><td>Lower limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0008935<a name=\"hpo-HP.580008935\"> </a></td><td>Generalized neonatal hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003484<a name=\"hpo-HP.580003484\"> </a></td><td>Upper limb muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0008331<a name=\"hpo-HP.580008331\"> </a></td><td>Elevated creatine kinase after exercise</td></tr><tr><td style=\"white-space:nowrap\">HP:0001315<a name=\"hpo-HP.580001315\"> </a></td><td>Reduced tendon reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0012473<a name=\"hpo-HP.580012473\"> </a></td><td>Tongue atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003273<a name=\"hpo-HP.580003273\"> </a></td><td>Hip contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0006380<a name=\"hpo-HP.580006380\"> </a></td><td>Knee flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0003752<a name=\"hpo-HP.580003752\"> </a></td><td>Episodic flaccid weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0100298<a name=\"hpo-HP.580100298\"> </a></td><td>Motheaten muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0003693<a name=\"hpo-HP.580003693\"> </a></td><td>Distal amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002167<a name=\"hpo-HP.580002167\"> </a></td><td>Neurological speech impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0003388<a name=\"hpo-HP.580003388\"> </a></td><td>Easy fatigability</td></tr><tr><td style=\"white-space:nowrap\">HP:0001348<a name=\"hpo-HP.580001348\"> </a></td><td>Brisk reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0003445<a name=\"hpo-HP.580003445\"> </a></td><td>EMG: neuropathic changes</td></tr><tr><td style=\"white-space:nowrap\">HP:0009063<a name=\"hpo-HP.580009063\"> </a></td><td>Progressive distal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003720<a name=\"hpo-HP.580003720\"> </a></td><td>Generalized muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002493<a name=\"hpo-HP.580002493\"> </a></td><td>Upper motor neuron dysfunction</td></tr><tr><td style=\"white-space:nowrap\">HP:0012448<a name=\"hpo-HP.580012448\"> </a></td><td>Delayed myelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0001338<a name=\"hpo-HP.580001338\"> </a></td><td>Partial agenesis of the corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0006879<a name=\"hpo-HP.580006879\"> </a></td><td>Pontocerebellar atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0200101<a name=\"hpo-HP.580200101\"> </a></td><td>Decreased/absent ankle reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0009020<a name=\"hpo-HP.580009020\"> </a></td><td>Exercise-induced muscle fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002067<a name=\"hpo-HP.580002067\"> </a></td><td>Bradykinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012751<a name=\"hpo-HP.580012751\"> </a></td><td>Abnormal basal ganglia MRI signal intensity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003355<a name=\"hpo-HP.580003355\"> </a></td><td>Aminoaciduria</td></tr><tr><td style=\"white-space:nowrap\">HP:0012450<a name=\"hpo-HP.580012450\"> </a></td><td>Chronic constipation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011834<a name=\"hpo-HP.580011834\"> </a></td><td>Moyamoya phenomenon</td></tr><tr><td style=\"white-space:nowrap\">HP:0001297<a name=\"hpo-HP.580001297\"> </a></td><td>Stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0200049<a name=\"hpo-HP.580200049\"> </a></td><td>Upper limb hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008981<a name=\"hpo-HP.580008981\"> </a></td><td>Calf muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006785<a name=\"hpo-HP.580006785\"> </a></td><td>Limb-girdle muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006957<a name=\"hpo-HP.580006957\"> </a></td><td>Loss of ability to walk</td></tr><tr><td style=\"white-space:nowrap\">HP:0030098<a name=\"hpo-HP.580030098\"> </a></td><td>Reduced muscle dystrophin expression</td></tr><tr><td style=\"white-space:nowrap\">HP:0030115<a name=\"hpo-HP.580030115\"> </a></td><td>Reduced muscle fiber dysferlin</td></tr><tr><td style=\"white-space:nowrap\">HP:0002058<a name=\"hpo-HP.580002058\"> </a></td><td>Myopathic facies</td></tr><tr><td style=\"white-space:nowrap\">HP:0007858<a name=\"hpo-HP.580007858\"> </a></td><td>Chorioretinal lacunae</td></tr><tr><td style=\"white-space:nowrap\">HP:0006657<a name=\"hpo-HP.580006657\"> </a></td><td>Hypoplasia of first ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0007165<a name=\"hpo-HP.580007165\"> </a></td><td>Periventricular heterotopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0009779<a name=\"hpo-HP.580009779\"> </a></td><td>3-4 toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010665<a name=\"hpo-HP.580010665\"> </a></td><td>Bilateral coxa valga</td></tr><tr><td style=\"white-space:nowrap\">HP:0007598<a name=\"hpo-HP.580007598\"> </a></td><td>Bilateral single transverse palmar creases</td></tr><tr><td style=\"white-space:nowrap\">HP:0006101<a name=\"hpo-HP.580006101\"> </a></td><td>Finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010511<a name=\"hpo-HP.580010511\"> </a></td><td>Long toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002370<a name=\"hpo-HP.580002370\"> </a></td><td>Poor coordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0000480<a name=\"hpo-HP.580000480\"> </a></td><td>Retinal coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001770<a name=\"hpo-HP.580001770\"> </a></td><td>Toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010851<a name=\"hpo-HP.580010851\"> </a></td><td>EEG with burst suppression</td></tr><tr><td style=\"white-space:nowrap\">HP:0002791<a name=\"hpo-HP.580002791\"> </a></td><td>Hypoventilation</td></tr><tr><td style=\"white-space:nowrap\">HP:0040075<a name=\"hpo-HP.580040075\"> </a></td><td>Hypopituitarism</td></tr><tr><td style=\"white-space:nowrap\">HP:0012506<a name=\"hpo-HP.580012506\"> </a></td><td>Small pituitary gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000538<a name=\"hpo-HP.580000538\"> </a></td><td>Pseudopapilledema</td></tr><tr><td style=\"white-space:nowrap\">HP:0012717<a name=\"hpo-HP.580012717\"> </a></td><td>Severe conductive hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001370<a name=\"hpo-HP.580001370\"> </a></td><td>Rheumatoid arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000016<a name=\"hpo-HP.580000016\"> </a></td><td>Urinary retention</td></tr><tr><td style=\"white-space:nowrap\">HP:0012537<a name=\"hpo-HP.580012537\"> </a></td><td>Food intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011297<a name=\"hpo-HP.580011297\"> </a></td><td>Abnormal digit morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001273<a name=\"hpo-HP.580001273\"> </a></td><td>Abnormal corpus callosum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0030148<a name=\"hpo-HP.580030148\"> </a></td><td>Heart murmur</td></tr><tr><td style=\"white-space:nowrap\">HP:0045018<a name=\"hpo-HP.580045018\"> </a></td><td>Partial duplication of eyebrows</td></tr><tr><td style=\"white-space:nowrap\">HP:0008998<a name=\"hpo-HP.580008998\"> </a></td><td>Pectoralis hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001707<a name=\"hpo-HP.580001707\"> </a></td><td>Abnormal right ventricle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001540<a name=\"hpo-HP.580001540\"> </a></td><td>Diastasis recti</td></tr><tr><td style=\"white-space:nowrap\">HP:0100693<a name=\"hpo-HP.580100693\"> </a></td><td>Iridodonesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002265<a name=\"hpo-HP.580002265\"> </a></td><td>Large fleshy ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001132<a name=\"hpo-HP.580001132\"> </a></td><td>Lens subluxation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004927<a name=\"hpo-HP.580004927\"> </a></td><td>Pulmonary artery dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005619<a name=\"hpo-HP.580005619\"> </a></td><td>Thoracolumbar kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008619<a name=\"hpo-HP.580008619\"> </a></td><td>Bilateral sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001045<a name=\"hpo-HP.580001045\"> </a></td><td>Vitiligo</td></tr><tr><td style=\"white-space:nowrap\">HP:0009124<a name=\"hpo-HP.580009124\"> </a></td><td>Abnormal adipose tissue morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002979<a name=\"hpo-HP.580002979\"> </a></td><td>Bowing of the legs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000455<a name=\"hpo-HP.580000455\"> </a></td><td>Broad nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001007<a name=\"hpo-HP.580001007\"> </a></td><td>Hirsutism</td></tr><tr><td style=\"white-space:nowrap\">HP:0010314<a name=\"hpo-HP.580010314\"> </a></td><td>Premature thelarche</td></tr><tr><td style=\"white-space:nowrap\">HP:0000075<a name=\"hpo-HP.580000075\"> </a></td><td>Renal duplication</td></tr><tr><td style=\"white-space:nowrap\">HP:0000368<a name=\"hpo-HP.580000368\"> </a></td><td>Low-set, posteriorly rotated ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001052<a name=\"hpo-HP.580001052\"> </a></td><td>Nevus flammeus</td></tr><tr><td style=\"white-space:nowrap\">HP:0200048<a name=\"hpo-HP.580200048\"> </a></td><td>Cyanotic episode</td></tr><tr><td style=\"white-space:nowrap\">HP:0001902<a name=\"hpo-HP.580001902\"> </a></td><td>Giant platelets</td></tr><tr><td style=\"white-space:nowrap\">HP:0030043<a name=\"hpo-HP.580030043\"> </a></td><td>Hip subluxation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002938<a name=\"hpo-HP.580002938\"> </a></td><td>Lumbar hyperlordosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030084<a name=\"hpo-HP.580030084\"> </a></td><td>Clinodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005560<a name=\"hpo-HP.580005560\"> </a></td><td>Imbalanced hemoglobin synthesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001539<a name=\"hpo-HP.580001539\"> </a></td><td>Omphalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0009778<a name=\"hpo-HP.580009778\"> </a></td><td>Short thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002277<a name=\"hpo-HP.580002277\"> </a></td><td>Horner syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0011701<a name=\"hpo-HP.580011701\"> </a></td><td>Multifocal atrial tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005274<a name=\"hpo-HP.580005274\"> </a></td><td>Prominent nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001262<a name=\"hpo-HP.580001262\"> </a></td><td>Excessive daytime somnolence</td></tr><tr><td style=\"white-space:nowrap\">HP:0001285<a name=\"hpo-HP.580001285\"> </a></td><td>Spastic tetraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012171<a name=\"hpo-HP.580012171\"> </a></td><td>Stereotypical hand wringing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002518<a name=\"hpo-HP.580002518\"> </a></td><td>Abnormality of the periventricular white matter</td></tr><tr><td style=\"white-space:nowrap\">HP:0005692<a name=\"hpo-HP.580005692\"> </a></td><td>Joint hyperflexibility</td></tr><tr><td style=\"white-space:nowrap\">HP:0007440<a name=\"hpo-HP.580007440\"> </a></td><td>Generalized hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001805<a name=\"hpo-HP.580001805\"> </a></td><td>Onychogryposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011945<a name=\"hpo-HP.580011945\"> </a></td><td>Bronchiolitis obliterans organizing pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003763<a name=\"hpo-HP.580003763\"> </a></td><td>Bruxism</td></tr><tr><td style=\"white-space:nowrap\">HP:0010500<a name=\"hpo-HP.580010500\"> </a></td><td>Hyperextensibility of the knee</td></tr><tr><td style=\"white-space:nowrap\">HP:0040115<a name=\"hpo-HP.580040115\"> </a></td><td>Abnormality of the Eustachian tube</td></tr><tr><td style=\"white-space:nowrap\">HP:0008751<a name=\"hpo-HP.580008751\"> </a></td><td>Laryngeal cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0000403<a name=\"hpo-HP.580000403\"> </a></td><td>Recurrent otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0001787<a name=\"hpo-HP.580001787\"> </a></td><td>Abnormal delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0002571<a name=\"hpo-HP.580002571\"> </a></td><td>Achalasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002615<a name=\"hpo-HP.580002615\"> </a></td><td>Hypotension</td></tr><tr><td style=\"white-space:nowrap\">HP:0003550<a name=\"hpo-HP.580003550\"> </a></td><td>Predominantly lower limb lymphedema</td></tr><tr><td style=\"white-space:nowrap\">HP:0030363<a name=\"hpo-HP.580030363\"> </a></td><td>Primary Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0001727<a name=\"hpo-HP.580001727\"> </a></td><td>Thromboembolic stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0100603<a name=\"hpo-HP.580100603\"> </a></td><td>Toxemia of pregnancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0010836<a name=\"hpo-HP.580010836\"> </a></td><td>Abnormal circulating copper concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0000356<a name=\"hpo-HP.580000356\"> </a></td><td>Abnormality of the outer ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0002197<a name=\"hpo-HP.580002197\"> </a></td><td>Generalized-onset seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011436<a name=\"hpo-HP.580011436\"> </a></td><td>Abnormal maternal serum screening</td></tr><tr><td style=\"white-space:nowrap\">HP:0003517<a name=\"hpo-HP.580003517\"> </a></td><td>Birth length greater than 97th percentile</td></tr><tr><td style=\"white-space:nowrap\">HP:0003561<a name=\"hpo-HP.580003561\"> </a></td><td>Birth length less than 3rd percentile</td></tr><tr><td style=\"white-space:nowrap\">HP:0012188<a name=\"hpo-HP.580012188\"> </a></td><td>Hyperemesis gravidarum</td></tr><tr><td style=\"white-space:nowrap\">HP:0010519<a name=\"hpo-HP.580010519\"> </a></td><td>Increased fetal movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0030244<a name=\"hpo-HP.580030244\"> </a></td><td>Maternal fever in pregnancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0008071<a name=\"hpo-HP.580008071\"> </a></td><td>Maternal hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0100622<a name=\"hpo-HP.580100622\"> </a></td><td>Maternal seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011438<a name=\"hpo-HP.580011438\"> </a></td><td>Maternal teratogenic exposure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001998<a name=\"hpo-HP.580001998\"> </a></td><td>Neonatal hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0040187<a name=\"hpo-HP.580040187\"> </a></td><td>Neonatal sepsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002033<a name=\"hpo-HP.580002033\"> </a></td><td>Poor suck</td></tr><tr><td style=\"white-space:nowrap\">HP:0006579<a name=\"hpo-HP.580006579\"> </a></td><td>Prolonged neonatal jaundice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001724<a name=\"hpo-HP.580001724\"> </a></td><td>obsolete Aortic dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010621<a name=\"hpo-HP.580010621\"> </a></td><td>Cutaneous syndactyly of toes</td></tr><tr><td style=\"white-space:nowrap\">HP:0001880<a name=\"hpo-HP.580001880\"> </a></td><td>Eosinophilia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000162<a name=\"hpo-HP.580000162\"> </a></td><td>Glossoptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100578<a name=\"hpo-HP.580100578\"> </a></td><td>Lipoatrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002562<a name=\"hpo-HP.580002562\"> </a></td><td>Low-set nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0012893<a name=\"hpo-HP.580012893\"> </a></td><td>Neck muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001027<a name=\"hpo-HP.580001027\"> </a></td><td>Soft, doughy skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0100738<a name=\"hpo-HP.580100738\"> </a></td><td>Abnormal eating behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0007328<a name=\"hpo-HP.580007328\"> </a></td><td>Impaired pain sensation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002878<a name=\"hpo-HP.580002878\"> </a></td><td>Respiratory failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001776<a name=\"hpo-HP.580001776\"> </a></td><td>Bilateral talipes equinovarus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001360<a name=\"hpo-HP.580001360\"> </a></td><td>Holoprosencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001973<a name=\"hpo-HP.580001973\"> </a></td><td>Autoimmune thrombocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100749<a name=\"hpo-HP.580100749\"> </a></td><td>Chest pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0012531<a name=\"hpo-HP.580012531\"> </a></td><td>Pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0007585<a name=\"hpo-HP.580007585\"> </a></td><td>Skin fragility with non-scarring blistering</td></tr><tr><td style=\"white-space:nowrap\">HP:0002108<a name=\"hpo-HP.580002108\"> </a></td><td>Spontaneous pneumothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0006562<a name=\"hpo-HP.580006562\"> </a></td><td>Viral hepatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012647<a name=\"hpo-HP.580012647\"> </a></td><td>Abnormal inflammatory response</td></tr><tr><td style=\"white-space:nowrap\">HP:0012088<a name=\"hpo-HP.580012088\"> </a></td><td>Abnormal urinary odor</td></tr><tr><td style=\"white-space:nowrap\">HP:0011458<a name=\"hpo-HP.580011458\"> </a></td><td>Abdominal symptom</td></tr><tr><td style=\"white-space:nowrap\">HP:0002829<a name=\"hpo-HP.580002829\"> </a></td><td>Arthralgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010783<a name=\"hpo-HP.580010783\"> </a></td><td>Erythema</td></tr><tr><td style=\"white-space:nowrap\">HP:0010307<a name=\"hpo-HP.580010307\"> </a></td><td>Stridor</td></tr><tr><td style=\"white-space:nowrap\">HP:0001269<a name=\"hpo-HP.580001269\"> </a></td><td>Hemiparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006532<a name=\"hpo-HP.580006532\"> </a></td><td>Recurrent pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002580<a name=\"hpo-HP.580002580\"> </a></td><td>Volvulus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012387<a name=\"hpo-HP.580012387\"> </a></td><td>Bronchitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001266<a name=\"hpo-HP.580001266\"> </a></td><td>Choreoathetosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001531<a name=\"hpo-HP.580001531\"> </a></td><td>Failure to thrive in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011470<a name=\"hpo-HP.580011470\"> </a></td><td>Nasogastric tube feeding in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001361<a name=\"hpo-HP.580001361\"> </a></td><td>Nystagmus-induced head nodding</td></tr><tr><td style=\"white-space:nowrap\">HP:0001997<a name=\"hpo-HP.580001997\"> </a></td><td>Gout</td></tr><tr><td style=\"white-space:nowrap\">HP:0000965<a name=\"hpo-HP.580000965\"> </a></td><td>Cutis marmorata</td></tr><tr><td style=\"white-space:nowrap\">HP:0010316<a name=\"hpo-HP.580010316\"> </a></td><td>Ebstein anomaly of the tricuspid valve</td></tr><tr><td style=\"white-space:nowrap\">HP:0010543<a name=\"hpo-HP.580010543\"> </a></td><td>Opsoclonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0007704<a name=\"hpo-HP.580007704\"> </a></td><td>Paroxysmal involuntary eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0030364<a name=\"hpo-HP.580030364\"> </a></td><td>Secondary Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0007738<a name=\"hpo-HP.580007738\"> </a></td><td>Uncontrolled eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0030366<a name=\"hpo-HP.580030366\"> </a></td><td>Delivery by Odon device</td></tr><tr><td style=\"white-space:nowrap\">HP:0011411<a name=\"hpo-HP.580011411\"> </a></td><td>Forceps delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0030369<a name=\"hpo-HP.580030369\"> </a></td><td>Induced vaginal delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0005268<a name=\"hpo-HP.580005268\"> </a></td><td>Spontaneous abortion</td></tr><tr><td style=\"white-space:nowrap\">HP:0030365<a name=\"hpo-HP.580030365\"> </a></td><td>Vaginal birth after Caesarian</td></tr><tr><td style=\"white-space:nowrap\">HP:0011412<a name=\"hpo-HP.580011412\"> </a></td><td>Ventouse delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0002572<a name=\"hpo-HP.580002572\"> </a></td><td>Episodic vomiting</td></tr><tr><td style=\"white-space:nowrap\">HP:0030350<a name=\"hpo-HP.580030350\"> </a></td><td>Erythematous papule</td></tr><tr><td style=\"white-space:nowrap\">HP:0001386<a name=\"hpo-HP.580001386\"> </a></td><td>Joint swelling</td></tr><tr><td style=\"white-space:nowrap\">HP:0000147<a name=\"hpo-HP.580000147\"> </a></td><td>Polycystic ovaries</td></tr><tr><td style=\"white-space:nowrap\">HP:0012412<a name=\"hpo-HP.580012412\"> </a></td><td>Premature adrenarche</td></tr><tr><td style=\"white-space:nowrap\">HP:0004411<a name=\"hpo-HP.580004411\"> </a></td><td>Deviated nasal septum</td></tr><tr><td style=\"white-space:nowrap\">HP:0040183<a name=\"hpo-HP.580040183\"> </a></td><td>Encopresis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100507<a name=\"hpo-HP.580100507\"> </a></td><td>Reduced blood folate concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0007011<a name=\"hpo-HP.580007011\"> </a></td><td>Fourth cranial nerve palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000375<a name=\"hpo-HP.580000375\"> </a></td><td>Abnormal cochlea morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009911<a name=\"hpo-HP.580009911\"> </a></td><td>Abnormal temporal bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000081<a name=\"hpo-HP.580000081\"> </a></td><td>Duplicated collecting system</td></tr><tr><td style=\"white-space:nowrap\">HP:0006894<a name=\"hpo-HP.580006894\"> </a></td><td>Hypoplastic olfactory lobes</td></tr><tr><td style=\"white-space:nowrap\">HP:0011380<a name=\"hpo-HP.580011380\"> </a></td><td>Morphological abnormality of the semicircular canal</td></tr><tr><td style=\"white-space:nowrap\">HP:0000110<a name=\"hpo-HP.580000110\"> </a></td><td>Renal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030025<a name=\"hpo-HP.580030025\"> </a></td><td>Auricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0010044<a name=\"hpo-HP.580010044\"> </a></td><td>Short 4th metacarpal</td></tr><tr><td style=\"white-space:nowrap\">HP:0010047<a name=\"hpo-HP.580010047\"> </a></td><td>Short 5th metacarpal</td></tr><tr><td style=\"white-space:nowrap\">HP:0000201<a name=\"hpo-HP.580000201\"> </a></td><td>Pierre-Robin sequence</td></tr><tr><td style=\"white-space:nowrap\">HP:0100837<a name=\"hpo-HP.580100837\"> </a></td><td>Atrophodermia vermiculata</td></tr><tr><td style=\"white-space:nowrap\">HP:0002673<a name=\"hpo-HP.580002673\"> </a></td><td>Coxa valga</td></tr><tr><td style=\"white-space:nowrap\">HP:0001476<a name=\"hpo-HP.580001476\"> </a></td><td>Delayed closure of the anterior fontanelle</td></tr><tr><td style=\"white-space:nowrap\">HP:0011069<a name=\"hpo-HP.580011069\"> </a></td><td>Increased number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009879<a name=\"hpo-HP.580009879\"> </a></td><td>Simplified gyral pattern</td></tr><tr><td style=\"white-space:nowrap\">HP:0006315<a name=\"hpo-HP.580006315\"> </a></td><td>Single median maxillary incisor</td></tr><tr><td style=\"white-space:nowrap\">HP:0001194<a name=\"hpo-HP.580001194\"> </a></td><td>Abnormalities of placenta or umbilical cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0100767<a name=\"hpo-HP.580100767\"> </a></td><td>Abnormal placenta morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0006543<a name=\"hpo-HP.580006543\"> </a></td><td>Cardiorespiratory arrest</td></tr><tr><td style=\"white-space:nowrap\">HP:0003074<a name=\"hpo-HP.580003074\"> </a></td><td>Hyperglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000842<a name=\"hpo-HP.580000842\"> </a></td><td>Hyperinsulinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011951<a name=\"hpo-HP.580011951\"> </a></td><td>Aspiration pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006528<a name=\"hpo-HP.580006528\"> </a></td><td>Chronic lung disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0002383<a name=\"hpo-HP.580002383\"> </a></td><td>Encephalitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000388<a name=\"hpo-HP.580000388\"> </a></td><td>Otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0002530<a name=\"hpo-HP.580002530\"> </a></td><td>Axial dystonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002780<a name=\"hpo-HP.580002780\"> </a></td><td>Bronchomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008755<a name=\"hpo-HP.580008755\"> </a></td><td>Laryngotracheomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000308<a name=\"hpo-HP.580000308\"> </a></td><td>Microretrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002786<a name=\"hpo-HP.580002786\"> </a></td><td>Tracheobronchomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012389<a name=\"hpo-HP.580012389\"> </a></td><td>Appendicular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011323<a name=\"hpo-HP.580011323\"> </a></td><td>Cleft of chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000417<a name=\"hpo-HP.580000417\"> </a></td><td>Slender nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0001863<a name=\"hpo-HP.580001863\"> </a></td><td>Toe clinodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0008386<a name=\"hpo-HP.580008386\"> </a></td><td>Aplasia/Hypoplasia of the nails</td></tr><tr><td style=\"white-space:nowrap\">HP:0006989<a name=\"hpo-HP.580006989\"> </a></td><td>Dysplastic corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0100954<a name=\"hpo-HP.580100954\"> </a></td><td>Open operculum</td></tr><tr><td style=\"white-space:nowrap\">HP:0004482<a name=\"hpo-HP.580004482\"> </a></td><td>Relative macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:3000033<a name=\"hpo-HP.583000033\"> </a></td><td>Abnormal nasopharyngeal adenoid morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009062<a name=\"hpo-HP.580009062\"> </a></td><td>Infantile axial hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002189<a name=\"hpo-HP.580002189\"> </a></td><td>obsolete Excessive daytime sleepiness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002141<a name=\"hpo-HP.580002141\"> </a></td><td>Gait imbalance</td></tr><tr><td style=\"white-space:nowrap\">HP:0012734<a name=\"hpo-HP.580012734\"> </a></td><td>Ketotic hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005968<a name=\"hpo-HP.580005968\"> </a></td><td>Temperature instability</td></tr><tr><td style=\"white-space:nowrap\">HP:0012538<a name=\"hpo-HP.580012538\"> </a></td><td>Gluten intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0000979<a name=\"hpo-HP.580000979\"> </a></td><td>Purpura</td></tr><tr><td style=\"white-space:nowrap\">HP:0001988<a name=\"hpo-HP.580001988\"> </a></td><td>Recurrent hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001488<a name=\"hpo-HP.580001488\"> </a></td><td>Bilateral ptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011229<a name=\"hpo-HP.580011229\"> </a></td><td>Broad eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0004440<a name=\"hpo-HP.580004440\"> </a></td><td>Coronal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004453<a name=\"hpo-HP.580004453\"> </a></td><td>Overfolding of the superior helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0012547<a name=\"hpo-HP.580012547\"> </a></td><td>Abnormal involuntary eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0100814<a name=\"hpo-HP.580100814\"> </a></td><td>Blue nevus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010751<a name=\"hpo-HP.580010751\"> </a></td><td>Dimple chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0007087<a name=\"hpo-HP.580007087\"> </a></td><td>obsolete Involuntary jerking movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0012498<a name=\"hpo-HP.580012498\"> </a></td><td>Nuchal cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0002472<a name=\"hpo-HP.580002472\"> </a></td><td>Small cerebral cortex</td></tr><tr><td style=\"white-space:nowrap\">HP:0100307<a name=\"hpo-HP.580100307\"> </a></td><td>Cerebellar hemisphere hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002151<a name=\"hpo-HP.580002151\"> </a></td><td>Increased serum lactate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001698<a name=\"hpo-HP.580001698\"> </a></td><td>Pericardial effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0006903<a name=\"hpo-HP.580006903\"> </a></td><td>Congenital peripheral neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006895<a name=\"hpo-HP.580006895\"> </a></td><td>Lower limb hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002744<a name=\"hpo-HP.580002744\"> </a></td><td>Bilateral cleft lip and palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0010664<a name=\"hpo-HP.580010664\"> </a></td><td>Fusion of the left and right thalami</td></tr><tr><td style=\"white-space:nowrap\">HP:0000327<a name=\"hpo-HP.580000327\"> </a></td><td>Hypoplasia of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0000474<a name=\"hpo-HP.580000474\"> </a></td><td>Thickened nuchal skin fold</td></tr><tr><td style=\"white-space:nowrap\">HP:0000105<a name=\"hpo-HP.580000105\"> </a></td><td>Enlarged kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0000113<a name=\"hpo-HP.580000113\"> </a></td><td>Polycystic kidney dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000104<a name=\"hpo-HP.580000104\"> </a></td><td>Renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001362<a name=\"hpo-HP.580001362\"> </a></td><td>Calvarial skull defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0008245<a name=\"hpo-HP.580008245\"> </a></td><td>Pituitary hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001552<a name=\"hpo-HP.580001552\"> </a></td><td>Barrel-shaped chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0006297<a name=\"hpo-HP.580006297\"> </a></td><td>Hypoplasia of dental enamel</td></tr><tr><td style=\"white-space:nowrap\">HP:0100023<a name=\"hpo-HP.580100023\"> </a></td><td>Recurrent hand flapping</td></tr><tr><td style=\"white-space:nowrap\">HP:0005518<a name=\"hpo-HP.580005518\"> </a></td><td>Increased mean corpuscular volume</td></tr><tr><td style=\"white-space:nowrap\">HP:0012418<a name=\"hpo-HP.580012418\"> </a></td><td>Hypoxemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100259<a name=\"hpo-HP.580100259\"> </a></td><td>Postaxial polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010814<a name=\"hpo-HP.580010814\"> </a></td><td>Abnormal position of hair whorl</td></tr><tr><td style=\"white-space:nowrap\">HP:0003764<a name=\"hpo-HP.580003764\"> </a></td><td>Nevus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000445<a name=\"hpo-HP.580000445\"> </a></td><td>Wide nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0010677<a name=\"hpo-HP.580010677\"> </a></td><td>Enuresis nocturna</td></tr><tr><td style=\"white-space:nowrap\">HP:0001510<a name=\"hpo-HP.580001510\"> </a></td><td>Growth delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0012428<a name=\"hpo-HP.580012428\"> </a></td><td>Prominent calcaneus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012471<a name=\"hpo-HP.580012471\"> </a></td><td>Thick vermilion border</td></tr><tr><td style=\"white-space:nowrap\">HP:0007110<a name=\"hpo-HP.580007110\"> </a></td><td>Central hypoventilation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010614<a name=\"hpo-HP.580010614\"> </a></td><td>Fibroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001034<a name=\"hpo-HP.580001034\"> </a></td><td>Hypermelanotic macule</td></tr><tr><td style=\"white-space:nowrap\">HP:0011365<a name=\"hpo-HP.580011365\"> </a></td><td>Patchy hypopigmentation of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0001920<a name=\"hpo-HP.580001920\"> </a></td><td>Renal artery stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002828<a name=\"hpo-HP.580002828\"> </a></td><td>Multiple joint contractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0002144<a name=\"hpo-HP.580002144\"> </a></td><td>Tethered cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0010964<a name=\"hpo-HP.580010964\"> </a></td><td>Abnormal circulating long-chain fatty-acid concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0010536<a name=\"hpo-HP.580010536\"> </a></td><td>Central sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0011262<a name=\"hpo-HP.580011262\"> </a></td><td>Crimped helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0040079<a name=\"hpo-HP.580040079\"> </a></td><td>Irregular dentition</td></tr><tr><td style=\"white-space:nowrap\">HP:0011481<a name=\"hpo-HP.580011481\"> </a></td><td>Abnormal lacrimal duct morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000220<a name=\"hpo-HP.580000220\"> </a></td><td>Velopharyngeal insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002153<a name=\"hpo-HP.580002153\"> </a></td><td>Hyperkalemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002148<a name=\"hpo-HP.580002148\"> </a></td><td>Hypophosphatemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012621<a name=\"hpo-HP.580012621\"> </a></td><td>Persistent cloaca</td></tr><tr><td style=\"white-space:nowrap\">HP:0000867<a name=\"hpo-HP.580000867\"> </a></td><td>Secondary hyperparathyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0003762<a name=\"hpo-HP.580003762\"> </a></td><td>Uterus didelphys</td></tr><tr><td style=\"white-space:nowrap\">HP:0100512<a name=\"hpo-HP.580100512\"> </a></td><td>Low levels of vitamin D</td></tr><tr><td style=\"white-space:nowrap\">HP:0012156<a name=\"hpo-HP.580012156\"> </a></td><td>Hemophagocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008209<a name=\"hpo-HP.580008209\"> </a></td><td>Premature ovarian insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0004349<a name=\"hpo-HP.580004349\"> </a></td><td>Reduced bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0001924<a name=\"hpo-HP.580001924\"> </a></td><td>Sideroblastic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011703<a name=\"hpo-HP.580011703\"> </a></td><td>Sinus tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010609<a name=\"hpo-HP.580010609\"> </a></td><td>Skin tags</td></tr><tr><td style=\"white-space:nowrap\">HP:0002725<a name=\"hpo-HP.580002725\"> </a></td><td>Systemic lupus erythematosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0003193<a name=\"hpo-HP.580003193\"> </a></td><td>Allergic rhinitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006896<a name=\"hpo-HP.580006896\"> </a></td><td>Hypnopompic hallucinations</td></tr><tr><td style=\"white-space:nowrap\">HP:0002524<a name=\"hpo-HP.580002524\"> </a></td><td>Cataplexy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005227<a name=\"hpo-HP.580005227\"> </a></td><td>Adenomatous colonic polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012173<a name=\"hpo-HP.580012173\"> </a></td><td>Orthostatic tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001271<a name=\"hpo-HP.580001271\"> </a></td><td>Polyneuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0009120<a name=\"hpo-HP.580009120\"> </a></td><td>Aplasia/Hypoplasia involving the sinuses</td></tr><tr><td style=\"white-space:nowrap\">HP:0000625<a name=\"hpo-HP.580000625\"> </a></td><td>Eyelid coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0009754<a name=\"hpo-HP.580009754\"> </a></td><td>Fibrous syngnathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012478<a name=\"hpo-HP.580012478\"> </a></td><td>Temporomandibular joint ankylosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001233<a name=\"hpo-HP.580001233\"> </a></td><td>2-3 finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000811<a name=\"hpo-HP.580000811\"> </a></td><td>Abnormal external genitalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005120<a name=\"hpo-HP.580005120\"> </a></td><td>Abnormal cardiac atrium morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008388<a name=\"hpo-HP.580008388\"> </a></td><td>Abnormal toenail morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011467<a name=\"hpo-HP.580011467\"> </a></td><td>Absent gallbladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0010760<a name=\"hpo-HP.580010760\"> </a></td><td>Absent toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001545<a name=\"hpo-HP.580001545\"> </a></td><td>Anteriorly placed anus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001640<a name=\"hpo-HP.580001640\"> </a></td><td>Cardiomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002990<a name=\"hpo-HP.580002990\"> </a></td><td>Fibular aplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004443<a name=\"hpo-HP.580004443\"> </a></td><td>Lambdoidal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008569<a name=\"hpo-HP.580008569\"> </a></td><td>Microtia, second degree</td></tr><tr><td style=\"white-space:nowrap\">HP:0006277<a name=\"hpo-HP.580006277\"> </a></td><td>Pancreatic hyperplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010445<a name=\"hpo-HP.580010445\"> </a></td><td>Primum atrial septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0011640<a name=\"hpo-HP.580011640\"> </a></td><td>Single coronary artery origin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011608<a name=\"hpo-HP.580011608\"> </a></td><td>Type II truncus arteriosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0011327<a name=\"hpo-HP.580011327\"> </a></td><td>Posterior plagiocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0007655<a name=\"hpo-HP.580007655\"> </a></td><td>Eversion of lateral third of lower eyelids</td></tr><tr><td style=\"white-space:nowrap\">HP:0010747<a name=\"hpo-HP.580010747\"> </a></td><td>Medial flaring of the eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0005957<a name=\"hpo-HP.580005957\"> </a></td><td>Breathing dysregulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000992<a name=\"hpo-HP.580000992\"> </a></td><td>Cutaneous photosensitivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0011995<a name=\"hpo-HP.580011995\"> </a></td><td>Atrial septal dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000377<a name=\"hpo-HP.580000377\"> </a></td><td>Abnormality of the pinna</td></tr><tr><td style=\"white-space:nowrap\">HP:0011266<a name=\"hpo-HP.580011266\"> </a></td><td>Microtia, first degree</td></tr><tr><td style=\"white-space:nowrap\">HP:0012650<a name=\"hpo-HP.580012650\"> </a></td><td>Perisylvian polymicrogyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0004970<a name=\"hpo-HP.580004970\"> </a></td><td>Ascending tubular aorta aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0008348<a name=\"hpo-HP.580008348\"> </a></td><td>Decreased circulating IgG2 level</td></tr><tr><td style=\"white-space:nowrap\">HP:0012115<a name=\"hpo-HP.580012115\"> </a></td><td>Hepatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006979<a name=\"hpo-HP.580006979\"> </a></td><td>Sleep-wake cycle disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0008587<a name=\"hpo-HP.580008587\"> </a></td><td>Mild neurosensory hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0006097<a name=\"hpo-HP.580006097\"> </a></td><td>3-4 finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005263<a name=\"hpo-HP.580005263\"> </a></td><td>Gastritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0200043<a name=\"hpo-HP.580200043\"> </a></td><td>Verrucae</td></tr><tr><td style=\"white-space:nowrap\">HP:0009600<a name=\"hpo-HP.580009600\"> </a></td><td>Flexion contracture of thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0010818<a name=\"hpo-HP.580010818\"> </a></td><td>Generalized tonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0002599<a name=\"hpo-HP.580002599\"> </a></td><td>Head titubation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002090<a name=\"hpo-HP.580002090\"> </a></td><td>Pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030423<a name=\"hpo-HP.580030423\"> </a></td><td>Splenic cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0030187<a name=\"hpo-HP.580030187\"> </a></td><td>Titubation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002375<a name=\"hpo-HP.580002375\"> </a></td><td>Hypokinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007166<a name=\"hpo-HP.580007166\"> </a></td><td>Paroxysmal dyskinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003077<a name=\"hpo-HP.580003077\"> </a></td><td>Hyperlipidemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000017<a name=\"hpo-HP.580000017\"> </a></td><td>Nocturia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100555<a name=\"hpo-HP.580100555\"> </a></td><td>Asymmetric growth</td></tr><tr><td style=\"white-space:nowrap\">HP:0011847<a name=\"hpo-HP.580011847\"> </a></td><td>Giant cell tumor of bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0000112<a name=\"hpo-HP.580000112\"> </a></td><td>Nephropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000246<a name=\"hpo-HP.580000246\"> </a></td><td>Sinusitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001012<a name=\"hpo-HP.580001012\"> </a></td><td>Multiple lipomas</td></tr><tr><td style=\"white-space:nowrap\">HP:0000851<a name=\"hpo-HP.580000851\"> </a></td><td>Congenital hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0002345<a name=\"hpo-HP.580002345\"> </a></td><td>Action tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002677<a name=\"hpo-HP.580002677\"> </a></td><td>Small foramen magnum</td></tr><tr><td style=\"white-space:nowrap\">HP:0011947<a name=\"hpo-HP.580011947\"> </a></td><td>Respiratory tract infection</td></tr><tr><td style=\"white-space:nowrap\">HP:0012151<a name=\"hpo-HP.580012151\"> </a></td><td>Hemothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0005988<a name=\"hpo-HP.580005988\"> </a></td><td>Congenital muscular torticollis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002329<a name=\"hpo-HP.580002329\"> </a></td><td>Drowsiness</td></tr><tr><td style=\"white-space:nowrap\">HP:0012395<a name=\"hpo-HP.580012395\"> </a></td><td>Seasonal allergy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011679<a name=\"hpo-HP.580011679\"> </a></td><td>Tetralogy of Fallot with pulmonary stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001864<a name=\"hpo-HP.580001864\"> </a></td><td>Clinodactyly of the 5th toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0006934<a name=\"hpo-HP.580006934\"> </a></td><td>Congenital nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0100355<a name=\"hpo-HP.580100355\"> </a></td><td>Contractures of the distal interphalangeal joint of the 5th toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0007894<a name=\"hpo-HP.580007894\"> </a></td><td>Hypopigmentation of the fundus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012377<a name=\"hpo-HP.580012377\"> </a></td><td>Hemianopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002354<a name=\"hpo-HP.580002354\"> </a></td><td>Memory impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000872<a name=\"hpo-HP.580000872\"> </a></td><td>Hashimoto thyroiditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002519<a name=\"hpo-HP.580002519\"> </a></td><td>Hypnagogic hallucinations</td></tr><tr><td style=\"white-space:nowrap\">HP:0010647<a name=\"hpo-HP.580010647\"> </a></td><td>Abnormal elasticity of skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0002592<a name=\"hpo-HP.580002592\"> </a></td><td>Gastric ulcer</td></tr><tr><td style=\"white-space:nowrap\">HP:0004938<a name=\"hpo-HP.580004938\"> </a></td><td>Tortuous cerebral arteries</td></tr><tr><td style=\"white-space:nowrap\">HP:0004948<a name=\"hpo-HP.580004948\"> </a></td><td>Vascular tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002516<a name=\"hpo-HP.580002516\"> </a></td><td>Increased intracranial pressure</td></tr><tr><td style=\"white-space:nowrap\">HP:0006460<a name=\"hpo-HP.580006460\"> </a></td><td>Increased laxity of ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0002317<a name=\"hpo-HP.580002317\"> </a></td><td>Unsteady gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0000182<a name=\"hpo-HP.580000182\"> </a></td><td>Movement abnormality of the tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0009887<a name=\"hpo-HP.580009887\"> </a></td><td>Abnormality of hair pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005824<a name=\"hpo-HP.580005824\"> </a></td><td>Clinodactyly of the 2nd toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002212<a name=\"hpo-HP.580002212\"> </a></td><td>Curly hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0009803<a name=\"hpo-HP.580009803\"> </a></td><td>Short phalanx of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0000572<a name=\"hpo-HP.580000572\"> </a></td><td>Visual loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0005216<a name=\"hpo-HP.580005216\"> </a></td><td>Impaired mastication</td></tr><tr><td style=\"white-space:nowrap\">HP:0000619<a name=\"hpo-HP.580000619\"> </a></td><td>Impaired convergence</td></tr><tr><td style=\"white-space:nowrap\">HP:0002403<a name=\"hpo-HP.580002403\"> </a></td><td>Positive Romberg sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0008744<a name=\"hpo-HP.580008744\"> </a></td><td>Abnormal aryepiglottic fold morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002374<a name=\"hpo-HP.580002374\"> </a></td><td>Diminished movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0008277<a name=\"hpo-HP.580008277\"> </a></td><td>Abnormal blood zinc concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0012781<a name=\"hpo-HP.580012781\"> </a></td><td>Mid-frequency hearing loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0100758<a name=\"hpo-HP.580100758\"> </a></td><td>Gangrene</td></tr><tr><td style=\"white-space:nowrap\">HP:0003256<a name=\"hpo-HP.580003256\"> </a></td><td>Abnormality of the coagulation cascade</td></tr><tr><td style=\"white-space:nowrap\">HP:0004387<a name=\"hpo-HP.580004387\"> </a></td><td>Enterocolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011029<a name=\"hpo-HP.580011029\"> </a></td><td>Internal hemorrhage</td></tr><tr><td style=\"white-space:nowrap\">HP:0011649<a name=\"hpo-HP.580011649\"> </a></td><td>Patent ductus arteriosus after premature birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0012050<a name=\"hpo-HP.580012050\"> </a></td><td>Anasarca</td></tr><tr><td style=\"white-space:nowrap\">HP:0001683<a name=\"hpo-HP.580001683\"> </a></td><td>Ectopia cordis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011682<a name=\"hpo-HP.580011682\"> </a></td><td>Perimembranous ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0010624<a name=\"hpo-HP.580010624\"> </a></td><td>Aplastic/hypoplastic toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002705<a name=\"hpo-HP.580002705\"> </a></td><td>High, narrow palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0011340<a name=\"hpo-HP.580011340\"> </a></td><td>Incomplete cleft of the upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0011613<a name=\"hpo-HP.580011613\"> </a></td><td>Interrupted aortic arch type B</td></tr><tr><td style=\"white-space:nowrap\">HP:0006167<a name=\"hpo-HP.580006167\"> </a></td><td>Prominent proximal interphalangeal joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0002918<a name=\"hpo-HP.580002918\"> </a></td><td>Hypermagnesemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011937<a name=\"hpo-HP.580011937\"> </a></td><td>Hypoplastic fifth toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0001067<a name=\"hpo-HP.580001067\"> </a></td><td>Neurofibromas</td></tr><tr><td style=\"white-space:nowrap\">HP:0011403<a name=\"hpo-HP.580011403\"> </a></td><td>Abnormal umbilical cord blood vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0003316<a name=\"hpo-HP.580003316\"> </a></td><td>Butterfly vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0002247<a name=\"hpo-HP.580002247\"> </a></td><td>Duodenal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008439<a name=\"hpo-HP.580008439\"> </a></td><td>Lumbar hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0011599<a name=\"hpo-HP.580011599\"> </a></td><td>Mesocardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008467<a name=\"hpo-HP.580008467\"> </a></td><td>Thoracic hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0004626<a name=\"hpo-HP.580004626\"> </a></td><td>Lumbar scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006808<a name=\"hpo-HP.580006808\"> </a></td><td>Cerebral hypomyelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0002926<a name=\"hpo-HP.580002926\"> </a></td><td>Abnormality of thyroid physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0007970<a name=\"hpo-HP.580007970\"> </a></td><td>Congenital ptosis</td></tr></table></div>"},"url":"http://purl.obolibrary.org/obo/hp.owl","version":"0.2.0","name":"HPO","title":"Human Phenotype Ontology","status":"draft","experimental":false,"date":"2022-11-28T21:07:57+00:00","publisher":"NCPI FHIR Working Group","contact":[{"name":"NCPI FHIR Working Group","telecom":[{"system":"url","value":"https://github.com/nih-ncpi"}]},{"name":"Meen Chul Kim","telecom":[{"system":"email","value":"meenchul@d3b.center","use":"work"}]}],"description":"The Human Phenotype Ontology (HPO) provides a standardized vocabulary of phenotypic abnormalities encountered in human disease. Please see license of HPO at http://www.human-phenotype-ontology.org","valueSet":"http://fhir.ncpi-project-forge.io/ValueSet/phenotype-codes","hierarchyMeaning":"is-a","compositional":false,"versionNeeded":false,"content":"fragment","count":1880,"filter":[{"code":"root","operator":["="],"value":"True or false."},{"code":"deprecated","operator":["="],"value":"True or false."},{"code":"imported","operator":["="],"value":"True or false"}],"property":[{"code":"parent","description":"Parent codes.","type":"code"},{"code":"imported","description":"Indicates if the concept is imported from another code system.","type":"boolean"},{"code":"root","description":"Indicates if this concept is a root concept (i.e. Thing is equivalent or a direct parent)","type":"boolean"},{"code":"deprecated","description":"Indicates if this concept is deprecated.","type":"boolean"}],"concept":[{"code":"HP:0000365","display":"Hearing impairment"},{"code":"HP:0002564","display":"obsolete Malformation of the heart and great vessels"},{"code":"HP:0001028","display":"Hemangioma"},{"code":"HP:0000476","display":"Cystic hygroma"},{"code":"HP:0000568","display":"Microphthalmia"},{"code":"HP:0000518","display":"Cataract"},{"code":"HP:0000612","display":"Iris coloboma"},{"code":"HP:0000567","display":"Chorioretinal coloboma"},{"code":"HP:0000316","display":"Hypertelorism"},{"code":"HP:0000482","display":"Microcornea"},{"code":"HP:0000588","display":"Optic nerve coloboma"},{"code":"HP:0004426","display":"Abnormality of the cheek"},{"code":"HP:0009125","display":"Lipodystrophy"},{"code":"HP:0002023","display":"Anal atresia"},{"code":"HP:0003468","display":"Abnormal vertebral morphology"},{"code":"HP:0000545","display":"Myopia"},{"code":"HP:0000122","display":"Unilateral renal agenesis"},{"code":"HP:0002143","display":"Abnormality of the spinal cord"},{"code":"HP:0003508","display":"Proportionate short stature"},{"code":"HP:0000271","display":"Abnormality of the face"},{"code":"HP:0000637","display":"Long palpebral fissure"},{"code":"HP:0000492","display":"Abnormal eyelid morphology"},{"code":"HP:0000389","display":"Chronic otitis media"},{"code":"HP:0000400","display":"Macrotia"},{"code":"HP:0000405","display":"Conductive hearing impairment"},{"code":"HP:0012712","display":"Mild hearing impairment"},{"code":"HP:0005280","display":"Depressed nasal bridge"},{"code":"HP:0000431","display":"Wide nasal bridge"},{"code":"HP:0000319","display":"Smooth philtrum"},{"code":"HP:0000175","display":"Cleft palate"},{"code":"HP:0001611","display":"Nasal speech"},{"code":"HP:0002099","display":"Asthma"},{"code":"HP:0001397","display":"Hepatic steatosis"},{"code":"HP:0001081","display":"Cholelithiasis"},{"code":"HP:0002650","display":"Scoliosis"},{"code":"HP:0001212","display":"Prominent fingertip pads"},{"code":"HP:0001328","display":"Specific learning disability"},{"code":"HP:0000824","display":"Growth hormone deficiency"},{"code":"HP:0002607","display":"Bowel incontinence"},{"code":"HP:0100731","display":"Transverse facial cleft"},{"code":"HP:0000528","display":"Anophthalmia"},{"code":"HP:0000601","display":"Hypotelorism"},{"code":"HP:0000369","display":"Low-set ears"},{"code":"HP:0001274","display":"Agenesis of corpus callosum"},{"code":"HP:0002084","display":"Encephalocele"},{"code":"HP:0007033","display":"Cerebellar dysplasia"},{"code":"HP:0100336","display":"Bilateral cleft lip"},{"code":"HP:0100337","display":"Bilateral cleft palate"},{"code":"HP:0001511","display":"Intrauterine growth retardation"},{"code":"HP:0011451","display":"Congenital microcephaly"},{"code":"HP:0000324","display":"Facial asymmetry"},{"code":"HP:0000581","display":"Blepharophimosis"},{"code":"HP:0000508","display":"Ptosis"},{"code":"HP:0008551","display":"Microtia"},{"code":"HP:0001631","display":"Atrial septal defect"},{"code":"HP:0000085","display":"Horseshoe kidney"},{"code":"HP:0011927","display":"Short digit"},{"code":"HP:0001156","display":"Brachydactyly"},{"code":"HP:0002066","display":"Gait ataxia"},{"code":"HP:0001250","display":"Seizure"},{"code":"HP:0001263","display":"Global developmental delay"},{"code":"HP:0001562","display":"Oligohydramnios"},{"code":"HP:0001195","display":"Single umbilical artery"},{"code":"HP:0006349","display":"Agenesis of permanent teeth"},{"code":"HP:0000668","display":"Hypodontia"},{"code":"HP:0000677","display":"Oligodontia"},{"code":"HP:0001252","display":"Muscular hypotonia"},{"code":"HP:0003429","display":"CNS hypomyelination"},{"code":"HP:0010864","display":"Intellectual disability, severe"},{"code":"HP:0004325","display":"Decreased body weight"},{"code":"HP:0000666","display":"Horizontal nystagmus"},{"code":"HP:0000218","display":"High palate"},{"code":"HP:0010809","display":"Broad uvula"},{"code":"HP:0000767","display":"Pectus excavatum"},{"code":"HP:0003691","display":"Scapular winging"},{"code":"HP:0002616","display":"Aortic root aneurysm"},{"code":"HP:0001601","display":"Laryngomalacia"},{"code":"HP:0002021","display":"Pyloric stenosis"},{"code":"HP:0001388","display":"Joint laxity"},{"code":"HP:0001187","display":"Hyperextensibility of the finger joints"},{"code":"HP:0000741","display":"Apathy"},{"code":"HP:0000817","display":"Poor eye contact"},{"code":"HP:0000821","display":"Hypothyroidism"},{"code":"HP:0000002","display":"Abnormality of body height"},{"code":"HP:0000079","display":"Abnormality of the urinary system"},{"code":"HP:0000164","display":"Abnormality of the dentition"},{"code":"HP:0000364","display":"Hearing abnormality"},{"code":"HP:0000366","display":"Abnormality of the nose"},{"code":"HP:0000464","display":"Abnormality of the neck"},{"code":"HP:0000707","display":"Abnormality of the nervous system"},{"code":"HP:0000708","display":"Behavioral abnormality"},{"code":"HP:0000769","display":"Abnormality of the breast"},{"code":"HP:0000772","display":"Abnormality of the ribs"},{"code":"HP:0000775","display":"Abnormality of the diaphragm"},{"code":"HP:0000889","display":"Abnormality of the clavicle"},{"code":"HP:0000925","display":"Abnormality of the vertebral column"},{"code":"HP:0001080","display":"Biliary tract abnormality"},{"code":"HP:0001392","display":"Abnormality of the liver"},{"code":"HP:0001438","display":"Abnormal abdomen morphology"},{"code":"HP:0001608","display":"Abnormality of the voice"},{"code":"HP:0001627","display":"Abnormal heart morphology"},{"code":"HP:0001732","display":"Abnormality of the pancreas"},{"code":"HP:0001739","display":"Abnormality of the nasopharynx"},{"code":"HP:0001743","display":"Abnormality of the spleen"},{"code":"HP:0001760","display":"Abnormal foot morphology"},{"code":"HP:0001871","display":"Abnormality of blood and blood-forming tissues"},{"code":"HP:0002031","display":"Abnormal esophagus morphology"},{"code":"HP:0002244","display":"Abnormality of the small intestine"},{"code":"HP:0002246","display":"Abnormality of the duodenum"},{"code":"HP:0002250","display":"Abnormal large intestine morphology"},{"code":"HP:0002644","display":"Abnormality of pelvic girdle bone morphology"},{"code":"HP:0002664","display":"Neoplasm"},{"code":"HP:0002715","display":"Abnormality of the immune system"},{"code":"HP:0002814","display":"Abnormality of the lower limb"},{"code":"HP:0002817","display":"Abnormality of the upper limb"},{"code":"HP:0005483","display":"Abnormal epiglottis morphology"},{"code":"HP:0008777","display":"Abnormal vocal cord morphology"},{"code":"HP:0011844","display":"Abnormal appendicular skeleton morphology"},{"code":"HP:0012732","display":"Anorectal anomaly"},{"code":"HP:0001508","display":"Failure to thrive"},{"code":"HP:0002902","display":"Hyponatremia"},{"code":"HP:0012236","display":"Elevated sweat chloride"},{"code":"HP:0000347","display":"Micrognathia"},{"code":"HP:0000926","display":"Platyspondyly"},{"code":"HP:0001371","display":"Flexion contracture"},{"code":"HP:0001875","display":"Neutropenia"},{"code":"HP:0001888","display":"Lymphopenia"},{"code":"HP:0002857","display":"Genu valgum"},{"code":"HP:0002986","display":"Radial bowing"},{"code":"HP:0003015","display":"Flared metaphysis"},{"code":"HP:0003025","display":"Metaphyseal irregularity"},{"code":"HP:0003097","display":"Short femur"},{"code":"HP:0003300","display":"Ovoid vertebral bodies"},{"code":"HP:0003307","display":"Hyperlordosis"},{"code":"HP:0004209","display":"Clinodactyly of the 5th finger"},{"code":"HP:0004322","display":"Short stature"},{"code":"HP:0005792","display":"Short humerus"},{"code":"HP:0006248","display":"Limited wrist movement"},{"code":"HP:0000944","display":"Abnormality of the metaphysis"},{"code":"HP:0011921","display":"Exudative pleural effusion"},{"code":"HP:0003043","display":"Abnormality of the shoulder"},{"code":"HP:0000290","display":"Abnormality of the forehead"},{"code":"HP:0005288","display":"Abnormality of the nares"},{"code":"HP:0000234","display":"Abnormality of the head"},{"code":"HP:0004323","display":"Abnormality of body weight"},{"code":"HP:0000483","display":"Astigmatism"},{"code":"HP:0011003","display":"High myopia"},{"code":"HP:0000470","display":"Short neck"},{"code":"HP:0030044","display":"Flexion contracture of digit"},{"code":"HP:0100871","display":"Abnormality of the palm"},{"code":"HP:0004334","display":"Dermal atrophy"},{"code":"HP:0001845","display":"Overlapping toe"},{"code":"HP:0000496","display":"Abnormality of eye movement"},{"code":"HP:0001780","display":"Abnormality of toe"},{"code":"HP:0001626","display":"Abnormality of the cardiovascular system"},{"code":"HP:0002086","display":"Abnormality of the respiratory system"},{"code":"HP:0000818","display":"Abnormality of the endocrine system"},{"code":"HP:0012372","display":"Abnormal eye morphology"},{"code":"HP:0009473","display":"Joint contracture of the hand"},{"code":"HP:0003199","display":"Decreased muscle mass"},{"code":"HP:0003202","display":"Skeletal muscle atrophy"},{"code":"HP:0003551","display":"Difficulty climbing stairs"},{"code":"HP:0002355","display":"Difficulty walking"},{"code":"HP:0003546","display":"Exercise intolerance"},{"code":"HP:0003325","display":"Limb-girdle muscle weakness"},{"code":"HP:0003701","display":"Proximal muscle weakness"},{"code":"HP:0003547","display":"Shoulder girdle muscle weakness"},{"code":"HP:0007340","display":"Lower limb muscle weakness"},{"code":"HP:0002168","display":"Scanning speech"},{"code":"HP:0001265","display":"Hyporeflexia"},{"code":"HP:0001284","display":"Areflexia"},{"code":"HP:0003477","display":"Peripheral axonal neuropathy"},{"code":"HP:0000924","display":"Abnormality of the skeletal system"},{"code":"HP:0001291","display":"Abnormal cranial nerve morphology"},{"code":"HP:0003687","display":"Centrally nucleated skeletal muscle fibers"},{"code":"HP:0001324","display":"Muscle weakness"},{"code":"HP:0002515","display":"Waddling gait"},{"code":"HP:0100280","display":"Crohn's disease"},{"code":"HP:0002631","display":"obsolete Dilatation of ascending aorta"},{"code":"HP:0100026","display":"Arteriovenous malformation"},{"code":"HP:0002637","display":"Cerebral ischemia"},{"code":"HP:0002619","display":"Varicose veins"},{"code":"HP:0001159","display":"Syndactyly"},{"code":"HP:0002069","display":"Bilateral tonic-clonic seizure"},{"code":"HP:0000977","display":"Soft skin"},{"code":"HP:0010648","display":"Dermal translucency"},{"code":"HP:0000978","display":"Bruising susceptibility"},{"code":"HP:0001956","display":"Truncal obesity"},{"code":"HP:0000189","display":"Narrow palate"},{"code":"HP:0000678","display":"Dental crowding"},{"code":"HP:0002870","display":"Obstructive sleep apnea"},{"code":"HP:0001763","display":"Pes planus"},{"code":"HP:0000782","display":"Abnormality of the scapula"},{"code":"HP:0001600","display":"Abnormality of the larynx"},{"code":"HP:0002088","display":"Abnormal lung morphology"},{"code":"HP:0011407","display":"Proportionate tall stature"},{"code":"HP:0000541","display":"Retinal detachment"},{"code":"HP:0001373","display":"Joint dislocation"},{"code":"HP:0000938","display":"Osteopenia"},{"code":"HP:0002942","display":"Thoracic kyphosis"},{"code":"HP:0001840","display":"Metatarsus adductus"},{"code":"HP:0001844","display":"Abnormality of the hallux"},{"code":"HP:0001765","display":"Hammertoe"},{"code":"HP:0000606","display":"Abnormality of the periorbital region"},{"code":"HP:0002757","display":"Recurrent fractures"},{"code":"HP:0000647","display":"Sclerocornea"},{"code":"HP:0001166","display":"Arachnodactyly"},{"code":"HP:0005490","display":"Postnatal macrocephaly"},{"code":"HP:0011363","display":"Abnormality of hair growth rate"},{"code":"HP:0000276","display":"Long face"},{"code":"HP:0000275","display":"Narrow face"},{"code":"HP:0000337","display":"Broad forehead"},{"code":"HP:0002267","display":"Exaggerated startle response"},{"code":"HP:0002187","display":"Intellectual disability, profound"},{"code":"HP:0000728","display":"Impaired ability to form peer relationships"},{"code":"HP:0000733","display":"Stereotypy"},{"code":"HP:0000739","display":"Anxiety"},{"code":"HP:0000929","display":"Abnormal skull morphology"},{"code":"HP:0001965","display":"Abnormal scalp morphology"},{"code":"HP:0100538","display":"Abnormality of the supraorbital ridges"},{"code":"HP:0000309","display":"Abnormality of the midface"},{"code":"HP:0000277","display":"Abnormality of the mandible"},{"code":"HP:0000765","display":"Abnormality of the thorax"},{"code":"HP:0100008","display":"Schwannoma"},{"code":"HP:0030038","display":"Enchondroma"},{"code":"HP:0100777","display":"Exostoses"},{"code":"HP:0011663","display":"Right ventricular cardiomyopathy"},{"code":"HP:0011675","display":"Arrhythmia"},{"code":"HP:0001962","display":"Palpitations"},{"code":"HP:0001279","display":"Syncope"},{"code":"HP:0004756","display":"Ventricular tachycardia"},{"code":"HP:0000252","display":"Microcephaly"},{"code":"HP:0000303","display":"Mandibular prognathia"},{"code":"HP:0000664","display":"Synophrys"},{"code":"HP:0001609","display":"Hoarse voice"},{"code":"HP:0002558","display":"Supernumerary nipple"},{"code":"HP:0001634","display":"Mitral valve prolapse"},{"code":"HP:0000028","display":"Cryptorchidism"},{"code":"HP:0000973","display":"Cutis laxa"},{"code":"HP:0001518","display":"Small for gestational age"},{"code":"HP:0000527","display":"Long eyelashes"},{"code":"HP:0002808","display":"Kyphosis"},{"code":"HP:0000248","display":"Brachycephaly"},{"code":"HP:0000505","display":"Visual impairment"},{"code":"HP:0000512","display":"Abnormal electroretinogram"},{"code":"HP:0000517","display":"Abnormality of the lens"},{"code":"HP:0000529","display":"Progressive visual loss"},{"code":"HP:0000586","display":"Shallow orbits"},{"code":"HP:0000603","display":"Central scotoma"},{"code":"HP:0000939","display":"Osteoporosis"},{"code":"HP:0001377","display":"Limited elbow extension"},{"code":"HP:0001387","display":"Joint stiffness"},{"code":"HP:0001822","display":"Hallux valgus"},{"code":"HP:0002657","display":"Spondylometaphyseal dysplasia"},{"code":"HP:0003026","display":"Short long bone"},{"code":"HP:0006462","display":"Generalized bone demineralization"},{"code":"HP:0008873","display":"Disproportionate short-limb short stature"},{"code":"HP:0008905","display":"Rhizomelia"},{"code":"HP:0008922","display":"Childhood-onset short-trunk short stature"},{"code":"HP:0200020","display":"Corneal erosion"},{"code":"HP:0001172","display":"Abnormal thumb morphology"},{"code":"HP:0002286","display":"Fair hair"},{"code":"HP:0010719","display":"Abnormality of hair 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ptosis"}]}},{"name":"tx-resource","resource":{"resourceType":"CodeSystem","id":"mondo","text":{"status":"generated","div":"<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>http://purl.obolibrary.org/obo/mondo.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">MONDO:0005072<a name=\"mondo-MONDO.580005072\"> </a></td><td>neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">MONDO:0002749<a name=\"mondo-MONDO.580002749\"> </a></td><td>extracranial neuroblastoma</td></tr><tr><td style=\"white-space:nowrap\">MONDO:0008542<a name=\"mondo-MONDO.580008542\"> </a></td><td>tetralogy of fallot</td></tr></table></div>"},"url":"http://purl.obolibrary.org/obo/mondo.owl","version":"0.2.0","name":"Mondo","title":"Mondo Disease 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control</td></tr></table></li><li>Include these codes as defined in <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"https://loinc.org/LP35925-4/\">LP35925-4</a></td><td>Body mass index (BMI)</td></tr></table></li><li>Include these codes as defined in <a href=\"CodeSystem-hpo.html\"><code>http://purl.obolibrary.org/obo/hp.owl</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"CodeSystem-hpo.html#hpo-HP.580010772\">HP:0010772</a></td><td>Anomalous pulmonary venous return</td></tr></table></li><li>Include these codes as defined in <a href=\"CodeSystem-mondo.html\"><code>http://purl.obolibrary.org/obo/mondo.owl</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a 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data-dictionary.","compose":{"include":[{"system":"https://uts.nlm.nih.gov/uts/umls","concept":[{"code":"C2348584","display":"Subject Unique Identifier"},{"code":"C0079399","display":"Gender"},{"code":"C168843","display":"Age in Days at Enrollment"},{"code":"C1305855","display":"Body mass index"},{"code":"C0872128","display":"case control"}]},{"system":"http://loinc.org","concept":[{"code":"LP35925-4","display":"Body mass index (BMI)"}]},{"system":"http://purl.obolibrary.org/obo/hp.owl","concept":[{"code":"HP:0010772","display":"Anomalous pulmonary venous return"}]},{"system":"http://purl.obolibrary.org/obo/mondo.owl","concept":[{"code":"0017705","display":"congenital pulmonary venous return anomaly"},{"code":"0007130","display":"congenital total pulmonary venous return anomaly"}]}]}}},{"name":"_limit","valueString":"1000"},{"name":"_incomplete","valueString":"true"}]} +{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"},{"name":"includeDefinition","valueBoolean":false},{"name":"excludeNested","valueBoolean":false},{"name":"incomplete-ok","valueBoolean":true},{"name":"tx-resource","resource":{"resourceType":"CodeSystem","id":"hpo","text":{"status":"generated","div":"<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Properties</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Type</b></td><td><b>Description</b></td></tr><tr><td>parent</td><td>code</td><td>Parent codes.</td></tr><tr><td>imported</td><td>boolean</td><td>Indicates if the concept is imported from another code system.</td></tr><tr><td>root</td><td>boolean</td><td>Indicates if this concept is a root concept (i.e. Thing is equivalent or a direct parent)</td></tr><tr><td>deprecated</td><td>boolean</td><td>Indicates if this concept is deprecated.</td></tr></table><p><b>Filters</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Description</b></td><td><b>operator</b></td><td><b>Value</b></td></tr><tr><td>root</td><td/><td>= </td><td>True or false.</td></tr><tr><td>deprecated</td><td/><td>= </td><td>True or false.</td></tr><tr><td>imported</td><td/><td>= </td><td>True or false</td></tr></table><p>This code system <code>http://purl.obolibrary.org/obo/hp.owl</code> defines many codes, of which the following are a subset:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">HP:0000365<a name=\"hpo-HP.580000365\"> </a></td><td>Hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002564<a name=\"hpo-HP.580002564\"> </a></td><td>obsolete Malformation of the heart and great vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0001028<a name=\"hpo-HP.580001028\"> </a></td><td>Hemangioma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000476<a name=\"hpo-HP.580000476\"> </a></td><td>Cystic hygroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000568<a name=\"hpo-HP.580000568\"> </a></td><td>Microphthalmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000518<a name=\"hpo-HP.580000518\"> </a></td><td>Cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000612<a name=\"hpo-HP.580000612\"> </a></td><td>Iris coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000567<a name=\"hpo-HP.580000567\"> </a></td><td>Chorioretinal coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000316<a name=\"hpo-HP.580000316\"> </a></td><td>Hypertelorism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000482<a name=\"hpo-HP.580000482\"> </a></td><td>Microcornea</td></tr><tr><td style=\"white-space:nowrap\">HP:0000588<a name=\"hpo-HP.580000588\"> </a></td><td>Optic nerve coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0004426<a name=\"hpo-HP.580004426\"> </a></td><td>Abnormality of the cheek</td></tr><tr><td style=\"white-space:nowrap\">HP:0009125<a name=\"hpo-HP.580009125\"> </a></td><td>Lipodystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002023<a name=\"hpo-HP.580002023\"> </a></td><td>Anal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003468<a name=\"hpo-HP.580003468\"> </a></td><td>Abnormal vertebral morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000545<a name=\"hpo-HP.580000545\"> </a></td><td>Myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000122<a name=\"hpo-HP.580000122\"> </a></td><td>Unilateral renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002143<a name=\"hpo-HP.580002143\"> </a></td><td>Abnormality of the spinal cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0003508<a name=\"hpo-HP.580003508\"> </a></td><td>Proportionate short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0000271<a name=\"hpo-HP.580000271\"> </a></td><td>Abnormality of the face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000637<a name=\"hpo-HP.580000637\"> </a></td><td>Long palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000492<a name=\"hpo-HP.580000492\"> </a></td><td>Abnormal eyelid morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000389<a name=\"hpo-HP.580000389\"> </a></td><td>Chronic otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0000400<a name=\"hpo-HP.580000400\"> </a></td><td>Macrotia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000405<a name=\"hpo-HP.580000405\"> </a></td><td>Conductive hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0012712<a name=\"hpo-HP.580012712\"> </a></td><td>Mild hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0005280<a name=\"hpo-HP.580005280\"> </a></td><td>Depressed nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000431<a name=\"hpo-HP.580000431\"> </a></td><td>Wide nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000319<a name=\"hpo-HP.580000319\"> </a></td><td>Smooth philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000175<a name=\"hpo-HP.580000175\"> </a></td><td>Cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001611<a name=\"hpo-HP.580001611\"> </a></td><td>Nasal speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0002099<a name=\"hpo-HP.580002099\"> </a></td><td>Asthma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001397<a name=\"hpo-HP.580001397\"> </a></td><td>Hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001081<a name=\"hpo-HP.580001081\"> </a></td><td>Cholelithiasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002650<a name=\"hpo-HP.580002650\"> </a></td><td>Scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001212<a name=\"hpo-HP.580001212\"> </a></td><td>Prominent fingertip pads</td></tr><tr><td style=\"white-space:nowrap\">HP:0001328<a name=\"hpo-HP.580001328\"> </a></td><td>Specific learning disability</td></tr><tr><td style=\"white-space:nowrap\">HP:0000824<a name=\"hpo-HP.580000824\"> </a></td><td>Growth hormone deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002607<a name=\"hpo-HP.580002607\"> </a></td><td>Bowel incontinence</td></tr><tr><td style=\"white-space:nowrap\">HP:0100731<a name=\"hpo-HP.580100731\"> </a></td><td>Transverse facial cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0000528<a name=\"hpo-HP.580000528\"> </a></td><td>Anophthalmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000601<a name=\"hpo-HP.580000601\"> </a></td><td>Hypotelorism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000369<a name=\"hpo-HP.580000369\"> </a></td><td>Low-set ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001274<a name=\"hpo-HP.580001274\"> </a></td><td>Agenesis of corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002084<a name=\"hpo-HP.580002084\"> </a></td><td>Encephalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0007033<a name=\"hpo-HP.580007033\"> </a></td><td>Cerebellar dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100336<a name=\"hpo-HP.580100336\"> </a></td><td>Bilateral cleft lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0100337<a name=\"hpo-HP.580100337\"> </a></td><td>Bilateral cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001511<a name=\"hpo-HP.580001511\"> </a></td><td>Intrauterine growth retardation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011451<a name=\"hpo-HP.580011451\"> </a></td><td>Congenital microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000324<a name=\"hpo-HP.580000324\"> </a></td><td>Facial asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0000581<a name=\"hpo-HP.580000581\"> </a></td><td>Blepharophimosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000508<a name=\"hpo-HP.580000508\"> </a></td><td>Ptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008551<a name=\"hpo-HP.580008551\"> </a></td><td>Microtia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001631<a name=\"hpo-HP.580001631\"> </a></td><td>Atrial septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0000085<a name=\"hpo-HP.580000085\"> </a></td><td>Horseshoe kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0011927<a name=\"hpo-HP.580011927\"> </a></td><td>Short digit</td></tr><tr><td style=\"white-space:nowrap\">HP:0001156<a name=\"hpo-HP.580001156\"> </a></td><td>Brachydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002066<a name=\"hpo-HP.580002066\"> </a></td><td>Gait ataxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001250<a name=\"hpo-HP.580001250\"> </a></td><td>Seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001263<a name=\"hpo-HP.580001263\"> </a></td><td>Global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0001562<a name=\"hpo-HP.580001562\"> </a></td><td>Oligohydramnios</td></tr><tr><td style=\"white-space:nowrap\">HP:0001195<a name=\"hpo-HP.580001195\"> </a></td><td>Single umbilical artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0006349<a name=\"hpo-HP.580006349\"> </a></td><td>Agenesis of permanent teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000668<a name=\"hpo-HP.580000668\"> </a></td><td>Hypodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000677<a name=\"hpo-HP.580000677\"> </a></td><td>Oligodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001252<a name=\"hpo-HP.580001252\"> </a></td><td>Muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003429<a name=\"hpo-HP.580003429\"> </a></td><td>CNS hypomyelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0010864<a name=\"hpo-HP.580010864\"> </a></td><td>Intellectual disability, severe</td></tr><tr><td style=\"white-space:nowrap\">HP:0004325<a name=\"hpo-HP.580004325\"> </a></td><td>Decreased body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000666<a name=\"hpo-HP.580000666\"> </a></td><td>Horizontal nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000218<a name=\"hpo-HP.580000218\"> </a></td><td>High palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0010809<a name=\"hpo-HP.580010809\"> </a></td><td>Broad uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000767<a name=\"hpo-HP.580000767\"> </a></td><td>Pectus excavatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0003691<a name=\"hpo-HP.580003691\"> </a></td><td>Scapular winging</td></tr><tr><td style=\"white-space:nowrap\">HP:0002616<a name=\"hpo-HP.580002616\"> </a></td><td>Aortic root aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0001601<a name=\"hpo-HP.580001601\"> </a></td><td>Laryngomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002021<a name=\"hpo-HP.580002021\"> </a></td><td>Pyloric stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001388<a name=\"hpo-HP.580001388\"> </a></td><td>Joint laxity</td></tr><tr><td style=\"white-space:nowrap\">HP:0001187<a name=\"hpo-HP.580001187\"> </a></td><td>Hyperextensibility of the finger joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0000741<a name=\"hpo-HP.580000741\"> </a></td><td>Apathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000817<a name=\"hpo-HP.580000817\"> </a></td><td>Poor eye contact</td></tr><tr><td style=\"white-space:nowrap\">HP:0000821<a name=\"hpo-HP.580000821\"> </a></td><td>Hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000002<a name=\"hpo-HP.580000002\"> </a></td><td>Abnormality of body height</td></tr><tr><td style=\"white-space:nowrap\">HP:0000079<a name=\"hpo-HP.580000079\"> </a></td><td>Abnormality of the urinary system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000164<a name=\"hpo-HP.580000164\"> </a></td><td>Abnormality of the dentition</td></tr><tr><td style=\"white-space:nowrap\">HP:0000364<a name=\"hpo-HP.580000364\"> </a></td><td>Hearing abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000366<a name=\"hpo-HP.580000366\"> </a></td><td>Abnormality of the nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0000464<a name=\"hpo-HP.580000464\"> </a></td><td>Abnormality of the neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000707<a name=\"hpo-HP.580000707\"> </a></td><td>Abnormality of the nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000708<a name=\"hpo-HP.580000708\"> </a></td><td>Behavioral abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000769<a name=\"hpo-HP.580000769\"> </a></td><td>Abnormality of the breast</td></tr><tr><td style=\"white-space:nowrap\">HP:0000772<a name=\"hpo-HP.580000772\"> </a></td><td>Abnormality of the ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000775<a name=\"hpo-HP.580000775\"> </a></td><td>Abnormality of the diaphragm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000889<a name=\"hpo-HP.580000889\"> </a></td><td>Abnormality of the clavicle</td></tr><tr><td style=\"white-space:nowrap\">HP:0000925<a name=\"hpo-HP.580000925\"> </a></td><td>Abnormality of the vertebral column</td></tr><tr><td style=\"white-space:nowrap\">HP:0001080<a name=\"hpo-HP.580001080\"> </a></td><td>Biliary tract abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001392<a name=\"hpo-HP.580001392\"> </a></td><td>Abnormality of the liver</td></tr><tr><td style=\"white-space:nowrap\">HP:0001438<a name=\"hpo-HP.580001438\"> </a></td><td>Abnormal abdomen morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001608<a name=\"hpo-HP.580001608\"> </a></td><td>Abnormality of the voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001627<a name=\"hpo-HP.580001627\"> </a></td><td>Abnormal heart morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001732<a name=\"hpo-HP.580001732\"> </a></td><td>Abnormality of the pancreas</td></tr><tr><td style=\"white-space:nowrap\">HP:0001739<a name=\"hpo-HP.580001739\"> </a></td><td>Abnormality of the nasopharynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0001743<a name=\"hpo-HP.580001743\"> </a></td><td>Abnormality of the spleen</td></tr><tr><td style=\"white-space:nowrap\">HP:0001760<a name=\"hpo-HP.580001760\"> </a></td><td>Abnormal foot morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001871<a name=\"hpo-HP.580001871\"> </a></td><td>Abnormality of blood and blood-forming tissues</td></tr><tr><td style=\"white-space:nowrap\">HP:0002031<a name=\"hpo-HP.580002031\"> </a></td><td>Abnormal esophagus morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002244<a name=\"hpo-HP.580002244\"> </a></td><td>Abnormality of the small intestine</td></tr><tr><td style=\"white-space:nowrap\">HP:0002246<a name=\"hpo-HP.580002246\"> </a></td><td>Abnormality of the duodenum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002250<a name=\"hpo-HP.580002250\"> </a></td><td>Abnormal large intestine morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002644<a name=\"hpo-HP.580002644\"> </a></td><td>Abnormality of pelvic girdle bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002664<a name=\"hpo-HP.580002664\"> </a></td><td>Neoplasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0002715<a name=\"hpo-HP.580002715\"> </a></td><td>Abnormality of the immune system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002814<a name=\"hpo-HP.580002814\"> </a></td><td>Abnormality of the lower limb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002817<a name=\"hpo-HP.580002817\"> </a></td><td>Abnormality of the upper limb</td></tr><tr><td style=\"white-space:nowrap\">HP:0005483<a name=\"hpo-HP.580005483\"> </a></td><td>Abnormal epiglottis morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008777<a name=\"hpo-HP.580008777\"> </a></td><td>Abnormal vocal cord morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011844<a name=\"hpo-HP.580011844\"> </a></td><td>Abnormal appendicular skeleton morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012732<a name=\"hpo-HP.580012732\"> </a></td><td>Anorectal anomaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001508<a name=\"hpo-HP.580001508\"> </a></td><td>Failure to thrive</td></tr><tr><td style=\"white-space:nowrap\">HP:0002902<a name=\"hpo-HP.580002902\"> </a></td><td>Hyponatremia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012236<a name=\"hpo-HP.580012236\"> </a></td><td>Elevated sweat chloride</td></tr><tr><td style=\"white-space:nowrap\">HP:0000347<a name=\"hpo-HP.580000347\"> </a></td><td>Micrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000926<a name=\"hpo-HP.580000926\"> </a></td><td>Platyspondyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001371<a name=\"hpo-HP.580001371\"> </a></td><td>Flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0001875<a name=\"hpo-HP.580001875\"> </a></td><td>Neutropenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001888<a name=\"hpo-HP.580001888\"> </a></td><td>Lymphopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002857<a name=\"hpo-HP.580002857\"> </a></td><td>Genu valgum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002986<a name=\"hpo-HP.580002986\"> </a></td><td>Radial bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003015<a name=\"hpo-HP.580003015\"> </a></td><td>Flared metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003025<a name=\"hpo-HP.580003025\"> </a></td><td>Metaphyseal irregularity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003097<a name=\"hpo-HP.580003097\"> </a></td><td>Short femur</td></tr><tr><td style=\"white-space:nowrap\">HP:0003300<a name=\"hpo-HP.580003300\"> </a></td><td>Ovoid vertebral bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0003307<a name=\"hpo-HP.580003307\"> </a></td><td>Hyperlordosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004209<a name=\"hpo-HP.580004209\"> </a></td><td>Clinodactyly of the 5th finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0004322<a name=\"hpo-HP.580004322\"> </a></td><td>Short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0005792<a name=\"hpo-HP.580005792\"> </a></td><td>Short humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0006248<a name=\"hpo-HP.580006248\"> </a></td><td>Limited wrist movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0000944<a name=\"hpo-HP.580000944\"> </a></td><td>Abnormality of the metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011921<a name=\"hpo-HP.580011921\"> </a></td><td>Exudative pleural effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0003043<a name=\"hpo-HP.580003043\"> </a></td><td>Abnormality of the shoulder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000290<a name=\"hpo-HP.580000290\"> </a></td><td>Abnormality of the forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0005288<a name=\"hpo-HP.580005288\"> </a></td><td>Abnormality of the nares</td></tr><tr><td style=\"white-space:nowrap\">HP:0000234<a name=\"hpo-HP.580000234\"> </a></td><td>Abnormality of the head</td></tr><tr><td style=\"white-space:nowrap\">HP:0004323<a name=\"hpo-HP.580004323\"> </a></td><td>Abnormality of body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000483<a name=\"hpo-HP.580000483\"> </a></td><td>Astigmatism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011003<a name=\"hpo-HP.580011003\"> </a></td><td>High myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000470<a name=\"hpo-HP.580000470\"> </a></td><td>Short neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0030044<a name=\"hpo-HP.580030044\"> </a></td><td>Flexion contracture of digit</td></tr><tr><td style=\"white-space:nowrap\">HP:0100871<a name=\"hpo-HP.580100871\"> </a></td><td>Abnormality of the palm</td></tr><tr><td style=\"white-space:nowrap\">HP:0004334<a name=\"hpo-HP.580004334\"> </a></td><td>Dermal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001845<a name=\"hpo-HP.580001845\"> </a></td><td>Overlapping toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000496<a name=\"hpo-HP.580000496\"> </a></td><td>Abnormality of eye movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0001780<a name=\"hpo-HP.580001780\"> </a></td><td>Abnormality of toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001626<a name=\"hpo-HP.580001626\"> </a></td><td>Abnormality of the cardiovascular system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002086<a name=\"hpo-HP.580002086\"> </a></td><td>Abnormality of the respiratory system</td></tr><tr><td style=\"white-space:nowrap\">HP:0000818<a name=\"hpo-HP.580000818\"> </a></td><td>Abnormality of the endocrine system</td></tr><tr><td style=\"white-space:nowrap\">HP:0012372<a name=\"hpo-HP.580012372\"> </a></td><td>Abnormal eye morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009473<a name=\"hpo-HP.580009473\"> </a></td><td>Joint contracture of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0003199<a name=\"hpo-HP.580003199\"> </a></td><td>Decreased muscle mass</td></tr><tr><td style=\"white-space:nowrap\">HP:0003202<a name=\"hpo-HP.580003202\"> </a></td><td>Skeletal muscle atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003551<a name=\"hpo-HP.580003551\"> </a></td><td>Difficulty climbing stairs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002355<a name=\"hpo-HP.580002355\"> </a></td><td>Difficulty walking</td></tr><tr><td style=\"white-space:nowrap\">HP:0003546<a name=\"hpo-HP.580003546\"> </a></td><td>Exercise intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0003325<a name=\"hpo-HP.580003325\"> </a></td><td>Limb-girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003701<a name=\"hpo-HP.580003701\"> </a></td><td>Proximal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003547<a name=\"hpo-HP.580003547\"> </a></td><td>Shoulder girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0007340<a name=\"hpo-HP.580007340\"> </a></td><td>Lower limb muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002168<a name=\"hpo-HP.580002168\"> </a></td><td>Scanning speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0001265<a name=\"hpo-HP.580001265\"> </a></td><td>Hyporeflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001284<a name=\"hpo-HP.580001284\"> </a></td><td>Areflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003477<a name=\"hpo-HP.580003477\"> </a></td><td>Peripheral axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000924<a name=\"hpo-HP.580000924\"> </a></td><td>Abnormality of the skeletal system</td></tr><tr><td style=\"white-space:nowrap\">HP:0001291<a name=\"hpo-HP.580001291\"> </a></td><td>Abnormal cranial nerve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003687<a name=\"hpo-HP.580003687\"> </a></td><td>Centrally nucleated skeletal muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0001324<a name=\"hpo-HP.580001324\"> </a></td><td>Muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002515<a name=\"hpo-HP.580002515\"> </a></td><td>Waddling gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0100280<a name=\"hpo-HP.580100280\"> </a></td><td>Crohn's disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0002631<a name=\"hpo-HP.580002631\"> </a></td><td>obsolete Dilatation of ascending aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0100026<a name=\"hpo-HP.580100026\"> </a></td><td>Arteriovenous malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002637<a name=\"hpo-HP.580002637\"> </a></td><td>Cerebral ischemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002619<a name=\"hpo-HP.580002619\"> </a></td><td>Varicose veins</td></tr><tr><td style=\"white-space:nowrap\">HP:0001159<a name=\"hpo-HP.580001159\"> </a></td><td>Syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002069<a name=\"hpo-HP.580002069\"> </a></td><td>Bilateral tonic-clonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000977<a name=\"hpo-HP.580000977\"> </a></td><td>Soft skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010648<a name=\"hpo-HP.580010648\"> </a></td><td>Dermal translucency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000978<a name=\"hpo-HP.580000978\"> </a></td><td>Bruising susceptibility</td></tr><tr><td style=\"white-space:nowrap\">HP:0001956<a name=\"hpo-HP.580001956\"> </a></td><td>Truncal obesity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000189<a name=\"hpo-HP.580000189\"> </a></td><td>Narrow palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000678<a name=\"hpo-HP.580000678\"> </a></td><td>Dental crowding</td></tr><tr><td style=\"white-space:nowrap\">HP:0002870<a name=\"hpo-HP.580002870\"> </a></td><td>Obstructive sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001763<a name=\"hpo-HP.580001763\"> </a></td><td>Pes planus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000782<a name=\"hpo-HP.580000782\"> </a></td><td>Abnormality of the scapula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001600<a name=\"hpo-HP.580001600\"> </a></td><td>Abnormality of the larynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0002088<a name=\"hpo-HP.580002088\"> </a></td><td>Abnormal lung morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011407<a name=\"hpo-HP.580011407\"> </a></td><td>Proportionate tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0000541<a name=\"hpo-HP.580000541\"> </a></td><td>Retinal detachment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001373<a name=\"hpo-HP.580001373\"> </a></td><td>Joint dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000938<a name=\"hpo-HP.580000938\"> </a></td><td>Osteopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002942<a name=\"hpo-HP.580002942\"> </a></td><td>Thoracic kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001840<a name=\"hpo-HP.580001840\"> </a></td><td>Metatarsus adductus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001844<a name=\"hpo-HP.580001844\"> </a></td><td>Abnormality of the hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0001765<a name=\"hpo-HP.580001765\"> </a></td><td>Hammertoe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000606<a name=\"hpo-HP.580000606\"> </a></td><td>Abnormality of the periorbital region</td></tr><tr><td style=\"white-space:nowrap\">HP:0002757<a name=\"hpo-HP.580002757\"> </a></td><td>Recurrent fractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0000647<a name=\"hpo-HP.580000647\"> </a></td><td>Sclerocornea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001166<a name=\"hpo-HP.580001166\"> </a></td><td>Arachnodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005490<a name=\"hpo-HP.580005490\"> </a></td><td>Postnatal macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0011363<a name=\"hpo-HP.580011363\"> </a></td><td>Abnormality of hair growth rate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000276<a name=\"hpo-HP.580000276\"> </a></td><td>Long face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000275<a name=\"hpo-HP.580000275\"> </a></td><td>Narrow face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000337<a name=\"hpo-HP.580000337\"> </a></td><td>Broad forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0002267<a name=\"hpo-HP.580002267\"> </a></td><td>Exaggerated startle response</td></tr><tr><td style=\"white-space:nowrap\">HP:0002187<a name=\"hpo-HP.580002187\"> </a></td><td>Intellectual disability, profound</td></tr><tr><td style=\"white-space:nowrap\">HP:0000728<a name=\"hpo-HP.580000728\"> </a></td><td>Impaired ability to form peer relationships</td></tr><tr><td style=\"white-space:nowrap\">HP:0000733<a name=\"hpo-HP.580000733\"> </a></td><td>Stereotypy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000739<a name=\"hpo-HP.580000739\"> </a></td><td>Anxiety</td></tr><tr><td style=\"white-space:nowrap\">HP:0000929<a name=\"hpo-HP.580000929\"> </a></td><td>Abnormal skull morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001965<a name=\"hpo-HP.580001965\"> </a></td><td>Abnormal scalp morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100538<a name=\"hpo-HP.580100538\"> </a></td><td>Abnormality of the supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0000309<a name=\"hpo-HP.580000309\"> </a></td><td>Abnormality of the midface</td></tr><tr><td style=\"white-space:nowrap\">HP:0000277<a name=\"hpo-HP.580000277\"> </a></td><td>Abnormality of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000765<a name=\"hpo-HP.580000765\"> </a></td><td>Abnormality of the thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0100008<a name=\"hpo-HP.580100008\"> </a></td><td>Schwannoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0030038<a name=\"hpo-HP.580030038\"> </a></td><td>Enchondroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0100777<a name=\"hpo-HP.580100777\"> </a></td><td>Exostoses</td></tr><tr><td style=\"white-space:nowrap\">HP:0011663<a name=\"hpo-HP.580011663\"> </a></td><td>Right ventricular cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011675<a name=\"hpo-HP.580011675\"> </a></td><td>Arrhythmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001962<a name=\"hpo-HP.580001962\"> </a></td><td>Palpitations</td></tr><tr><td style=\"white-space:nowrap\">HP:0001279<a name=\"hpo-HP.580001279\"> </a></td><td>Syncope</td></tr><tr><td style=\"white-space:nowrap\">HP:0004756<a name=\"hpo-HP.580004756\"> </a></td><td>Ventricular tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000252<a name=\"hpo-HP.580000252\"> </a></td><td>Microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000303<a name=\"hpo-HP.580000303\"> </a></td><td>Mandibular prognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000664<a name=\"hpo-HP.580000664\"> </a></td><td>Synophrys</td></tr><tr><td style=\"white-space:nowrap\">HP:0001609<a name=\"hpo-HP.580001609\"> </a></td><td>Hoarse voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0002558<a name=\"hpo-HP.580002558\"> </a></td><td>Supernumerary nipple</td></tr><tr><td style=\"white-space:nowrap\">HP:0001634<a name=\"hpo-HP.580001634\"> </a></td><td>Mitral valve prolapse</td></tr><tr><td style=\"white-space:nowrap\">HP:0000028<a name=\"hpo-HP.580000028\"> </a></td><td>Cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000973<a name=\"hpo-HP.580000973\"> </a></td><td>Cutis laxa</td></tr><tr><td style=\"white-space:nowrap\">HP:0001518<a name=\"hpo-HP.580001518\"> </a></td><td>Small for gestational age</td></tr><tr><td style=\"white-space:nowrap\">HP:0000527<a name=\"hpo-HP.580000527\"> </a></td><td>Long eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002808<a name=\"hpo-HP.580002808\"> </a></td><td>Kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000248<a name=\"hpo-HP.580000248\"> </a></td><td>Brachycephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000505<a name=\"hpo-HP.580000505\"> </a></td><td>Visual impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000512<a name=\"hpo-HP.580000512\"> </a></td><td>Abnormal electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:0000517<a name=\"hpo-HP.580000517\"> </a></td><td>Abnormality of the lens</td></tr><tr><td style=\"white-space:nowrap\">HP:0000529<a name=\"hpo-HP.580000529\"> </a></td><td>Progressive visual loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0000586<a name=\"hpo-HP.580000586\"> </a></td><td>Shallow orbits</td></tr><tr><td style=\"white-space:nowrap\">HP:0000603<a name=\"hpo-HP.580000603\"> </a></td><td>Central scotoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000939<a name=\"hpo-HP.580000939\"> </a></td><td>Osteoporosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001377<a name=\"hpo-HP.580001377\"> </a></td><td>Limited elbow extension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001387<a name=\"hpo-HP.580001387\"> </a></td><td>Joint stiffness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001822<a name=\"hpo-HP.580001822\"> </a></td><td>Hallux valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0002657<a name=\"hpo-HP.580002657\"> </a></td><td>Spondylometaphyseal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003026<a name=\"hpo-HP.580003026\"> </a></td><td>Short long bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0006462<a name=\"hpo-HP.580006462\"> </a></td><td>Generalized bone demineralization</td></tr><tr><td style=\"white-space:nowrap\">HP:0008873<a name=\"hpo-HP.580008873\"> </a></td><td>Disproportionate short-limb short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0008905<a name=\"hpo-HP.580008905\"> </a></td><td>Rhizomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008922<a name=\"hpo-HP.580008922\"> </a></td><td>Childhood-onset short-trunk short stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0200020<a name=\"hpo-HP.580200020\"> </a></td><td>Corneal erosion</td></tr><tr><td style=\"white-space:nowrap\">HP:0001172<a name=\"hpo-HP.580001172\"> </a></td><td>Abnormal thumb morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002286<a name=\"hpo-HP.580002286\"> </a></td><td>Fair hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0010719<a name=\"hpo-HP.580010719\"> </a></td><td>Abnormality of hair texture</td></tr><tr><td style=\"white-space:nowrap\">HP:0010720<a name=\"hpo-HP.580010720\"> </a></td><td>Abnormal hair pattern</td></tr><tr><td style=\"white-space:nowrap\">HP:0001635<a name=\"hpo-HP.580001635\"> </a></td><td>Congestive heart failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001644<a name=\"hpo-HP.580001644\"> </a></td><td>Dilated cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001663<a name=\"hpo-HP.580001663\"> </a></td><td>Ventricular fibrillation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011712<a name=\"hpo-HP.580011712\"> </a></td><td>Right bundle branch block</td></tr><tr><td style=\"white-space:nowrap\">HP:0000272<a name=\"hpo-HP.580000272\"> </a></td><td>Malar flattening</td></tr><tr><td style=\"white-space:nowrap\">HP:0000286<a name=\"hpo-HP.580000286\"> </a></td><td>Epicanthus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000322<a name=\"hpo-HP.580000322\"> </a></td><td>Short philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000463<a name=\"hpo-HP.580000463\"> </a></td><td>Anteverted nares</td></tr><tr><td style=\"white-space:nowrap\">HP:0000494<a name=\"hpo-HP.580000494\"> </a></td><td>Downslanted palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0000543<a name=\"hpo-HP.580000543\"> </a></td><td>Optic disc pallor</td></tr><tr><td style=\"white-space:nowrap\">HP:0000699<a name=\"hpo-HP.580000699\"> </a></td><td>Diastema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000773<a name=\"hpo-HP.580000773\"> </a></td><td>Short ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000887<a name=\"hpo-HP.580000887\"> </a></td><td>Cupped ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000946<a name=\"hpo-HP.580000946\"> </a></td><td>Hypoplastic ilia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000954<a name=\"hpo-HP.580000954\"> </a></td><td>Single transverse palmar crease</td></tr><tr><td style=\"white-space:nowrap\">HP:0001182<a name=\"hpo-HP.580001182\"> </a></td><td>Tapered finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0001537<a name=\"hpo-HP.580001537\"> </a></td><td>Umbilical hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002007<a name=\"hpo-HP.580002007\"> </a></td><td>Frontal bossing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002980<a name=\"hpo-HP.580002980\"> </a></td><td>Femoral bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002982<a name=\"hpo-HP.580002982\"> </a></td><td>Tibial bowing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003021<a name=\"hpo-HP.580003021\"> </a></td><td>Metaphyseal cupping</td></tr><tr><td style=\"white-space:nowrap\">HP:0005011<a name=\"hpo-HP.580005011\"> </a></td><td>Mesomelic arm shortening</td></tr><tr><td style=\"white-space:nowrap\">HP:0008803<a name=\"hpo-HP.580008803\"> </a></td><td>obsolete Narrow sacroiliac notch</td></tr><tr><td style=\"white-space:nowrap\">HP:0009117<a name=\"hpo-HP.580009117\"> </a></td><td>Aplasia/Hypoplasia of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0011220<a name=\"hpo-HP.580011220\"> </a></td><td>Prominent forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0012801<a name=\"hpo-HP.580012801\"> </a></td><td>Narrow jaw</td></tr><tr><td style=\"white-space:nowrap\">HP:0000243<a name=\"hpo-HP.580000243\"> </a></td><td>Trigonocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000358<a name=\"hpo-HP.580000358\"> </a></td><td>Posteriorly rotated ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0000411<a name=\"hpo-HP.580000411\"> </a></td><td>Protruding ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000646<a name=\"hpo-HP.580000646\"> </a></td><td>Amblyopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002812<a name=\"hpo-HP.580002812\"> </a></td><td>Coxa vara</td></tr><tr><td style=\"white-space:nowrap\">HP:0002970<a name=\"hpo-HP.580002970\"> </a></td><td>Genu varum</td></tr><tr><td style=\"white-space:nowrap\">HP:0012775<a name=\"hpo-HP.580012775\"> </a></td><td>Stellate iris</td></tr><tr><td style=\"white-space:nowrap\">HP:0000278<a name=\"hpo-HP.580000278\"> </a></td><td>Retrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0009796<a name=\"hpo-HP.580009796\"> </a></td><td>Branchial cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0002474<a name=\"hpo-HP.580002474\"> </a></td><td>Expressive language delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0007018<a name=\"hpo-HP.580007018\"> </a></td><td>Attention deficit hyperactivity disorder</td></tr><tr><td style=\"white-space:nowrap\">HP:0003198<a name=\"hpo-HP.580003198\"> </a></td><td>Myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003324<a name=\"hpo-HP.580003324\"> </a></td><td>Generalized muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003552<a name=\"hpo-HP.580003552\"> </a></td><td>Muscle stiffness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003554<a name=\"hpo-HP.580003554\"> </a></td><td>Type 2 muscle fiber atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003557<a name=\"hpo-HP.580003557\"> </a></td><td>Increased variability in muscle fiber diameter</td></tr><tr><td style=\"white-space:nowrap\">HP:0009025<a name=\"hpo-HP.580009025\"> </a></td><td>Increased connective tissue</td></tr><tr><td style=\"white-space:nowrap\">HP:0003635<a name=\"hpo-HP.580003635\"> </a></td><td>Loss of subcutaneous adipose tissue in limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002597<a name=\"hpo-HP.580002597\"> </a></td><td>Abnormality of the vasculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0001649<a name=\"hpo-HP.580001649\"> </a></td><td>Tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001638<a name=\"hpo-HP.580001638\"> </a></td><td>Cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001654<a name=\"hpo-HP.580001654\"> </a></td><td>Abnormal heart valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001671<a name=\"hpo-HP.580001671\"> </a></td><td>Abnormal cardiac septum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000103<a name=\"hpo-HP.580000103\"> </a></td><td>Polyuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0000114<a name=\"hpo-HP.580000114\"> </a></td><td>Proximal tubulopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001878<a name=\"hpo-HP.580001878\"> </a></td><td>Hemolytic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001931<a name=\"hpo-HP.580001931\"> </a></td><td>Hypochromic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001935<a name=\"hpo-HP.580001935\"> </a></td><td>Microcytic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001959<a name=\"hpo-HP.580001959\"> </a></td><td>Polydipsia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001994<a name=\"hpo-HP.580001994\"> </a></td><td>Renal Fanconi syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002134<a name=\"hpo-HP.580002134\"> </a></td><td>Abnormality of the basal ganglia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002188<a name=\"hpo-HP.580002188\"> </a></td><td>Delayed CNS myelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0002908<a name=\"hpo-HP.580002908\"> </a></td><td>Conjugated hyperbilirubinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003774<a name=\"hpo-HP.580003774\"> </a></td><td>Stage 5 chronic kidney disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0010700<a name=\"hpo-HP.580010700\"> </a></td><td>obsolete Total cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000193<a name=\"hpo-HP.580000193\"> </a></td><td>Bifid uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000219<a name=\"hpo-HP.580000219\"> </a></td><td>Thin upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000426<a name=\"hpo-HP.580000426\"> </a></td><td>Prominent nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000452<a name=\"hpo-HP.580000452\"> </a></td><td>Choanal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000490<a name=\"hpo-HP.580000490\"> </a></td><td>Deeply set eye</td></tr><tr><td style=\"white-space:nowrap\">HP:0000540<a name=\"hpo-HP.580000540\"> </a></td><td>Hypermetropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000579<a name=\"hpo-HP.580000579\"> </a></td><td>Nasolacrimal duct obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0000684<a name=\"hpo-HP.580000684\"> </a></td><td>Delayed eruption of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000960<a name=\"hpo-HP.580000960\"> </a></td><td>Sacral dimple</td></tr><tr><td style=\"white-space:nowrap\">HP:0000998<a name=\"hpo-HP.580000998\"> </a></td><td>Hypertrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001643<a name=\"hpo-HP.580001643\"> </a></td><td>Patent ductus arteriosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010813<a name=\"hpo-HP.580010813\"> </a></td><td>Abnormal number of hair whorls</td></tr><tr><td style=\"white-space:nowrap\">HP:0012384<a name=\"hpo-HP.580012384\"> </a></td><td>Rhinitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012745<a name=\"hpo-HP.580012745\"> </a></td><td>Short palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000359<a name=\"hpo-HP.580000359\"> </a></td><td>Abnormality of the inner ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000429<a name=\"hpo-HP.580000429\"> </a></td><td>Abnormality of the nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000436<a name=\"hpo-HP.580000436\"> </a></td><td>Abnormality of the nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000499<a name=\"hpo-HP.580000499\"> </a></td><td>Abnormal eyelash morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000534<a name=\"hpo-HP.580000534\"> </a></td><td>Abnormal eyebrow morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000951<a name=\"hpo-HP.580000951\"> </a></td><td>Abnormality of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001000<a name=\"hpo-HP.580001000\"> </a></td><td>Abnormality of skin pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001597<a name=\"hpo-HP.580001597\"> </a></td><td>Abnormality of the nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0006483<a name=\"hpo-HP.580006483\"> </a></td><td>Abnormal number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009929<a name=\"hpo-HP.580009929\"> </a></td><td>Abnormality of the columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0011119<a name=\"hpo-HP.580011119\"> </a></td><td>Abnormality of the nasal dorsum</td></tr><tr><td style=\"white-space:nowrap\">HP:0012808<a name=\"hpo-HP.580012808\"> </a></td><td>Abnormal nasal base</td></tr><tr><td style=\"white-space:nowrap\">HP:0100490<a name=\"hpo-HP.580100490\"> </a></td><td>Camptodactyly of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0000964<a name=\"hpo-HP.580000964\"> </a></td><td>Eczema</td></tr><tr><td style=\"white-space:nowrap\">HP:0004442<a name=\"hpo-HP.580004442\"> </a></td><td>Sagittal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000414<a name=\"hpo-HP.580000414\"> </a></td><td>Bulbous nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0003180<a name=\"hpo-HP.580003180\"> </a></td><td>Flat acetabular roof</td></tr><tr><td style=\"white-space:nowrap\">HP:0000422<a name=\"hpo-HP.580000422\"> </a></td><td>Abnormality of the nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000614<a name=\"hpo-HP.580000614\"> </a></td><td>Abnormal nasolacrimal system morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001167<a name=\"hpo-HP.580001167\"> </a></td><td>Abnormality of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0001595<a name=\"hpo-HP.580001595\"> </a></td><td>Abnormal hair morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012373<a name=\"hpo-HP.580012373\"> </a></td><td>Abnormal eye physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001655<a name=\"hpo-HP.580001655\"> </a></td><td>Patent foramen ovale</td></tr><tr><td style=\"white-space:nowrap\">HP:0001647<a name=\"hpo-HP.580001647\"> </a></td><td>Bicuspid aortic valve</td></tr><tr><td style=\"white-space:nowrap\">HP:0000574<a name=\"hpo-HP.580000574\"> </a></td><td>Thick eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0001169<a name=\"hpo-HP.580001169\"> </a></td><td>Broad palm</td></tr><tr><td style=\"white-space:nowrap\">HP:0006471<a name=\"hpo-HP.580006471\"> </a></td><td>Fixed elbow flexion</td></tr><tr><td style=\"white-space:nowrap\">HP:0008689<a name=\"hpo-HP.580008689\"> </a></td><td>Bilateral cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011304<a name=\"hpo-HP.580011304\"> </a></td><td>Broad thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0005110<a name=\"hpo-HP.580005110\"> </a></td><td>Atrial fibrillation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001633<a name=\"hpo-HP.580001633\"> </a></td><td>Abnormal mitral valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001641<a name=\"hpo-HP.580001641\"> </a></td><td>Abnormal pulmonary valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001702<a name=\"hpo-HP.580001702\"> </a></td><td>Abnormal tricuspid valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000012<a name=\"hpo-HP.580000012\"> </a></td><td>Urinary urgency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000020<a name=\"hpo-HP.580000020\"> </a></td><td>Urinary incontinence</td></tr><tr><td style=\"white-space:nowrap\">HP:0000131<a name=\"hpo-HP.580000131\"> </a></td><td>Uterine leiomyoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000132<a name=\"hpo-HP.580000132\"> </a></td><td>Menorrhagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000138<a name=\"hpo-HP.580000138\"> </a></td><td>Ovarian cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0000853<a name=\"hpo-HP.580000853\"> </a></td><td>Goiter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000953<a name=\"hpo-HP.580000953\"> </a></td><td>Hyperpigmentation of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001061<a name=\"hpo-HP.580001061\"> </a></td><td>Acne</td></tr><tr><td style=\"white-space:nowrap\">HP:0002315<a name=\"hpo-HP.580002315\"> </a></td><td>Headache</td></tr><tr><td style=\"white-space:nowrap\">HP:0004324<a name=\"hpo-HP.580004324\"> </a></td><td>Increased body weight</td></tr><tr><td style=\"white-space:nowrap\">HP:0000069<a name=\"hpo-HP.580000069\"> </a></td><td>Abnormality of the ureter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000077<a name=\"hpo-HP.580000077\"> </a></td><td>Abnormality of the kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0000759<a name=\"hpo-HP.580000759\"> </a></td><td>Abnormal peripheral nervous system morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008069<a name=\"hpo-HP.580008069\"> </a></td><td>Neoplasm of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011276<a name=\"hpo-HP.580011276\"> </a></td><td>Vascular skin abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0000705<a name=\"hpo-HP.580000705\"> </a></td><td>Amelogenesis imperfecta</td></tr><tr><td style=\"white-space:nowrap\">HP:0001256<a name=\"hpo-HP.580001256\"> </a></td><td>Intellectual disability, mild</td></tr><tr><td style=\"white-space:nowrap\">HP:0000325<a name=\"hpo-HP.580000325\"> </a></td><td>Triangular face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000160<a name=\"hpo-HP.580000160\"> </a></td><td>Narrow mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009487<a name=\"hpo-HP.580009487\"> </a></td><td>Ulnar deviation of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0001249<a name=\"hpo-HP.580001249\"> </a></td><td>Intellectual disability</td></tr><tr><td style=\"white-space:nowrap\">HP:0008064<a name=\"hpo-HP.580008064\"> </a></td><td>Ichthyosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000311<a name=\"hpo-HP.580000311\"> </a></td><td>Round face</td></tr><tr><td style=\"white-space:nowrap\">HP:0001653<a name=\"hpo-HP.580001653\"> </a></td><td>Mitral regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001771<a name=\"hpo-HP.580001771\"> </a></td><td>Achilles tendon contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0012032<a name=\"hpo-HP.580012032\"> </a></td><td>Lipoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0012368<a name=\"hpo-HP.580012368\"> </a></td><td>Flat face</td></tr><tr><td style=\"white-space:nowrap\">HP:0030053<a name=\"hpo-HP.580030053\"> </a></td><td>Stiff skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011124<a name=\"hpo-HP.580011124\"> </a></td><td>Abnormality of epidermal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011097<a name=\"hpo-HP.580011097\"> </a></td><td>Epileptic spasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000407<a name=\"hpo-HP.580000407\"> </a></td><td>Sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000331<a name=\"hpo-HP.580000331\"> </a></td><td>Short chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000340<a name=\"hpo-HP.580000340\"> </a></td><td>Sloping forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0000486<a name=\"hpo-HP.580000486\"> </a></td><td>Strabismus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000713<a name=\"hpo-HP.580000713\"> </a></td><td>Agitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000802<a name=\"hpo-HP.580000802\"> </a></td><td>Impotence</td></tr><tr><td style=\"white-space:nowrap\">HP:0001272<a name=\"hpo-HP.580001272\"> </a></td><td>Cerebellar atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001276<a name=\"hpo-HP.580001276\"> </a></td><td>Hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001321<a name=\"hpo-HP.580001321\"> </a></td><td>Cerebellar hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001322<a name=\"hpo-HP.580001322\"> </a></td><td>obsolete Brain very small</td></tr><tr><td style=\"white-space:nowrap\">HP:0002061<a name=\"hpo-HP.580002061\"> </a></td><td>Lower limb spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002529<a name=\"hpo-HP.580002529\"> </a></td><td>Neuronal loss in central nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0002540<a name=\"hpo-HP.580002540\"> </a></td><td>Inability to walk</td></tr><tr><td style=\"white-space:nowrap\">HP:0005484<a name=\"hpo-HP.580005484\"> </a></td><td>Postnatal microcephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0012850<a name=\"hpo-HP.580012850\"> </a></td><td>Small intestinal dysmotility</td></tr><tr><td style=\"white-space:nowrap\">HP:0000504<a name=\"hpo-HP.580000504\"> </a></td><td>Abnormality of vision</td></tr><tr><td style=\"white-space:nowrap\">HP:0002118<a name=\"hpo-HP.580002118\"> </a></td><td>Abnormality of the cerebral ventricles</td></tr><tr><td style=\"white-space:nowrap\">HP:0002363<a name=\"hpo-HP.580002363\"> </a></td><td>Abnormality of brainstem morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0010651<a name=\"hpo-HP.580010651\"> </a></td><td>Abnormal meningeal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100024<a name=\"hpo-HP.580100024\"> </a></td><td>Conspicuously happy disposition</td></tr><tr><td style=\"white-space:nowrap\">HP:0002538<a name=\"hpo-HP.580002538\"> </a></td><td>Abnormality of the cerebral cortex</td></tr><tr><td style=\"white-space:nowrap\">HP:0000054<a name=\"hpo-HP.580000054\"> </a></td><td>Micropenis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000215<a name=\"hpo-HP.580000215\"> </a></td><td>Thick upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000293<a name=\"hpo-HP.580000293\"> </a></td><td>Full cheeks</td></tr><tr><td style=\"white-space:nowrap\">HP:0000349<a name=\"hpo-HP.580000349\"> </a></td><td>Widow's peak</td></tr><tr><td style=\"white-space:nowrap\">HP:0000444<a name=\"hpo-HP.580000444\"> </a></td><td>Convex nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000506<a name=\"hpo-HP.580000506\"> </a></td><td>Telecanthus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000592<a name=\"hpo-HP.580000592\"> </a></td><td>Blue sclerae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000691<a name=\"hpo-HP.580000691\"> </a></td><td>Microdontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000698<a name=\"hpo-HP.580000698\"> </a></td><td>Conical tooth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002000<a name=\"hpo-HP.580002000\"> </a></td><td>Short columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0002097<a name=\"hpo-HP.580002097\"> </a></td><td>Emphysema</td></tr><tr><td style=\"white-space:nowrap\">HP:0002209<a name=\"hpo-HP.580002209\"> </a></td><td>Sparse scalp hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002816<a name=\"hpo-HP.580002816\"> </a></td><td>Genu recurvatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0005116<a name=\"hpo-HP.580005116\"> </a></td><td>Arterial tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0007957<a name=\"hpo-HP.580007957\"> </a></td><td>Corneal opacity</td></tr><tr><td style=\"white-space:nowrap\">HP:0008070<a name=\"hpo-HP.580008070\"> </a></td><td>Sparse hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0009623<a name=\"hpo-HP.580009623\"> </a></td><td>Proximal placement of thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0010055<a name=\"hpo-HP.580010055\"> </a></td><td>Broad hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0011318<a name=\"hpo-HP.580011318\"> </a></td><td>Bicoronal synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011968<a name=\"hpo-HP.580011968\"> </a></td><td>Feeding difficulties</td></tr><tr><td style=\"white-space:nowrap\">HP:0200067<a name=\"hpo-HP.580200067\"> </a></td><td>Recurrent spontaneous abortion</td></tr><tr><td style=\"white-space:nowrap\">HP:0011819<a name=\"hpo-HP.580011819\"> </a></td><td>Submucous cleft soft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000268<a name=\"hpo-HP.580000268\"> </a></td><td>Dolichocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0003302<a name=\"hpo-HP.580003302\"> </a></td><td>Spondylolisthesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000582<a name=\"hpo-HP.580000582\"> </a></td><td>Upslanted palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000952<a name=\"hpo-HP.580000952\"> </a></td><td>Jaundice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001298<a name=\"hpo-HP.580001298\"> </a></td><td>Encephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001396<a name=\"hpo-HP.580001396\"> </a></td><td>Cholestasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002059<a name=\"hpo-HP.580002059\"> </a></td><td>Cerebral atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002171<a name=\"hpo-HP.580002171\"> </a></td><td>Gliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002240<a name=\"hpo-HP.580002240\"> </a></td><td>Hepatomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002353<a name=\"hpo-HP.580002353\"> </a></td><td>EEG abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0002446<a name=\"hpo-HP.580002446\"> </a></td><td>Astrocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003287<a name=\"hpo-HP.580003287\"> </a></td><td>Abnormality of mitochondrial metabolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0011449<a name=\"hpo-HP.580011449\"> </a></td><td>Knee clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012852<a name=\"hpo-HP.580012852\"> </a></td><td>Hepatic bridging fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100626<a name=\"hpo-HP.580100626\"> </a></td><td>Chronic hepatic failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000385<a name=\"hpo-HP.580000385\"> </a></td><td>Small earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0009748<a name=\"hpo-HP.580009748\"> </a></td><td>Large earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0000157<a name=\"hpo-HP.580000157\"> </a></td><td>Abnormality of the tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0000172<a name=\"hpo-HP.580000172\"> </a></td><td>Abnormality of the uvula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000174<a name=\"hpo-HP.580000174\"> </a></td><td>Abnormal palate morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000306<a name=\"hpo-HP.580000306\"> </a></td><td>Abnormality of the chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0004408<a name=\"hpo-HP.580004408\"> </a></td><td>Abnormality of the sense of smell</td></tr><tr><td style=\"white-space:nowrap\">HP:0009912<a name=\"hpo-HP.580009912\"> </a></td><td>Abnormality of the tragus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000537<a name=\"hpo-HP.580000537\"> </a></td><td>Epicanthus inversus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000565<a name=\"hpo-HP.580000565\"> </a></td><td>Esotropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000752<a name=\"hpo-HP.580000752\"> </a></td><td>Hyperactivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003186<a name=\"hpo-HP.580003186\"> </a></td><td>Inverted nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0012503<a name=\"hpo-HP.580012503\"> </a></td><td>Abnormality of the pituitary gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0100710<a name=\"hpo-HP.580100710\"> </a></td><td>Impulsivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000357<a name=\"hpo-HP.580000357\"> </a></td><td>Abnormal location of ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0000820<a name=\"hpo-HP.580000820\"> </a></td><td>Abnormality of the thyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000828<a name=\"hpo-HP.580000828\"> </a></td><td>Abnormality of the parathyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000834<a name=\"hpo-HP.580000834\"> </a></td><td>Abnormality of the adrenal glands</td></tr><tr><td style=\"white-space:nowrap\">HP:0012093<a name=\"hpo-HP.580012093\"> </a></td><td>Abnormality of endocrine pancreas physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000269<a name=\"hpo-HP.580000269\"> </a></td><td>Prominent occiput</td></tr><tr><td style=\"white-space:nowrap\">HP:0000535<a name=\"hpo-HP.580000535\"> </a></td><td>Sparse and thin eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000639<a name=\"hpo-HP.580000639\"> </a></td><td>Nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000718<a name=\"hpo-HP.580000718\"> </a></td><td>Aggressive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000957<a name=\"hpo-HP.580000957\"> </a></td><td>Cafe-au-lait spot</td></tr><tr><td style=\"white-space:nowrap\">HP:0000256<a name=\"hpo-HP.580000256\"> </a></td><td>Macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000750<a name=\"hpo-HP.580000750\"> </a></td><td>Delayed speech and language development</td></tr><tr><td style=\"white-space:nowrap\">HP:0000963<a name=\"hpo-HP.580000963\"> </a></td><td>Thin skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0001260<a name=\"hpo-HP.580001260\"> </a></td><td>Dysarthria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002194<a name=\"hpo-HP.580002194\"> </a></td><td>Delayed gross motor development</td></tr><tr><td style=\"white-space:nowrap\">HP:0003196<a name=\"hpo-HP.580003196\"> </a></td><td>Short nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0001155<a name=\"hpo-HP.580001155\"> </a></td><td>Abnormality of the hand</td></tr><tr><td style=\"white-space:nowrap\">HP:0100022<a name=\"hpo-HP.580100022\"> </a></td><td>Abnormality of movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010862<a name=\"hpo-HP.580010862\"> </a></td><td>Delayed fine motor development</td></tr><tr><td style=\"white-space:nowrap\">HP:0000343<a name=\"hpo-HP.580000343\"> </a></td><td>Long philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000717<a name=\"hpo-HP.580000717\"> </a></td><td>Autism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001883<a name=\"hpo-HP.580001883\"> </a></td><td>Talipes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002553<a name=\"hpo-HP.580002553\"> </a></td><td>Highly arched eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0007488<a name=\"hpo-HP.580007488\"> </a></td><td>Diffuse skin atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000822<a name=\"hpo-HP.580000822\"> </a></td><td>Hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001278<a name=\"hpo-HP.580001278\"> </a></td><td>Orthostatic hypotension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001944<a name=\"hpo-HP.580001944\"> </a></td><td>Dehydration</td></tr><tr><td style=\"white-space:nowrap\">HP:0001945<a name=\"hpo-HP.580001945\"> </a></td><td>Fever</td></tr><tr><td style=\"white-space:nowrap\">HP:0002019<a name=\"hpo-HP.580002019\"> </a></td><td>Constipation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002020<a name=\"hpo-HP.580002020\"> </a></td><td>Gastroesophageal reflux</td></tr><tr><td style=\"white-space:nowrap\">HP:0002027<a name=\"hpo-HP.580002027\"> </a></td><td>Abdominal pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0002718<a name=\"hpo-HP.580002718\"> </a></td><td>Recurrent bacterial infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0002841<a name=\"hpo-HP.580002841\"> </a></td><td>Recurrent fungal infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0004395<a name=\"hpo-HP.580004395\"> </a></td><td>Malnutrition</td></tr><tr><td style=\"white-space:nowrap\">HP:0009830<a name=\"hpo-HP.580009830\"> </a></td><td>Peripheral neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000126<a name=\"hpo-HP.580000126\"> </a></td><td>Hydronephrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000519<a name=\"hpo-HP.580000519\"> </a></td><td>Developmental cataract</td></tr><tr><td style=\"white-space:nowrap\">HP:0000648<a name=\"hpo-HP.580000648\"> </a></td><td>Optic atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001053<a name=\"hpo-HP.580001053\"> </a></td><td>Hypopigmented skin patches</td></tr><tr><td style=\"white-space:nowrap\">HP:0001087<a name=\"hpo-HP.580001087\"> </a></td><td>Developmental glaucoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0002119<a name=\"hpo-HP.580002119\"> </a></td><td>Ventriculomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002280<a name=\"hpo-HP.580002280\"> </a></td><td>Enlarged cisterna magna</td></tr><tr><td style=\"white-space:nowrap\">HP:0003298<a name=\"hpo-HP.580003298\"> </a></td><td>Spina bifida occulta</td></tr><tr><td style=\"white-space:nowrap\">HP:0004467<a name=\"hpo-HP.580004467\"> </a></td><td>Preauricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0008511<a name=\"hpo-HP.580008511\"> </a></td><td>Central posterior corneal opacity</td></tr><tr><td style=\"white-space:nowrap\">HP:0010780<a name=\"hpo-HP.580010780\"> </a></td><td>Hyperacusis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030048<a name=\"hpo-HP.580030048\"> </a></td><td>Colpocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0100335<a name=\"hpo-HP.580100335\"> </a></td><td>Non-midline cleft lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000525<a name=\"hpo-HP.580000525\"> </a></td><td>Abnormality iris morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002719<a name=\"hpo-HP.580002719\"> </a></td><td>Recurrent infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0000153<a name=\"hpo-HP.580000153\"> </a></td><td>Abnormality of the mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001903<a name=\"hpo-HP.580001903\"> </a></td><td>Anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002094<a name=\"hpo-HP.580002094\"> </a></td><td>Dyspnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002206<a name=\"hpo-HP.580002206\"> </a></td><td>Pulmonary fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002789<a name=\"hpo-HP.580002789\"> </a></td><td>Tachypnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002793<a name=\"hpo-HP.580002793\"> </a></td><td>Abnormal pattern of respiration</td></tr><tr><td style=\"white-space:nowrap\">HP:0003565<a name=\"hpo-HP.580003565\"> </a></td><td>Elevated erythrocyte sedimentation rate</td></tr><tr><td style=\"white-space:nowrap\">HP:0006517<a name=\"hpo-HP.580006517\"> </a></td><td>Intraalveolar phospholipid accumulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0006530<a name=\"hpo-HP.580006530\"> </a></td><td>Interstitial pulmonary abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0100759<a name=\"hpo-HP.580100759\"> </a></td><td>Clubbing of fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0002103<a name=\"hpo-HP.580002103\"> </a></td><td>Abnormal pleura morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001596<a name=\"hpo-HP.580001596\"> </a></td><td>Alopecia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001882<a name=\"hpo-HP.580001882\"> </a></td><td>Leukopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002013<a name=\"hpo-HP.580002013\"> </a></td><td>Vomiting</td></tr><tr><td style=\"white-space:nowrap\">HP:0002028<a name=\"hpo-HP.580002028\"> </a></td><td>Chronic diarrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002573<a name=\"hpo-HP.580002573\"> </a></td><td>Hematochezia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002960<a name=\"hpo-HP.580002960\"> </a></td><td>Autoimmunity</td></tr><tr><td style=\"white-space:nowrap\">HP:0005387<a name=\"hpo-HP.580005387\"> </a></td><td>Combined immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0011109<a name=\"hpo-HP.580011109\"> </a></td><td>Chronic sinusitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004429<a name=\"hpo-HP.580004429\"> </a></td><td>Recurrent viral infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0000280<a name=\"hpo-HP.580000280\"> </a></td><td>Coarse facial features</td></tr><tr><td style=\"white-space:nowrap\">HP:0000294<a name=\"hpo-HP.580000294\"> </a></td><td>Low anterior hairline</td></tr><tr><td style=\"white-space:nowrap\">HP:0000577<a name=\"hpo-HP.580000577\"> </a></td><td>Exotropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001873<a name=\"hpo-HP.580001873\"> </a></td><td>Thrombocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002011<a name=\"hpo-HP.580002011\"> </a></td><td>Morphological central nervous system abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0006610<a name=\"hpo-HP.580006610\"> </a></td><td>Wide intermamillary distance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011231<a name=\"hpo-HP.580011231\"> </a></td><td>Prominent eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0012718<a name=\"hpo-HP.580012718\"> </a></td><td>Morphological abnormality of the gastrointestinal tract</td></tr><tr><td style=\"white-space:nowrap\">HP:0002024<a name=\"hpo-HP.580002024\"> </a></td><td>Malabsorption</td></tr><tr><td style=\"white-space:nowrap\">HP:0001394<a name=\"hpo-HP.580001394\"> </a></td><td>Cirrhosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001414<a name=\"hpo-HP.580001414\"> </a></td><td>Microvesicular hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001403<a name=\"hpo-HP.580001403\"> </a></td><td>Macrovesicular hepatic steatosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001410<a name=\"hpo-HP.580001410\"> </a></td><td>Decreased liver function</td></tr><tr><td style=\"white-space:nowrap\">HP:0001409<a name=\"hpo-HP.580001409\"> </a></td><td>Portal hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0001744<a name=\"hpo-HP.580001744\"> </a></td><td>Splenomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0003394<a name=\"hpo-HP.580003394\"> </a></td><td>Muscle spasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003750<a name=\"hpo-HP.580003750\"> </a></td><td>Increased muscle fatiguability</td></tr><tr><td style=\"white-space:nowrap\">HP:0002123<a name=\"hpo-HP.580002123\"> </a></td><td>Generalized myoclonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0002219<a name=\"hpo-HP.580002219\"> </a></td><td>Facial hypertrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000831<a name=\"hpo-HP.580000831\"> </a></td><td>Insulin-resistant diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001891<a name=\"hpo-HP.580001891\"> </a></td><td>Iron deficiency anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001264<a name=\"hpo-HP.580001264\"> </a></td><td>Spastic diplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002313<a name=\"hpo-HP.580002313\"> </a></td><td>Spastic paraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001347<a name=\"hpo-HP.580001347\"> </a></td><td>Hyperreflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002460<a name=\"hpo-HP.580002460\"> </a></td><td>Distal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000763<a name=\"hpo-HP.580000763\"> </a></td><td>Sensory neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001268<a name=\"hpo-HP.580001268\"> </a></td><td>Mental deterioration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002169<a name=\"hpo-HP.580002169\"> </a></td><td>Clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001332<a name=\"hpo-HP.580001332\"> </a></td><td>Dystonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100716<a name=\"hpo-HP.580100716\"> </a></td><td>Self-injurious behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000602<a name=\"hpo-HP.580000602\"> </a></td><td>Ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001251<a name=\"hpo-HP.580001251\"> </a></td><td>Ataxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000776<a name=\"hpo-HP.580000776\"> </a></td><td>Congenital diaphragmatic hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000410<a name=\"hpo-HP.580000410\"> </a></td><td>Mixed hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000510<a name=\"hpo-HP.580000510\"> </a></td><td>Rod-cone dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0004437<a name=\"hpo-HP.580004437\"> </a></td><td>Cranial hyperostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011001<a name=\"hpo-HP.580011001\"> </a></td><td>Increased bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0000956<a name=\"hpo-HP.580000956\"> </a></td><td>Acanthosis nigricans</td></tr><tr><td style=\"white-space:nowrap\">HP:0000958<a name=\"hpo-HP.580000958\"> </a></td><td>Dry skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000580<a name=\"hpo-HP.580000580\"> </a></td><td>Pigmentary retinopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000649<a name=\"hpo-HP.580000649\"> </a></td><td>Abnormality of visual evoked potentials</td></tr><tr><td style=\"white-space:nowrap\">HP:0000657<a name=\"hpo-HP.580000657\"> </a></td><td>Oculomotor apraxia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000479<a name=\"hpo-HP.580000479\"> </a></td><td>Abnormal retinal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001317<a name=\"hpo-HP.580001317\"> </a></td><td>Abnormal cerebellum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001533<a name=\"hpo-HP.580001533\"> </a></td><td>Slender build</td></tr><tr><td style=\"white-space:nowrap\">HP:0001629<a name=\"hpo-HP.580001629\"> </a></td><td>Ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0000703<a name=\"hpo-HP.580000703\"> </a></td><td>Dentinogenesis imperfecta</td></tr><tr><td style=\"white-space:nowrap\">HP:0000914<a name=\"hpo-HP.580000914\"> </a></td><td>Shield chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0001500<a name=\"hpo-HP.580001500\"> </a></td><td>Broad finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0003086<a name=\"hpo-HP.580003086\"> </a></td><td>Acromesomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003416<a name=\"hpo-HP.580003416\"> </a></td><td>Spinal canal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002815<a name=\"hpo-HP.580002815\"> </a></td><td>Abnormality of the knee</td></tr><tr><td style=\"white-space:nowrap\">HP:0002992<a name=\"hpo-HP.580002992\"> </a></td><td>Abnormality of tibia morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001639<a name=\"hpo-HP.580001639\"> </a></td><td>Hypertrophic cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003236<a name=\"hpo-HP.580003236\"> </a></td><td>Elevated serum creatine kinase</td></tr><tr><td style=\"white-space:nowrap\">HP:0001369<a name=\"hpo-HP.580001369\"> </a></td><td>Arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003560<a name=\"hpo-HP.580003560\"> </a></td><td>Muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003974<a name=\"hpo-HP.580003974\"> </a></td><td>Absent radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0002818<a name=\"hpo-HP.580002818\"> </a></td><td>Abnormality of the radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0001561<a name=\"hpo-HP.580001561\"> </a></td><td>Polyhydramnios</td></tr><tr><td style=\"white-space:nowrap\">HP:0002299<a name=\"hpo-HP.580002299\"> </a></td><td>Brittle hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002208<a name=\"hpo-HP.580002208\"> </a></td><td>Coarse hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0002213<a name=\"hpo-HP.580002213\"> </a></td><td>Fine hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000522<a name=\"hpo-HP.580000522\"> </a></td><td>Alacrima</td></tr><tr><td style=\"white-space:nowrap\">HP:0100704<a name=\"hpo-HP.580100704\"> </a></td><td>Cerebral visual impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0012713<a name=\"hpo-HP.580012713\"> </a></td><td>Moderate hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002307<a name=\"hpo-HP.580002307\"> </a></td><td>Drooling</td></tr><tr><td style=\"white-space:nowrap\">HP:0002714<a name=\"hpo-HP.580002714\"> </a></td><td>Downturned corners of mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000191<a name=\"hpo-HP.580000191\"> </a></td><td>Accessory oral frenulum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000158<a name=\"hpo-HP.580000158\"> </a></td><td>Macroglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012020<a name=\"hpo-HP.580012020\"> </a></td><td>Right aortic arch</td></tr><tr><td style=\"white-space:nowrap\">HP:0002104<a name=\"hpo-HP.580002104\"> </a></td><td>Apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0000598<a name=\"hpo-HP.580000598\"> </a></td><td>Abnormality of the ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0007874<a name=\"hpo-HP.580007874\"> </a></td><td>Almond-shaped palpebral fissure</td></tr><tr><td style=\"white-space:nowrap\">HP:0010804<a name=\"hpo-HP.580010804\"> </a></td><td>Tented upper lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000885<a name=\"hpo-HP.580000885\"> </a></td><td>Broad ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000768<a name=\"hpo-HP.580000768\"> </a></td><td>Pectus carinatum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001680<a name=\"hpo-HP.580001680\"> </a></td><td>Coarctation of aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0000687<a name=\"hpo-HP.580000687\"> </a></td><td>Widely spaced teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000047<a name=\"hpo-HP.580000047\"> </a></td><td>Hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0001943<a name=\"hpo-HP.580001943\"> </a></td><td>Hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012369<a name=\"hpo-HP.580012369\"> </a></td><td>Abnormality of malar bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0009900<a name=\"hpo-HP.580009900\"> </a></td><td>Unilateral deafness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000023<a name=\"hpo-HP.580000023\"> </a></td><td>Inguinal hernia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000074<a name=\"hpo-HP.580000074\"> </a></td><td>Ureteropelvic junction obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001800<a name=\"hpo-HP.580001800\"> </a></td><td>Hypoplastic toenails</td></tr><tr><td style=\"white-space:nowrap\">HP:0001804<a name=\"hpo-HP.580001804\"> </a></td><td>Hypoplastic fingernail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002949<a name=\"hpo-HP.580002949\"> </a></td><td>Fused cervical vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0008050<a name=\"hpo-HP.580008050\"> </a></td><td>Abnormality of the palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0008577<a name=\"hpo-HP.580008577\"> </a></td><td>Underfolded helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0008589<a name=\"hpo-HP.580008589\"> </a></td><td>Hypoplastic helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0010863<a name=\"hpo-HP.580010863\"> </a></td><td>Receptive language delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0002282<a name=\"hpo-HP.580002282\"> </a></td><td>Gray matter heterotopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002085<a name=\"hpo-HP.580002085\"> </a></td><td>Occipital encephalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0001057<a name=\"hpo-HP.580001057\"> </a></td><td>Aplasia cutis congenita</td></tr><tr><td style=\"white-space:nowrap\">HP:0000211<a name=\"hpo-HP.580000211\"> </a></td><td>Trismus</td></tr><tr><td style=\"white-space:nowrap\">HP:0008422<a name=\"hpo-HP.580008422\"> </a></td><td>Vertebral wedging</td></tr><tr><td style=\"white-space:nowrap\">HP:0003170<a name=\"hpo-HP.580003170\"> </a></td><td>Abnormality of the acetabulum</td></tr><tr><td style=\"white-space:nowrap\">HP:0003272<a name=\"hpo-HP.580003272\"> </a></td><td>Abnormality of the hip bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0003028<a name=\"hpo-HP.580003028\"> </a></td><td>Abnormality of the ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0003301<a name=\"hpo-HP.580003301\"> </a></td><td>Irregular vertebral endplates</td></tr><tr><td style=\"white-space:nowrap\">HP:0010508<a name=\"hpo-HP.580010508\"> </a></td><td>Metatarsus valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0009811<a name=\"hpo-HP.580009811\"> </a></td><td>Abnormality of the elbow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000736<a name=\"hpo-HP.580000736\"> </a></td><td>Short attention span</td></tr><tr><td style=\"white-space:nowrap\">HP:0002912<a name=\"hpo-HP.580002912\"> </a></td><td>Methylmalonic acidemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001941<a name=\"hpo-HP.580001941\"> </a></td><td>Acidosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001992<a name=\"hpo-HP.580001992\"> </a></td><td>Organic aciduria</td></tr><tr><td style=\"white-space:nowrap\">HP:0009027<a name=\"hpo-HP.580009027\"> </a></td><td>Foot dorsiflexor weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002063<a name=\"hpo-HP.580002063\"> </a></td><td>Rigidity</td></tr><tr><td style=\"white-space:nowrap\">HP:0000384<a name=\"hpo-HP.580000384\"> </a></td><td>Preauricular skin tag</td></tr><tr><td style=\"white-space:nowrap\">HP:0200046<a name=\"hpo-HP.580200046\"> </a></td><td>Cat cry</td></tr><tr><td style=\"white-space:nowrap\">HP:0001357<a name=\"hpo-HP.580001357\"> </a></td><td>Plagiocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000670<a name=\"hpo-HP.580000670\"> </a></td><td>Carious teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0011090<a name=\"hpo-HP.580011090\"> </a></td><td>Fused teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0012810<a name=\"hpo-HP.580012810\"> </a></td><td>Wide nasal base</td></tr><tr><td style=\"white-space:nowrap\">HP:0010296<a name=\"hpo-HP.580010296\"> </a></td><td>Ankyloglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001636<a name=\"hpo-HP.580001636\"> </a></td><td>Tetralogy of Fallot</td></tr><tr><td style=\"white-space:nowrap\">HP:0001305<a name=\"hpo-HP.580001305\"> </a></td><td>Dandy-Walker malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000238<a name=\"hpo-HP.580000238\"> </a></td><td>Hydrocephalus</td></tr><tr><td style=\"white-space:nowrap\">HP:0005469<a name=\"hpo-HP.580005469\"> </a></td><td>Flat occiput</td></tr><tr><td style=\"white-space:nowrap\">HP:0000270<a name=\"hpo-HP.580000270\"> </a></td><td>Delayed cranial suture closure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000239<a name=\"hpo-HP.580000239\"> </a></td><td>Large fontanelles</td></tr><tr><td style=\"white-space:nowrap\">HP:0010537<a name=\"hpo-HP.580010537\"> </a></td><td>Wide cranial sutures</td></tr><tr><td style=\"white-space:nowrap\">HP:0002217<a name=\"hpo-HP.580002217\"> </a></td><td>Slow-growing hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000587<a name=\"hpo-HP.580000587\"> </a></td><td>Abnormality of the optic nerve</td></tr><tr><td style=\"white-space:nowrap\">HP:0005989<a name=\"hpo-HP.580005989\"> </a></td><td>Redundant neck skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010775<a name=\"hpo-HP.580010775\"> </a></td><td>Vascular ring</td></tr><tr><td style=\"white-space:nowrap\">HP:0002779<a name=\"hpo-HP.580002779\"> </a></td><td>Tracheomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002827<a name=\"hpo-HP.580002827\"> </a></td><td>Hip dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001302<a name=\"hpo-HP.580001302\"> </a></td><td>Pachygyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0007362<a name=\"hpo-HP.580007362\"> </a></td><td>Aplasia/Hypoplasia of the brainstem</td></tr><tr><td style=\"white-space:nowrap\">HP:0001558<a name=\"hpo-HP.580001558\"> </a></td><td>Decreased fetal movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010878<a name=\"hpo-HP.580010878\"> </a></td><td>Fetal cystic hygroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0011398<a name=\"hpo-HP.580011398\"> </a></td><td>Central hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002071<a name=\"hpo-HP.580002071\"> </a></td><td>Abnormality of extrapyramidal motor function</td></tr><tr><td style=\"white-space:nowrap\">HP:0000826<a name=\"hpo-HP.580000826\"> </a></td><td>Precocious puberty</td></tr><tr><td style=\"white-space:nowrap\">HP:0000014<a name=\"hpo-HP.580000014\"> </a></td><td>Abnormality of the bladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0005037<a name=\"hpo-HP.580005037\"> </a></td><td>Proximal radio-ulnar synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100543<a name=\"hpo-HP.580100543\"> </a></td><td>Cognitive impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000481<a name=\"hpo-HP.580000481\"> </a></td><td>Abnormal cornea morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000076<a name=\"hpo-HP.580000076\"> </a></td><td>Vesicoureteral reflux</td></tr><tr><td style=\"white-space:nowrap\">HP:0000297<a name=\"hpo-HP.580000297\"> </a></td><td>Facial hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000391<a name=\"hpo-HP.580000391\"> </a></td><td>Thickened helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0001162<a name=\"hpo-HP.580001162\"> </a></td><td>Postaxial hand polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001385<a name=\"hpo-HP.580001385\"> </a></td><td>Hip dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002342<a name=\"hpo-HP.580002342\"> </a></td><td>Intellectual disability, moderate</td></tr><tr><td style=\"white-space:nowrap\">HP:0003191<a name=\"hpo-HP.580003191\"> </a></td><td>Cleft ala nasi</td></tr><tr><td style=\"white-space:nowrap\">HP:0009765<a name=\"hpo-HP.580009765\"> </a></td><td>Low hanging columella</td></tr><tr><td style=\"white-space:nowrap\">HP:0010297<a name=\"hpo-HP.580010297\"> </a></td><td>Bifid tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0011330<a name=\"hpo-HP.580011330\"> </a></td><td>Metopic synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012804<a name=\"hpo-HP.580012804\"> </a></td><td>Corneal ulceration</td></tr><tr><td style=\"white-space:nowrap\">HP:0010485<a name=\"hpo-HP.580010485\"> </a></td><td>Hyperextensibility at elbow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000609<a name=\"hpo-HP.580000609\"> </a></td><td>Optic nerve hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001176<a name=\"hpo-HP.580001176\"> </a></td><td>Large hands</td></tr><tr><td style=\"white-space:nowrap\">HP:0004233<a name=\"hpo-HP.580004233\"> </a></td><td>Advanced ossification of carpal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0100842<a name=\"hpo-HP.580100842\"> </a></td><td>Septo-optic dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002034<a name=\"hpo-HP.580002034\"> </a></td><td>Abnormality of the rectum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002283<a name=\"hpo-HP.580002283\"> </a></td><td>Global brain atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003115<a name=\"hpo-HP.580003115\"> </a></td><td>Abnormal EKG</td></tr><tr><td style=\"white-space:nowrap\">HP:0002577<a name=\"hpo-HP.580002577\"> </a></td><td>Abnormal stomach morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002539<a name=\"hpo-HP.580002539\"> </a></td><td>Cortical dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006818<a name=\"hpo-HP.580006818\"> </a></td><td>4-layered lissencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000593<a name=\"hpo-HP.580000593\"> </a></td><td>Abnormal anterior chamber morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000179<a name=\"hpo-HP.580000179\"> </a></td><td>Thick lower lip vermilion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002002<a name=\"hpo-HP.580002002\"> </a></td><td>Deep philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0009931<a name=\"hpo-HP.580009931\"> </a></td><td>Enlarged naris</td></tr><tr><td style=\"white-space:nowrap\">HP:0002948<a name=\"hpo-HP.580002948\"> </a></td><td>Vertebral fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002937<a name=\"hpo-HP.580002937\"> </a></td><td>Hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0002308<a name=\"hpo-HP.580002308\"> </a></td><td>Arnold-Chiari malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011320<a name=\"hpo-HP.580011320\"> </a></td><td>Unilambdoid synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002781<a name=\"hpo-HP.580002781\"> </a></td><td>Upper airway obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001363<a name=\"hpo-HP.580001363\"> </a></td><td>Craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000204<a name=\"hpo-HP.580000204\"> </a></td><td>Cleft upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001738<a name=\"hpo-HP.580001738\"> </a></td><td>Exocrine pancreatic insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002823<a name=\"hpo-HP.580002823\"> </a></td><td>Abnormality of femur morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000823<a name=\"hpo-HP.580000823\"> </a></td><td>Delayed puberty</td></tr><tr><td style=\"white-space:nowrap\">HP:0100279<a name=\"hpo-HP.580100279\"> </a></td><td>Ulcerative colitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003834<a name=\"hpo-HP.580003834\"> </a></td><td>Shoulder dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001065<a name=\"hpo-HP.580001065\"> </a></td><td>Striae distensae</td></tr><tr><td style=\"white-space:nowrap\">HP:0000448<a name=\"hpo-HP.580000448\"> </a></td><td>Prominent nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0000554<a name=\"hpo-HP.580000554\"> </a></td><td>Uveitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001006<a name=\"hpo-HP.580001006\"> </a></td><td>obsolete Hypotrichosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000501<a name=\"hpo-HP.580000501\"> </a></td><td>Glaucoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0000262<a name=\"hpo-HP.580000262\"> </a></td><td>Turricephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000729<a name=\"hpo-HP.580000729\"> </a></td><td>Autistic behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0010800<a name=\"hpo-HP.580010800\"> </a></td><td>Absent cupid's bow</td></tr><tr><td style=\"white-space:nowrap\">HP:0010808<a name=\"hpo-HP.580010808\"> </a></td><td>Protruding tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0009927<a name=\"hpo-HP.580009927\"> </a></td><td>Aplasia of the nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0100539<a name=\"hpo-HP.580100539\"> </a></td><td>Periorbital edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000629<a name=\"hpo-HP.580000629\"> </a></td><td>Periorbital fullness</td></tr><tr><td style=\"white-space:nowrap\">HP:0000178<a name=\"hpo-HP.580000178\"> </a></td><td>Abnormality of lower lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000168<a name=\"hpo-HP.580000168\"> </a></td><td>Abnormality of the gingiva</td></tr><tr><td style=\"white-space:nowrap\">HP:0001022<a name=\"hpo-HP.580001022\"> </a></td><td>Albinism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000177<a name=\"hpo-HP.580000177\"> </a></td><td>Abnormality of upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001337<a name=\"hpo-HP.580001337\"> </a></td><td>Tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002135<a name=\"hpo-HP.580002135\"> </a></td><td>Basal ganglia calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0002352<a name=\"hpo-HP.580002352\"> </a></td><td>Leukoencephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002514<a name=\"hpo-HP.580002514\"> </a></td><td>Cerebral calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0010576<a name=\"hpo-HP.580010576\"> </a></td><td>Intracranial cystic lesion</td></tr><tr><td style=\"white-space:nowrap\">HP:0001622<a name=\"hpo-HP.580001622\"> </a></td><td>Premature birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002415<a name=\"hpo-HP.580002415\"> </a></td><td>Leukodystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001320<a name=\"hpo-HP.580001320\"> </a></td><td>Cerebellar vermis hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001773<a name=\"hpo-HP.580001773\"> </a></td><td>Short foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0002750<a name=\"hpo-HP.580002750\"> </a></td><td>Delayed skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004415<a name=\"hpo-HP.580004415\"> </a></td><td>Pulmonary artery stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012741<a name=\"hpo-HP.580012741\"> </a></td><td>Unilateral cryptorchidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000036<a name=\"hpo-HP.580000036\"> </a></td><td>Abnormality of the penis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002408<a name=\"hpo-HP.580002408\"> </a></td><td>Cerebral arteriovenous malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0007457<a name=\"hpo-HP.580007457\"> </a></td><td>Prominent veins on trunk</td></tr><tr><td style=\"white-space:nowrap\">HP:0000378<a name=\"hpo-HP.580000378\"> </a></td><td>Cupped ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0000396<a name=\"hpo-HP.580000396\"> </a></td><td>Overfolded helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000035<a name=\"hpo-HP.580000035\"> </a></td><td>Abnormal testis morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009895<a name=\"hpo-HP.580009895\"> </a></td><td>Abnormality of the crus of the helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000034<a name=\"hpo-HP.580000034\"> </a></td><td>Hydrocele testis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000722<a name=\"hpo-HP.580000722\"> </a></td><td>Obsessive-compulsive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0000845<a name=\"hpo-HP.580000845\"> </a></td><td>Growth hormone excess</td></tr><tr><td style=\"white-space:nowrap\">HP:0100829<a name=\"hpo-HP.580100829\"> </a></td><td>Galactorrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001578<a name=\"hpo-HP.580001578\"> </a></td><td>Increased circulating cortisol level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000786<a name=\"hpo-HP.580000786\"> </a></td><td>Primary amenorrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0001701<a name=\"hpo-HP.580001701\"> </a></td><td>Pericarditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002076<a name=\"hpo-HP.580002076\"> </a></td><td>Migraine</td></tr><tr><td style=\"white-space:nowrap\">HP:0004755<a name=\"hpo-HP.580004755\"> </a></td><td>Supraventricular tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010522<a name=\"hpo-HP.580010522\"> </a></td><td>Dyslexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004313<a name=\"hpo-HP.580004313\"> </a></td><td>Decreased circulating antibody level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000011<a name=\"hpo-HP.580000011\"> </a></td><td>Neurogenic bladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000641<a name=\"hpo-HP.580000641\"> </a></td><td>Dysmetric saccades</td></tr><tr><td style=\"white-space:nowrap\">HP:0007772<a name=\"hpo-HP.580007772\"> </a></td><td>Impaired smooth pursuit</td></tr><tr><td style=\"white-space:nowrap\">HP:0001583<a name=\"hpo-HP.580001583\"> </a></td><td>Rotary nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010544<a name=\"hpo-HP.580010544\"> </a></td><td>Vertical nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012735<a name=\"hpo-HP.580012735\"> </a></td><td>Cough</td></tr><tr><td style=\"white-space:nowrap\">HP:0002075<a name=\"hpo-HP.580002075\"> </a></td><td>Dysdiadochokinesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0007256<a name=\"hpo-HP.580007256\"> </a></td><td>Abnormal pyramidal sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0001257<a name=\"hpo-HP.580001257\"> </a></td><td>Spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002321<a name=\"hpo-HP.580002321\"> </a></td><td>Vertigo</td></tr><tr><td style=\"white-space:nowrap\">HP:0002384<a name=\"hpo-HP.580002384\"> </a></td><td>Focal impaired awareness seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011376<a name=\"hpo-HP.580011376\"> </a></td><td>Morphological abnormality of the vestibule of the inner ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0002326<a name=\"hpo-HP.580002326\"> </a></td><td>Transient ischemic attack</td></tr><tr><td style=\"white-space:nowrap\">HP:0005584<a name=\"hpo-HP.580005584\"> </a></td><td>Renal cell carcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0003124<a name=\"hpo-HP.580003124\"> </a></td><td>Hypercholesterolemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003002<a name=\"hpo-HP.580003002\"> </a></td><td>Breast carcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0004953<a name=\"hpo-HP.580004953\"> </a></td><td>obsolete Dilatation of abdominal aorta</td></tr><tr><td style=\"white-space:nowrap\">HP:0004944<a name=\"hpo-HP.580004944\"> </a></td><td>Dilatation of the cerebral artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0000100<a name=\"hpo-HP.580000100\"> </a></td><td>Nephrotic syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002783<a name=\"hpo-HP.580002783\"> </a></td><td>Recurrent lower respiratory tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0003470<a name=\"hpo-HP.580003470\"> </a></td><td>Paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006597<a name=\"hpo-HP.580006597\"> </a></td><td>Diaphragmatic paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008151<a name=\"hpo-HP.580008151\"> </a></td><td>Prolonged prothrombin time</td></tr><tr><td style=\"white-space:nowrap\">HP:0010628<a name=\"hpo-HP.580010628\"> </a></td><td>Facial palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011892<a name=\"hpo-HP.580011892\"> </a></td><td>Low levels of vitamin K</td></tr><tr><td style=\"white-space:nowrap\">HP:0001075<a name=\"hpo-HP.580001075\"> </a></td><td>Atrophic scars</td></tr><tr><td style=\"white-space:nowrap\">HP:0001816<a name=\"hpo-HP.580001816\"> </a></td><td>Thin nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002216<a name=\"hpo-HP.580002216\"> </a></td><td>Premature graying of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0003401<a name=\"hpo-HP.580003401\"> </a></td><td>Paresthesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100134<a name=\"hpo-HP.580100134\"> </a></td><td>Abnormality of the axillary hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0100797<a name=\"hpo-HP.580100797\"> </a></td><td>Toenail dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010461<a name=\"hpo-HP.580010461\"> </a></td><td>Abnormality of the male genitalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000044<a name=\"hpo-HP.580000044\"> </a></td><td>Hypogonadotropic hypogonadism</td></tr><tr><td style=\"white-space:nowrap\">HP:0100568<a name=\"hpo-HP.580100568\"> </a></td><td>Neoplasm of the endocrine system</td></tr><tr><td style=\"white-space:nowrap\">HP:0001646<a name=\"hpo-HP.580001646\"> </a></td><td>Abnormal aortic valve morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000813<a name=\"hpo-HP.580000813\"> </a></td><td>Bicornuate uterus</td></tr><tr><td style=\"white-space:nowrap\">HP:0004380<a name=\"hpo-HP.580004380\"> </a></td><td>Aortic valve calcification</td></tr><tr><td style=\"white-space:nowrap\">HP:0001650<a name=\"hpo-HP.580001650\"> </a></td><td>Aortic valve stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000073<a name=\"hpo-HP.580000073\"> </a></td><td>Ureteral duplication</td></tr><tr><td style=\"white-space:nowrap\">HP:0100651<a name=\"hpo-HP.580100651\"> </a></td><td>Type I diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000819<a name=\"hpo-HP.580000819\"> </a></td><td>Diabetes mellitus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000573<a name=\"hpo-HP.580000573\"> </a></td><td>Retinal hemorrhage</td></tr><tr><td style=\"white-space:nowrap\">HP:0005264<a name=\"hpo-HP.580005264\"> </a></td><td>Abnormality of the gallbladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0000475<a name=\"hpo-HP.580000475\"> </a></td><td>Broad neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000089<a name=\"hpo-HP.580000089\"> </a></td><td>Renal hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000921<a name=\"hpo-HP.580000921\"> </a></td><td>Missing ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0001789<a name=\"hpo-HP.580001789\"> </a></td><td>Hydrops fetalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002089<a name=\"hpo-HP.580002089\"> </a></td><td>Pulmonary hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003422<a name=\"hpo-HP.580003422\"> </a></td><td>Vertebral segmentation defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002323<a name=\"hpo-HP.580002323\"> </a></td><td>Anencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000341<a name=\"hpo-HP.580000341\"> </a></td><td>Narrow forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0002869<a name=\"hpo-HP.580002869\"> </a></td><td>Flared iliac wings</td></tr><tr><td style=\"white-space:nowrap\">HP:0003100<a name=\"hpo-HP.580003100\"> </a></td><td>Slender long bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0003275<a name=\"hpo-HP.580003275\"> </a></td><td>Narrow pelvis bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0009891<a name=\"hpo-HP.580009891\"> </a></td><td>Underdeveloped supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0011039<a name=\"hpo-HP.580011039\"> </a></td><td>Abnormality of the helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0008572<a name=\"hpo-HP.580008572\"> </a></td><td>External ear malformation</td></tr><tr><td style=\"white-space:nowrap\">HP:0009738<a name=\"hpo-HP.580009738\"> </a></td><td>Abnormality of the antihelix</td></tr><tr><td style=\"white-space:nowrap\">HP:0011328<a name=\"hpo-HP.580011328\"> </a></td><td>Abnormality of fontanelles</td></tr><tr><td style=\"white-space:nowrap\">HP:0012155<a name=\"hpo-HP.580012155\"> </a></td><td>Decreased corneal sensation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004602<a name=\"hpo-HP.580004602\"> </a></td><td>Cervical C2/C3 vertebral fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002997<a name=\"hpo-HP.580002997\"> </a></td><td>Abnormality of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0009777<a name=\"hpo-HP.580009777\"> </a></td><td>Absent thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002893<a name=\"hpo-HP.580002893\"> </a></td><td>Pituitary adenoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0040278<a name=\"hpo-HP.580040278\"> </a></td><td>Prolactinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001555<a name=\"hpo-HP.580001555\"> </a></td><td>Asymmetry of the thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0000902<a name=\"hpo-HP.580000902\"> </a></td><td>Rib fusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002164<a name=\"hpo-HP.580002164\"> </a></td><td>Nail dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011314<a name=\"hpo-HP.580011314\"> </a></td><td>Abnormality of long bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002867<a name=\"hpo-HP.580002867\"> </a></td><td>Abnormality of the ilium</td></tr><tr><td style=\"white-space:nowrap\">HP:0000774<a name=\"hpo-HP.580000774\"> </a></td><td>Narrow chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0006482<a name=\"hpo-HP.580006482\"> </a></td><td>Abnormality of dental morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0004383<a name=\"hpo-HP.580004383\"> </a></td><td>Hypoplastic left heart</td></tr><tr><td style=\"white-space:nowrap\">HP:0002015<a name=\"hpo-HP.580002015\"> </a></td><td>Dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0500093<a name=\"hpo-HP.580500093\"> </a></td><td>Food allergy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001519<a name=\"hpo-HP.580001519\"> </a></td><td>Disproportionate tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0003179<a name=\"hpo-HP.580003179\"> </a></td><td>Protrusio acetabuli</td></tr><tr><td style=\"white-space:nowrap\">HP:0007385<a name=\"hpo-HP.580007385\"> </a></td><td>Aplasia cutis congenita of scalp</td></tr><tr><td style=\"white-space:nowrap\">HP:0000716<a name=\"hpo-HP.580000716\"> </a></td><td>Depressivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0012583<a name=\"hpo-HP.580012583\"> </a></td><td>Unilateral renal hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000618<a name=\"hpo-HP.580000618\"> </a></td><td>Blindness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001004<a name=\"hpo-HP.580001004\"> </a></td><td>Lymphedema</td></tr><tr><td style=\"white-space:nowrap\">HP:0002652<a name=\"hpo-HP.580002652\"> </a></td><td>Skeletal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012520<a name=\"hpo-HP.580012520\"> </a></td><td>Perivascular spaces</td></tr><tr><td style=\"white-space:nowrap\">HP:0005293<a name=\"hpo-HP.580005293\"> </a></td><td>Venous insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0012432<a name=\"hpo-HP.580012432\"> </a></td><td>Chronic fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002578<a name=\"hpo-HP.580002578\"> </a></td><td>Gastroparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001658<a name=\"hpo-HP.580001658\"> </a></td><td>Myocardial infarction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001802<a name=\"hpo-HP.580001802\"> </a></td><td>Absent toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0001821<a name=\"hpo-HP.580001821\"> </a></td><td>Broad nail</td></tr><tr><td style=\"white-space:nowrap\">HP:0000807<a name=\"hpo-HP.580000807\"> </a></td><td>Glandular hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0100582<a name=\"hpo-HP.580100582\"> </a></td><td>Nasal polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002653<a name=\"hpo-HP.580002653\"> </a></td><td>Bone pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0001073<a name=\"hpo-HP.580001073\"> </a></td><td>Cigarette-paper scars</td></tr><tr><td style=\"white-space:nowrap\">HP:0031913<a name=\"hpo-HP.580031913\"> </a></td><td>Rhombencephalosynapsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002617<a name=\"hpo-HP.580002617\"> </a></td><td>Dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005107<a name=\"hpo-HP.580005107\"> </a></td><td>Abnormal sacrum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002025<a name=\"hpo-HP.580002025\"> </a></td><td>Anal stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0009099<a name=\"hpo-HP.580009099\"> </a></td><td>Median cleft palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0003212<a name=\"hpo-HP.580003212\"> </a></td><td>Increased circulating IgE level</td></tr><tr><td style=\"white-space:nowrap\">HP:0001319<a name=\"hpo-HP.580001319\"> </a></td><td>Neonatal hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002659<a name=\"hpo-HP.580002659\"> </a></td><td>Increased susceptibility to fractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0025246<a name=\"hpo-HP.580025246\"> </a></td><td>Trichilemmal cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0002107<a name=\"hpo-HP.580002107\"> </a></td><td>Pneumothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0000107<a name=\"hpo-HP.580000107\"> </a></td><td>Renal cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0001025<a name=\"hpo-HP.580001025\"> </a></td><td>Urticaria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002204<a name=\"hpo-HP.580002204\"> </a></td><td>Pulmonary embolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001058<a name=\"hpo-HP.580001058\"> </a></td><td>Poor wound healing</td></tr><tr><td style=\"white-space:nowrap\">HP:0003010<a name=\"hpo-HP.580003010\"> </a></td><td>Prolonged bleeding time</td></tr><tr><td style=\"white-space:nowrap\">HP:0100502<a name=\"hpo-HP.580100502\"> </a></td><td>Vitamin B12 deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0100510<a name=\"hpo-HP.580100510\"> </a></td><td>Low levels of vitamin C</td></tr><tr><td style=\"white-space:nowrap\">HP:0030976<a name=\"hpo-HP.580030976\"> </a></td><td>Abnormal factor VIII activity</td></tr><tr><td style=\"white-space:nowrap\">HP:0100789<a name=\"hpo-HP.580100789\"> </a></td><td>Torus palatinus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000108<a name=\"hpo-HP.580000108\"> </a></td><td>Renal corticomedullary cysts</td></tr><tr><td style=\"white-space:nowrap\">HP:0000072<a name=\"hpo-HP.580000072\"> </a></td><td>Hydroureter</td></tr><tr><td style=\"white-space:nowrap\">HP:0000019<a name=\"hpo-HP.580000019\"> </a></td><td>Urinary hesitancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100771<a name=\"hpo-HP.580100771\"> </a></td><td>Hypoperistalsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000021<a name=\"hpo-HP.580000021\"> </a></td><td>Megacystis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004388<a name=\"hpo-HP.580004388\"> </a></td><td>Microcolon</td></tr><tr><td style=\"white-space:nowrap\">HP:0005247<a name=\"hpo-HP.580005247\"> </a></td><td>Hypoplasia of the abdominal wall musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0004794<a name=\"hpo-HP.580004794\"> </a></td><td>Malrotation of small bowel</td></tr><tr><td style=\"white-space:nowrap\">HP:0000045<a name=\"hpo-HP.580000045\"> </a></td><td>Abnormality of the scrotum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002236<a name=\"hpo-HP.580002236\"> </a></td><td>Frontal upsweep of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0000212<a name=\"hpo-HP.580000212\"> </a></td><td>Gingival overgrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001808<a name=\"hpo-HP.580001808\"> </a></td><td>Fragile nails</td></tr><tr><td style=\"white-space:nowrap\">HP:0000225<a name=\"hpo-HP.580000225\"> </a></td><td>Gingival bleeding</td></tr><tr><td style=\"white-space:nowrap\">HP:0006009<a name=\"hpo-HP.580006009\"> </a></td><td>Broad phalanx</td></tr><tr><td style=\"white-space:nowrap\">HP:0001837<a name=\"hpo-HP.580001837\"> </a></td><td>Broad toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001946<a name=\"hpo-HP.580001946\"> </a></td><td>Ketosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002490<a name=\"hpo-HP.580002490\"> </a></td><td>Increased CSF lactate</td></tr><tr><td style=\"white-space:nowrap\">HP:0002922<a name=\"hpo-HP.580002922\"> </a></td><td>Increased CSF protein</td></tr><tr><td style=\"white-space:nowrap\">HP:0003128<a name=\"hpo-HP.580003128\"> </a></td><td>Lactic acidosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003111<a name=\"hpo-HP.580003111\"> </a></td><td>Abnormal blood ion concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0032234<a name=\"hpo-HP.580032234\"> </a></td><td>Increased circulating creatine kinase MM isoform</td></tr><tr><td style=\"white-space:nowrap\">HP:0003348<a name=\"hpo-HP.580003348\"> </a></td><td>Hyperalaninemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008347<a name=\"hpo-HP.580008347\"> </a></td><td>Decreased activity of mitochondrial complex IV</td></tr><tr><td style=\"white-space:nowrap\">HP:0000326<a name=\"hpo-HP.580000326\"> </a></td><td>Abnormality of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0010758<a name=\"hpo-HP.580010758\"> </a></td><td>Abnormality of the premaxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0005681<a name=\"hpo-HP.580005681\"> </a></td><td>Juvenile rheumatoid arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000514<a name=\"hpo-HP.580000514\"> </a></td><td>Slow saccadic eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0002788<a name=\"hpo-HP.580002788\"> </a></td><td>Recurrent upper respiratory tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0003396<a name=\"hpo-HP.580003396\"> </a></td><td>Syringomyelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003011<a name=\"hpo-HP.580003011\"> </a></td><td>Abnormality of the musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0002098<a name=\"hpo-HP.580002098\"> </a></td><td>Respiratory distress</td></tr><tr><td style=\"white-space:nowrap\">HP:0002018<a name=\"hpo-HP.580002018\"> </a></td><td>Nausea</td></tr><tr><td style=\"white-space:nowrap\">HP:0002014<a name=\"hpo-HP.580002014\"> </a></td><td>Diarrhea</td></tr><tr><td style=\"white-space:nowrap\">HP:0025168<a name=\"hpo-HP.580025168\"> </a></td><td>Left ventricular diastolic dysfunction</td></tr><tr><td style=\"white-space:nowrap\">HP:0001679<a name=\"hpo-HP.580001679\"> </a></td><td>Abnormal aortic morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000159<a name=\"hpo-HP.580000159\"> </a></td><td>Abnormal lip morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011338<a name=\"hpo-HP.580011338\"> </a></td><td>Abnormality of mouth shape</td></tr><tr><td style=\"white-space:nowrap\">HP:0000478<a name=\"hpo-HP.580000478\"> </a></td><td>Abnormality of the eye</td></tr><tr><td style=\"white-space:nowrap\">HP:0000154<a name=\"hpo-HP.580000154\"> </a></td><td>Wide mouth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001513<a name=\"hpo-HP.580001513\"> </a></td><td>Obesity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002475<a name=\"hpo-HP.580002475\"> </a></td><td>Myelomeningocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0003765<a name=\"hpo-HP.580003765\"> </a></td><td>Psoriasiform dermatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010289<a name=\"hpo-HP.580010289\"> </a></td><td>Cleft of alveolar ridge of maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0003908<a name=\"hpo-HP.580003908\"> </a></td><td>Corner fracture of metaphysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002190<a name=\"hpo-HP.580002190\"> </a></td><td>Choroid plexus cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0004370<a name=\"hpo-HP.580004370\"> </a></td><td>Abnormality of temperature regulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011611<a name=\"hpo-HP.580011611\"> </a></td><td>Interrupted aortic arch</td></tr><tr><td style=\"white-space:nowrap\">HP:0000737<a name=\"hpo-HP.580000737\"> </a></td><td>Irritability</td></tr><tr><td style=\"white-space:nowrap\">HP:0001344<a name=\"hpo-HP.580001344\"> </a></td><td>Absent speech</td></tr><tr><td style=\"white-space:nowrap\">HP:0002376<a name=\"hpo-HP.580002376\"> </a></td><td>Developmental regression</td></tr><tr><td style=\"white-space:nowrap\">HP:0002140<a name=\"hpo-HP.580002140\"> </a></td><td>Ischemic stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0001287<a name=\"hpo-HP.580001287\"> </a></td><td>Meningitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002721<a name=\"hpo-HP.580002721\"> </a></td><td>Immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000041<a name=\"hpo-HP.580000041\"> </a></td><td>Chordee</td></tr><tr><td style=\"white-space:nowrap\">HP:0012854<a name=\"hpo-HP.580012854\"> </a></td><td>Midshaft hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0000808<a name=\"hpo-HP.580000808\"> </a></td><td>Penoscrotal hypospadias</td></tr><tr><td style=\"white-space:nowrap\">HP:0000048<a name=\"hpo-HP.580000048\"> </a></td><td>Bifid scrotum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001047<a name=\"hpo-HP.580001047\"> </a></td><td>Atopic dermatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001621<a name=\"hpo-HP.580001621\"> </a></td><td>Weak voice</td></tr><tr><td style=\"white-space:nowrap\">HP:0002372<a name=\"hpo-HP.580002372\"> </a></td><td>Normal interictal EEG</td></tr><tr><td style=\"white-space:nowrap\">HP:0012803<a name=\"hpo-HP.580012803\"> </a></td><td>Anisometropia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011386<a name=\"hpo-HP.580011386\"> </a></td><td>Narrow internal auditory canal</td></tr><tr><td style=\"white-space:nowrap\">HP:0012714<a name=\"hpo-HP.580012714\"> </a></td><td>Severe hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0006485<a name=\"hpo-HP.580006485\"> </a></td><td>Agenesis of incisor</td></tr><tr><td style=\"white-space:nowrap\">HP:0000787<a name=\"hpo-HP.580000787\"> </a></td><td>Nephrolithiasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011332<a name=\"hpo-HP.580011332\"> </a></td><td>Hemifacial hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001909<a name=\"hpo-HP.580001909\"> </a></td><td>Leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004808<a name=\"hpo-HP.580004808\"> </a></td><td>Acute myeloid leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006495<a name=\"hpo-HP.580006495\"> </a></td><td>Aplasia/Hypoplasia of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0001180<a name=\"hpo-HP.580001180\"> </a></td><td>Hand oligodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002991<a name=\"hpo-HP.580002991\"> </a></td><td>Abnormality of fibula morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001849<a name=\"hpo-HP.580001849\"> </a></td><td>Foot oligodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0006507<a name=\"hpo-HP.580006507\"> </a></td><td>Aplasia/hypoplasia of the humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0005613<a name=\"hpo-HP.580005613\"> </a></td><td>Aplasia/hypoplasia of the femur</td></tr><tr><td style=\"white-space:nowrap\">HP:0006492<a name=\"hpo-HP.580006492\"> </a></td><td>Aplasia/Hypoplasia of the fibula</td></tr><tr><td style=\"white-space:nowrap\">HP:0000098<a name=\"hpo-HP.580000098\"> </a></td><td>Tall stature</td></tr><tr><td style=\"white-space:nowrap\">HP:0003311<a name=\"hpo-HP.580003311\"> </a></td><td>Hypoplasia of the odontoid process</td></tr><tr><td style=\"white-space:nowrap\">HP:0005752<a name=\"hpo-HP.580005752\"> </a></td><td>Flattened moderately deformed vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0030039<a name=\"hpo-HP.580030039\"> </a></td><td>Fused thoracic vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0003304<a name=\"hpo-HP.580003304\"> </a></td><td>Spondylolysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001659<a name=\"hpo-HP.580001659\"> </a></td><td>Aortic regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002984<a name=\"hpo-HP.580002984\"> </a></td><td>Hypoplasia of the radius</td></tr><tr><td style=\"white-space:nowrap\">HP:0009944<a name=\"hpo-HP.580009944\"> </a></td><td>Partial duplication of thumb phalanx</td></tr><tr><td style=\"white-space:nowrap\">HP:0005819<a name=\"hpo-HP.580005819\"> </a></td><td>Short middle phalanx of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0002110<a name=\"hpo-HP.580002110\"> </a></td><td>Bronchiectasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001677<a name=\"hpo-HP.580001677\"> </a></td><td>Coronary artery atherosclerosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001737<a name=\"hpo-HP.580001737\"> </a></td><td>Pancreatic cysts</td></tr><tr><td style=\"white-space:nowrap\">HP:0005113<a name=\"hpo-HP.580005113\"> </a></td><td>Aortic arch aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003022<a name=\"hpo-HP.580003022\"> </a></td><td>Hypoplasia of the ulna</td></tr><tr><td style=\"white-space:nowrap\">HP:0002205<a name=\"hpo-HP.580002205\"> </a></td><td>Recurrent respiratory infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0001669<a name=\"hpo-HP.580001669\"> </a></td><td>Transposition of the great arteries</td></tr><tr><td style=\"white-space:nowrap\">HP:0001716<a name=\"hpo-HP.580001716\"> </a></td><td>Wolff-Parkinson-White syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0002758<a name=\"hpo-HP.580002758\"> </a></td><td>Osteoarthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002037<a name=\"hpo-HP.580002037\"> </a></td><td>Inflammation of the large intestine</td></tr><tr><td style=\"white-space:nowrap\">HP:0009892<a name=\"hpo-HP.580009892\"> </a></td><td>Anotia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011331<a name=\"hpo-HP.580011331\"> </a></td><td>Hemifacial atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0009118<a name=\"hpo-HP.580009118\"> </a></td><td>Aplasia/Hypoplasia of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0009940<a name=\"hpo-HP.580009940\"> </a></td><td>Asymmetry of the mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000682<a name=\"hpo-HP.580000682\"> </a></td><td>Abnormality of dental enamel</td></tr><tr><td style=\"white-space:nowrap\">HP:0009908<a name=\"hpo-HP.580009908\"> </a></td><td>Anterior creases of earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001541<a name=\"hpo-HP.580001541\"> </a></td><td>Ascites</td></tr><tr><td style=\"white-space:nowrap\">HP:0006687<a name=\"hpo-HP.580006687\"> </a></td><td>Aortic tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0010535<a name=\"hpo-HP.580010535\"> </a></td><td>Sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0100633<a name=\"hpo-HP.580100633\"> </a></td><td>Esophagitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002105<a name=\"hpo-HP.580002105\"> </a></td><td>Hemoptysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002613<a name=\"hpo-HP.580002613\"> </a></td><td>Biliary cirrhosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004469<a name=\"hpo-HP.580004469\"> </a></td><td>Chronic bronchitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002720<a name=\"hpo-HP.580002720\"> </a></td><td>Decreased circulating IgA level</td></tr><tr><td style=\"white-space:nowrap\">HP:0002904<a name=\"hpo-HP.580002904\"> </a></td><td>Hyperbilirubinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003237<a name=\"hpo-HP.580003237\"> </a></td><td>Increased circulating IgG level</td></tr><tr><td style=\"white-space:nowrap\">HP:0003262<a name=\"hpo-HP.580003262\"> </a></td><td>Smooth muscle antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0011227<a name=\"hpo-HP.580011227\"> </a></td><td>Elevated C-reactive protein level</td></tr><tr><td style=\"white-space:nowrap\">HP:0001852<a name=\"hpo-HP.580001852\"> </a></td><td>Sandal gap</td></tr><tr><td style=\"white-space:nowrap\">HP:0004381<a name=\"hpo-HP.580004381\"> </a></td><td>Supravalvular aortic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100700<a name=\"hpo-HP.580100700\"> </a></td><td>Abnormal arachnoid mater morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002624<a name=\"hpo-HP.580002624\"> </a></td><td>Abnormal venous morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002289<a name=\"hpo-HP.580002289\"> </a></td><td>Alopecia universalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0009588<a name=\"hpo-HP.580009588\"> </a></td><td>Vestibular Schwannoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001648<a name=\"hpo-HP.580001648\"> </a></td><td>Cor pulmonale</td></tr><tr><td style=\"white-space:nowrap\">HP:0002091<a name=\"hpo-HP.580002091\"> </a></td><td>Restrictive ventilatory defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002092<a name=\"hpo-HP.580002092\"> </a></td><td>Pulmonary arterial hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0002113<a name=\"hpo-HP.580002113\"> </a></td><td>Pulmonary infiltrates</td></tr><tr><td style=\"white-space:nowrap\">HP:0003138<a name=\"hpo-HP.580003138\"> </a></td><td>Increased blood urea nitrogen</td></tr><tr><td style=\"white-space:nowrap\">HP:0003259<a name=\"hpo-HP.580003259\"> </a></td><td>Elevated serum creatinine</td></tr><tr><td style=\"white-space:nowrap\">HP:0005180<a name=\"hpo-HP.580005180\"> </a></td><td>Tricuspid regurgitation</td></tr><tr><td style=\"white-space:nowrap\">HP:0012585<a name=\"hpo-HP.580012585\"> </a></td><td>Renal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005133<a name=\"hpo-HP.580005133\"> </a></td><td>Right ventricular dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005575<a name=\"hpo-HP.580005575\"> </a></td><td>Hemolytic-uremic syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0001697<a name=\"hpo-HP.580001697\"> </a></td><td>Abnormal pericardium morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012486<a name=\"hpo-HP.580012486\"> </a></td><td>Myelitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002385<a name=\"hpo-HP.580002385\"> </a></td><td>Paraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006706<a name=\"hpo-HP.580006706\"> </a></td><td>Cystic liver disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0010880<a name=\"hpo-HP.580010880\"> </a></td><td>Increased nuchal translucency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000457<a name=\"hpo-HP.580000457\"> </a></td><td>Depressed nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0002263<a name=\"hpo-HP.580002263\"> </a></td><td>Exaggerated cupid's bow</td></tr><tr><td style=\"white-space:nowrap\">HP:0002500<a name=\"hpo-HP.580002500\"> </a></td><td>Abnormality of the cerebral white matter</td></tr><tr><td style=\"white-space:nowrap\">HP:0002835<a name=\"hpo-HP.580002835\"> </a></td><td>Aspiration</td></tr><tr><td style=\"white-space:nowrap\">HP:0000600<a name=\"hpo-HP.580000600\"> </a></td><td>Abnormality of the pharynx</td></tr><tr><td style=\"white-space:nowrap\">HP:0004327<a name=\"hpo-HP.580004327\"> </a></td><td>Abnormal vitreous humor morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0004378<a name=\"hpo-HP.580004378\"> </a></td><td>Abnormality of the anus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012374<a name=\"hpo-HP.580012374\"> </a></td><td>obsolete Abnormal globe morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0100768<a name=\"hpo-HP.580100768\"> </a></td><td>Choriocarcinoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0030991<a name=\"hpo-HP.580030991\"> </a></td><td>Sclerosing cholangitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006510<a name=\"hpo-HP.580006510\"> </a></td><td>Chronic pulmonary obstruction</td></tr><tr><td style=\"white-space:nowrap\">HP:0000710<a name=\"hpo-HP.580000710\"> </a></td><td>Hyperorality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001270<a name=\"hpo-HP.580001270\"> </a></td><td>Motor delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0001548<a name=\"hpo-HP.580001548\"> </a></td><td>Overgrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002311<a name=\"hpo-HP.580002311\"> </a></td><td>Incoordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0006288<a name=\"hpo-HP.580006288\"> </a></td><td>Advanced eruption of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0006323<a name=\"hpo-HP.580006323\"> </a></td><td>Premature loss of primary teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009890<a name=\"hpo-HP.580009890\"> </a></td><td>High anterior hairline</td></tr><tr><td style=\"white-space:nowrap\">HP:0100034<a name=\"hpo-HP.580100034\"> </a></td><td>Motor tics</td></tr><tr><td style=\"white-space:nowrap\">HP:0100035<a name=\"hpo-HP.580100035\"> </a></td><td>Phonic tics</td></tr><tr><td style=\"white-space:nowrap\">HP:0000348<a name=\"hpo-HP.580000348\"> </a></td><td>High forehead</td></tr><tr><td style=\"white-space:nowrap\">HP:0001520<a name=\"hpo-HP.580001520\"> </a></td><td>Large for gestational age</td></tr><tr><td style=\"white-space:nowrap\">HP:0001239<a name=\"hpo-HP.580001239\"> </a></td><td>Wrist flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0007359<a name=\"hpo-HP.580007359\"> </a></td><td>Focal-onset seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0000430<a name=\"hpo-HP.580000430\"> </a></td><td>Underdeveloped nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0007400<a name=\"hpo-HP.580007400\"> </a></td><td>Irregular hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0100495<a name=\"hpo-HP.580100495\"> </a></td><td>Mastocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012378<a name=\"hpo-HP.580012378\"> </a></td><td>Fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002046<a name=\"hpo-HP.580002046\"> </a></td><td>Heat intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0003270<a name=\"hpo-HP.580003270\"> </a></td><td>Abdominal distention</td></tr><tr><td style=\"white-space:nowrap\">HP:0002180<a name=\"hpo-HP.580002180\"> </a></td><td>Neurodegeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0003493<a name=\"hpo-HP.580003493\"> </a></td><td>Antinuclear antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0030057<a name=\"hpo-HP.580030057\"> </a></td><td>Autoimmune antibody positivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0006802<a name=\"hpo-HP.580006802\"> </a></td><td>Abnormal anterior horn cell morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000064<a name=\"hpo-HP.580000064\"> </a></td><td>Hypoplastic labia minora</td></tr><tr><td style=\"white-space:nowrap\">HP:0000338<a name=\"hpo-HP.580000338\"> </a></td><td>Hypomimic face</td></tr><tr><td style=\"white-space:nowrap\">HP:0001642<a name=\"hpo-HP.580001642\"> </a></td><td>Pulmonic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011344<a name=\"hpo-HP.580011344\"> </a></td><td>Severe global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0200007<a name=\"hpo-HP.580200007\"> </a></td><td>Abnormal size of the palpebral fissures</td></tr><tr><td style=\"white-space:nowrap\">HP:0004464<a name=\"hpo-HP.580004464\"> </a></td><td>Postauricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0000130<a name=\"hpo-HP.580000130\"> </a></td><td>Abnormality of the uterus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000137<a name=\"hpo-HP.580000137\"> </a></td><td>Abnormality of the ovary</td></tr><tr><td style=\"white-space:nowrap\">HP:0000142<a name=\"hpo-HP.580000142\"> </a></td><td>Abnormal vagina morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000370<a name=\"hpo-HP.580000370\"> </a></td><td>Abnormality of the middle ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0011787<a name=\"hpo-HP.580011787\"> </a></td><td>Central hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000274<a name=\"hpo-HP.580000274\"> </a></td><td>Small face</td></tr><tr><td style=\"white-space:nowrap\">HP:0000446<a name=\"hpo-HP.580000446\"> </a></td><td>Narrow nasal bridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0000622<a name=\"hpo-HP.580000622\"> </a></td><td>Blurred vision</td></tr><tr><td style=\"white-space:nowrap\">HP:0001245<a name=\"hpo-HP.580001245\"> </a></td><td>Small thenar eminence</td></tr><tr><td style=\"white-space:nowrap\">HP:0009601<a name=\"hpo-HP.580009601\"> </a></td><td>Aplasia/Hypoplasia of the thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0011343<a name=\"hpo-HP.580011343\"> </a></td><td>Moderate global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0000419<a name=\"hpo-HP.580000419\"> </a></td><td>Abnormality of the nasal septum</td></tr><tr><td style=\"white-space:nowrap\">HP:0000502<a name=\"hpo-HP.580000502\"> </a></td><td>Abnormal conjunctiva morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000591<a name=\"hpo-HP.580000591\"> </a></td><td>Abnormal sclera morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000615<a name=\"hpo-HP.580000615\"> </a></td><td>Abnormal pupil morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001163<a name=\"hpo-HP.580001163\"> </a></td><td>Abnormality of the metacarpal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0001832<a name=\"hpo-HP.580001832\"> </a></td><td>Abnormal metatarsal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001850<a name=\"hpo-HP.580001850\"> </a></td><td>Abnormality of the tarsal bones</td></tr><tr><td style=\"white-space:nowrap\">HP:0010490<a name=\"hpo-HP.580010490\"> </a></td><td>Abnormality of the palmar creases</td></tr><tr><td style=\"white-space:nowrap\">HP:0010881<a name=\"hpo-HP.580010881\"> </a></td><td>Abnormality of the umbilical cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0009113<a name=\"hpo-HP.580009113\"> </a></td><td>Diaphragmatic weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0011664<a name=\"hpo-HP.580011664\"> </a></td><td>Left ventricular noncompaction cardiomyopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100240<a name=\"hpo-HP.580100240\"> </a></td><td>Synostosis of joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0001838<a name=\"hpo-HP.580001838\"> </a></td><td>Rocker bottom foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0003717<a name=\"hpo-HP.580003717\"> </a></td><td>Minimal subcutaneous fat</td></tr><tr><td style=\"white-space:nowrap\">HP:0001339<a name=\"hpo-HP.580001339\"> </a></td><td>Lissencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001591<a name=\"hpo-HP.580001591\"> </a></td><td>Bell-shaped thorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0002655<a name=\"hpo-HP.580002655\"> </a></td><td>Spondyloepiphyseal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002983<a name=\"hpo-HP.580002983\"> </a></td><td>Micromelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003016<a name=\"hpo-HP.580003016\"> </a></td><td>Metaphyseal widening</td></tr><tr><td style=\"white-space:nowrap\">HP:0009826<a name=\"hpo-HP.580009826\"> </a></td><td>Limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0004488<a name=\"hpo-HP.580004488\"> </a></td><td>Macrocephaly at birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0001695<a name=\"hpo-HP.580001695\"> </a></td><td>Cardiac arrest</td></tr><tr><td style=\"white-space:nowrap\">HP:0001712<a name=\"hpo-HP.580001712\"> </a></td><td>Left ventricular hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100775<a name=\"hpo-HP.580100775\"> </a></td><td>Dural ectasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000846<a name=\"hpo-HP.580000846\"> </a></td><td>Adrenal insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002925<a name=\"hpo-HP.580002925\"> </a></td><td>Increased thyroid-stimulating hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0100646<a name=\"hpo-HP.580100646\"> </a></td><td>Thyroiditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000836<a name=\"hpo-HP.580000836\"> </a></td><td>Hyperthyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0004414<a name=\"hpo-HP.580004414\"> </a></td><td>Abnormality of the pulmonary artery</td></tr><tr><td style=\"white-space:nowrap\">HP:0000465<a name=\"hpo-HP.580000465\"> </a></td><td>Webbed neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0000723<a name=\"hpo-HP.580000723\"> </a></td><td>Restrictive behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0002253<a name=\"hpo-HP.580002253\"> </a></td><td>Colonic diverticula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001310<a name=\"hpo-HP.580001310\"> </a></td><td>Dysmetria</td></tr><tr><td style=\"white-space:nowrap\">HP:0000093<a name=\"hpo-HP.580000093\"> </a></td><td>Proteinuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002907<a name=\"hpo-HP.580002907\"> </a></td><td>Microscopic hematuria</td></tr><tr><td style=\"white-space:nowrap\">HP:0003073<a name=\"hpo-HP.580003073\"> </a></td><td>Hypoalbuminemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004315<a name=\"hpo-HP.580004315\"> </a></td><td>Decreased circulating IgG level</td></tr><tr><td style=\"white-space:nowrap\">HP:0000795<a name=\"hpo-HP.580000795\"> </a></td><td>Abnormality of the urethra</td></tr><tr><td style=\"white-space:nowrap\">HP:0001015<a name=\"hpo-HP.580001015\"> </a></td><td>Prominent superficial veins</td></tr><tr><td style=\"white-space:nowrap\">HP:0004691<a name=\"hpo-HP.580004691\"> </a></td><td>2-3 toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005328<a name=\"hpo-HP.580005328\"> </a></td><td>Progeroid facial appearance</td></tr><tr><td style=\"white-space:nowrap\">HP:0005487<a name=\"hpo-HP.580005487\"> </a></td><td>Prominent metopic ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0007552<a name=\"hpo-HP.580007552\"> </a></td><td>Abnormal subcutaneous fat tissue distribution</td></tr><tr><td style=\"white-space:nowrap\">HP:0100678<a name=\"hpo-HP.580100678\"> </a></td><td>Premature skin wrinkling</td></tr><tr><td style=\"white-space:nowrap\">HP:0031137<a name=\"hpo-HP.580031137\"> </a></td><td>Storage in hepatocytes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002521<a name=\"hpo-HP.580002521\"> </a></td><td>Hypsarrhythmia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005390<a name=\"hpo-HP.580005390\"> </a></td><td>Recurrent opportunistic infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0002716<a name=\"hpo-HP.580002716\"> </a></td><td>Lymphadenopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005379<a name=\"hpo-HP.580005379\"> </a></td><td>obsolete Severe T lymphocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004432<a name=\"hpo-HP.580004432\"> </a></td><td>Agammaglobulinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006695<a name=\"hpo-HP.580006695\"> </a></td><td>Atrioventricular canal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0001733<a name=\"hpo-HP.580001733\"> </a></td><td>Pancreatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002350<a name=\"hpo-HP.580002350\"> </a></td><td>Cerebellar cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0012110<a name=\"hpo-HP.580012110\"> </a></td><td>Hypoplasia of the pons</td></tr><tr><td style=\"white-space:nowrap\">HP:0001948<a name=\"hpo-HP.580001948\"> </a></td><td>Alkalosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003113<a name=\"hpo-HP.580003113\"> </a></td><td>Hypochloremia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003155<a name=\"hpo-HP.580003155\"> </a></td><td>Elevated alkaline phosphatase</td></tr><tr><td style=\"white-space:nowrap\">HP:0003542<a name=\"hpo-HP.580003542\"> </a></td><td>Increased serum pyruvate</td></tr><tr><td style=\"white-space:nowrap\">HP:0000421<a name=\"hpo-HP.580000421\"> </a></td><td>Epistaxis</td></tr><tr><td style=\"white-space:nowrap\">HP:0200136<a name=\"hpo-HP.580200136\"> </a></td><td>Oral-pharyngeal dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000805<a name=\"hpo-HP.580000805\"> </a></td><td>Enuresis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005616<a name=\"hpo-HP.580005616\"> </a></td><td>Accelerated skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002459<a name=\"hpo-HP.580002459\"> </a></td><td>obsolete Dysautonomia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007302<a name=\"hpo-HP.580007302\"> </a></td><td>Bipolar affective disorder</td></tr><tr><td style=\"white-space:nowrap\">HP:0100602<a name=\"hpo-HP.580100602\"> </a></td><td>Preeclampsia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100508<a name=\"hpo-HP.580100508\"> </a></td><td>Abnormality of vitamin metabolism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001140<a name=\"hpo-HP.580001140\"> </a></td><td>Limbal dermoid</td></tr><tr><td style=\"white-space:nowrap\">HP:0000143<a name=\"hpo-HP.580000143\"> </a></td><td>Rectovaginal fistula</td></tr><tr><td style=\"white-space:nowrap\">HP:0001746<a name=\"hpo-HP.580001746\"> </a></td><td>Asplenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012715<a name=\"hpo-HP.580012715\"> </a></td><td>Profound hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001748<a name=\"hpo-HP.580001748\"> </a></td><td>Polysplenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003072<a name=\"hpo-HP.580003072\"> </a></td><td>Hypercalcemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002905<a name=\"hpo-HP.580002905\"> </a></td><td>Hyperphosphatemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002901<a name=\"hpo-HP.580002901\"> </a></td><td>Hypocalcemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001367<a name=\"hpo-HP.580001367\"> </a></td><td>Abnormal joint morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0010562<a name=\"hpo-HP.580010562\"> </a></td><td>Keloids</td></tr><tr><td style=\"white-space:nowrap\">HP:0004430<a name=\"hpo-HP.580004430\"> </a></td><td>Severe combined immunodeficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0000003<a name=\"hpo-HP.580000003\"> </a></td><td>Multicystic kidney dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010980<a name=\"hpo-HP.580010980\"> </a></td><td>Hyperlipoproteinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002155<a name=\"hpo-HP.580002155\"> </a></td><td>Hypertriglyceridemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000520<a name=\"hpo-HP.580000520\"> </a></td><td>Proptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000180<a name=\"hpo-HP.580000180\"> </a></td><td>Lobulated tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0005486<a name=\"hpo-HP.580005486\"> </a></td><td>Small fontanelle</td></tr><tr><td style=\"white-space:nowrap\">HP:0000891<a name=\"hpo-HP.580000891\"> </a></td><td>Cervical ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0002557<a name=\"hpo-HP.580002557\"> </a></td><td>Hypoplastic nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0009112<a name=\"hpo-HP.580009112\"> </a></td><td>Aplasia of the left hemidiaphragm</td></tr><tr><td style=\"white-space:nowrap\">HP:0001719<a name=\"hpo-HP.580001719\"> </a></td><td>Double outlet right ventricle</td></tr><tr><td style=\"white-space:nowrap\">HP:0001682<a name=\"hpo-HP.580001682\"> </a></td><td>Subvalvular aortic stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001667<a name=\"hpo-HP.580001667\"> </a></td><td>Right ventricular hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002101<a name=\"hpo-HP.580002101\"> </a></td><td>Abnormal lung lobation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002202<a name=\"hpo-HP.580002202\"> </a></td><td>Pleural effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0002566<a name=\"hpo-HP.580002566\"> </a></td><td>Intestinal malrotation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004510<a name=\"hpo-HP.580004510\"> </a></td><td>Pancreatic islet-cell hyperplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001747<a name=\"hpo-HP.580001747\"> </a></td><td>Accessory spleen</td></tr><tr><td style=\"white-space:nowrap\">HP:0002181<a name=\"hpo-HP.580002181\"> </a></td><td>Cerebral edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0000967<a name=\"hpo-HP.580000967\"> </a></td><td>Petechiae</td></tr><tr><td style=\"white-space:nowrap\">HP:0009702<a name=\"hpo-HP.580009702\"> </a></td><td>Carpal synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000927<a name=\"hpo-HP.580000927\"> </a></td><td>Abnormality of skeletal maturation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004348<a name=\"hpo-HP.580004348\"> </a></td><td>Abnormality of bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0003019<a name=\"hpo-HP.580003019\"> </a></td><td>Abnormality of the wrist</td></tr><tr><td style=\"white-space:nowrap\">HP:0003063<a name=\"hpo-HP.580003063\"> </a></td><td>Abnormality of the humerus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001059<a name=\"hpo-HP.580001059\"> </a></td><td>Pterygium</td></tr><tr><td style=\"white-space:nowrap\">HP:0001528<a name=\"hpo-HP.580001528\"> </a></td><td>Hemihypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011228<a name=\"hpo-HP.580011228\"> </a></td><td>Horizontal eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0000766<a name=\"hpo-HP.580000766\"> </a></td><td>Abnormality of the sternum</td></tr><tr><td style=\"white-space:nowrap\">HP:0001254<a name=\"hpo-HP.580001254\"> </a></td><td>Lethargy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002360<a name=\"hpo-HP.580002360\"> </a></td><td>Sleep disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0001063<a name=\"hpo-HP.580001063\"> </a></td><td>Acrocyanosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001769<a name=\"hpo-HP.580001769\"> </a></td><td>Broad foot</td></tr><tr><td style=\"white-space:nowrap\">HP:0010280<a name=\"hpo-HP.580010280\"> </a></td><td>Stomatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001288<a name=\"hpo-HP.580001288\"> </a></td><td>Gait disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0008330<a name=\"hpo-HP.580008330\"> </a></td><td>Reduced von Willebrand factor activity</td></tr><tr><td style=\"white-space:nowrap\">HP:0001954<a name=\"hpo-HP.580001954\"> </a></td><td>Recurrent fever</td></tr><tr><td style=\"white-space:nowrap\">HP:0004311<a name=\"hpo-HP.580004311\"> </a></td><td>Abnormal macrophage morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0012539<a name=\"hpo-HP.580012539\"> </a></td><td>Non-Hodgkin lymphoma</td></tr><tr><td style=\"white-space:nowrap\">HP:0002074<a name=\"hpo-HP.580002074\"> </a></td><td>Increased neuronal autofluorescent lipopigment</td></tr><tr><td style=\"white-space:nowrap\">HP:0002973<a name=\"hpo-HP.580002973\"> </a></td><td>Abnormality of the forearm</td></tr><tr><td style=\"white-space:nowrap\">HP:0003203<a name=\"hpo-HP.580003203\"> </a></td><td>Impaired oxidative burst</td></tr><tr><td style=\"white-space:nowrap\">HP:0003027<a name=\"hpo-HP.580003027\"> </a></td><td>Mesomelia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002754<a name=\"hpo-HP.580002754\"> </a></td><td>Osteomyelitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004431<a name=\"hpo-HP.580004431\"> </a></td><td>Complement deficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0001258<a name=\"hpo-HP.580001258\"> </a></td><td>Spastic paraplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012811<a name=\"hpo-HP.580012811\"> </a></td><td>Wide nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0011832<a name=\"hpo-HP.580011832\"> </a></td><td>Narrow nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000288<a name=\"hpo-HP.580000288\"> </a></td><td>Abnormality of the philtrum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002357<a name=\"hpo-HP.580002357\"> </a></td><td>Dysphasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000871<a name=\"hpo-HP.580000871\"> </a></td><td>Panhypopituitarism</td></tr><tr><td style=\"white-space:nowrap\">HP:0000233<a name=\"hpo-HP.580000233\"> </a></td><td>Thin vermilion border</td></tr><tr><td style=\"white-space:nowrap\">HP:0003281<a name=\"hpo-HP.580003281\"> </a></td><td>Increased serum ferritin</td></tr><tr><td style=\"white-space:nowrap\">HP:0010752<a name=\"hpo-HP.580010752\"> </a></td><td>Cleft mandible</td></tr><tr><td style=\"white-space:nowrap\">HP:0000437<a name=\"hpo-HP.580000437\"> </a></td><td>Depressed nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0000453<a name=\"hpo-HP.580000453\"> </a></td><td>Choanal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000863<a name=\"hpo-HP.580000863\"> </a></td><td>Central diabetes insipidus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000058<a name=\"hpo-HP.580000058\"> </a></td><td>Abnormality of the labia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007418<a name=\"hpo-HP.580007418\"> </a></td><td>Alopecia totalis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100765<a name=\"hpo-HP.580100765\"> </a></td><td>Abnormality of the tonsils</td></tr><tr><td style=\"white-space:nowrap\">HP:0100747<a name=\"hpo-HP.580100747\"> </a></td><td>Macrodactyly of toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002109<a name=\"hpo-HP.580002109\"> </a></td><td>obsolete Abnormality of the bronchi</td></tr><tr><td style=\"white-space:nowrap\">HP:0011950<a name=\"hpo-HP.580011950\"> </a></td><td>Bronchiolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002850<a name=\"hpo-HP.580002850\"> </a></td><td>Decreased circulating total IgM</td></tr><tr><td style=\"white-space:nowrap\">HP:0001395<a name=\"hpo-HP.580001395\"> </a></td><td>Hepatic fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010701<a name=\"hpo-HP.580010701\"> </a></td><td>Abnormal immunoglobulin level</td></tr><tr><td style=\"white-space:nowrap\">HP:0009928<a name=\"hpo-HP.580009928\"> </a></td><td>Thick nasal alae</td></tr><tr><td style=\"white-space:nowrap\">HP:0010807<a name=\"hpo-HP.580010807\"> </a></td><td>Open bite</td></tr><tr><td style=\"white-space:nowrap\">HP:0002126<a name=\"hpo-HP.580002126\"> </a></td><td>Polymicrogyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0002900<a name=\"hpo-HP.580002900\"> </a></td><td>Hypokalemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000155<a name=\"hpo-HP.580000155\"> </a></td><td>Oral ulcer</td></tr><tr><td style=\"white-space:nowrap\">HP:0000135<a name=\"hpo-HP.580000135\"> </a></td><td>Hypogonadism</td></tr><tr><td style=\"white-space:nowrap\">HP:0100783<a name=\"hpo-HP.580100783\"> </a></td><td>Breast aplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000336<a name=\"hpo-HP.580000336\"> </a></td><td>Prominent supraorbital ridges</td></tr><tr><td style=\"white-space:nowrap\">HP:0010557<a name=\"hpo-HP.580010557\"> </a></td><td>Overlapping fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0005100<a name=\"hpo-HP.580005100\"> </a></td><td>Premature birth following premature rupture of fetal membranes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002594<a name=\"hpo-HP.580002594\"> </a></td><td>Pancreatic hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010109<a name=\"hpo-HP.580010109\"> </a></td><td>Short hallux</td></tr><tr><td style=\"white-space:nowrap\">HP:0002334<a name=\"hpo-HP.580002334\"> </a></td><td>Abnormality of the cerebellar vermis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003326<a name=\"hpo-HP.580003326\"> </a></td><td>Myalgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001645<a name=\"hpo-HP.580001645\"> </a></td><td>Sudden cardiac death</td></tr><tr><td style=\"white-space:nowrap\">HP:0001612<a name=\"hpo-HP.580001612\"> </a></td><td>Weak cry</td></tr><tr><td style=\"white-space:nowrap\">HP:0001618<a name=\"hpo-HP.580001618\"> </a></td><td>Dysphonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001336<a name=\"hpo-HP.580001336\"> </a></td><td>Myoclonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001283<a name=\"hpo-HP.580001283\"> </a></td><td>Bulbar palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002080<a name=\"hpo-HP.580002080\"> </a></td><td>Intention tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002174<a name=\"hpo-HP.580002174\"> </a></td><td>Postural tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002064<a name=\"hpo-HP.580002064\"> </a></td><td>Spastic gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0009800<a name=\"hpo-HP.580009800\"> </a></td><td>Maternal diabetes</td></tr><tr><td style=\"white-space:nowrap\">HP:0001662<a name=\"hpo-HP.580001662\"> </a></td><td>Bradycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006595<a name=\"hpo-HP.580006595\"> </a></td><td>Scapulohumeral synostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005815<a name=\"hpo-HP.580005815\"> </a></td><td>Supernumerary ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000307<a name=\"hpo-HP.580000307\"> </a></td><td>Pointed chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0012371<a name=\"hpo-HP.580012371\"> </a></td><td>Hyperplasia of midface</td></tr><tr><td style=\"white-space:nowrap\">HP:0002643<a name=\"hpo-HP.580002643\"> </a></td><td>Neonatal respiratory distress</td></tr><tr><td style=\"white-space:nowrap\">HP:0002093<a name=\"hpo-HP.580002093\"> </a></td><td>Respiratory insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0010310<a name=\"hpo-HP.580010310\"> </a></td><td>Chylothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0006376<a name=\"hpo-HP.580006376\"> </a></td><td>Limited elbow flexion</td></tr><tr><td style=\"white-space:nowrap\">HP:0006467<a name=\"hpo-HP.580006467\"> </a></td><td>Limited shoulder movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0010505<a name=\"hpo-HP.580010505\"> </a></td><td>Limitation of movement at ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0010501<a name=\"hpo-HP.580010501\"> </a></td><td>Limitation of knee mobility</td></tr><tr><td style=\"white-space:nowrap\">HP:0009896<a name=\"hpo-HP.580009896\"> </a></td><td>Abnormality of the antitragus</td></tr><tr><td style=\"white-space:nowrap\">HP:0004404<a name=\"hpo-HP.580004404\"> </a></td><td>Abnormal nipple morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011957<a name=\"hpo-HP.580011957\"> </a></td><td>Abnormal pectoral muscle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000777<a name=\"hpo-HP.580000777\"> </a></td><td>Abnormality of the thymus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000418<a name=\"hpo-HP.580000418\"> </a></td><td>Narrow nasal ridge</td></tr><tr><td style=\"white-space:nowrap\">HP:0001572<a name=\"hpo-HP.580001572\"> </a></td><td>Macrodontia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002967<a name=\"hpo-HP.580002967\"> </a></td><td>Cubitus valgus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000988<a name=\"hpo-HP.580000988\"> </a></td><td>Skin rash</td></tr><tr><td style=\"white-space:nowrap\">HP:0009733<a name=\"hpo-HP.580009733\"> </a></td><td>Glioma</td></tr><tr><td style=\"white-space:nowrap\">HP:0012452<a name=\"hpo-HP.580012452\"> </a></td><td>Restless legs</td></tr><tr><td style=\"white-space:nowrap\">HP:0100031<a name=\"hpo-HP.580100031\"> </a></td><td>Neoplasm of the thyroid gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0030127<a name=\"hpo-HP.580030127\"> </a></td><td>Endometriosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000123<a name=\"hpo-HP.580000123\"> </a></td><td>Nephritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001974<a name=\"hpo-HP.580001974\"> </a></td><td>Leukocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010976<a name=\"hpo-HP.580010976\"> </a></td><td>B lymphocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000010<a name=\"hpo-HP.580000010\"> </a></td><td>Recurrent urinary tract infections</td></tr><tr><td style=\"white-space:nowrap\">HP:0100807<a name=\"hpo-HP.580100807\"> </a></td><td>Long fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0000653<a name=\"hpo-HP.580000653\"> </a></td><td>Sparse eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0000171<a name=\"hpo-HP.580000171\"> </a></td><td>Microglossia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002575<a name=\"hpo-HP.580002575\"> </a></td><td>Tracheoesophageal fistula</td></tr><tr><td style=\"white-space:nowrap\">HP:0009933<a name=\"hpo-HP.580009933\"> </a></td><td>Narrow naris</td></tr><tr><td style=\"white-space:nowrap\">HP:0000883<a name=\"hpo-HP.580000883\"> </a></td><td>Thin ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000121<a name=\"hpo-HP.580000121\"> </a></td><td>Nephrocalcinosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001349<a name=\"hpo-HP.580001349\"> </a></td><td>Facial diplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012037<a name=\"hpo-HP.580012037\"> </a></td><td>Pectoralis amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100560<a name=\"hpo-HP.580100560\"> </a></td><td>Upper limb asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0005684<a name=\"hpo-HP.580005684\"> </a></td><td>Distal arthrogryposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0010722<a name=\"hpo-HP.580010722\"> </a></td><td>Asymmetry of the ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0009380<a name=\"hpo-HP.580009380\"> </a></td><td>Aplasia of the fingers</td></tr><tr><td style=\"white-space:nowrap\">HP:0001657<a name=\"hpo-HP.580001657\"> </a></td><td>Prolonged QT interval</td></tr><tr><td style=\"white-space:nowrap\">HP:0002040<a name=\"hpo-HP.580002040\"> </a></td><td>Esophageal varix</td></tr><tr><td style=\"white-space:nowrap\">HP:0000613<a name=\"hpo-HP.580000613\"> </a></td><td>Photophobia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000561<a name=\"hpo-HP.580000561\"> </a></td><td>Absent eyelashes</td></tr><tr><td style=\"white-space:nowrap\">HP:0002223<a name=\"hpo-HP.580002223\"> </a></td><td>Absent eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0002591<a name=\"hpo-HP.580002591\"> </a></td><td>Polyphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002373<a name=\"hpo-HP.580002373\"> </a></td><td>Febrile seizure (within the age range of 3 months to 6 years)</td></tr><tr><td style=\"white-space:nowrap\">HP:0002419<a name=\"hpo-HP.580002419\"> </a></td><td>Molar tooth sign on MRI</td></tr><tr><td style=\"white-space:nowrap\">HP:0001010<a name=\"hpo-HP.580001010\"> </a></td><td>Hypopigmentation of the skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0005772<a name=\"hpo-HP.580005772\"> </a></td><td>Aplasia/Hypoplasia of the tibia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002211<a name=\"hpo-HP.580002211\"> </a></td><td>White forelock</td></tr><tr><td style=\"white-space:nowrap\">HP:0007126<a name=\"hpo-HP.580007126\"> </a></td><td>Proximal amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003798<a name=\"hpo-HP.580003798\"> </a></td><td>Nemaline bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0006533<a name=\"hpo-HP.580006533\"> </a></td><td>Bronchodysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003391<a name=\"hpo-HP.580003391\"> </a></td><td>Gowers sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0000771<a name=\"hpo-HP.580000771\"> </a></td><td>Gynecomastia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100785<a name=\"hpo-HP.580100785\"> </a></td><td>Insomnia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010529<a name=\"hpo-HP.580010529\"> </a></td><td>Echolalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000363<a name=\"hpo-HP.580000363\"> </a></td><td>Abnormality of earlobe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002612<a name=\"hpo-HP.580002612\"> </a></td><td>Congenital hepatic fibrosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006721<a name=\"hpo-HP.580006721\"> </a></td><td>Acute lymphoblastic leukemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001958<a name=\"hpo-HP.580001958\"> </a></td><td>Nonketotic hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003457<a name=\"hpo-HP.580003457\"> </a></td><td>EMG abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0010636<a name=\"hpo-HP.580010636\"> </a></td><td>Schizencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005266<a name=\"hpo-HP.580005266\"> </a></td><td>Intestinal polyp</td></tr><tr><td style=\"white-space:nowrap\">HP:0200063<a name=\"hpo-HP.580200063\"> </a></td><td>Colorectal polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001762<a name=\"hpo-HP.580001762\"> </a></td><td>Talipes equinovarus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000056<a name=\"hpo-HP.580000056\"> </a></td><td>Abnormality of the clitoris</td></tr><tr><td style=\"white-space:nowrap\">HP:0008655<a name=\"hpo-HP.580008655\"> </a></td><td>Aplasia/Hypoplasia of the fallopian tube</td></tr><tr><td style=\"white-space:nowrap\">HP:0002072<a name=\"hpo-HP.580002072\"> </a></td><td>Chorea</td></tr><tr><td style=\"white-space:nowrap\">HP:0008734<a name=\"hpo-HP.580008734\"> </a></td><td>Decreased testicular size</td></tr><tr><td style=\"white-space:nowrap\">HP:0002136<a name=\"hpo-HP.580002136\"> </a></td><td>Broad-based gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0010958<a name=\"hpo-HP.580010958\"> </a></td><td>Bilateral renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002510<a name=\"hpo-HP.580002510\"> </a></td><td>Spastic tetraplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003234<a name=\"hpo-HP.580003234\"> </a></td><td>Decreased plasma carnitine</td></tr><tr><td style=\"white-space:nowrap\">HP:0000720<a name=\"hpo-HP.580000720\"> </a></td><td>Mood swings</td></tr><tr><td style=\"white-space:nowrap\">HP:0012638<a name=\"hpo-HP.580012638\"> </a></td><td>Abnormal nervous system physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002803<a name=\"hpo-HP.580002803\"> </a></td><td>Congenital contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0000152<a name=\"hpo-HP.580000152\"> </a></td><td>Abnormality of head or neck</td></tr><tr><td style=\"white-space:nowrap\">HP:0004377<a name=\"hpo-HP.580004377\"> </a></td><td>Hematological neoplasm</td></tr><tr><td style=\"white-space:nowrap\">HP:0100006<a name=\"hpo-HP.580100006\"> </a></td><td>Neoplasm of the central nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0012759<a name=\"hpo-HP.580012759\"> </a></td><td>Neurodevelopmental abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0011805<a name=\"hpo-HP.580011805\"> </a></td><td>Abnormal skeletal muscle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003634<a name=\"hpo-HP.580003634\"> </a></td><td>Amyoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001507<a name=\"hpo-HP.580001507\"> </a></td><td>Growth abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0001939<a name=\"hpo-HP.580001939\"> </a></td><td>Abnormality of metabolism/homeostasis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011013<a name=\"hpo-HP.580011013\"> </a></td><td>Abnormal circulating carbohydrate concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0410008<a name=\"hpo-HP.580410008\"> </a></td><td>Abnormality of the peripheral nervous system</td></tr><tr><td style=\"white-space:nowrap\">HP:0200134<a name=\"hpo-HP.580200134\"> </a></td><td>Epileptic encephalopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001881<a name=\"hpo-HP.580001881\"> </a></td><td>Abnormal leukocyte morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0005549<a name=\"hpo-HP.580005549\"> </a></td><td>obsolete Congenital neutropenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004439<a name=\"hpo-HP.580004439\"> </a></td><td>Craniofacial dysostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012443<a name=\"hpo-HP.580012443\"> </a></td><td>Abnormality of brain morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000202<a name=\"hpo-HP.580000202\"> </a></td><td>Oral cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0011842<a name=\"hpo-HP.580011842\"> </a></td><td>Abnormality of skeletal morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0003808<a name=\"hpo-HP.580003808\"> </a></td><td>Abnormal muscle tone</td></tr><tr><td style=\"white-space:nowrap\">HP:0001574<a name=\"hpo-HP.580001574\"> </a></td><td>Abnormality of the integument</td></tr><tr><td style=\"white-space:nowrap\">HP:0030056<a name=\"hpo-HP.580030056\"> </a></td><td>Uncombable hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0003549<a name=\"hpo-HP.580003549\"> </a></td><td>Abnormality of connective tissue</td></tr><tr><td style=\"white-space:nowrap\">HP:0030875<a name=\"hpo-HP.580030875\"> </a></td><td>Abnormality of pulmonary circulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000118<a name=\"hpo-HP.580000118\"> </a></td><td>Phenotypic abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0012469<a name=\"hpo-HP.580012469\"> </a></td><td>Infantile spasms</td></tr><tr><td style=\"white-space:nowrap\">HP:0032894<a name=\"hpo-HP.580032894\"> </a></td><td>Seizure precipitated by febrile infection</td></tr><tr><td style=\"white-space:nowrap\">HP:0100661<a name=\"hpo-HP.580100661\"> </a></td><td>Trigeminal neuralgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012207<a name=\"hpo-HP.580012207\"> </a></td><td>Reduced sperm motility</td></tr><tr><td style=\"white-space:nowrap\">HP:0000798<a name=\"hpo-HP.580000798\"> </a></td><td>Oligospermia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012864<a name=\"hpo-HP.580012864\"> </a></td><td>Abnormal sperm morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008232<a name=\"hpo-HP.580008232\"> </a></td><td>Elevated circulating follicle stimulating hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0040306<a name=\"hpo-HP.580040306\"> </a></td><td>Decreased male libido</td></tr><tr><td style=\"white-space:nowrap\">HP:0012208<a name=\"hpo-HP.580012208\"> </a></td><td>Immotile sperm</td></tr><tr><td style=\"white-space:nowrap\">HP:0000027<a name=\"hpo-HP.580000027\"> </a></td><td>Azoospermia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000870<a name=\"hpo-HP.580000870\"> </a></td><td>Increased circulating prolactin concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0008187<a name=\"hpo-HP.580008187\"> </a></td><td>Absence of secondary sex characteristics</td></tr><tr><td style=\"white-space:nowrap\">HP:0010469<a name=\"hpo-HP.580010469\"> </a></td><td>Absent testis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011969<a name=\"hpo-HP.580011969\"> </a></td><td>Elevated circulating luteinizing hormone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0040171<a name=\"hpo-HP.580040171\"> </a></td><td>Decreased serum testosterone level</td></tr><tr><td style=\"white-space:nowrap\">HP:0003251<a name=\"hpo-HP.580003251\"> </a></td><td>Male infertility</td></tr><tr><td style=\"white-space:nowrap\">HP:0009804<a name=\"hpo-HP.580009804\"> </a></td><td>Reduced number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0000548<a name=\"hpo-HP.580000548\"> </a></td><td>Cone/cone-rod dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000546<a name=\"hpo-HP.580000546\"> </a></td><td>Retinal degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0008002<a name=\"hpo-HP.580008002\"> </a></td><td>Abnormality of macular pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000608<a name=\"hpo-HP.580000608\"> </a></td><td>Macular degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0030611<a name=\"hpo-HP.580030611\"> </a></td><td>Retinal pigment epithelial loss on macular OCT</td></tr><tr><td style=\"white-space:nowrap\">HP:0001135<a name=\"hpo-HP.580001135\"> </a></td><td>Chorioretinal dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030468<a name=\"hpo-HP.580030468\"> </a></td><td>Abnormal multifocal electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:00030532<a name=\"hpo-HP.5800030532\"> </a></td><td>Visual acuity test abnormality</td></tr><tr><td style=\"white-space:nowrap\">HP:0007401<a name=\"hpo-HP.580007401\"> </a></td><td>Macular atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030466<a name=\"hpo-HP.580030466\"> </a></td><td>Abnormal full-field electroretinogram</td></tr><tr><td style=\"white-space:nowrap\">HP:007737<a name=\"hpo-HP.58007737\"> </a></td><td>Bone spicule pigmentation of the retina</td></tr><tr><td style=\"white-space:nowrap\">HP:0011342<a name=\"hpo-HP.580011342\"> </a></td><td>Mild global developmental delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0030610<a name=\"hpo-HP.580030610\"> </a></td><td>Photoreceptor outer segment loss on macular OCT</td></tr><tr><td style=\"white-space:nowrap\">HP:0007722<a name=\"hpo-HP.580007722\"> </a></td><td>Retinal pigment epithelial atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0030493<a name=\"hpo-HP.580030493\"> </a></td><td>Abnormality of foveal pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0007843<a name=\"hpo-HP.580007843\"> </a></td><td>Attenuation of retinal blood vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0007754<a name=\"hpo-HP.580007754\"> </a></td><td>Macular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011509<a name=\"hpo-HP.580011509\"> </a></td><td>Macular hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0008527<a name=\"hpo-HP.580008527\"> </a></td><td>Congenital sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0200070<a name=\"hpo-HP.580200070\"> </a></td><td>Peripheral retinal atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0007793<a name=\"hpo-HP.580007793\"> </a></td><td>Granular macular appearance</td></tr><tr><td style=\"white-space:nowrap\">HP:0007987<a name=\"hpo-HP.580007987\"> </a></td><td>Progressive visual field defects</td></tr><tr><td style=\"white-space:nowrap\">HP:0100817<a name=\"hpo-HP.580100817\"> </a></td><td>Renovascular hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0007868<a name=\"hpo-HP.580007868\"> </a></td><td>obsolete Age-related macular degeneration</td></tr><tr><td style=\"white-space:nowrap\">HP:0030527<a name=\"hpo-HP.580030527\"> </a></td><td>Very severe constriction of peripheral visual field</td></tr><tr><td style=\"white-space:nowrap\">HP:0030551<a name=\"hpo-HP.580030551\"> </a></td><td>Visual acuity light perception with projection</td></tr><tr><td style=\"white-space:nowrap\">HP:0011505<a name=\"hpo-HP.580011505\"> </a></td><td>Cystoid macular edema</td></tr><tr><td style=\"white-space:nowrap\">HP:0010442<a name=\"hpo-HP.580010442\"> </a></td><td>Polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0007642<a name=\"hpo-HP.580007642\"> </a></td><td>Congenital stationary night blindness</td></tr><tr><td style=\"white-space:nowrap\">HP:0009073<a name=\"hpo-HP.580009073\"> </a></td><td>Progressive proximal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003741<a name=\"hpo-HP.580003741\"> </a></td><td>Congenital muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0100299<a name=\"hpo-HP.580100299\"> </a></td><td>Muscle fiber inclusion bodies</td></tr><tr><td style=\"white-space:nowrap\">HP:0003540<a name=\"hpo-HP.580003540\"> </a></td><td>Impaired platelet aggregation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010489<a name=\"hpo-HP.580010489\"> </a></td><td>Absent palmar crease</td></tr><tr><td style=\"white-space:nowrap\">HP:0009824<a name=\"hpo-HP.580009824\"> </a></td><td>Upper limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0002395<a name=\"hpo-HP.580002395\"> </a></td><td>Lower limb hyperreflexia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001138<a name=\"hpo-HP.580001138\"> </a></td><td>Optic neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0007103<a name=\"hpo-HP.580007103\"> </a></td><td>Hypointensity of cerebral white matter on MRI</td></tr><tr><td style=\"white-space:nowrap\">HP:0003458<a name=\"hpo-HP.580003458\"> </a></td><td>EMG: myopathic abnormalities</td></tr><tr><td style=\"white-space:nowrap\">HP:0002987<a name=\"hpo-HP.580002987\"> </a></td><td>Elbow flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0006466<a name=\"hpo-HP.580006466\"> </a></td><td>Ankle flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0008458<a name=\"hpo-HP.580008458\"> </a></td><td>Progressive congenital scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000473<a name=\"hpo-HP.580000473\"> </a></td><td>Torticollis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011800<a name=\"hpo-HP.580011800\"> </a></td><td>Midface retrusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0000597<a name=\"hpo-HP.580000597\"> </a></td><td>Ophthalmoparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0005853<a name=\"hpo-HP.580005853\"> </a></td><td>Congenital foot contraction deformities</td></tr><tr><td style=\"white-space:nowrap\">HP:0007002<a name=\"hpo-HP.580007002\"> </a></td><td>Motor axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003327<a name=\"hpo-HP.580003327\"> </a></td><td>Axial muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003306<a name=\"hpo-HP.580003306\"> </a></td><td>Spinal rigidity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002068<a name=\"hpo-HP.580002068\"> </a></td><td>Neuromuscular dysphagia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001002<a name=\"hpo-HP.580001002\"> </a></td><td>obsolete Decreased subcutaneous fat</td></tr><tr><td style=\"white-space:nowrap\">HP:0002880<a name=\"hpo-HP.580002880\"> </a></td><td>obsolete Respiratory difficulties</td></tr><tr><td style=\"white-space:nowrap\">HP:0006829<a name=\"hpo-HP.580006829\"> </a></td><td>Severe muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011448<a name=\"hpo-HP.580011448\"> </a></td><td>Ankle clonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0003487<a name=\"hpo-HP.580003487\"> </a></td><td>Babinski sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0002378<a name=\"hpo-HP.580002378\"> </a></td><td>Hand tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002747<a name=\"hpo-HP.580002747\"> </a></td><td>Respiratory insufficiency due to muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002579<a name=\"hpo-HP.580002579\"> </a></td><td>Gastrointestinal dysmotility</td></tr><tr><td style=\"white-space:nowrap\">HP:0001041<a name=\"hpo-HP.580001041\"> </a></td><td>Facial erythema</td></tr><tr><td style=\"white-space:nowrap\">HP:0040180<a name=\"hpo-HP.580040180\"> </a></td><td>Hyperkeratosis pilaris</td></tr><tr><td style=\"white-space:nowrap\">HP:0001382<a name=\"hpo-HP.580001382\"> </a></td><td>Joint hypermobility</td></tr><tr><td style=\"white-space:nowrap\">HP:0003722<a name=\"hpo-HP.580003722\"> </a></td><td>Neck flexor weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003323<a name=\"hpo-HP.580003323\"> </a></td><td>Progressive muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002380<a name=\"hpo-HP.580002380\"> </a></td><td>Fasciculations</td></tr><tr><td style=\"white-space:nowrap\">HP:0012785<a name=\"hpo-HP.580012785\"> </a></td><td>Flexion contracture of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0007936<a name=\"hpo-HP.580007936\"> </a></td><td>Restrictive external ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030319<a name=\"hpo-HP.580030319\"> </a></td><td>Weakness of facial musculature</td></tr><tr><td style=\"white-space:nowrap\">HP:0008936<a name=\"hpo-HP.580008936\"> </a></td><td>Muscular hypotonia of the trunk</td></tr><tr><td style=\"white-space:nowrap\">HP:0030230<a name=\"hpo-HP.580030230\"> </a></td><td>Central core regions in muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0011471<a name=\"hpo-HP.580011471\"> </a></td><td>Gastrostomy tube feeding in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001290<a name=\"hpo-HP.580001290\"> </a></td><td>Generalized hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002421<a name=\"hpo-HP.580002421\"> </a></td><td>Poor head control</td></tr><tr><td style=\"white-space:nowrap\">HP:0010301<a name=\"hpo-HP.580010301\"> </a></td><td>Spinal dysraphism</td></tr><tr><td style=\"white-space:nowrap\">HP:0004303<a name=\"hpo-HP.580004303\"> </a></td><td>Abnormal muscle fiber morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009046<a name=\"hpo-HP.580009046\"> </a></td><td>Difficulty running</td></tr><tr><td style=\"white-space:nowrap\">HP:0003715<a name=\"hpo-HP.580003715\"> </a></td><td>Myofibrillar myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000467<a name=\"hpo-HP.580000467\"> </a></td><td>Neck muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0001999<a name=\"hpo-HP.580001999\"> </a></td><td>Abnormal facial shape</td></tr><tr><td style=\"white-space:nowrap\">HP:0002751<a name=\"hpo-HP.580002751\"> </a></td><td>Kyphoscoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030223<a name=\"hpo-HP.580030223\"> </a></td><td>Perseveration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002344<a name=\"hpo-HP.580002344\"> </a></td><td>Progressive neurologic deterioration</td></tr><tr><td style=\"white-space:nowrap\">HP:0002522<a name=\"hpo-HP.580002522\"> </a></td><td>Areflexia of lower limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0003805<a name=\"hpo-HP.580003805\"> </a></td><td>Rimmed vacuoles</td></tr><tr><td style=\"white-space:nowrap\">HP:0005781<a name=\"hpo-HP.580005781\"> </a></td><td>Contractures of the large joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0040083<a name=\"hpo-HP.580040083\"> </a></td><td>Toe walking</td></tr><tr><td style=\"white-space:nowrap\">HP:0003749<a name=\"hpo-HP.580003749\"> </a></td><td>Pelvic girdle muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0012444<a name=\"hpo-HP.580012444\"> </a></td><td>Brain atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003738<a name=\"hpo-HP.580003738\"> </a></td><td>Exercise-induced myalgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003756<a name=\"hpo-HP.580003756\"> </a></td><td>Skeletal myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002492<a name=\"hpo-HP.580002492\"> </a></td><td>Morphological abnormality of the corticospinal tract</td></tr><tr><td style=\"white-space:nowrap\">HP:0100302<a name=\"hpo-HP.580100302\"> </a></td><td>Muscle fiber tubuloreticular inclusions</td></tr><tr><td style=\"white-space:nowrap\">HP:0006817<a name=\"hpo-HP.580006817\"> </a></td><td>Aplasia/Hypoplasia of the cerebellar vermis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003473<a name=\"hpo-HP.580003473\"> </a></td><td>Fatigable weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002077<a name=\"hpo-HP.580002077\"> </a></td><td>Migraine with aura</td></tr><tr><td style=\"white-space:nowrap\">HP:0100559<a name=\"hpo-HP.580100559\"> </a></td><td>Lower limb asymmetry</td></tr><tr><td style=\"white-space:nowrap\">HP:0002079<a name=\"hpo-HP.580002079\"> </a></td><td>Hypoplasia of the corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0002804<a name=\"hpo-HP.580002804\"> </a></td><td>Arthrogryposis multiplex congenita</td></tr><tr><td style=\"white-space:nowrap\">HP:0011623<a name=\"hpo-HP.580011623\"> </a></td><td>Muscular ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0002191<a name=\"hpo-HP.580002191\"> </a></td><td>Progressive spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003390<a name=\"hpo-HP.580003390\"> </a></td><td>Sensory axonal neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006986<a name=\"hpo-HP.580006986\"> </a></td><td>Upper limb spasticity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002464<a name=\"hpo-HP.580002464\"> </a></td><td>Spastic dysarthria</td></tr><tr><td style=\"white-space:nowrap\">HP:0001308<a name=\"hpo-HP.580001308\"> </a></td><td>Tongue fasciculations</td></tr><tr><td style=\"white-space:nowrap\">HP:0007010<a name=\"hpo-HP.580007010\"> </a></td><td>Poor fine motor coordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0003737<a name=\"hpo-HP.580003737\"> </a></td><td>Mitochondrial myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0008012<a name=\"hpo-HP.580008012\"> </a></td><td>obsolete Congenital myopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008872<a name=\"hpo-HP.580008872\"> </a></td><td>Feeding difficulties in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005750<a name=\"hpo-HP.580005750\"> </a></td><td>Contractures of the joints of the lower limbs</td></tr><tr><td style=\"white-space:nowrap\">HP:0009067<a name=\"hpo-HP.580009067\"> </a></td><td>Progressive spinal muscular atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001623<a name=\"hpo-HP.580001623\"> </a></td><td>Breech presentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001374<a name=\"hpo-HP.580001374\"> </a></td><td>Congenital hip dislocation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002359<a name=\"hpo-HP.580002359\"> </a></td><td>Frequent falls</td></tr><tr><td style=\"white-space:nowrap\">HP:0003803<a name=\"hpo-HP.580003803\"> </a></td><td>Type 1 muscle fiber predominance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011410<a name=\"hpo-HP.580011410\"> </a></td><td>Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0008947<a name=\"hpo-HP.580008947\"> </a></td><td>Infantile muscular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100501<a name=\"hpo-HP.580100501\"> </a></td><td>Recurrent bronchiolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003789<a name=\"hpo-HP.580003789\"> </a></td><td>Minicore myopathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000544<a name=\"hpo-HP.580000544\"> </a></td><td>External ophthalmoplegia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001605<a name=\"hpo-HP.580001605\"> </a></td><td>Vocal cord paralysis</td></tr><tr><td style=\"white-space:nowrap\">HP:0003712<a name=\"hpo-HP.580003712\"> </a></td><td>Skeletal muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0012507<a name=\"hpo-HP.580012507\"> </a></td><td>Weakness of orbicularis oculi muscle</td></tr><tr><td style=\"white-space:nowrap\">HP:0009816<a name=\"hpo-HP.580009816\"> </a></td><td>Lower limb undergrowth</td></tr><tr><td style=\"white-space:nowrap\">HP:0008935<a name=\"hpo-HP.580008935\"> </a></td><td>Generalized neonatal hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003484<a name=\"hpo-HP.580003484\"> </a></td><td>Upper limb muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0008331<a name=\"hpo-HP.580008331\"> </a></td><td>Elevated creatine kinase after exercise</td></tr><tr><td style=\"white-space:nowrap\">HP:0001315<a name=\"hpo-HP.580001315\"> </a></td><td>Reduced tendon reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0012473<a name=\"hpo-HP.580012473\"> </a></td><td>Tongue atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0003273<a name=\"hpo-HP.580003273\"> </a></td><td>Hip contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0006380<a name=\"hpo-HP.580006380\"> </a></td><td>Knee flexion contracture</td></tr><tr><td style=\"white-space:nowrap\">HP:0003752<a name=\"hpo-HP.580003752\"> </a></td><td>Episodic flaccid weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0100298<a name=\"hpo-HP.580100298\"> </a></td><td>Motheaten muscle fibers</td></tr><tr><td style=\"white-space:nowrap\">HP:0003693<a name=\"hpo-HP.580003693\"> </a></td><td>Distal amyotrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002167<a name=\"hpo-HP.580002167\"> </a></td><td>Neurological speech impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0003388<a name=\"hpo-HP.580003388\"> </a></td><td>Easy fatigability</td></tr><tr><td style=\"white-space:nowrap\">HP:0001348<a name=\"hpo-HP.580001348\"> </a></td><td>Brisk reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0003445<a name=\"hpo-HP.580003445\"> </a></td><td>EMG: neuropathic changes</td></tr><tr><td style=\"white-space:nowrap\">HP:0009063<a name=\"hpo-HP.580009063\"> </a></td><td>Progressive distal muscle weakness</td></tr><tr><td style=\"white-space:nowrap\">HP:0003720<a name=\"hpo-HP.580003720\"> </a></td><td>Generalized muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002493<a name=\"hpo-HP.580002493\"> </a></td><td>Upper motor neuron dysfunction</td></tr><tr><td style=\"white-space:nowrap\">HP:0012448<a name=\"hpo-HP.580012448\"> </a></td><td>Delayed myelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0001338<a name=\"hpo-HP.580001338\"> </a></td><td>Partial agenesis of the corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0006879<a name=\"hpo-HP.580006879\"> </a></td><td>Pontocerebellar atrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0200101<a name=\"hpo-HP.580200101\"> </a></td><td>Decreased/absent ankle reflexes</td></tr><tr><td style=\"white-space:nowrap\">HP:0009020<a name=\"hpo-HP.580009020\"> </a></td><td>Exercise-induced muscle fatigue</td></tr><tr><td style=\"white-space:nowrap\">HP:0002067<a name=\"hpo-HP.580002067\"> </a></td><td>Bradykinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012751<a name=\"hpo-HP.580012751\"> </a></td><td>Abnormal basal ganglia MRI signal intensity</td></tr><tr><td style=\"white-space:nowrap\">HP:0003355<a name=\"hpo-HP.580003355\"> </a></td><td>Aminoaciduria</td></tr><tr><td style=\"white-space:nowrap\">HP:0012450<a name=\"hpo-HP.580012450\"> </a></td><td>Chronic constipation</td></tr><tr><td style=\"white-space:nowrap\">HP:0011834<a name=\"hpo-HP.580011834\"> </a></td><td>Moyamoya phenomenon</td></tr><tr><td style=\"white-space:nowrap\">HP:0001297<a name=\"hpo-HP.580001297\"> </a></td><td>Stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0200049<a name=\"hpo-HP.580200049\"> </a></td><td>Upper limb hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008981<a name=\"hpo-HP.580008981\"> </a></td><td>Calf muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006785<a name=\"hpo-HP.580006785\"> </a></td><td>Limb-girdle muscular dystrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006957<a name=\"hpo-HP.580006957\"> </a></td><td>Loss of ability to walk</td></tr><tr><td style=\"white-space:nowrap\">HP:0030098<a name=\"hpo-HP.580030098\"> </a></td><td>Reduced muscle dystrophin expression</td></tr><tr><td style=\"white-space:nowrap\">HP:0030115<a name=\"hpo-HP.580030115\"> </a></td><td>Reduced muscle fiber dysferlin</td></tr><tr><td style=\"white-space:nowrap\">HP:0002058<a name=\"hpo-HP.580002058\"> </a></td><td>Myopathic facies</td></tr><tr><td style=\"white-space:nowrap\">HP:0007858<a name=\"hpo-HP.580007858\"> </a></td><td>Chorioretinal lacunae</td></tr><tr><td style=\"white-space:nowrap\">HP:0006657<a name=\"hpo-HP.580006657\"> </a></td><td>Hypoplasia of first ribs</td></tr><tr><td style=\"white-space:nowrap\">HP:0007165<a name=\"hpo-HP.580007165\"> </a></td><td>Periventricular heterotopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0009779<a name=\"hpo-HP.580009779\"> </a></td><td>3-4 toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010665<a name=\"hpo-HP.580010665\"> </a></td><td>Bilateral coxa valga</td></tr><tr><td style=\"white-space:nowrap\">HP:0007598<a name=\"hpo-HP.580007598\"> </a></td><td>Bilateral single transverse palmar creases</td></tr><tr><td style=\"white-space:nowrap\">HP:0006101<a name=\"hpo-HP.580006101\"> </a></td><td>Finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010511<a name=\"hpo-HP.580010511\"> </a></td><td>Long toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002370<a name=\"hpo-HP.580002370\"> </a></td><td>Poor coordination</td></tr><tr><td style=\"white-space:nowrap\">HP:0000480<a name=\"hpo-HP.580000480\"> </a></td><td>Retinal coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001770<a name=\"hpo-HP.580001770\"> </a></td><td>Toe syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010851<a name=\"hpo-HP.580010851\"> </a></td><td>EEG with burst suppression</td></tr><tr><td style=\"white-space:nowrap\">HP:0002791<a name=\"hpo-HP.580002791\"> </a></td><td>Hypoventilation</td></tr><tr><td style=\"white-space:nowrap\">HP:0040075<a name=\"hpo-HP.580040075\"> </a></td><td>Hypopituitarism</td></tr><tr><td style=\"white-space:nowrap\">HP:0012506<a name=\"hpo-HP.580012506\"> </a></td><td>Small pituitary gland</td></tr><tr><td style=\"white-space:nowrap\">HP:0000538<a name=\"hpo-HP.580000538\"> </a></td><td>Pseudopapilledema</td></tr><tr><td style=\"white-space:nowrap\">HP:0012717<a name=\"hpo-HP.580012717\"> </a></td><td>Severe conductive hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001370<a name=\"hpo-HP.580001370\"> </a></td><td>Rheumatoid arthritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000016<a name=\"hpo-HP.580000016\"> </a></td><td>Urinary retention</td></tr><tr><td style=\"white-space:nowrap\">HP:0012537<a name=\"hpo-HP.580012537\"> </a></td><td>Food intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0011297<a name=\"hpo-HP.580011297\"> </a></td><td>Abnormal digit morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001273<a name=\"hpo-HP.580001273\"> </a></td><td>Abnormal corpus callosum morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0030148<a name=\"hpo-HP.580030148\"> </a></td><td>Heart murmur</td></tr><tr><td style=\"white-space:nowrap\">HP:0045018<a name=\"hpo-HP.580045018\"> </a></td><td>Partial duplication of eyebrows</td></tr><tr><td style=\"white-space:nowrap\">HP:0008998<a name=\"hpo-HP.580008998\"> </a></td><td>Pectoralis hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001707<a name=\"hpo-HP.580001707\"> </a></td><td>Abnormal right ventricle morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0001540<a name=\"hpo-HP.580001540\"> </a></td><td>Diastasis recti</td></tr><tr><td style=\"white-space:nowrap\">HP:0100693<a name=\"hpo-HP.580100693\"> </a></td><td>Iridodonesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002265<a name=\"hpo-HP.580002265\"> </a></td><td>Large fleshy ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001132<a name=\"hpo-HP.580001132\"> </a></td><td>Lens subluxation</td></tr><tr><td style=\"white-space:nowrap\">HP:0004927<a name=\"hpo-HP.580004927\"> </a></td><td>Pulmonary artery dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005619<a name=\"hpo-HP.580005619\"> </a></td><td>Thoracolumbar kyphosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008619<a name=\"hpo-HP.580008619\"> </a></td><td>Bilateral sensorineural hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0001045<a name=\"hpo-HP.580001045\"> </a></td><td>Vitiligo</td></tr><tr><td style=\"white-space:nowrap\">HP:0009124<a name=\"hpo-HP.580009124\"> </a></td><td>Abnormal adipose tissue morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002979<a name=\"hpo-HP.580002979\"> </a></td><td>Bowing of the legs</td></tr><tr><td style=\"white-space:nowrap\">HP:0000455<a name=\"hpo-HP.580000455\"> </a></td><td>Broad nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001007<a name=\"hpo-HP.580001007\"> </a></td><td>Hirsutism</td></tr><tr><td style=\"white-space:nowrap\">HP:0010314<a name=\"hpo-HP.580010314\"> </a></td><td>Premature thelarche</td></tr><tr><td style=\"white-space:nowrap\">HP:0000075<a name=\"hpo-HP.580000075\"> </a></td><td>Renal duplication</td></tr><tr><td style=\"white-space:nowrap\">HP:0000368<a name=\"hpo-HP.580000368\"> </a></td><td>Low-set, posteriorly rotated ears</td></tr><tr><td style=\"white-space:nowrap\">HP:0001052<a name=\"hpo-HP.580001052\"> </a></td><td>Nevus flammeus</td></tr><tr><td style=\"white-space:nowrap\">HP:0200048<a name=\"hpo-HP.580200048\"> </a></td><td>Cyanotic episode</td></tr><tr><td style=\"white-space:nowrap\">HP:0001902<a name=\"hpo-HP.580001902\"> </a></td><td>Giant platelets</td></tr><tr><td style=\"white-space:nowrap\">HP:0030043<a name=\"hpo-HP.580030043\"> </a></td><td>Hip subluxation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002938<a name=\"hpo-HP.580002938\"> </a></td><td>Lumbar hyperlordosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0030084<a name=\"hpo-HP.580030084\"> </a></td><td>Clinodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005560<a name=\"hpo-HP.580005560\"> </a></td><td>Imbalanced hemoglobin synthesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001539<a name=\"hpo-HP.580001539\"> </a></td><td>Omphalocele</td></tr><tr><td style=\"white-space:nowrap\">HP:0009778<a name=\"hpo-HP.580009778\"> </a></td><td>Short thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0002277<a name=\"hpo-HP.580002277\"> </a></td><td>Horner syndrome</td></tr><tr><td style=\"white-space:nowrap\">HP:0011701<a name=\"hpo-HP.580011701\"> </a></td><td>Multifocal atrial tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005274<a name=\"hpo-HP.580005274\"> </a></td><td>Prominent nasal tip</td></tr><tr><td style=\"white-space:nowrap\">HP:0001262<a name=\"hpo-HP.580001262\"> </a></td><td>Excessive daytime somnolence</td></tr><tr><td style=\"white-space:nowrap\">HP:0001285<a name=\"hpo-HP.580001285\"> </a></td><td>Spastic tetraparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012171<a name=\"hpo-HP.580012171\"> </a></td><td>Stereotypical hand wringing</td></tr><tr><td style=\"white-space:nowrap\">HP:0002518<a name=\"hpo-HP.580002518\"> </a></td><td>Abnormality of the periventricular white matter</td></tr><tr><td style=\"white-space:nowrap\">HP:0005692<a name=\"hpo-HP.580005692\"> </a></td><td>Joint hyperflexibility</td></tr><tr><td style=\"white-space:nowrap\">HP:0007440<a name=\"hpo-HP.580007440\"> </a></td><td>Generalized hyperpigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001805<a name=\"hpo-HP.580001805\"> </a></td><td>Onychogryposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011945<a name=\"hpo-HP.580011945\"> </a></td><td>Bronchiolitis obliterans organizing pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003763<a name=\"hpo-HP.580003763\"> </a></td><td>Bruxism</td></tr><tr><td style=\"white-space:nowrap\">HP:0010500<a name=\"hpo-HP.580010500\"> </a></td><td>Hyperextensibility of the knee</td></tr><tr><td style=\"white-space:nowrap\">HP:0040115<a name=\"hpo-HP.580040115\"> </a></td><td>Abnormality of the Eustachian tube</td></tr><tr><td style=\"white-space:nowrap\">HP:0008751<a name=\"hpo-HP.580008751\"> </a></td><td>Laryngeal cleft</td></tr><tr><td style=\"white-space:nowrap\">HP:0000403<a name=\"hpo-HP.580000403\"> </a></td><td>Recurrent otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0001787<a name=\"hpo-HP.580001787\"> </a></td><td>Abnormal delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0002571<a name=\"hpo-HP.580002571\"> </a></td><td>Achalasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002615<a name=\"hpo-HP.580002615\"> </a></td><td>Hypotension</td></tr><tr><td style=\"white-space:nowrap\">HP:0003550<a name=\"hpo-HP.580003550\"> </a></td><td>Predominantly lower limb lymphedema</td></tr><tr><td style=\"white-space:nowrap\">HP:0030363<a name=\"hpo-HP.580030363\"> </a></td><td>Primary Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0001727<a name=\"hpo-HP.580001727\"> </a></td><td>Thromboembolic stroke</td></tr><tr><td style=\"white-space:nowrap\">HP:0100603<a name=\"hpo-HP.580100603\"> </a></td><td>Toxemia of pregnancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0010836<a name=\"hpo-HP.580010836\"> </a></td><td>Abnormal circulating copper concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0000356<a name=\"hpo-HP.580000356\"> </a></td><td>Abnormality of the outer ear</td></tr><tr><td style=\"white-space:nowrap\">HP:0002197<a name=\"hpo-HP.580002197\"> </a></td><td>Generalized-onset seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011436<a name=\"hpo-HP.580011436\"> </a></td><td>Abnormal maternal serum screening</td></tr><tr><td style=\"white-space:nowrap\">HP:0003517<a name=\"hpo-HP.580003517\"> </a></td><td>Birth length greater than 97th percentile</td></tr><tr><td style=\"white-space:nowrap\">HP:0003561<a name=\"hpo-HP.580003561\"> </a></td><td>Birth length less than 3rd percentile</td></tr><tr><td style=\"white-space:nowrap\">HP:0012188<a name=\"hpo-HP.580012188\"> </a></td><td>Hyperemesis gravidarum</td></tr><tr><td style=\"white-space:nowrap\">HP:0010519<a name=\"hpo-HP.580010519\"> </a></td><td>Increased fetal movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0030244<a name=\"hpo-HP.580030244\"> </a></td><td>Maternal fever in pregnancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0008071<a name=\"hpo-HP.580008071\"> </a></td><td>Maternal hypertension</td></tr><tr><td style=\"white-space:nowrap\">HP:0100622<a name=\"hpo-HP.580100622\"> </a></td><td>Maternal seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0011438<a name=\"hpo-HP.580011438\"> </a></td><td>Maternal teratogenic exposure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001998<a name=\"hpo-HP.580001998\"> </a></td><td>Neonatal hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0040187<a name=\"hpo-HP.580040187\"> </a></td><td>Neonatal sepsis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002033<a name=\"hpo-HP.580002033\"> </a></td><td>Poor suck</td></tr><tr><td style=\"white-space:nowrap\">HP:0006579<a name=\"hpo-HP.580006579\"> </a></td><td>Prolonged neonatal jaundice</td></tr><tr><td style=\"white-space:nowrap\">HP:0001724<a name=\"hpo-HP.580001724\"> </a></td><td>obsolete Aortic dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010621<a name=\"hpo-HP.580010621\"> </a></td><td>Cutaneous syndactyly of toes</td></tr><tr><td style=\"white-space:nowrap\">HP:0001880<a name=\"hpo-HP.580001880\"> </a></td><td>Eosinophilia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000162<a name=\"hpo-HP.580000162\"> </a></td><td>Glossoptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100578<a name=\"hpo-HP.580100578\"> </a></td><td>Lipoatrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0002562<a name=\"hpo-HP.580002562\"> </a></td><td>Low-set nipples</td></tr><tr><td style=\"white-space:nowrap\">HP:0012893<a name=\"hpo-HP.580012893\"> </a></td><td>Neck muscle hypertrophy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001027<a name=\"hpo-HP.580001027\"> </a></td><td>Soft, doughy skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0100738<a name=\"hpo-HP.580100738\"> </a></td><td>Abnormal eating behavior</td></tr><tr><td style=\"white-space:nowrap\">HP:0007328<a name=\"hpo-HP.580007328\"> </a></td><td>Impaired pain sensation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002878<a name=\"hpo-HP.580002878\"> </a></td><td>Respiratory failure</td></tr><tr><td style=\"white-space:nowrap\">HP:0001776<a name=\"hpo-HP.580001776\"> </a></td><td>Bilateral talipes equinovarus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001360<a name=\"hpo-HP.580001360\"> </a></td><td>Holoprosencephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0001973<a name=\"hpo-HP.580001973\"> </a></td><td>Autoimmune thrombocytopenia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100749<a name=\"hpo-HP.580100749\"> </a></td><td>Chest pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0012531<a name=\"hpo-HP.580012531\"> </a></td><td>Pain</td></tr><tr><td style=\"white-space:nowrap\">HP:0007585<a name=\"hpo-HP.580007585\"> </a></td><td>Skin fragility with non-scarring blistering</td></tr><tr><td style=\"white-space:nowrap\">HP:0002108<a name=\"hpo-HP.580002108\"> </a></td><td>Spontaneous pneumothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0006562<a name=\"hpo-HP.580006562\"> </a></td><td>Viral hepatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012647<a name=\"hpo-HP.580012647\"> </a></td><td>Abnormal inflammatory response</td></tr><tr><td style=\"white-space:nowrap\">HP:0012088<a name=\"hpo-HP.580012088\"> </a></td><td>Abnormal urinary odor</td></tr><tr><td style=\"white-space:nowrap\">HP:0011458<a name=\"hpo-HP.580011458\"> </a></td><td>Abdominal symptom</td></tr><tr><td style=\"white-space:nowrap\">HP:0002829<a name=\"hpo-HP.580002829\"> </a></td><td>Arthralgia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010783<a name=\"hpo-HP.580010783\"> </a></td><td>Erythema</td></tr><tr><td style=\"white-space:nowrap\">HP:0010307<a name=\"hpo-HP.580010307\"> </a></td><td>Stridor</td></tr><tr><td style=\"white-space:nowrap\">HP:0001269<a name=\"hpo-HP.580001269\"> </a></td><td>Hemiparesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006532<a name=\"hpo-HP.580006532\"> </a></td><td>Recurrent pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002580<a name=\"hpo-HP.580002580\"> </a></td><td>Volvulus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012387<a name=\"hpo-HP.580012387\"> </a></td><td>Bronchitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001266<a name=\"hpo-HP.580001266\"> </a></td><td>Choreoathetosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001531<a name=\"hpo-HP.580001531\"> </a></td><td>Failure to thrive in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011470<a name=\"hpo-HP.580011470\"> </a></td><td>Nasogastric tube feeding in infancy</td></tr><tr><td style=\"white-space:nowrap\">HP:0001361<a name=\"hpo-HP.580001361\"> </a></td><td>Nystagmus-induced head nodding</td></tr><tr><td style=\"white-space:nowrap\">HP:0001997<a name=\"hpo-HP.580001997\"> </a></td><td>Gout</td></tr><tr><td style=\"white-space:nowrap\">HP:0000965<a name=\"hpo-HP.580000965\"> </a></td><td>Cutis marmorata</td></tr><tr><td style=\"white-space:nowrap\">HP:0010316<a name=\"hpo-HP.580010316\"> </a></td><td>Ebstein anomaly of the tricuspid valve</td></tr><tr><td style=\"white-space:nowrap\">HP:0010543<a name=\"hpo-HP.580010543\"> </a></td><td>Opsoclonus</td></tr><tr><td style=\"white-space:nowrap\">HP:0007704<a name=\"hpo-HP.580007704\"> </a></td><td>Paroxysmal involuntary eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0030364<a name=\"hpo-HP.580030364\"> </a></td><td>Secondary Caesarian section</td></tr><tr><td style=\"white-space:nowrap\">HP:0007738<a name=\"hpo-HP.580007738\"> </a></td><td>Uncontrolled eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0030366<a name=\"hpo-HP.580030366\"> </a></td><td>Delivery by Odon device</td></tr><tr><td style=\"white-space:nowrap\">HP:0011411<a name=\"hpo-HP.580011411\"> </a></td><td>Forceps delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0030369<a name=\"hpo-HP.580030369\"> </a></td><td>Induced vaginal delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0005268<a name=\"hpo-HP.580005268\"> </a></td><td>Spontaneous abortion</td></tr><tr><td style=\"white-space:nowrap\">HP:0030365<a name=\"hpo-HP.580030365\"> </a></td><td>Vaginal birth after Caesarian</td></tr><tr><td style=\"white-space:nowrap\">HP:0011412<a name=\"hpo-HP.580011412\"> </a></td><td>Ventouse delivery</td></tr><tr><td style=\"white-space:nowrap\">HP:0002572<a name=\"hpo-HP.580002572\"> </a></td><td>Episodic vomiting</td></tr><tr><td style=\"white-space:nowrap\">HP:0030350<a name=\"hpo-HP.580030350\"> </a></td><td>Erythematous papule</td></tr><tr><td style=\"white-space:nowrap\">HP:0001386<a name=\"hpo-HP.580001386\"> </a></td><td>Joint swelling</td></tr><tr><td style=\"white-space:nowrap\">HP:0000147<a name=\"hpo-HP.580000147\"> </a></td><td>Polycystic ovaries</td></tr><tr><td style=\"white-space:nowrap\">HP:0012412<a name=\"hpo-HP.580012412\"> </a></td><td>Premature adrenarche</td></tr><tr><td style=\"white-space:nowrap\">HP:0004411<a name=\"hpo-HP.580004411\"> </a></td><td>Deviated nasal septum</td></tr><tr><td style=\"white-space:nowrap\">HP:0040183<a name=\"hpo-HP.580040183\"> </a></td><td>Encopresis</td></tr><tr><td style=\"white-space:nowrap\">HP:0100507<a name=\"hpo-HP.580100507\"> </a></td><td>Reduced blood folate concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0007011<a name=\"hpo-HP.580007011\"> </a></td><td>Fourth cranial nerve palsy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000375<a name=\"hpo-HP.580000375\"> </a></td><td>Abnormal cochlea morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009911<a name=\"hpo-HP.580009911\"> </a></td><td>Abnormal temporal bone morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000081<a name=\"hpo-HP.580000081\"> </a></td><td>Duplicated collecting system</td></tr><tr><td style=\"white-space:nowrap\">HP:0006894<a name=\"hpo-HP.580006894\"> </a></td><td>Hypoplastic olfactory lobes</td></tr><tr><td style=\"white-space:nowrap\">HP:0011380<a name=\"hpo-HP.580011380\"> </a></td><td>Morphological abnormality of the semicircular canal</td></tr><tr><td style=\"white-space:nowrap\">HP:0000110<a name=\"hpo-HP.580000110\"> </a></td><td>Renal dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030025<a name=\"hpo-HP.580030025\"> </a></td><td>Auricular pit</td></tr><tr><td style=\"white-space:nowrap\">HP:0010044<a name=\"hpo-HP.580010044\"> </a></td><td>Short 4th metacarpal</td></tr><tr><td style=\"white-space:nowrap\">HP:0010047<a name=\"hpo-HP.580010047\"> </a></td><td>Short 5th metacarpal</td></tr><tr><td style=\"white-space:nowrap\">HP:0000201<a name=\"hpo-HP.580000201\"> </a></td><td>Pierre-Robin sequence</td></tr><tr><td style=\"white-space:nowrap\">HP:0100837<a name=\"hpo-HP.580100837\"> </a></td><td>Atrophodermia vermiculata</td></tr><tr><td style=\"white-space:nowrap\">HP:0002673<a name=\"hpo-HP.580002673\"> </a></td><td>Coxa valga</td></tr><tr><td style=\"white-space:nowrap\">HP:0001476<a name=\"hpo-HP.580001476\"> </a></td><td>Delayed closure of the anterior fontanelle</td></tr><tr><td style=\"white-space:nowrap\">HP:0011069<a name=\"hpo-HP.580011069\"> </a></td><td>Increased number of teeth</td></tr><tr><td style=\"white-space:nowrap\">HP:0009879<a name=\"hpo-HP.580009879\"> </a></td><td>Simplified gyral pattern</td></tr><tr><td style=\"white-space:nowrap\">HP:0006315<a name=\"hpo-HP.580006315\"> </a></td><td>Single median maxillary incisor</td></tr><tr><td style=\"white-space:nowrap\">HP:0001194<a name=\"hpo-HP.580001194\"> </a></td><td>Abnormalities of placenta or umbilical cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0100767<a name=\"hpo-HP.580100767\"> </a></td><td>Abnormal placenta morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0006543<a name=\"hpo-HP.580006543\"> </a></td><td>Cardiorespiratory arrest</td></tr><tr><td style=\"white-space:nowrap\">HP:0003074<a name=\"hpo-HP.580003074\"> </a></td><td>Hyperglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000842<a name=\"hpo-HP.580000842\"> </a></td><td>Hyperinsulinemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011951<a name=\"hpo-HP.580011951\"> </a></td><td>Aspiration pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0006528<a name=\"hpo-HP.580006528\"> </a></td><td>Chronic lung disease</td></tr><tr><td style=\"white-space:nowrap\">HP:0002383<a name=\"hpo-HP.580002383\"> </a></td><td>Encephalitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0000388<a name=\"hpo-HP.580000388\"> </a></td><td>Otitis media</td></tr><tr><td style=\"white-space:nowrap\">HP:0002530<a name=\"hpo-HP.580002530\"> </a></td><td>Axial dystonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002780<a name=\"hpo-HP.580002780\"> </a></td><td>Bronchomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008755<a name=\"hpo-HP.580008755\"> </a></td><td>Laryngotracheomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000308<a name=\"hpo-HP.580000308\"> </a></td><td>Microretrognathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002786<a name=\"hpo-HP.580002786\"> </a></td><td>Tracheobronchomalacia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012389<a name=\"hpo-HP.580012389\"> </a></td><td>Appendicular hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011323<a name=\"hpo-HP.580011323\"> </a></td><td>Cleft of chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0000417<a name=\"hpo-HP.580000417\"> </a></td><td>Slender nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0001863<a name=\"hpo-HP.580001863\"> </a></td><td>Toe clinodactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0008386<a name=\"hpo-HP.580008386\"> </a></td><td>Aplasia/Hypoplasia of the nails</td></tr><tr><td style=\"white-space:nowrap\">HP:0006989<a name=\"hpo-HP.580006989\"> </a></td><td>Dysplastic corpus callosum</td></tr><tr><td style=\"white-space:nowrap\">HP:0100954<a name=\"hpo-HP.580100954\"> </a></td><td>Open operculum</td></tr><tr><td style=\"white-space:nowrap\">HP:0004482<a name=\"hpo-HP.580004482\"> </a></td><td>Relative macrocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:3000033<a name=\"hpo-HP.583000033\"> </a></td><td>Abnormal nasopharyngeal adenoid morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0009062<a name=\"hpo-HP.580009062\"> </a></td><td>Infantile axial hypotonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002189<a name=\"hpo-HP.580002189\"> </a></td><td>obsolete Excessive daytime sleepiness</td></tr><tr><td style=\"white-space:nowrap\">HP:0002141<a name=\"hpo-HP.580002141\"> </a></td><td>Gait imbalance</td></tr><tr><td style=\"white-space:nowrap\">HP:0012734<a name=\"hpo-HP.580012734\"> </a></td><td>Ketotic hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005968<a name=\"hpo-HP.580005968\"> </a></td><td>Temperature instability</td></tr><tr><td style=\"white-space:nowrap\">HP:0012538<a name=\"hpo-HP.580012538\"> </a></td><td>Gluten intolerance</td></tr><tr><td style=\"white-space:nowrap\">HP:0000979<a name=\"hpo-HP.580000979\"> </a></td><td>Purpura</td></tr><tr><td style=\"white-space:nowrap\">HP:0001988<a name=\"hpo-HP.580001988\"> </a></td><td>Recurrent hypoglycemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001488<a name=\"hpo-HP.580001488\"> </a></td><td>Bilateral ptosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011229<a name=\"hpo-HP.580011229\"> </a></td><td>Broad eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0004440<a name=\"hpo-HP.580004440\"> </a></td><td>Coronal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0004453<a name=\"hpo-HP.580004453\"> </a></td><td>Overfolding of the superior helices</td></tr><tr><td style=\"white-space:nowrap\">HP:0012547<a name=\"hpo-HP.580012547\"> </a></td><td>Abnormal involuntary eye movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0100814<a name=\"hpo-HP.580100814\"> </a></td><td>Blue nevus</td></tr><tr><td style=\"white-space:nowrap\">HP:0010751<a name=\"hpo-HP.580010751\"> </a></td><td>Dimple chin</td></tr><tr><td style=\"white-space:nowrap\">HP:0007087<a name=\"hpo-HP.580007087\"> </a></td><td>obsolete Involuntary jerking movements</td></tr><tr><td style=\"white-space:nowrap\">HP:0012498<a name=\"hpo-HP.580012498\"> </a></td><td>Nuchal cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0002472<a name=\"hpo-HP.580002472\"> </a></td><td>Small cerebral cortex</td></tr><tr><td style=\"white-space:nowrap\">HP:0100307<a name=\"hpo-HP.580100307\"> </a></td><td>Cerebellar hemisphere hypoplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002151<a name=\"hpo-HP.580002151\"> </a></td><td>Increased serum lactate</td></tr><tr><td style=\"white-space:nowrap\">HP:0001698<a name=\"hpo-HP.580001698\"> </a></td><td>Pericardial effusion</td></tr><tr><td style=\"white-space:nowrap\">HP:0006903<a name=\"hpo-HP.580006903\"> </a></td><td>Congenital peripheral neuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0006895<a name=\"hpo-HP.580006895\"> </a></td><td>Lower limb hypertonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002744<a name=\"hpo-HP.580002744\"> </a></td><td>Bilateral cleft lip and palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0010664<a name=\"hpo-HP.580010664\"> </a></td><td>Fusion of the left and right thalami</td></tr><tr><td style=\"white-space:nowrap\">HP:0000327<a name=\"hpo-HP.580000327\"> </a></td><td>Hypoplasia of the maxilla</td></tr><tr><td style=\"white-space:nowrap\">HP:0000474<a name=\"hpo-HP.580000474\"> </a></td><td>Thickened nuchal skin fold</td></tr><tr><td style=\"white-space:nowrap\">HP:0000105<a name=\"hpo-HP.580000105\"> </a></td><td>Enlarged kidney</td></tr><tr><td style=\"white-space:nowrap\">HP:0000113<a name=\"hpo-HP.580000113\"> </a></td><td>Polycystic kidney dysplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000104<a name=\"hpo-HP.580000104\"> </a></td><td>Renal agenesis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001362<a name=\"hpo-HP.580001362\"> </a></td><td>Calvarial skull defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0008245<a name=\"hpo-HP.580008245\"> </a></td><td>Pituitary hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0001552<a name=\"hpo-HP.580001552\"> </a></td><td>Barrel-shaped chest</td></tr><tr><td style=\"white-space:nowrap\">HP:0006297<a name=\"hpo-HP.580006297\"> </a></td><td>Hypoplasia of dental enamel</td></tr><tr><td style=\"white-space:nowrap\">HP:0100023<a name=\"hpo-HP.580100023\"> </a></td><td>Recurrent hand flapping</td></tr><tr><td style=\"white-space:nowrap\">HP:0005518<a name=\"hpo-HP.580005518\"> </a></td><td>Increased mean corpuscular volume</td></tr><tr><td style=\"white-space:nowrap\">HP:0012418<a name=\"hpo-HP.580012418\"> </a></td><td>Hypoxemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100259<a name=\"hpo-HP.580100259\"> </a></td><td>Postaxial polydactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0010814<a name=\"hpo-HP.580010814\"> </a></td><td>Abnormal position of hair whorl</td></tr><tr><td style=\"white-space:nowrap\">HP:0003764<a name=\"hpo-HP.580003764\"> </a></td><td>Nevus</td></tr><tr><td style=\"white-space:nowrap\">HP:0000445<a name=\"hpo-HP.580000445\"> </a></td><td>Wide nose</td></tr><tr><td style=\"white-space:nowrap\">HP:0010677<a name=\"hpo-HP.580010677\"> </a></td><td>Enuresis nocturna</td></tr><tr><td style=\"white-space:nowrap\">HP:0001510<a name=\"hpo-HP.580001510\"> </a></td><td>Growth delay</td></tr><tr><td style=\"white-space:nowrap\">HP:0012428<a name=\"hpo-HP.580012428\"> </a></td><td>Prominent calcaneus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012471<a name=\"hpo-HP.580012471\"> </a></td><td>Thick vermilion border</td></tr><tr><td style=\"white-space:nowrap\">HP:0007110<a name=\"hpo-HP.580007110\"> </a></td><td>Central hypoventilation</td></tr><tr><td style=\"white-space:nowrap\">HP:0010614<a name=\"hpo-HP.580010614\"> </a></td><td>Fibroma</td></tr><tr><td style=\"white-space:nowrap\">HP:0001034<a name=\"hpo-HP.580001034\"> </a></td><td>Hypermelanotic macule</td></tr><tr><td style=\"white-space:nowrap\">HP:0011365<a name=\"hpo-HP.580011365\"> </a></td><td>Patchy hypopigmentation of hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0001920<a name=\"hpo-HP.580001920\"> </a></td><td>Renal artery stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002828<a name=\"hpo-HP.580002828\"> </a></td><td>Multiple joint contractures</td></tr><tr><td style=\"white-space:nowrap\">HP:0002144<a name=\"hpo-HP.580002144\"> </a></td><td>Tethered cord</td></tr><tr><td style=\"white-space:nowrap\">HP:0010964<a name=\"hpo-HP.580010964\"> </a></td><td>Abnormal circulating long-chain fatty-acid concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0010536<a name=\"hpo-HP.580010536\"> </a></td><td>Central sleep apnea</td></tr><tr><td style=\"white-space:nowrap\">HP:0011262<a name=\"hpo-HP.580011262\"> </a></td><td>Crimped helix</td></tr><tr><td style=\"white-space:nowrap\">HP:0040079<a name=\"hpo-HP.580040079\"> </a></td><td>Irregular dentition</td></tr><tr><td style=\"white-space:nowrap\">HP:0011481<a name=\"hpo-HP.580011481\"> </a></td><td>Abnormal lacrimal duct morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0000220<a name=\"hpo-HP.580000220\"> </a></td><td>Velopharyngeal insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0002153<a name=\"hpo-HP.580002153\"> </a></td><td>Hyperkalemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002148<a name=\"hpo-HP.580002148\"> </a></td><td>Hypophosphatemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012621<a name=\"hpo-HP.580012621\"> </a></td><td>Persistent cloaca</td></tr><tr><td style=\"white-space:nowrap\">HP:0000867<a name=\"hpo-HP.580000867\"> </a></td><td>Secondary hyperparathyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0003762<a name=\"hpo-HP.580003762\"> </a></td><td>Uterus didelphys</td></tr><tr><td style=\"white-space:nowrap\">HP:0100512<a name=\"hpo-HP.580100512\"> </a></td><td>Low levels of vitamin D</td></tr><tr><td style=\"white-space:nowrap\">HP:0012156<a name=\"hpo-HP.580012156\"> </a></td><td>Hemophagocytosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008209<a name=\"hpo-HP.580008209\"> </a></td><td>Premature ovarian insufficiency</td></tr><tr><td style=\"white-space:nowrap\">HP:0004349<a name=\"hpo-HP.580004349\"> </a></td><td>Reduced bone mineral density</td></tr><tr><td style=\"white-space:nowrap\">HP:0001924<a name=\"hpo-HP.580001924\"> </a></td><td>Sideroblastic anemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011703<a name=\"hpo-HP.580011703\"> </a></td><td>Sinus tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010609<a name=\"hpo-HP.580010609\"> </a></td><td>Skin tags</td></tr><tr><td style=\"white-space:nowrap\">HP:0002725<a name=\"hpo-HP.580002725\"> </a></td><td>Systemic lupus erythematosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0003193<a name=\"hpo-HP.580003193\"> </a></td><td>Allergic rhinitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006896<a name=\"hpo-HP.580006896\"> </a></td><td>Hypnopompic hallucinations</td></tr><tr><td style=\"white-space:nowrap\">HP:0002524<a name=\"hpo-HP.580002524\"> </a></td><td>Cataplexy</td></tr><tr><td style=\"white-space:nowrap\">HP:0005227<a name=\"hpo-HP.580005227\"> </a></td><td>Adenomatous colonic polyposis</td></tr><tr><td style=\"white-space:nowrap\">HP:0012173<a name=\"hpo-HP.580012173\"> </a></td><td>Orthostatic tachycardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0001271<a name=\"hpo-HP.580001271\"> </a></td><td>Polyneuropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0009120<a name=\"hpo-HP.580009120\"> </a></td><td>Aplasia/Hypoplasia involving the sinuses</td></tr><tr><td style=\"white-space:nowrap\">HP:0000625<a name=\"hpo-HP.580000625\"> </a></td><td>Eyelid coloboma</td></tr><tr><td style=\"white-space:nowrap\">HP:0009754<a name=\"hpo-HP.580009754\"> </a></td><td>Fibrous syngnathia</td></tr><tr><td style=\"white-space:nowrap\">HP:0012478<a name=\"hpo-HP.580012478\"> </a></td><td>Temporomandibular joint ankylosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001233<a name=\"hpo-HP.580001233\"> </a></td><td>2-3 finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0000811<a name=\"hpo-HP.580000811\"> </a></td><td>Abnormal external genitalia</td></tr><tr><td style=\"white-space:nowrap\">HP:0005120<a name=\"hpo-HP.580005120\"> </a></td><td>Abnormal cardiac atrium morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0008388<a name=\"hpo-HP.580008388\"> </a></td><td>Abnormal toenail morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0011467<a name=\"hpo-HP.580011467\"> </a></td><td>Absent gallbladder</td></tr><tr><td style=\"white-space:nowrap\">HP:0010760<a name=\"hpo-HP.580010760\"> </a></td><td>Absent toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0001545<a name=\"hpo-HP.580001545\"> </a></td><td>Anteriorly placed anus</td></tr><tr><td style=\"white-space:nowrap\">HP:0001640<a name=\"hpo-HP.580001640\"> </a></td><td>Cardiomegaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0002990<a name=\"hpo-HP.580002990\"> </a></td><td>Fibular aplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0004443<a name=\"hpo-HP.580004443\"> </a></td><td>Lambdoidal craniosynostosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0008569<a name=\"hpo-HP.580008569\"> </a></td><td>Microtia, second degree</td></tr><tr><td style=\"white-space:nowrap\">HP:0006277<a name=\"hpo-HP.580006277\"> </a></td><td>Pancreatic hyperplasia</td></tr><tr><td style=\"white-space:nowrap\">HP:0010445<a name=\"hpo-HP.580010445\"> </a></td><td>Primum atrial septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0011640<a name=\"hpo-HP.580011640\"> </a></td><td>Single coronary artery origin</td></tr><tr><td style=\"white-space:nowrap\">HP:0011608<a name=\"hpo-HP.580011608\"> </a></td><td>Type II truncus arteriosus</td></tr><tr><td style=\"white-space:nowrap\">HP:0011327<a name=\"hpo-HP.580011327\"> </a></td><td>Posterior plagiocephaly</td></tr><tr><td style=\"white-space:nowrap\">HP:0007655<a name=\"hpo-HP.580007655\"> </a></td><td>Eversion of lateral third of lower eyelids</td></tr><tr><td style=\"white-space:nowrap\">HP:0010747<a name=\"hpo-HP.580010747\"> </a></td><td>Medial flaring of the eyebrow</td></tr><tr><td style=\"white-space:nowrap\">HP:0005957<a name=\"hpo-HP.580005957\"> </a></td><td>Breathing dysregulation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000992<a name=\"hpo-HP.580000992\"> </a></td><td>Cutaneous photosensitivity</td></tr><tr><td style=\"white-space:nowrap\">HP:0011995<a name=\"hpo-HP.580011995\"> </a></td><td>Atrial septal dilatation</td></tr><tr><td style=\"white-space:nowrap\">HP:0000377<a name=\"hpo-HP.580000377\"> </a></td><td>Abnormality of the pinna</td></tr><tr><td style=\"white-space:nowrap\">HP:0011266<a name=\"hpo-HP.580011266\"> </a></td><td>Microtia, first degree</td></tr><tr><td style=\"white-space:nowrap\">HP:0012650<a name=\"hpo-HP.580012650\"> </a></td><td>Perisylvian polymicrogyria</td></tr><tr><td style=\"white-space:nowrap\">HP:0004970<a name=\"hpo-HP.580004970\"> </a></td><td>Ascending tubular aorta aneurysm</td></tr><tr><td style=\"white-space:nowrap\">HP:0008348<a name=\"hpo-HP.580008348\"> </a></td><td>Decreased circulating IgG2 level</td></tr><tr><td style=\"white-space:nowrap\">HP:0012115<a name=\"hpo-HP.580012115\"> </a></td><td>Hepatitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006979<a name=\"hpo-HP.580006979\"> </a></td><td>Sleep-wake cycle disturbance</td></tr><tr><td style=\"white-space:nowrap\">HP:0008587<a name=\"hpo-HP.580008587\"> </a></td><td>Mild neurosensory hearing impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0006097<a name=\"hpo-HP.580006097\"> </a></td><td>3-4 finger syndactyly</td></tr><tr><td style=\"white-space:nowrap\">HP:0005263<a name=\"hpo-HP.580005263\"> </a></td><td>Gastritis</td></tr><tr><td style=\"white-space:nowrap\">HP:0200043<a name=\"hpo-HP.580200043\"> </a></td><td>Verrucae</td></tr><tr><td style=\"white-space:nowrap\">HP:0009600<a name=\"hpo-HP.580009600\"> </a></td><td>Flexion contracture of thumb</td></tr><tr><td style=\"white-space:nowrap\">HP:0010818<a name=\"hpo-HP.580010818\"> </a></td><td>Generalized tonic seizure</td></tr><tr><td style=\"white-space:nowrap\">HP:0002599<a name=\"hpo-HP.580002599\"> </a></td><td>Head titubation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002090<a name=\"hpo-HP.580002090\"> </a></td><td>Pneumonia</td></tr><tr><td style=\"white-space:nowrap\">HP:0030423<a name=\"hpo-HP.580030423\"> </a></td><td>Splenic cyst</td></tr><tr><td style=\"white-space:nowrap\">HP:0030187<a name=\"hpo-HP.580030187\"> </a></td><td>Titubation</td></tr><tr><td style=\"white-space:nowrap\">HP:0002375<a name=\"hpo-HP.580002375\"> </a></td><td>Hypokinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0007166<a name=\"hpo-HP.580007166\"> </a></td><td>Paroxysmal dyskinesia</td></tr><tr><td style=\"white-space:nowrap\">HP:0003077<a name=\"hpo-HP.580003077\"> </a></td><td>Hyperlipidemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0000017<a name=\"hpo-HP.580000017\"> </a></td><td>Nocturia</td></tr><tr><td style=\"white-space:nowrap\">HP:0100555<a name=\"hpo-HP.580100555\"> </a></td><td>Asymmetric growth</td></tr><tr><td style=\"white-space:nowrap\">HP:0011847<a name=\"hpo-HP.580011847\"> </a></td><td>Giant cell tumor of bone</td></tr><tr><td style=\"white-space:nowrap\">HP:0000112<a name=\"hpo-HP.580000112\"> </a></td><td>Nephropathy</td></tr><tr><td style=\"white-space:nowrap\">HP:0000246<a name=\"hpo-HP.580000246\"> </a></td><td>Sinusitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001012<a name=\"hpo-HP.580001012\"> </a></td><td>Multiple lipomas</td></tr><tr><td style=\"white-space:nowrap\">HP:0000851<a name=\"hpo-HP.580000851\"> </a></td><td>Congenital hypothyroidism</td></tr><tr><td style=\"white-space:nowrap\">HP:0002345<a name=\"hpo-HP.580002345\"> </a></td><td>Action tremor</td></tr><tr><td style=\"white-space:nowrap\">HP:0002677<a name=\"hpo-HP.580002677\"> </a></td><td>Small foramen magnum</td></tr><tr><td style=\"white-space:nowrap\">HP:0011947<a name=\"hpo-HP.580011947\"> </a></td><td>Respiratory tract infection</td></tr><tr><td style=\"white-space:nowrap\">HP:0012151<a name=\"hpo-HP.580012151\"> </a></td><td>Hemothorax</td></tr><tr><td style=\"white-space:nowrap\">HP:0005988<a name=\"hpo-HP.580005988\"> </a></td><td>Congenital muscular torticollis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002329<a name=\"hpo-HP.580002329\"> </a></td><td>Drowsiness</td></tr><tr><td style=\"white-space:nowrap\">HP:0012395<a name=\"hpo-HP.580012395\"> </a></td><td>Seasonal allergy</td></tr><tr><td style=\"white-space:nowrap\">HP:0011679<a name=\"hpo-HP.580011679\"> </a></td><td>Tetralogy of Fallot with pulmonary stenosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0001864<a name=\"hpo-HP.580001864\"> </a></td><td>Clinodactyly of the 5th toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0006934<a name=\"hpo-HP.580006934\"> </a></td><td>Congenital nystagmus</td></tr><tr><td style=\"white-space:nowrap\">HP:0100355<a name=\"hpo-HP.580100355\"> </a></td><td>Contractures of the distal interphalangeal joint of the 5th toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0007894<a name=\"hpo-HP.580007894\"> </a></td><td>Hypopigmentation of the fundus</td></tr><tr><td style=\"white-space:nowrap\">HP:0012377<a name=\"hpo-HP.580012377\"> </a></td><td>Hemianopia</td></tr><tr><td style=\"white-space:nowrap\">HP:0002354<a name=\"hpo-HP.580002354\"> </a></td><td>Memory impairment</td></tr><tr><td style=\"white-space:nowrap\">HP:0000872<a name=\"hpo-HP.580000872\"> </a></td><td>Hashimoto thyroiditis</td></tr><tr><td style=\"white-space:nowrap\">HP:0002519<a name=\"hpo-HP.580002519\"> </a></td><td>Hypnagogic hallucinations</td></tr><tr><td style=\"white-space:nowrap\">HP:0010647<a name=\"hpo-HP.580010647\"> </a></td><td>Abnormal elasticity of skin</td></tr><tr><td style=\"white-space:nowrap\">HP:0002592<a name=\"hpo-HP.580002592\"> </a></td><td>Gastric ulcer</td></tr><tr><td style=\"white-space:nowrap\">HP:0004938<a name=\"hpo-HP.580004938\"> </a></td><td>Tortuous cerebral arteries</td></tr><tr><td style=\"white-space:nowrap\">HP:0004948<a name=\"hpo-HP.580004948\"> </a></td><td>Vascular tortuosity</td></tr><tr><td style=\"white-space:nowrap\">HP:0002516<a name=\"hpo-HP.580002516\"> </a></td><td>Increased intracranial pressure</td></tr><tr><td style=\"white-space:nowrap\">HP:0006460<a name=\"hpo-HP.580006460\"> </a></td><td>Increased laxity of ankles</td></tr><tr><td style=\"white-space:nowrap\">HP:0002317<a name=\"hpo-HP.580002317\"> </a></td><td>Unsteady gait</td></tr><tr><td style=\"white-space:nowrap\">HP:0000182<a name=\"hpo-HP.580000182\"> </a></td><td>Movement abnormality of the tongue</td></tr><tr><td style=\"white-space:nowrap\">HP:0009887<a name=\"hpo-HP.580009887\"> </a></td><td>Abnormality of hair pigmentation</td></tr><tr><td style=\"white-space:nowrap\">HP:0005824<a name=\"hpo-HP.580005824\"> </a></td><td>Clinodactyly of the 2nd toe</td></tr><tr><td style=\"white-space:nowrap\">HP:0002212<a name=\"hpo-HP.580002212\"> </a></td><td>Curly hair</td></tr><tr><td style=\"white-space:nowrap\">HP:0009803<a name=\"hpo-HP.580009803\"> </a></td><td>Short phalanx of finger</td></tr><tr><td style=\"white-space:nowrap\">HP:0000572<a name=\"hpo-HP.580000572\"> </a></td><td>Visual loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0005216<a name=\"hpo-HP.580005216\"> </a></td><td>Impaired mastication</td></tr><tr><td style=\"white-space:nowrap\">HP:0000619<a name=\"hpo-HP.580000619\"> </a></td><td>Impaired convergence</td></tr><tr><td style=\"white-space:nowrap\">HP:0002403<a name=\"hpo-HP.580002403\"> </a></td><td>Positive Romberg sign</td></tr><tr><td style=\"white-space:nowrap\">HP:0008744<a name=\"hpo-HP.580008744\"> </a></td><td>Abnormal aryepiglottic fold morphology</td></tr><tr><td style=\"white-space:nowrap\">HP:0002374<a name=\"hpo-HP.580002374\"> </a></td><td>Diminished movement</td></tr><tr><td style=\"white-space:nowrap\">HP:0008277<a name=\"hpo-HP.580008277\"> </a></td><td>Abnormal blood zinc concentration</td></tr><tr><td style=\"white-space:nowrap\">HP:0012781<a name=\"hpo-HP.580012781\"> </a></td><td>Mid-frequency hearing loss</td></tr><tr><td style=\"white-space:nowrap\">HP:0100758<a name=\"hpo-HP.580100758\"> </a></td><td>Gangrene</td></tr><tr><td style=\"white-space:nowrap\">HP:0003256<a name=\"hpo-HP.580003256\"> </a></td><td>Abnormality of the coagulation cascade</td></tr><tr><td style=\"white-space:nowrap\">HP:0004387<a name=\"hpo-HP.580004387\"> </a></td><td>Enterocolitis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011029<a name=\"hpo-HP.580011029\"> </a></td><td>Internal hemorrhage</td></tr><tr><td style=\"white-space:nowrap\">HP:0011649<a name=\"hpo-HP.580011649\"> </a></td><td>Patent ductus arteriosus after premature birth</td></tr><tr><td style=\"white-space:nowrap\">HP:0012050<a name=\"hpo-HP.580012050\"> </a></td><td>Anasarca</td></tr><tr><td style=\"white-space:nowrap\">HP:0001683<a name=\"hpo-HP.580001683\"> </a></td><td>Ectopia cordis</td></tr><tr><td style=\"white-space:nowrap\">HP:0011682<a name=\"hpo-HP.580011682\"> </a></td><td>Perimembranous ventricular septal defect</td></tr><tr><td style=\"white-space:nowrap\">HP:0010624<a name=\"hpo-HP.580010624\"> </a></td><td>Aplastic/hypoplastic toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0002705<a name=\"hpo-HP.580002705\"> </a></td><td>High, narrow palate</td></tr><tr><td style=\"white-space:nowrap\">HP:0011340<a name=\"hpo-HP.580011340\"> </a></td><td>Incomplete cleft of the upper lip</td></tr><tr><td style=\"white-space:nowrap\">HP:0011613<a name=\"hpo-HP.580011613\"> </a></td><td>Interrupted aortic arch type B</td></tr><tr><td style=\"white-space:nowrap\">HP:0006167<a name=\"hpo-HP.580006167\"> </a></td><td>Prominent proximal interphalangeal joints</td></tr><tr><td style=\"white-space:nowrap\">HP:0002918<a name=\"hpo-HP.580002918\"> </a></td><td>Hypermagnesemia</td></tr><tr><td style=\"white-space:nowrap\">HP:0011937<a name=\"hpo-HP.580011937\"> </a></td><td>Hypoplastic fifth toenail</td></tr><tr><td style=\"white-space:nowrap\">HP:0001067<a name=\"hpo-HP.580001067\"> </a></td><td>Neurofibromas</td></tr><tr><td style=\"white-space:nowrap\">HP:0011403<a name=\"hpo-HP.580011403\"> </a></td><td>Abnormal umbilical cord blood vessels</td></tr><tr><td style=\"white-space:nowrap\">HP:0003316<a name=\"hpo-HP.580003316\"> </a></td><td>Butterfly vertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0002247<a name=\"hpo-HP.580002247\"> </a></td><td>Duodenal atresia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008439<a name=\"hpo-HP.580008439\"> </a></td><td>Lumbar hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0011599<a name=\"hpo-HP.580011599\"> </a></td><td>Mesocardia</td></tr><tr><td style=\"white-space:nowrap\">HP:0008467<a name=\"hpo-HP.580008467\"> </a></td><td>Thoracic hemivertebrae</td></tr><tr><td style=\"white-space:nowrap\">HP:0004626<a name=\"hpo-HP.580004626\"> </a></td><td>Lumbar scoliosis</td></tr><tr><td style=\"white-space:nowrap\">HP:0006808<a name=\"hpo-HP.580006808\"> </a></td><td>Cerebral hypomyelination</td></tr><tr><td style=\"white-space:nowrap\">HP:0002926<a name=\"hpo-HP.580002926\"> </a></td><td>Abnormality of thyroid physiology</td></tr><tr><td style=\"white-space:nowrap\">HP:0007970<a name=\"hpo-HP.580007970\"> </a></td><td>Congenital ptosis</td></tr></table></div>"},"url":"http://purl.obolibrary.org/obo/hp.owl","version":"0.2.0","name":"HPO","title":"Human Phenotype Ontology","status":"draft","experimental":false,"date":"2022-12-09T17:30:30+00:00","publisher":"NCPI FHIR Working Group","contact":[{"name":"NCPI FHIR Working Group","telecom":[{"system":"url","value":"https://github.com/nih-ncpi"}]},{"name":"Meen Chul Kim","telecom":[{"system":"email","value":"meenchul@d3b.center","use":"work"}]}],"description":"The Human Phenotype Ontology (HPO) provides a standardized vocabulary of phenotypic abnormalities encountered in human disease. Please see license of HPO at http://www.human-phenotype-ontology.org","valueSet":"http://fhir.ncpi-project-forge.io/ValueSet/phenotype-codes","hierarchyMeaning":"is-a","compositional":false,"versionNeeded":false,"content":"fragment","count":1880,"filter":[{"code":"root","operator":["="],"value":"True or false."},{"code":"deprecated","operator":["="],"value":"True or false."},{"code":"imported","operator":["="],"value":"True or false"}],"property":[{"code":"parent","description":"Parent codes.","type":"code"},{"code":"imported","description":"Indicates if the concept is imported from another code system.","type":"boolean"},{"code":"root","description":"Indicates if this concept is a root concept (i.e. Thing is equivalent or a direct parent)","type":"boolean"},{"code":"deprecated","description":"Indicates if this concept is deprecated.","type":"boolean"}],"concept":[{"code":"HP:0000365","display":"Hearing impairment"},{"code":"HP:0002564","display":"obsolete Malformation of the heart and great vessels"},{"code":"HP:0001028","display":"Hemangioma"},{"code":"HP:0000476","display":"Cystic hygroma"},{"code":"HP:0000568","display":"Microphthalmia"},{"code":"HP:0000518","display":"Cataract"},{"code":"HP:0000612","display":"Iris coloboma"},{"code":"HP:0000567","display":"Chorioretinal coloboma"},{"code":"HP:0000316","display":"Hypertelorism"},{"code":"HP:0000482","display":"Microcornea"},{"code":"HP:0000588","display":"Optic nerve coloboma"},{"code":"HP:0004426","display":"Abnormality of the cheek"},{"code":"HP:0009125","display":"Lipodystrophy"},{"code":"HP:0002023","display":"Anal atresia"},{"code":"HP:0003468","display":"Abnormal vertebral morphology"},{"code":"HP:0000545","display":"Myopia"},{"code":"HP:0000122","display":"Unilateral renal agenesis"},{"code":"HP:0002143","display":"Abnormality of the spinal cord"},{"code":"HP:0003508","display":"Proportionate short stature"},{"code":"HP:0000271","display":"Abnormality of the face"},{"code":"HP:0000637","display":"Long palpebral fissure"},{"code":"HP:0000492","display":"Abnormal eyelid morphology"},{"code":"HP:0000389","display":"Chronic otitis media"},{"code":"HP:0000400","display":"Macrotia"},{"code":"HP:0000405","display":"Conductive hearing impairment"},{"code":"HP:0012712","display":"Mild hearing impairment"},{"code":"HP:0005280","display":"Depressed nasal bridge"},{"code":"HP:0000431","display":"Wide nasal bridge"},{"code":"HP:0000319","display":"Smooth philtrum"},{"code":"HP:0000175","display":"Cleft palate"},{"code":"HP:0001611","display":"Nasal speech"},{"code":"HP:0002099","display":"Asthma"},{"code":"HP:0001397","display":"Hepatic steatosis"},{"code":"HP:0001081","display":"Cholelithiasis"},{"code":"HP:0002650","display":"Scoliosis"},{"code":"HP:0001212","display":"Prominent fingertip pads"},{"code":"HP:0001328","display":"Specific learning disability"},{"code":"HP:0000824","display":"Growth hormone deficiency"},{"code":"HP:0002607","display":"Bowel incontinence"},{"code":"HP:0100731","display":"Transverse facial cleft"},{"code":"HP:0000528","display":"Anophthalmia"},{"code":"HP:0000601","display":"Hypotelorism"},{"code":"HP:0000369","display":"Low-set ears"},{"code":"HP:0001274","display":"Agenesis of corpus callosum"},{"code":"HP:0002084","display":"Encephalocele"},{"code":"HP:0007033","display":"Cerebellar dysplasia"},{"code":"HP:0100336","display":"Bilateral cleft lip"},{"code":"HP:0100337","display":"Bilateral cleft palate"},{"code":"HP:0001511","display":"Intrauterine growth retardation"},{"code":"HP:0011451","display":"Congenital microcephaly"},{"code":"HP:0000324","display":"Facial asymmetry"},{"code":"HP:0000581","display":"Blepharophimosis"},{"code":"HP:0000508","display":"Ptosis"},{"code":"HP:0008551","display":"Microtia"},{"code":"HP:0001631","display":"Atrial septal defect"},{"code":"HP:0000085","display":"Horseshoe kidney"},{"code":"HP:0011927","display":"Short digit"},{"code":"HP:0001156","display":"Brachydactyly"},{"code":"HP:0002066","display":"Gait ataxia"},{"code":"HP:0001250","display":"Seizure"},{"code":"HP:0001263","display":"Global developmental delay"},{"code":"HP:0001562","display":"Oligohydramnios"},{"code":"HP:0001195","display":"Single umbilical artery"},{"code":"HP:0006349","display":"Agenesis of permanent teeth"},{"code":"HP:0000668","display":"Hypodontia"},{"code":"HP:0000677","display":"Oligodontia"},{"code":"HP:0001252","display":"Muscular hypotonia"},{"code":"HP:0003429","display":"CNS hypomyelination"},{"code":"HP:0010864","display":"Intellectual disability, severe"},{"code":"HP:0004325","display":"Decreased body weight"},{"code":"HP:0000666","display":"Horizontal nystagmus"},{"code":"HP:0000218","display":"High palate"},{"code":"HP:0010809","display":"Broad uvula"},{"code":"HP:0000767","display":"Pectus excavatum"},{"code":"HP:0003691","display":"Scapular winging"},{"code":"HP:0002616","display":"Aortic root aneurysm"},{"code":"HP:0001601","display":"Laryngomalacia"},{"code":"HP:0002021","display":"Pyloric stenosis"},{"code":"HP:0001388","display":"Joint laxity"},{"code":"HP:0001187","display":"Hyperextensibility of the finger joints"},{"code":"HP:0000741","display":"Apathy"},{"code":"HP:0000817","display":"Poor eye contact"},{"code":"HP:0000821","display":"Hypothyroidism"},{"code":"HP:0000002","display":"Abnormality of body height"},{"code":"HP:0000079","display":"Abnormality of the urinary system"},{"code":"HP:0000164","display":"Abnormality of the dentition"},{"code":"HP:0000364","display":"Hearing abnormality"},{"code":"HP:0000366","display":"Abnormality of the nose"},{"code":"HP:0000464","display":"Abnormality of the neck"},{"code":"HP:0000707","display":"Abnormality of the nervous system"},{"code":"HP:0000708","display":"Behavioral abnormality"},{"code":"HP:0000769","display":"Abnormality of the breast"},{"code":"HP:0000772","display":"Abnormality of the ribs"},{"code":"HP:0000775","display":"Abnormality of the diaphragm"},{"code":"HP:0000889","display":"Abnormality of the clavicle"},{"code":"HP:0000925","display":"Abnormality of the vertebral column"},{"code":"HP:0001080","display":"Biliary tract abnormality"},{"code":"HP:0001392","display":"Abnormality of the liver"},{"code":"HP:0001438","display":"Abnormal abdomen morphology"},{"code":"HP:0001608","display":"Abnormality of the voice"},{"code":"HP:0001627","display":"Abnormal heart morphology"},{"code":"HP:0001732","display":"Abnormality of the pancreas"},{"code":"HP:0001739","display":"Abnormality of the nasopharynx"},{"code":"HP:0001743","display":"Abnormality of the spleen"},{"code":"HP:0001760","display":"Abnormal foot morphology"},{"code":"HP:0001871","display":"Abnormality of blood and blood-forming tissues"},{"code":"HP:0002031","display":"Abnormal esophagus morphology"},{"code":"HP:0002244","display":"Abnormality of the small intestine"},{"code":"HP:0002246","display":"Abnormality of the duodenum"},{"code":"HP:0002250","display":"Abnormal large intestine morphology"},{"code":"HP:0002644","display":"Abnormality of pelvic girdle bone morphology"},{"code":"HP:0002664","display":"Neoplasm"},{"code":"HP:0002715","display":"Abnormality of the immune system"},{"code":"HP:0002814","display":"Abnormality of the lower limb"},{"code":"HP:0002817","display":"Abnormality of the upper limb"},{"code":"HP:0005483","display":"Abnormal epiglottis morphology"},{"code":"HP:0008777","display":"Abnormal vocal cord morphology"},{"code":"HP:0011844","display":"Abnormal appendicular skeleton morphology"},{"code":"HP:0012732","display":"Anorectal anomaly"},{"code":"HP:0001508","display":"Failure to thrive"},{"code":"HP:0002902","display":"Hyponatremia"},{"code":"HP:0012236","display":"Elevated sweat 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Ontology","status":"draft","experimental":false,"date":"2022-12-09T17:30:30+00:00","publisher":"NCPI FHIR Working Group","contact":[{"name":"NCPI FHIR Working Group","telecom":[{"system":"url","value":"https://github.com/nih-ncpi"}]},{"name":"Meen Chul Kim","telecom":[{"system":"email","value":"meenchul@d3b.center","use":"work"}]}],"description":"The Mondo Disease Ontology (Mondo) aims to harmonize disease definitions across the world. The name Mondo comes from the latin word 'mundus' and means 'for the world.'","caseSensitive":true,"content":"fragment","count":3,"concept":[{"code":"MONDO:0005072","display":"neuroblastoma"},{"code":"MONDO:0002749","display":"extracranial neuroblastoma"},{"code":"MONDO:0008542","display":"tetralogy of fallot"}]}},{"name":"valueSet","resource":{"resourceType":"ValueSet","id":"datatable-mappings-valueset-1","text":{"status":"generated","div":"<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This value set includes codes based on the following rules:</p><ul><li>Include these codes as defined in <code>https://uts.nlm.nih.gov/uts/umls</code><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C2348584</td><td>Subject Unique Identifier</td></tr><tr><td>C0079399</td><td>Gender</td></tr><tr><td>C168843</td><td>Age in Days at Enrollment</td></tr><tr><td>C1305855</td><td>Body mass index</td></tr><tr><td>C0872128</td><td>case control</td></tr></table></li><li>Include these codes as defined in <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"https://loinc.org/LP35925-4/\">LP35925-4</a></td><td>Body mass index (BMI)</td></tr></table></li><li>Include these codes as defined in <a href=\"CodeSystem-hpo.html\"><code>http://purl.obolibrary.org/obo/hp.owl</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"CodeSystem-hpo.html#hpo-HP.580010772\">HP:0010772</a></td><td>Anomalous pulmonary venous return</td></tr></table></li><li>Include these codes as defined in <a href=\"CodeSystem-mondo.html\"><code>http://purl.obolibrary.org/obo/mondo.owl</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"CodeSystem-mondo.html#mondo-0017705\">0017705</a></td><td>congenital pulmonary venous return anomaly</td></tr><tr><td><a href=\"CodeSystem-mondo.html#mondo-0007130\">0007130</a></td><td>congenital total pulmonary venous return anomaly</td></tr></table></li></ul></div>"},"url":"https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1","version":"0.2.0","name":"ExampleStudyTableMappingsVS1","title":"Harmonized ValueSet for data table","status":"active","date":"2022-12-09T17:30:30+00:00","publisher":"NCPI FHIR Working Group","contact":[{"name":"NCPI FHIR Working Group","telecom":[{"system":"url","value":"https://github.com/nih-ncpi"}]},{"name":"Meen Chul Kim","telecom":[{"system":"email","value":"meenchul@d3b.center","use":"work"}]}],"description":"Public codes mapped from example dataset\n\nThe codes used below were chosen purely for example's sake and are in no way an endorsement or suggestion for terms that should be used in a real data-dictionary.","compose":{"include":[{"system":"https://uts.nlm.nih.gov/uts/umls","concept":[{"code":"C2348584","display":"Subject Unique Identifier"},{"code":"C0079399","display":"Gender"},{"code":"C168843","display":"Age in Days at Enrollment"},{"code":"C1305855","display":"Body mass index"},{"code":"C0872128","display":"case control"}]},{"system":"http://loinc.org","concept":[{"code":"LP35925-4","display":"Body mass index (BMI)"}]},{"system":"http://purl.obolibrary.org/obo/hp.owl","concept":[{"code":"HP:0010772","display":"Anomalous pulmonary venous return"}]},{"system":"http://purl.obolibrary.org/obo/mondo.owl","concept":[{"code":"0017705","display":"congenital pulmonary venous return anomaly"},{"code":"0007130","display":"congenital total pulmonary venous return anomaly"}]}]}}},{"name":"_limit","valueString":"1000"},{"name":"_incomplete","valueString":"true"}]} </pre> <pre> 422 @@ -1402,9 +1399,9 @@ connection:keep-alive content-length:3656 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:50 GMT +date:Fri, 09 Dec 2022 17:31:29 GMT server:nginx -x-request-id:57-438727 +x-request-id:60-1125559 {"resourceType" : "OperationOutcome","text" : {"status" : "generated","div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls</p></div>"},"issue" : [{"severity" : "error","code" : "not-supported","details" : {"text" : "Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls"},"diagnostics" : "(0000000000ECECED){FHIRServer.exe} [00000000012CFCED] Unknown function at TMethodImplementationIntercept + $E289ED\r\n(000000000033D7AC){FHIRServer.exe} [000000000073E7AC] Unknown function at TMethodImplementationIntercept + $2974AC\r\n(000000000033F46E){FHIRServer.exe} [000000000074046E] Unknown function at TMethodImplementationIntercept + $29916E\r\n(000000000004B6F7){FHIRServer.exe} [000000000044C6F7] Unknown function at __dbk_fcall_wrapper + $2E2F7\r\n(000000000004BFEB){FHIRServer.exe} [000000000044CFEB] Unknown function at __dbk_fcall_wrapper + $2EBEB\r\n(0000000000011276){FHIRServer.exe} [0000000000412276]\r\n(00000000000112B1){FHIRServer.exe} [00000000004122B1]\r\n(0000000000ECECED){FHIRServer.exe} [00000000012CFCED] Unknown function at TMethodImplementationIntercept + $E289ED\r\n(0000000000EDAEDE){FHIRServer.exe} [00000000012DBEDE] Unknown function at TMethodImplementationIntercept + $E34BDE\r\n(0000000000ED861B){FHIRServer.exe} [00000000012D961B] Unknown function at TMethodImplementationIntercept + $E3231B\r\n(0000000000ED72AF){FHIRServer.exe} [00000000012D82AF] Unknown function at TMethodImplementationIntercept + $E30FAF\r\n(000000000109CE14){FHIRServer.exe} [000000000149DE14] Unknown function at TMethodImplementationIntercept + $FF6B14\r\n(000000000109C5C4){FHIRServer.exe} [000000000149D5C4] Unknown function at TMethodImplementationIntercept + $FF62C4\r\n(00000000013DCA77){FHIRServer.exe} [00000000017DDA77] Unknown function at TMethodImplementationIntercept + $1336777\r\n(00000000011587F2){FHIRServer.exe} [00000000015597F2] Unknown function at TMethodImplementationIntercept + $10B24F2\r\n(0000000001150BC7){FHIRServer.exe} [0000000001551BC7] Unknown function at TMethodImplementationIntercept + $10AA8C7\r\n(00000000023509CA){FHIRServer.exe} [00000000027519CA] Unknown function at TMethodImplementationIntercept + $22AA6CA\r\n(000000000234D561){FHIRServer.exe} [000000000274E561] Unknown function at TMethodImplementationIntercept + $22A7261\r\n(0000000002348313){FHIRServer.exe} [0000000002749313] Unknown function at TMethodImplementationIntercept + $22A2013\r\n(0000000006CAD3CF){FHIRServer.exe} [00000000070AE3CF] Unknown function at TMethodImplementationIntercept + $6C070CF\r\n(000000000025CA0C){FHIRServer.exe} [000000000065DA0C] Unknown function at TMethodImplementationIntercept + $1B670C\r\n(000000000025E666){FHIRServer.exe} [000000000065F666] Unknown function at TMethodImplementationIntercept + $1B8366\r\n(000000000023789E){FHIRServer.exe} [000000000063889E] Unknown function at TMethodImplementationIntercept + $19159E\r\n(0000000000235961){FHIRServer.exe} [0000000000636961] Unknown function at TMethodImplementationIntercept + $18F661\r\n(000000000023CE94){FHIRServer.exe} [000000000063DE94] Unknown function at TMethodImplementationIntercept + $196B94\r\n(000000000023BDBD){FHIRServer.exe} [000000000063CDBD] Unknown function at TMethodImplementationIntercept + $195ABD\r\n(0000000000138173){FHIRServer.exe} [0000000000539173] Unknown function at TMethodImplementationIntercept + $91E73\r\n(0000000000011E3D){FHIRServer.exe} [0000000000412E3D]\r\n(00000000000003D2){KERNEL32.DLL} [00007FFDEFEA13D2] BaseThreadInitThunk + $22\r\n(0000000000014504){ntdll.dll } [00007FFDF0F85504] RtlUserThreadStart + $34\r\n"}]} </pre> @@ -1427,9 +1424,9 @@ connection:keep-alive content-length:3656 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:52 GMT +date:Fri, 09 Dec 2022 17:31:31 GMT server:nginx -x-request-id:57-438732 +x-request-id:60-1125566 {"resourceType" : "OperationOutcome","text" : {"status" : "generated","div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls</p></div>"},"issue" : [{"severity" : "error","code" : "not-supported","details" : {"text" : "Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls"},"diagnostics" : "(0000000000ECECED){FHIRServer.exe} [00000000012CFCED] Unknown function at TMethodImplementationIntercept + $E289ED\r\n(000000000033D7AC){FHIRServer.exe} [000000000073E7AC] Unknown function at TMethodImplementationIntercept + $2974AC\r\n(000000000033F46E){FHIRServer.exe} [000000000074046E] Unknown function at TMethodImplementationIntercept + $29916E\r\n(000000000004B6F7){FHIRServer.exe} [000000000044C6F7] Unknown function at __dbk_fcall_wrapper + $2E2F7\r\n(000000000004BFEB){FHIRServer.exe} [000000000044CFEB] Unknown function at __dbk_fcall_wrapper + $2EBEB\r\n(0000000000011276){FHIRServer.exe} [0000000000412276]\r\n(00000000000112B1){FHIRServer.exe} [00000000004122B1]\r\n(0000000000ECECED){FHIRServer.exe} [00000000012CFCED] Unknown function at TMethodImplementationIntercept + $E289ED\r\n(0000000000EDAEDE){FHIRServer.exe} [00000000012DBEDE] Unknown function at TMethodImplementationIntercept + $E34BDE\r\n(0000000000ED861B){FHIRServer.exe} [00000000012D961B] Unknown function at TMethodImplementationIntercept + $E3231B\r\n(0000000000ED72AF){FHIRServer.exe} [00000000012D82AF] Unknown function at TMethodImplementationIntercept + $E30FAF\r\n(000000000109CE14){FHIRServer.exe} [000000000149DE14] Unknown function at TMethodImplementationIntercept + $FF6B14\r\n(000000000109C5C4){FHIRServer.exe} [000000000149D5C4] Unknown function at TMethodImplementationIntercept + $FF62C4\r\n(00000000013DCA77){FHIRServer.exe} [00000000017DDA77] Unknown function at TMethodImplementationIntercept + $1336777\r\n(00000000011587F2){FHIRServer.exe} [00000000015597F2] Unknown function at TMethodImplementationIntercept + $10B24F2\r\n(0000000001150BC7){FHIRServer.exe} [0000000001551BC7] Unknown function at TMethodImplementationIntercept + $10AA8C7\r\n(00000000023509CA){FHIRServer.exe} [00000000027519CA] Unknown function at TMethodImplementationIntercept + $22AA6CA\r\n(000000000234D561){FHIRServer.exe} [000000000274E561] Unknown function at TMethodImplementationIntercept + $22A7261\r\n(0000000002348313){FHIRServer.exe} [0000000002749313] Unknown function at TMethodImplementationIntercept + $22A2013\r\n(0000000006CAD3CF){FHIRServer.exe} [00000000070AE3CF] Unknown function at TMethodImplementationIntercept + $6C070CF\r\n(000000000025CA0C){FHIRServer.exe} [000000000065DA0C] Unknown function at TMethodImplementationIntercept + $1B670C\r\n(000000000025E666){FHIRServer.exe} [000000000065F666] Unknown function at TMethodImplementationIntercept + $1B8366\r\n(000000000023789E){FHIRServer.exe} [000000000063889E] Unknown function at TMethodImplementationIntercept + $19159E\r\n(0000000000235961){FHIRServer.exe} [0000000000636961] Unknown function at TMethodImplementationIntercept + $18F661\r\n(000000000023CE94){FHIRServer.exe} [000000000063DE94] Unknown function at TMethodImplementationIntercept + $196B94\r\n(000000000023BDBD){FHIRServer.exe} [000000000063CDBD] Unknown function at TMethodImplementationIntercept + $195ABD\r\n(0000000000138173){FHIRServer.exe} [0000000000539173] Unknown function at TMethodImplementationIntercept + $91E73\r\n(0000000000011E3D){FHIRServer.exe} [0000000000412E3D]\r\n(00000000000003D2){KERNEL32.DLL} [00007FFDEFEA13D2] BaseThreadInitThunk + $22\r\n(0000000000014504){ntdll.dll } [00007FFDF0F85504] RtlUserThreadStart + $34\r\n"}]} </pre> @@ -1442,7 +1439,7 @@ Accept: application/fhir+json Content-Type: application/fhir+json;charset=UTF-8 -{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"},{"name":"includeDefinition","valueBoolean":false},{"name":"excludeNested","valueBoolean":false},{"name":"incomplete-ok","valueBoolean":true},{"name":"valueSet","resource":{"resourceType":"ValueSet","id":"example-study-data-dictionary-case-control-vs-1","text":{"status":"generated","div":"<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include these codes as defined in <code>https://uts.nlm.nih.gov/uts/umls</code><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C99269</td><td>Case</td></tr><tr><td>C99270</td><td>Control</td></tr></table></li></ul></div>"},"url":"https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1","version":"0.2.0","name":"ExampleStudyDataDictionaryCaseControlVS1","title":"Case/Control Vars for 'status' categoricals","status":"draft","date":"2022-11-28T21:07:57+00:00","publisher":"NCPI FHIR Working Group","contact":[{"name":"NCPI FHIR Working Group","telecom":[{"system":"url","value":"https://github.com/nih-ncpi"}]},{"name":"Meen Chul Kim","telecom":[{"system":"email","value":"meenchul@d3b.center","use":"work"}]}],"description":"Example ValueSet listing all possible 'values' from the Case/Control variable.","compose":{"include":[{"system":"https://uts.nlm.nih.gov/uts/umls","concept":[{"code":"C99269","display":"Case"},{"code":"C99270","display":"Control"}]}]}}},{"name":"_limit","valueString":"1000"},{"name":"_incomplete","valueString":"true"}]} +{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"},{"name":"includeDefinition","valueBoolean":false},{"name":"excludeNested","valueBoolean":false},{"name":"incomplete-ok","valueBoolean":true},{"name":"valueSet","resource":{"resourceType":"ValueSet","id":"example-study-data-dictionary-case-control-vs-1","text":{"status":"generated","div":"<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include these codes as defined in <code>https://uts.nlm.nih.gov/uts/umls</code><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C99269</td><td>Case</td></tr><tr><td>C99270</td><td>Control</td></tr></table></li></ul></div>"},"url":"https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/example-study-data-dictionary-case-control-vs-1","version":"0.2.0","name":"ExampleStudyDataDictionaryCaseControlVS1","title":"Case/Control Vars for 'status' categoricals","status":"draft","date":"2022-12-09T17:30:30+00:00","publisher":"NCPI FHIR Working Group","contact":[{"name":"NCPI FHIR Working Group","telecom":[{"system":"url","value":"https://github.com/nih-ncpi"}]},{"name":"Meen Chul Kim","telecom":[{"system":"email","value":"meenchul@d3b.center","use":"work"}]}],"description":"Example ValueSet listing all possible 'values' from the Case/Control variable.","compose":{"include":[{"system":"https://uts.nlm.nih.gov/uts/umls","concept":[{"code":"C99269","display":"Case"},{"code":"C99270","display":"Control"}]}]}}},{"name":"_limit","valueString":"1000"},{"name":"_incomplete","valueString":"true"}]} </pre> <pre> 422 @@ -1452,9 +1449,9 @@ connection:keep-alive content-length:3656 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:52 GMT +date:Fri, 09 Dec 2022 17:31:32 GMT server:nginx -x-request-id:57-438735 +x-request-id:60-1125569 {"resourceType" : "OperationOutcome","text" : {"status" : "generated","div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls</p></div>"},"issue" : [{"severity" : "error","code" : "not-supported","details" : {"text" : "Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls"},"diagnostics" : "(0000000000ECECED){FHIRServer.exe} [00000000012CFCED] Unknown function at TMethodImplementationIntercept + $E289ED\r\n(000000000033D7AC){FHIRServer.exe} [000000000073E7AC] Unknown function at TMethodImplementationIntercept + $2974AC\r\n(000000000033F46E){FHIRServer.exe} [000000000074046E] Unknown function at TMethodImplementationIntercept + $29916E\r\n(000000000004B6F7){FHIRServer.exe} [000000000044C6F7] Unknown function at __dbk_fcall_wrapper + $2E2F7\r\n(000000000004BFEB){FHIRServer.exe} [000000000044CFEB] Unknown function at __dbk_fcall_wrapper + $2EBEB\r\n(0000000000011276){FHIRServer.exe} [0000000000412276]\r\n(00000000000112B1){FHIRServer.exe} [00000000004122B1]\r\n(0000000000ECECED){FHIRServer.exe} [00000000012CFCED] Unknown function at TMethodImplementationIntercept + $E289ED\r\n(0000000000EDAEDE){FHIRServer.exe} [00000000012DBEDE] Unknown function at TMethodImplementationIntercept + $E34BDE\r\n(0000000000ED861B){FHIRServer.exe} [00000000012D961B] Unknown function at TMethodImplementationIntercept + $E3231B\r\n(0000000000ED72AF){FHIRServer.exe} [00000000012D82AF] Unknown function at TMethodImplementationIntercept + $E30FAF\r\n(000000000109CE14){FHIRServer.exe} [000000000149DE14] Unknown function at TMethodImplementationIntercept + $FF6B14\r\n(000000000109C5C4){FHIRServer.exe} [000000000149D5C4] Unknown function at TMethodImplementationIntercept + $FF62C4\r\n(00000000013DCA77){FHIRServer.exe} [00000000017DDA77] Unknown function at TMethodImplementationIntercept + $1336777\r\n(00000000011587F2){FHIRServer.exe} [00000000015597F2] Unknown function at TMethodImplementationIntercept + $10B24F2\r\n(0000000001150BC7){FHIRServer.exe} [0000000001551BC7] Unknown function at TMethodImplementationIntercept + $10AA8C7\r\n(00000000023509CA){FHIRServer.exe} [00000000027519CA] Unknown function at TMethodImplementationIntercept + $22AA6CA\r\n(000000000234D561){FHIRServer.exe} [000000000274E561] Unknown function at TMethodImplementationIntercept + $22A7261\r\n(0000000002348313){FHIRServer.exe} [0000000002749313] Unknown function at TMethodImplementationIntercept + $22A2013\r\n(0000000006CAD3CF){FHIRServer.exe} [00000000070AE3CF] Unknown function at TMethodImplementationIntercept + $6C070CF\r\n(000000000025CA0C){FHIRServer.exe} [000000000065DA0C] Unknown function at TMethodImplementationIntercept + $1B670C\r\n(000000000025E666){FHIRServer.exe} [000000000065F666] Unknown function at TMethodImplementationIntercept + $1B8366\r\n(000000000023789E){FHIRServer.exe} [000000000063889E] Unknown function at TMethodImplementationIntercept + $19159E\r\n(0000000000235961){FHIRServer.exe} [0000000000636961] Unknown function at TMethodImplementationIntercept + $18F661\r\n(000000000023CE94){FHIRServer.exe} [000000000063DE94] Unknown function at TMethodImplementationIntercept + $196B94\r\n(000000000023BDBD){FHIRServer.exe} [000000000063CDBD] Unknown function at TMethodImplementationIntercept + $195ABD\r\n(0000000000138173){FHIRServer.exe} [0000000000539173] Unknown function at TMethodImplementationIntercept + $91E73\r\n(0000000000011E3D){FHIRServer.exe} [0000000000412E3D]\r\n(00000000000003D2){KERNEL32.DLL} [00007FFDEFEA13D2] BaseThreadInitThunk + $22\r\n(0000000000014504){ntdll.dll } [00007FFDF0F85504] RtlUserThreadStart + $34\r\n"}]} </pre> @@ -1478,12 +1475,12 @@ connection:keep-alive content-length:259 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:56 GMT -last-modified:Mon, 28 Nov 2022 21:08:56 GMT +date:Fri, 09 Dec 2022 17:31:36 GMT +last-modified:Fri, 09 Dec 2022 17:31:36 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438744 +x-request-id:60-1125574 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "World"},{"name" : "system","valueString" : "http://unstats.un.org/unsd/methods/m49/m49.htm"},{"name" : "code","valueString" : "001"},{"name" : "result","valueBoolean" : true}]} </pre> @@ -1496,7 +1493,7 @@ Accept: application/fhir+json Content-Type: application/fhir+json;charset=UTF-8 -{"resourceType":"Parameters","parameter":[{"name":"coding","valueCoding":{"system":"http://unstats.un.org/unsd/methods/m49/m49.htm","code":"001"}},{"name":"displayLanguage","valueString":"en-US"},{"name":"default-to-latest-version","valueBoolean":true},{"name":"url","valueUri":"http://hl7.org/fhir/ValueSet/jurisdiction--2|4.0.1"},{"name":"cache-id","valueString":"f7a2d3d6-b705-419a-b131-7120bb379529"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} +{"resourceType":"Parameters","parameter":[{"name":"coding","valueCoding":{"system":"http://unstats.un.org/unsd/methods/m49/m49.htm","code":"001"}},{"name":"displayLanguage","valueString":"en-US"},{"name":"default-to-latest-version","valueBoolean":true},{"name":"url","valueUri":"http://hl7.org/fhir/ValueSet/jurisdiction--2|4.0.1"},{"name":"cache-id","valueString":"1bd0ee1e-301d-4730-9f0d-cc7cce05bada"},{"name":"profile","resource":{"resourceType":"Parameters","parameter":[{"name":"x-system-cache-id","valueString":"dc8fd4bc-091a-424a-8a3b-6198ef146891"}]}}]} </pre> <pre> 200 @@ -1507,12 +1504,12 @@ connection:keep-alive content-length:259 content-type:application/fhir+json -date:Mon, 28 Nov 2022 21:08:56 GMT -last-modified:Mon, 28 Nov 2022 21:08:56 GMT +date:Fri, 09 Dec 2022 17:31:36 GMT +last-modified:Fri, 09 Dec 2022 17:31:36 GMT pragma:no-cache server:nginx x-gdpr-disclosure:All access to this server is logged as AuditEvent Resources, and these store your ip address (and logged in user, if one exists). Also, your IP address is logged with Google Analytics for building geomaps of server usage. Your continued use of the API constitutes agreement to these terms. See [link] for erasure requests -x-request-id:57-438745 +x-request-id:60-1125575 {"resourceType" : "Parameters","parameter" : [{"name" : "display","valueString" : "World"},{"name" : "system","valueString" : "http://unstats.un.org/unsd/methods/m49/m49.htm"},{"name" : "code","valueString" : "001"},{"name" : "result","valueBoolean" : true}]} </pre> diff --git a/qa.html b/qa.html index a5b290b6..f30d3e14 100644 --- a/qa.html +++ b/qa.html @@ -36,13 +36,13 @@ </head> <body style="margin: 20px; background-color: #ffffff"> <h1>Validation Results for NCPIFHIRImplementationGuide</h1> - <p>Generated Mon Nov 28 21:09:26 UTC 2022, FHIR version 4.0.1 for NCPI-FHIR-Implementation-Guide#0.2.0 (canonical = <a href="https://nih-ncpi.github.io/ncpi-fhir-ig">https://nih-ncpi.github.io/ncpi-fhir-ig</a> (<a href="https://nih-ncpi.github.io/ncpi-fhir-ig/history.html">history</a>)). See <a href="qa.min.html">Errors Only</a></p> + <p>Generated Fri Dec 09 17:32:05 UTC 2022, FHIR version 4.0.1 for NCPI-FHIR-Implementation-Guide#0.2.0 (canonical = <a href="https://nih-ncpi.github.io/ncpi-fhir-ig">https://nih-ncpi.github.io/ncpi-fhir-ig</a> (<a href="https://nih-ncpi.github.io/ncpi-fhir-ig/history.html">history</a>)). See <a href="qa.min.html">Errors Only</a></p> <table class="grid"> <tr><td colspan=2><b>Quality Checks</b></td></tr> - <tr><td>Publisher Version:</td><td><span>IG Publisher Version: v1.2.19</span></td></tr> + <tr><td>Publisher Version:</td><td><span>IG Publisher Version: v1.2.22</span></td></tr> <tr><td>Publication Code:</td><td>n/a<span style="color: maroon; font-weight: bold"> </span>. PackageId = NCPI-FHIR-Implementation-Guide, Canonical = https://nih-ncpi.github.io/ncpi-fhir-ig</td></tr> <tr><td>Realm Check for n/a:</td><td><span style="color: maroon; font-weight: bold"></span><ul><li>n/a</li></ul></td></tr> - <tr><td>Publication Request:</td><td><ul><li><span title="Invalid HTTP response 404 from https://nih-ncpi.github.io/ncpi-fhir-ig/package-list.json?nocache=1669669765812 (Not Found) (content in /tmp/fhir-http-3.log)">This IG has never been published</span> <img src="information.png" height="16px" width="16px"/></li> -<li>This IG has never been published, so the version should start with 0. <img src="icon-warning.png" height="16px" width="16px"/></li> + <tr><td>Publication Request:</td><td><ul><li><span title="Invalid HTTP response 404 from https://nih-ncpi.github.io/ncpi-fhir-ig/package-list.json?nocache=1670607125536 (Not Found) (content in /tmp/fhir-http-3.log)">This IG has never been published</span> <img src="information.png" height="16px" width="16px"/></li> +<li>This IG has never been published, so the version should start with '0.' or include a patch version e.g. '-ballot' <img src="icon-warning.png" height="16px" width="16px"/></li> <li>No publication request found <img src="information.png" height="16px" width="16px"/></li> </ul> </td></tr> @@ -57,7 +57,7 @@ <h1>Validation Results for NCPIFHIRImplementationGuide</h1> <tr><td>HTA Analysis:</td><td><i>Non-HL7 Igs are exempt from terminology dependency analysis</i></td></tr> <tr><td>R5 Dependencies:</td><td><span style="color: grey">(none)</span></td></tr> <tr><td>Modifier Extensions:</td><td><span style="color: grey">(none)</span></td></tr> - <tr><td>Previous Version Comparison:</td><td> Unable to compare with previous version: Unable to find version history at https://nih-ncpi.github.io/ncpi-fhir-ig (Problem #1 with package-list.json at https://nih-ncpi.github.io/ncpi-fhir-ig: Invalid HTTP response 404 from https://nih-ncpi.github.io/ncpi-fhir-ig/package-list.json?nocache=1669669675793 (Not Found) (content in /tmp/fhir-http-2.log))</td></tr> + <tr><td>Previous Version Comparison:</td><td> Unable to compare with previous version: Unable to find version history at https://nih-ncpi.github.io/ncpi-fhir-ig (Problem #1 with package-list.json at https://nih-ncpi.github.io/ncpi-fhir-ig: Invalid HTTP response 404 from https://nih-ncpi.github.io/ncpi-fhir-ig/package-list.json?nocache=1670607028679 (Not Found) (content in /tmp/fhir-http-2.log))</td></tr> <tr><td>IPA Comparison:</td><td> n/a</td></tr> <tr><td>Summary:</td><td> errors = 22, warn = 50, info = 26, broken links = 15</td></tr> </table> @@ -354,13 +354,13 @@ <h2><a href="">n/a</a> <span id="sv" class="toggle" onclick="toggle('v')">Show V <td><b><a href="ValueSet-datatable-mappings-valueset-1.html#l606">output/ValueSet-datatable-mappings-valueset-1.html#/html/body/div/div/div/div/div/div/ul/li/table/tr/td/a at Line 322, column 1592</a></b></td><td><b>error</b></td><td><b>The link 'CodeSystem-mondo.html#mondo-0007130' for "0007130" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, segment-breadcrumb])</b></td> </tr> <tr style="background-color: #ffcccc"> - <td><b><a href="ValueSet-datatable-valueset-1.html#l619">output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 326, column 3412</a></b></td><td><b>error</b></td><td><b>The link 'CodeSystem-hpo.html#hpo-HP.580010772' for "HP:0010772" cannot be resolved (valid targets: 1893 targets)</b></td> + <td><b><a href="ValueSet-datatable-valueset-1.html#l619">output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 326, column 3418</a></b></td><td><b>error</b></td><td><b>The link 'CodeSystem-hpo.html#hpo-HP.580010772' for "HP:0010772" cannot be resolved (valid targets: 1893 targets)</b></td> </tr> <tr style="background-color: #ffcccc"> - <td><b><a href="ValueSet-datatable-valueset-1.html#l619">output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 326, column 3511</a></b></td><td><b>error</b></td><td><b>The link 'CodeSystem-mondo.html#mondo-MONDO.580017705' for "MONDO:0017705" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, segment-breadcrumb])</b></td> + <td><b><a href="ValueSet-datatable-valueset-1.html#l619">output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 326, column 3517</a></b></td><td><b>error</b></td><td><b>The link 'CodeSystem-mondo.html#mondo-MONDO.580017705' for "MONDO:0017705" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, segment-breadcrumb])</b></td> </tr> <tr style="background-color: #ffcccc"> - <td><b><a href="ValueSet-datatable-valueset-1.html#l619">output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 326, column 3620</a></b></td><td><b>error</b></td><td><b>The link 'CodeSystem-mondo.html#mondo-MONDO.580007130' for "MONDO:0007130" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, segment-breadcrumb])</b></td> + <td><b><a href="ValueSet-datatable-valueset-1.html#l619">output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 326, column 3626</a></b></td><td><b>error</b></td><td><b>The link 'CodeSystem-mondo.html#mondo-MONDO.580007130' for "MONDO:0007130" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, segment-breadcrumb])</b></td> </tr> <tr style="background-color: #ffcccc"> <td><b><a href="example_raw_data.html#l454">output/example_raw_data.html#/html/body/div/div/div/div/div/table/tbody/tr/td/a at Line 256, column 114</a></b></td><td><b>error</b></td><td><b>The link 'CodeSystem-example-study-dd-dataset-codesystem-1.html' for "dataset CodeSystem" cannot be resolved</b></td> @@ -400,10 +400,10 @@ <h2><a href="ActivityDefinition-example-study-data-dictionary-table-1.html">fsh- <td><b>Path</b></td><td><b>Severity</b></td><td><b>Message</b></td> </tr> <tr style="background-color: #ffffe6"> - <td><b>ActivityDefinition.topic[0].coding[0]</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> + <td><b>ActivityDefinition.topic[0].coding[0] (l1/c725)</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>ActivityDefinition.code.coding[0]</b></td><td><b>warning</b></td><td title="Terminology_PassThrough_TX_Message"><b>Display Name for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1#demographics should be one of 0 choices from '', not 'Demographic data' for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1#demographics'</b></td> + <td><b>ActivityDefinition.code.coding[0] (l1/c912)</b></td><td><b>warning</b></td><td title="Terminology_PassThrough_TX_Message"><b>Display Name for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1#demographics should be one of 0 choices from '', not 'Demographic data' for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1#demographics'</b></td> </tr> </table> <hr/> @@ -419,10 +419,10 @@ <h2><a href="CodeSystem-ConditionInheritanceMode.html">fsh-generated/resources/C <td><b>CodeSystem</b></td><td><b>information</b></td><td title=""><b>CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c6945)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c6945)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> </table> <hr/> @@ -438,10 +438,10 @@ <h2><a href="CodeSystem-example-study-data-dictionary-dataset-codesystem-1.html" <td><b>CodeSystem</b></td><td><b>information</b></td><td title=""><b>CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c1255)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c1255)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> </table> <hr/> @@ -457,10 +457,10 @@ <h2><a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.htm <td><b>CodeSystem</b></td><td><b>information</b></td><td title=""><b>CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c2302)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c2302)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> </table> <hr/> @@ -482,7 +482,7 @@ <h2><a href="CodeSystem-hpo.html">fsh-generated/resources/CodeSystem-hpo.json</a <td><b>CodeSystem</b></td><td><b>information</b></td><td title=""><b>Review the All Codes Value Set - incomplete CodeSystems generally should not have an all codes value set specified</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c336911)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> <tr style="background-color: #ffcccc"> <td><b>fsh-generated/resources/CodeSystem-hpo</b></td><td><b>error</b></td><td title=""><b>URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/hpo vs http://purl.obolibrary.org/obo/hp.owl</b></td> @@ -549,7 +549,7 @@ <h2><a href="CodeSystem-ncpi.html">fsh-generated/resources/CodeSystem-ncpi.json< <td><b>CodeSystem</b></td><td><b>information</b></td><td title=""><b>CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c4550)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> </table> <hr/> @@ -565,7 +565,7 @@ <h2><a href="CodeSystem-ncpi-data-types.html">fsh-generated/resources/CodeSystem <td><b>CodeSystem</b></td><td><b>information</b></td><td title=""><b>CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c1529)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> </table> <hr/> @@ -600,7 +600,7 @@ <h2><a href="CodeSystem-tbd-codes.html">fsh-generated/resources/CodeSystem-tbd-c <td><b>CodeSystem</b></td><td><b>warning</b></td><td title=""><b>HL7 Defined CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly</b></td> </tr> <tr style="background-color: #ffcccc"> - <td><b>CodeSystem</b></td><td><b>error</b></td><td title="CODESYSTEM_SHAREABLE_MISSING_HL7"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not found. HL7 Published code systems SHALL conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c8451)</b></td><td><b>error</b></td><td title="CODESYSTEM_SHAREABLE_MISSING_HL7"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not found. HL7 Published code systems SHALL conform to the ShareableCodeSystem profile</b></td> </tr> <tr style="background-color: #ffcccc"> <td><b>fsh-generated/resources/CodeSystem-tbd-codes</b></td><td><b>error</b></td><td title=""><b>URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/tbd-codes vs http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes</b></td> @@ -622,7 +622,7 @@ <h2><a href="CodeSystem-v3-hgvs.html">fsh-generated/resources/CodeSystem-v3-hgvs <td><b>CodeSystem</b></td><td><b>information</b></td><td title=""><b>CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c11769)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> <tr style="background-color: #ffcccc"> <td><b>fsh-generated/resources/CodeSystem-v3-hgvs</b></td><td><b>error</b></td><td title=""><b>URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/v3-hgvs vs http://varnomen.hgvs.org</b></td> @@ -730,10 +730,10 @@ <h2><a href="ImplementationGuide-NCPI-FHIR-Implementation-Guide.html">fsh-genera <td><b>Path</b></td><td><b>Severity</b></td><td><b>Message</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>ImplementationGuide.definition.resource[7].description</b></td><td><b>warning</b></td><td title="Type_Specific_Checks_DT_String_WS"><b>value should not start or finish with whitespace 'A...Task '</b></td> + <td><b>ImplementationGuide.definition.resource[7].description (l1/c13013)</b></td><td><b>warning</b></td><td title="Type_Specific_Checks_DT_String_WS"><b>value should not start or finish with whitespace 'A...Task '</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>ImplementationGuide.definition.resource[12].description</b></td><td><b>warning</b></td><td title="Type_Specific_Checks_DT_String_WS"><b>value should not start or finish with whitespace 'Grouping...etc. '</b></td> + <td><b>ImplementationGuide.definition.resource[12].description (l1/c15498)</b></td><td><b>warning</b></td><td title="Type_Specific_Checks_DT_String_WS"><b>value should not start or finish with whitespace 'Grouping...etc. '</b></td> </tr> </table> <hr/> @@ -1061,16 +1061,16 @@ <h2><a href="QuestionnaireResponse-example-questionnaire-demographics-response-1 <td><b>Path</b></td><td><b>Severity</b></td><td><b>Message</b></td> </tr> <tr style="background-color: #ffcccc"> - <td><b>QuestionnaireResponse.subject (l8/c4)</b></td><td><b>error</b></td><td title="Reference_REF_CantResolve"><b>Unable to resolve resource with reference 'example-sum-patient-1'</b></td> + <td><b>QuestionnaireResponse.subject (l6/c4)</b></td><td><b>error</b></td><td title="Reference_REF_CantResolve"><b>Unable to resolve resource with reference 'example-sum-patient-1'</b></td> </tr> <tr style="background-color: #ffffe6"> - <td><b>QuestionnaireResponse.item[3].answer[0].value.ofType(Coding) (l48/c30)</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> + <td><b>QuestionnaireResponse.item[3].answer[0].value.ofType(Coding) (l47/c12)</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> </tr> <tr style="background-color: #ffffe6"> - <td><b>QuestionnaireResponse.item[1].answer[0] (l25/c10)</b></td><td><b>information</b></td><td title="Questionnaire_QR_Item_StringNoOptions"><b>Cannot validate string answer option because no option list is provided</b></td> + <td><b>QuestionnaireResponse.item[1].answer[0] (l24/c34)</b></td><td><b>information</b></td><td title="Questionnaire_QR_Item_StringNoOptions"><b>Cannot validate string answer option because no option list is provided</b></td> </tr> <tr style="background-color: #ffcccc"> - <td><b>QuestionnaireResponse.item[3].answer[0] (l48/c30)</b></td><td><b>error</b></td><td title="Questionnaire_QR_Item_BadOption"><b>The value provided (https://uts.nlm.nih.gov/uts/umls::C99269) is not in the options value set in the questionnaire</b></td> + <td><b>QuestionnaireResponse.item[3].answer[0] (l47/c12)</b></td><td><b>error</b></td><td title="Questionnaire_QR_Item_BadOption"><b>The value provided (https://uts.nlm.nih.gov/uts/umls::C99269) is not in the options value set in the questionnaire</b></td> </tr> </table> <hr/> @@ -1331,10 +1331,10 @@ <h2><a href="StructureDefinition-study-group.html">fsh-generated/resources/Struc <td><b>Path</b></td><td><b>Severity</b></td><td><b>Message</b></td> </tr> <tr style="background-color: #ffcccc"> - <td><b>StructureDefinition.snapshot.element[13].pattern.ofType(CodeableConcept).coding[0]</b></td><td><b>error</b></td><td><b>Local Error: Resolved system http://snomed.info/sct, but the definition is not complete. Server Error: Unable to find code 44807982 in http://snomed.info/sct (version http://snomed.info/sct/900000000000207008/version/20220731); The code "44807982" is not valid in the system http://snomed.info/sct; The code provided (http://snomed.info/sct#44807982) is not valid in the value set 'All codes known to the system' (from http://tx.fhir.org/r4) for 'http://snomed.info/sct#44807982'</b> (<a href="qa-tx.html#l17">see Tx log</a>)</td> + <td><b>StructureDefinition.snapshot.element[13].pattern.ofType(CodeableConcept).coding[0] (l1/c42155)</b></td><td><b>error</b></td><td><b>Local Error: Resolved system http://snomed.info/sct, but the definition is not complete. Server Error: Unable to find code 44807982 in http://snomed.info/sct (version http://snomed.info/sct/900000000000207008/version/20220731); The code "44807982" is not valid in the system http://snomed.info/sct; The code provided (http://snomed.info/sct#44807982) is not valid in the value set 'All codes known to the system' (from http://tx.fhir.org/r4) for 'http://snomed.info/sct#44807982'</b> (<a href="qa-tx.html#l17">see Tx log</a>)</td> </tr> <tr style="background-color: #ffcccc"> - <td><b>StructureDefinition.differential.element[3].pattern.ofType(CodeableConcept).coding[0]</b></td><td><b>error</b></td><td><b>Local Error: Resolved system http://snomed.info/sct, but the definition is not complete. Server Error: Unable to find code 44807982 in http://snomed.info/sct (version http://snomed.info/sct/900000000000207008/version/20220731); The code "44807982" is not valid in the system http://snomed.info/sct; The code provided (http://snomed.info/sct#44807982) is not valid in the value set 'All codes known to the system' (from http://tx.fhir.org/r4) for 'http://snomed.info/sct#44807982'</b> (<a href="qa-tx.html#l17">see Tx log</a>)</td> + <td><b>StructureDefinition.differential.element[3].pattern.ofType(CodeableConcept).coding[0] (l1/c63183)</b></td><td><b>error</b></td><td><b>Local Error: Resolved system http://snomed.info/sct, but the definition is not complete. Server Error: Unable to find code 44807982 in http://snomed.info/sct (version http://snomed.info/sct/900000000000207008/version/20220731); The code "44807982" is not valid in the system http://snomed.info/sct; The code provided (http://snomed.info/sct#44807982) is not valid in the value set 'All codes known to the system' (from http://tx.fhir.org/r4) for 'http://snomed.info/sct#44807982'</b> (<a href="qa-tx.html#l17">see Tx log</a>)</td> </tr> </table> <hr/> @@ -1347,10 +1347,10 @@ <h2><a href="StructureDefinition-study-summary.html">fsh-generated/resources/Str <td><b>Path</b></td><td><b>Severity</b></td><td><b>Message</b></td> </tr> <tr style="background-color: #ffffe6"> - <td><b>StructureDefinition.snapshot.element[17].pattern.ofType(Coding)</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> + <td><b>StructureDefinition.snapshot.element[17].pattern.ofType(Coding) (l1/c46857)</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> </tr> <tr style="background-color: #ffffe6"> - <td><b>StructureDefinition.differential.element[1].pattern.ofType(Coding)</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> + <td><b>StructureDefinition.differential.element[1].pattern.ofType(Coding) (l1/c101783)</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> </tr> <tr style="background-color: #ffffe6"> <td><b>StructureDefinition.snapshot.element[17].pattern.ofType(Coding)</b></td><td><b>information</b></td><td title=""><b>The repeating element has a pattern. The pattern will apply to all the repeats (this has not been clear to all users)</b></td> @@ -1369,10 +1369,10 @@ <h2><a href="StructureDefinition-study-variable-summary.html">fsh-generated/reso <td><b>Path</b></td><td><b>Severity</b></td><td><b>Message</b></td> </tr> <tr style="background-color: #ffffe6"> - <td><b>StructureDefinition.snapshot.element[17].pattern.ofType(Coding)</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> + <td><b>StructureDefinition.snapshot.element[17].pattern.ofType(Coding) (l1/c50516)</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> </tr> <tr style="background-color: #ffffe6"> - <td><b>StructureDefinition.differential.element[1].pattern.ofType(Coding)</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> + <td><b>StructureDefinition.differential.element[1].pattern.ofType(Coding) (l1/c106938)</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> </tr> <tr style="background-color: #ffffe6"> <td><b>StructureDefinition.snapshot.element[17].pattern.ofType(Coding)</b></td><td><b>information</b></td><td title=""><b>The repeating element has a pattern. The pattern will apply to all the repeats (this has not been clear to all users)</b></td> @@ -1418,7 +1418,7 @@ <h2><a href="ValueSet-condition-inheritance-vs.html">fsh-generated/resources/Val <td><b>Path</b></td><td><b>Severity</b></td><td><b>Message</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>ValueSet</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> + <td><b>ValueSet (l1/c1128)</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> </tr> </table> <hr/> @@ -1434,7 +1434,7 @@ <h2><a href="ValueSet-datatable-mappings-valueset-1.html">fsh-generated/resource <td><b>ValueSet.compose[0].include[0]</b></td><td><b>warning</b></td><td title=""><b>Unknown System 'https://uts.nlm.nih.gov/uts/umls' specified, so Concepts and Filters can't be checked (Details: Local Error: Unable to resolve system https://uts.nlm.nih.gov/uts/umls. Server Error: The code system 'https://uts.nlm.nih.gov/uts/umls' is not known (encountered paired with code = 'C2348584'); The code provided (https://uts.nlm.nih.gov/uts/umls#C2348584) is not valid in the value set 'All codes known to the system' (from http://tx.fhir.org/r4))</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>ValueSet</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> + <td><b>ValueSet (l1/c3365)</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> </tr> <tr style="background-color: #ffebcc"> <td><b>ValueSet.where(id = 'datatable-mappings-valueset-1')</b></td><td><b>warning</b></td><td><b>Error from server: Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls</b> (<a href="qa-tx.html#l50">see Tx log</a>)</td> @@ -1450,7 +1450,7 @@ <h2><a href="ValueSet-datatable-valueset-1.html">fsh-generated/resources/ValueSe <td><b>Path</b></td><td><b>Severity</b></td><td><b>Message</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>ValueSet</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> + <td><b>ValueSet (l1/c1040)</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> </tr> </table> <hr/> @@ -1476,7 +1476,7 @@ <h2><a href="ValueSet-example-study-data-dictionary-case-control-vs-1.html">fsh- <td><b>ValueSet.compose[0].include[0]</b></td><td><b>warning</b></td><td title=""><b>Unknown System 'https://uts.nlm.nih.gov/uts/umls' specified, so Concepts and Filters can't be checked (Details: Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated)</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>ValueSet</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> + <td><b>ValueSet (l1/c1237)</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> </tr> <tr style="background-color: #ffebcc"> <td><b>ValueSet.where(id = 'example-study-data-dictionary-case-control-vs-1')</b></td><td><b>warning</b></td><td><b>Error from server: Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls</b> (<a href="qa-tx.html#l52">see Tx log</a>)</td> @@ -1502,7 +1502,7 @@ <h2><a href="ValueSet-ncpi-vs.html">fsh-generated/resources/ValueSet-ncpi-vs.jso <td><b>Path</b></td><td><b>Severity</b></td><td><b>Message</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>ValueSet</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> + <td><b>ValueSet (l1/c1173)</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> </tr> </table> <hr/> diff --git a/qa.json b/qa.json index 06302a24..edf44f17 100644 --- a/qa.json +++ b/qa.json @@ -1,12 +1,12 @@ { - "url": "https://nih-ncpi.github.io/ncpi-fhir-ig/ImplementationGuide/NCPI-FHIR-Implementation-Guide", - "name": "NCPIFHIRImplementationGuide", - "package-id": "NCPI-FHIR-Implementation-Guide", - "ig-ver": "0.2.0", - "date": "Mon, 28 Nov, 2022 21:07:57 +0000", - "errs": 22, - "warnings": 50, - "hints": 26, - "version": "4.0.1", - "tool": "5.0.0-ballot (3)" -} \ No newline at end of file + "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/ImplementationGuide/NCPI-FHIR-Implementation-Guide", + "name" : "NCPIFHIRImplementationGuide", + "package-id" : "NCPI-FHIR-Implementation-Guide", + "ig-ver" : "0.2.0", + "date" : "Fri, 09 Dec, 2022 17:30:30 +0000", + "errs" : 22, + "warnings" : 50, + "hints" : 26, + "version" : "4.0.1", + "tool" : "5.0.0-ballot (3)" +} diff --git a/qa.min.html b/qa.min.html index 0810a9fb..6b43ff41 100644 --- a/qa.min.html +++ b/qa.min.html @@ -36,13 +36,13 @@ </head> <body style="margin: 20px; background-color: #ffffff"> <h1>Validation Results for NCPIFHIRImplementationGuide</h1> - <p>Generated Mon Nov 28 21:09:26 UTC 2022, FHIR version 4.0.1 for NCPI-FHIR-Implementation-Guide#0.2.0 (canonical = <a href="https://nih-ncpi.github.io/ncpi-fhir-ig">https://nih-ncpi.github.io/ncpi-fhir-ig</a> (<a href="https://nih-ncpi.github.io/ncpi-fhir-ig/history.html">history</a>)). See <a href="qa.html">Full QA Report</a></p> + <p>Generated Fri Dec 09 17:32:06 UTC 2022, FHIR version 4.0.1 for NCPI-FHIR-Implementation-Guide#0.2.0 (canonical = <a href="https://nih-ncpi.github.io/ncpi-fhir-ig">https://nih-ncpi.github.io/ncpi-fhir-ig</a> (<a href="https://nih-ncpi.github.io/ncpi-fhir-ig/history.html">history</a>)). See <a href="qa.html">Full QA Report</a></p> <table class="grid"> <tr><td colspan=2><b>Quality Checks</b></td></tr> - <tr><td>Publisher Version:</td><td><span>IG Publisher Version: v1.2.19</span></td></tr> + <tr><td>Publisher Version:</td><td><span>IG Publisher Version: v1.2.22</span></td></tr> <tr><td>Publication Code:</td><td>n/a<span style="color: maroon; font-weight: bold"> </span>. PackageId = NCPI-FHIR-Implementation-Guide, Canonical = https://nih-ncpi.github.io/ncpi-fhir-ig</td></tr> <tr><td>Realm Check for n/a:</td><td><span style="color: maroon; font-weight: bold"></span><ul><li>n/a</li></ul></td></tr> - <tr><td>Publication Request:</td><td><ul><li><span title="Invalid HTTP response 404 from https://nih-ncpi.github.io/ncpi-fhir-ig/package-list.json?nocache=1669669765812 (Not Found) (content in /tmp/fhir-http-3.log)">This IG has never been published</span> <img src="information.png" height="16px" width="16px"/></li> -<li>This IG has never been published, so the version should start with 0. <img src="icon-warning.png" height="16px" width="16px"/></li> + <tr><td>Publication Request:</td><td><ul><li><span title="Invalid HTTP response 404 from https://nih-ncpi.github.io/ncpi-fhir-ig/package-list.json?nocache=1670607125536 (Not Found) (content in /tmp/fhir-http-3.log)">This IG has never been published</span> <img src="information.png" height="16px" width="16px"/></li> +<li>This IG has never been published, so the version should start with '0.' or include a patch version e.g. '-ballot' <img src="icon-warning.png" height="16px" width="16px"/></li> <li>No publication request found <img src="information.png" height="16px" width="16px"/></li> </ul> </td></tr> @@ -57,7 +57,7 @@ <h1>Validation Results for NCPIFHIRImplementationGuide</h1> <tr><td>HTA Analysis:</td><td><i>Non-HL7 Igs are exempt from terminology dependency analysis</i></td></tr> <tr><td>R5 Dependencies:</td><td><span style="color: grey">(none)</span></td></tr> <tr><td>Modifier Extensions:</td><td><span style="color: grey">(none)</span></td></tr> - <tr><td>Previous Version Comparison:</td><td> Unable to compare with previous version: Unable to find version history at https://nih-ncpi.github.io/ncpi-fhir-ig (Problem #1 with package-list.json at https://nih-ncpi.github.io/ncpi-fhir-ig: Invalid HTTP response 404 from https://nih-ncpi.github.io/ncpi-fhir-ig/package-list.json?nocache=1669669675793 (Not Found) (content in /tmp/fhir-http-2.log))</td></tr> + <tr><td>Previous Version Comparison:</td><td> Unable to compare with previous version: Unable to find version history at https://nih-ncpi.github.io/ncpi-fhir-ig (Problem #1 with package-list.json at https://nih-ncpi.github.io/ncpi-fhir-ig: Invalid HTTP response 404 from https://nih-ncpi.github.io/ncpi-fhir-ig/package-list.json?nocache=1670607028679 (Not Found) (content in /tmp/fhir-http-2.log))</td></tr> <tr><td>IPA Comparison:</td><td> n/a</td></tr> <tr><td>Summary:</td><td> errors = 22, warn = 50, info = 26, broken links = 15</td></tr> </table> @@ -195,13 +195,13 @@ <h2><a href="">n/a</a> <span id="sv" class="toggle" onclick="toggle('v')">Show V <td><b><a href="ValueSet-datatable-mappings-valueset-1.html#l606">output/ValueSet-datatable-mappings-valueset-1.html#/html/body/div/div/div/div/div/div/ul/li/table/tr/td/a at Line 322, column 1592</a></b></td><td><b>error</b></td><td><b>The link 'CodeSystem-mondo.html#mondo-0007130' for "0007130" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, segment-breadcrumb])</b></td> </tr> <tr style="background-color: #ffcccc"> - <td><b><a href="ValueSet-datatable-valueset-1.html#l619">output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 326, column 3412</a></b></td><td><b>error</b></td><td><b>The link 'CodeSystem-hpo.html#hpo-HP.580010772' for "HP:0010772" cannot be resolved (valid targets: 1893 targets)</b></td> + <td><b><a href="ValueSet-datatable-valueset-1.html#l619">output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 326, column 3418</a></b></td><td><b>error</b></td><td><b>The link 'CodeSystem-hpo.html#hpo-HP.580010772' for "HP:0010772" cannot be resolved (valid targets: 1893 targets)</b></td> </tr> <tr style="background-color: #ffcccc"> - <td><b><a href="ValueSet-datatable-valueset-1.html#l619">output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 326, column 3511</a></b></td><td><b>error</b></td><td><b>The link 'CodeSystem-mondo.html#mondo-MONDO.580017705' for "MONDO:0017705" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, segment-breadcrumb])</b></td> + <td><b><a href="ValueSet-datatable-valueset-1.html#l619">output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 326, column 3517</a></b></td><td><b>error</b></td><td><b>The link 'CodeSystem-mondo.html#mondo-MONDO.580017705' for "MONDO:0017705" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, segment-breadcrumb])</b></td> </tr> <tr style="background-color: #ffcccc"> - <td><b><a href="ValueSet-datatable-valueset-1.html#l619">output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 326, column 3620</a></b></td><td><b>error</b></td><td><b>The link 'CodeSystem-mondo.html#mondo-MONDO.580007130' for "MONDO:0007130" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, segment-breadcrumb])</b></td> + <td><b><a href="ValueSet-datatable-valueset-1.html#l619">output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 326, column 3626</a></b></td><td><b>error</b></td><td><b>The link 'CodeSystem-mondo.html#mondo-MONDO.580007130' for "MONDO:0007130" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, segment-breadcrumb])</b></td> </tr> <tr style="background-color: #ffcccc"> <td><b><a href="example_raw_data.html#l454">output/example_raw_data.html#/html/body/div/div/div/div/div/table/tbody/tr/td/a at Line 256, column 114</a></b></td><td><b>error</b></td><td><b>The link 'CodeSystem-example-study-dd-dataset-codesystem-1.html' for "dataset CodeSystem" cannot be resolved</b></td> @@ -241,10 +241,10 @@ <h2><a href="ActivityDefinition-example-study-data-dictionary-table-1.html">fsh- <td><b>Path</b></td><td><b>Severity</b></td><td><b>Message</b></td> </tr> <tr style="background-color: #ffffe6"> - <td><b>ActivityDefinition.topic[0].coding[0]</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> + <td><b>ActivityDefinition.topic[0].coding[0] (l1/c725)</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>ActivityDefinition.code.coding[0]</b></td><td><b>warning</b></td><td title="Terminology_PassThrough_TX_Message"><b>Display Name for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1#demographics should be one of 0 choices from '', not 'Demographic data' for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1#demographics'</b></td> + <td><b>ActivityDefinition.code.coding[0] (l1/c912)</b></td><td><b>warning</b></td><td title="Terminology_PassThrough_TX_Message"><b>Display Name for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1#demographics should be one of 0 choices from '', not 'Demographic data' for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1#demographics'</b></td> </tr> </table> <hr/> @@ -260,10 +260,10 @@ <h2><a href="CodeSystem-ConditionInheritanceMode.html">fsh-generated/resources/C <td><b>CodeSystem</b></td><td><b>information</b></td><td title=""><b>CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c6945)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c6945)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> </table> <hr/> @@ -279,10 +279,10 @@ <h2><a href="CodeSystem-example-study-data-dictionary-dataset-codesystem-1.html" <td><b>CodeSystem</b></td><td><b>information</b></td><td title=""><b>CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c1255)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c1255)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> </table> <hr/> @@ -298,10 +298,10 @@ <h2><a href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.htm <td><b>CodeSystem</b></td><td><b>information</b></td><td title=""><b>CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c2302)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c2302)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> </table> <hr/> @@ -323,7 +323,7 @@ <h2><a href="CodeSystem-hpo.html">fsh-generated/resources/CodeSystem-hpo.json</a <td><b>CodeSystem</b></td><td><b>information</b></td><td title=""><b>Review the All Codes Value Set - incomplete CodeSystems generally should not have an all codes value set specified</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c336911)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> <tr style="background-color: #ffcccc"> <td><b>fsh-generated/resources/CodeSystem-hpo</b></td><td><b>error</b></td><td title=""><b>URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/hpo vs http://purl.obolibrary.org/obo/hp.owl</b></td> @@ -390,7 +390,7 @@ <h2><a href="CodeSystem-ncpi.html">fsh-generated/resources/CodeSystem-ncpi.json< <td><b>CodeSystem</b></td><td><b>information</b></td><td title=""><b>CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c4550)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> </table> <hr/> @@ -406,7 +406,7 @@ <h2><a href="CodeSystem-ncpi-data-types.html">fsh-generated/resources/CodeSystem <td><b>CodeSystem</b></td><td><b>information</b></td><td title=""><b>CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c1529)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> </table> <hr/> @@ -441,7 +441,7 @@ <h2><a href="CodeSystem-tbd-codes.html">fsh-generated/resources/CodeSystem-tbd-c <td><b>CodeSystem</b></td><td><b>warning</b></td><td title=""><b>HL7 Defined CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly</b></td> </tr> <tr style="background-color: #ffcccc"> - <td><b>CodeSystem</b></td><td><b>error</b></td><td title="CODESYSTEM_SHAREABLE_MISSING_HL7"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not found. HL7 Published code systems SHALL conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c8451)</b></td><td><b>error</b></td><td title="CODESYSTEM_SHAREABLE_MISSING_HL7"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not found. HL7 Published code systems SHALL conform to the ShareableCodeSystem profile</b></td> </tr> <tr style="background-color: #ffcccc"> <td><b>fsh-generated/resources/CodeSystem-tbd-codes</b></td><td><b>error</b></td><td title=""><b>URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/tbd-codes vs http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes</b></td> @@ -463,7 +463,7 @@ <h2><a href="CodeSystem-v3-hgvs.html">fsh-generated/resources/CodeSystem-v3-hgvs <td><b>CodeSystem</b></td><td><b>information</b></td><td title=""><b>CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>CodeSystem</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> + <td><b>CodeSystem (l1/c11769)</b></td><td><b>warning</b></td><td title="CODESYSTEM_SHAREABLE_MISSING"><b>The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile</b></td> </tr> <tr style="background-color: #ffcccc"> <td><b>fsh-generated/resources/CodeSystem-v3-hgvs</b></td><td><b>error</b></td><td title=""><b>URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/v3-hgvs vs http://varnomen.hgvs.org</b></td> @@ -491,10 +491,10 @@ <h2><a href="ImplementationGuide-NCPI-FHIR-Implementation-Guide.html">fsh-genera <td><b>Path</b></td><td><b>Severity</b></td><td><b>Message</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>ImplementationGuide.definition.resource[7].description</b></td><td><b>warning</b></td><td title="Type_Specific_Checks_DT_String_WS"><b>value should not start or finish with whitespace 'A...Task '</b></td> + <td><b>ImplementationGuide.definition.resource[7].description (l1/c13013)</b></td><td><b>warning</b></td><td title="Type_Specific_Checks_DT_String_WS"><b>value should not start or finish with whitespace 'A...Task '</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>ImplementationGuide.definition.resource[12].description</b></td><td><b>warning</b></td><td title="Type_Specific_Checks_DT_String_WS"><b>value should not start or finish with whitespace 'Grouping...etc. '</b></td> + <td><b>ImplementationGuide.definition.resource[12].description (l1/c15498)</b></td><td><b>warning</b></td><td title="Type_Specific_Checks_DT_String_WS"><b>value should not start or finish with whitespace 'Grouping...etc. '</b></td> </tr> </table> <hr/> @@ -607,16 +607,16 @@ <h2><a href="QuestionnaireResponse-example-questionnaire-demographics-response-1 <td><b>Path</b></td><td><b>Severity</b></td><td><b>Message</b></td> </tr> <tr style="background-color: #ffcccc"> - <td><b>QuestionnaireResponse.subject (l8/c4)</b></td><td><b>error</b></td><td title="Reference_REF_CantResolve"><b>Unable to resolve resource with reference 'example-sum-patient-1'</b></td> + <td><b>QuestionnaireResponse.subject (l6/c4)</b></td><td><b>error</b></td><td title="Reference_REF_CantResolve"><b>Unable to resolve resource with reference 'example-sum-patient-1'</b></td> </tr> <tr style="background-color: #ffffe6"> - <td><b>QuestionnaireResponse.item[3].answer[0].value.ofType(Coding) (l48/c30)</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> + <td><b>QuestionnaireResponse.item[3].answer[0].value.ofType(Coding) (l47/c12)</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> </tr> <tr style="background-color: #ffffe6"> - <td><b>QuestionnaireResponse.item[1].answer[0] (l25/c10)</b></td><td><b>information</b></td><td title="Questionnaire_QR_Item_StringNoOptions"><b>Cannot validate string answer option because no option list is provided</b></td> + <td><b>QuestionnaireResponse.item[1].answer[0] (l24/c34)</b></td><td><b>information</b></td><td title="Questionnaire_QR_Item_StringNoOptions"><b>Cannot validate string answer option because no option list is provided</b></td> </tr> <tr style="background-color: #ffcccc"> - <td><b>QuestionnaireResponse.item[3].answer[0] (l48/c30)</b></td><td><b>error</b></td><td title="Questionnaire_QR_Item_BadOption"><b>The value provided (https://uts.nlm.nih.gov/uts/umls::C99269) is not in the options value set in the questionnaire</b></td> + <td><b>QuestionnaireResponse.item[3].answer[0] (l47/c12)</b></td><td><b>error</b></td><td title="Questionnaire_QR_Item_BadOption"><b>The value provided (https://uts.nlm.nih.gov/uts/umls::C99269) is not in the options value set in the questionnaire</b></td> </tr> </table> <hr/> @@ -694,10 +694,10 @@ <h2><a href="StructureDefinition-study-group.html">fsh-generated/resources/Struc <td><b>Path</b></td><td><b>Severity</b></td><td><b>Message</b></td> </tr> <tr style="background-color: #ffcccc"> - <td><b>StructureDefinition.snapshot.element[13].pattern.ofType(CodeableConcept).coding[0]</b></td><td><b>error</b></td><td><b>Local Error: Resolved system http://snomed.info/sct, but the definition is not complete. Server Error: Unable to find code 44807982 in http://snomed.info/sct (version http://snomed.info/sct/900000000000207008/version/20220731); The code "44807982" is not valid in the system http://snomed.info/sct; The code provided (http://snomed.info/sct#44807982) is not valid in the value set 'All codes known to the system' (from http://tx.fhir.org/r4) for 'http://snomed.info/sct#44807982'</b> (<a href="qa-tx.html#l17">see Tx log</a>)</td> + <td><b>StructureDefinition.snapshot.element[13].pattern.ofType(CodeableConcept).coding[0] (l1/c42155)</b></td><td><b>error</b></td><td><b>Local Error: Resolved system http://snomed.info/sct, but the definition is not complete. Server Error: Unable to find code 44807982 in http://snomed.info/sct (version http://snomed.info/sct/900000000000207008/version/20220731); The code "44807982" is not valid in the system http://snomed.info/sct; The code provided (http://snomed.info/sct#44807982) is not valid in the value set 'All codes known to the system' (from http://tx.fhir.org/r4) for 'http://snomed.info/sct#44807982'</b> (<a href="qa-tx.html#l17">see Tx log</a>)</td> </tr> <tr style="background-color: #ffcccc"> - <td><b>StructureDefinition.differential.element[3].pattern.ofType(CodeableConcept).coding[0]</b></td><td><b>error</b></td><td><b>Local Error: Resolved system http://snomed.info/sct, but the definition is not complete. Server Error: Unable to find code 44807982 in http://snomed.info/sct (version http://snomed.info/sct/900000000000207008/version/20220731); The code "44807982" is not valid in the system http://snomed.info/sct; The code provided (http://snomed.info/sct#44807982) is not valid in the value set 'All codes known to the system' (from http://tx.fhir.org/r4) for 'http://snomed.info/sct#44807982'</b> (<a href="qa-tx.html#l17">see Tx log</a>)</td> + <td><b>StructureDefinition.differential.element[3].pattern.ofType(CodeableConcept).coding[0] (l1/c63183)</b></td><td><b>error</b></td><td><b>Local Error: Resolved system http://snomed.info/sct, but the definition is not complete. Server Error: Unable to find code 44807982 in http://snomed.info/sct (version http://snomed.info/sct/900000000000207008/version/20220731); The code "44807982" is not valid in the system http://snomed.info/sct; The code provided (http://snomed.info/sct#44807982) is not valid in the value set 'All codes known to the system' (from http://tx.fhir.org/r4) for 'http://snomed.info/sct#44807982'</b> (<a href="qa-tx.html#l17">see Tx log</a>)</td> </tr> </table> <hr/> @@ -710,10 +710,10 @@ <h2><a href="StructureDefinition-study-summary.html">fsh-generated/resources/Str <td><b>Path</b></td><td><b>Severity</b></td><td><b>Message</b></td> </tr> <tr style="background-color: #ffffe6"> - <td><b>StructureDefinition.snapshot.element[17].pattern.ofType(Coding)</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> + <td><b>StructureDefinition.snapshot.element[17].pattern.ofType(Coding) (l1/c46857)</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> </tr> <tr style="background-color: #ffffe6"> - <td><b>StructureDefinition.differential.element[1].pattern.ofType(Coding)</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> + <td><b>StructureDefinition.differential.element[1].pattern.ofType(Coding) (l1/c101783)</b></td><td><b>information</b></td><td title="Terminology_TX_System_NotKnown"><b>Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated</b></td> </tr> <tr style="background-color: #ffffe6"> <td><b>StructureDefinition.snapshot.element[17].pattern.ofType(Coding)</b></td><td><b>information</b></td><td title=""><b>The repeating element has a pattern. The pattern will apply to all the repeats (this has not been clear to all users)</b></td> @@ -732,7 +732,7 @@ <h2><a href="ValueSet-condition-inheritance-vs.html">fsh-generated/resources/Val <td><b>Path</b></td><td><b>Severity</b></td><td><b>Message</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>ValueSet</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> + <td><b>ValueSet (l1/c1128)</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> </tr> </table> <hr/> @@ -748,7 +748,7 @@ <h2><a href="ValueSet-datatable-mappings-valueset-1.html">fsh-generated/resource <td><b>ValueSet.compose[0].include[0]</b></td><td><b>warning</b></td><td title=""><b>Unknown System 'https://uts.nlm.nih.gov/uts/umls' specified, so Concepts and Filters can't be checked (Details: Local Error: Unable to resolve system https://uts.nlm.nih.gov/uts/umls. Server Error: The code system 'https://uts.nlm.nih.gov/uts/umls' is not known (encountered paired with code = 'C2348584'); The code provided (https://uts.nlm.nih.gov/uts/umls#C2348584) is not valid in the value set 'All codes known to the system' (from http://tx.fhir.org/r4))</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>ValueSet</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> + <td><b>ValueSet (l1/c3365)</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> </tr> <tr style="background-color: #ffebcc"> <td><b>ValueSet.where(id = 'datatable-mappings-valueset-1')</b></td><td><b>warning</b></td><td><b>Error from server: Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls</b> (<a href="qa-tx.html#l50">see Tx log</a>)</td> @@ -764,7 +764,7 @@ <h2><a href="ValueSet-datatable-valueset-1.html">fsh-generated/resources/ValueSe <td><b>Path</b></td><td><b>Severity</b></td><td><b>Message</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>ValueSet</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> + <td><b>ValueSet (l1/c1040)</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> </tr> </table> <hr/> @@ -780,7 +780,7 @@ <h2><a href="ValueSet-example-study-data-dictionary-case-control-vs-1.html">fsh- <td><b>ValueSet.compose[0].include[0]</b></td><td><b>warning</b></td><td title=""><b>Unknown System 'https://uts.nlm.nih.gov/uts/umls' specified, so Concepts and Filters can't be checked (Details: Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated)</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>ValueSet</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> + <td><b>ValueSet (l1/c1237)</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> </tr> <tr style="background-color: #ffebcc"> <td><b>ValueSet.where(id = 'example-study-data-dictionary-case-control-vs-1')</b></td><td><b>warning</b></td><td><b>Error from server: Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls</b> (<a href="qa-tx.html#l52">see Tx log</a>)</td> @@ -796,7 +796,7 @@ <h2><a href="ValueSet-ncpi-vs.html">fsh-generated/resources/ValueSet-ncpi-vs.jso <td><b>Path</b></td><td><b>Severity</b></td><td><b>Message</b></td> </tr> <tr style="background-color: #ffebcc"> - <td><b>ValueSet</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> + <td><b>ValueSet (l1/c1173)</b></td><td><b>warning</b></td><td title="VALUESET_SHAREABLE_MISSING"><b>The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile</b></td> </tr> </table> <hr/> diff --git a/qa.txt b/qa.txt index f3842b04..62451439 100644 --- a/qa.txt +++ b/qa.txt @@ -2,8 +2,8 @@ ========================================= err = 22, warn = 50, info = 26 -IG Publisher Version: 1.2.19 -Generated Mon Nov 28 21:09:27 UTC 2022. FHIR version 4.0.1 for NCPI-FHIR-Implementation-Guide#0.2.0 (canonical = https://nih-ncpi.github.io/ncpi-fhir-ig) +IG Publisher Version: 1.2.22 +Generated Fri Dec 09 17:32:06 UTC 2022. FHIR version 4.0.1 for NCPI-FHIR-Implementation-Guide#0.2.0 (canonical = https://nih-ncpi.github.io/ncpi-fhir-ig) Build Errors : 15 / 4 / 0 /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ActivityDefinition-example-study-data-dictionary-table-1 : 0 / 1 / 2 /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ConditionInheritanceMode : 0 / 2 / 2 @@ -100,9 +100,9 @@ ERROR: /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/output/Questionnaire-example- ERROR: /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/output/ValueSet-datatable-mappings-valueset-1.html#/html/body/div/div/div/div/div/div/ul/li/table/tr/td/a at Line 322, column 1106: The link 'CodeSystem-hpo.html#hpo-HP.580010772' for "HP:0010772" cannot be resolved (valid targets: 1893 targets) ERROR: /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/output/ValueSet-datatable-mappings-valueset-1.html#/html/body/div/div/div/div/div/div/ul/li/table/tr/td/a at Line 322, column 1466: The link 'CodeSystem-mondo.html#mondo-0017705' for "0017705" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, segment-breadcrumb]) ERROR: /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/output/ValueSet-datatable-mappings-valueset-1.html#/html/body/div/div/div/div/div/div/ul/li/table/tr/td/a at Line 322, column 1592: The link 'CodeSystem-mondo.html#mondo-0007130' for "0007130" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, segment-breadcrumb]) -ERROR: /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 326, column 3412: The link 'CodeSystem-hpo.html#hpo-HP.580010772' for "HP:0010772" cannot be resolved (valid targets: 1893 targets) -ERROR: /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 326, column 3511: The link 'CodeSystem-mondo.html#mondo-MONDO.580017705' for "MONDO:0017705" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, segment-breadcrumb]) -ERROR: /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 326, column 3620: The link 'CodeSystem-mondo.html#mondo-MONDO.580007130' for "MONDO:0007130" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, segment-breadcrumb]) +ERROR: /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 326, column 3418: The link 'CodeSystem-hpo.html#hpo-HP.580010772' for "HP:0010772" cannot be resolved (valid targets: 1893 targets) +ERROR: /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 326, column 3517: The link 'CodeSystem-mondo.html#mondo-MONDO.580017705' for "MONDO:0017705" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, segment-breadcrumb]) +ERROR: /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 326, column 3626: The link 'CodeSystem-mondo.html#mondo-MONDO.580007130' for "MONDO:0007130" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, segment-breadcrumb]) ERROR: /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/output/example_raw_data.html#/html/body/div/div/div/div/div/table/tbody/tr/td/a at Line 256, column 114: The link 'CodeSystem-example-study-dd-dataset-codesystem-1.html' for "dataset CodeSystem" cannot be resolved ERROR: /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/output/example_raw_data.html#/html/body/div/div/div/div/div/p/a at Line 266, column 329: The link 'ObservationDefinition-example-study-dd-variable-1-1.json.html' for "subjectid" cannot be resolved ERROR: /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/output/example_raw_data.html#/html/body/div/div/div/div/div/p/a at Line 266, column 475: The link 'ObservationDefinition-example-study-dd-variable-1-2.json.html' for "gender" cannot be resolved diff --git a/qa.xml b/qa.xml index 56478b3f..3f2cad39 100644 --- a/qa.xml +++ b/qa.xml @@ -1 +1 @@ -<?xml version="1.0" encoding="UTF-8"?><Bundle xmlns="http://hl7.org/fhir"><type value="collection"/><entry><resource><OperationOutcome><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="warning"/><code value="not-found"/><details><text value="The HTML fragment 'ip-statements.xhtml' is not included anywhere in the produced implementation guide"/></details><expression value="1"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="warning"/><code value="not-found"/><details><text value="An HTML fragment from the set [cross-version-analysis.xhtml, cross-version-analysis-inline.xhtml] is not included anywhere in the produced implementation guide"/></details><expression value="2"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="warning"/><code value="not-found"/><details><text value="An HTML fragment from the set [dependency-table.xhtml, dependency-table-short.xhtml] is not included anywhere in the produced implementation guide"/></details><expression value="3"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="warning"/><code value="not-found"/><details><text value="The HTML fragment 'globals-table.xhtml' is not included anywhere in the produced implementation guide"/></details><expression value="4"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ActivityDefinition-example-study-data-dictionary-table-1"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_TX_System_NotKnown"/></extension><severity value="information"/><code value="unknown"/><details><text value="Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated"/></details><expression value="ActivityDefinition/example-study-data-dictionary-table-1: ActivityDefinition.topic[0].coding[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_PassThrough_TX_Message"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="Display Name for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1#demographics should be one of 0 choices from '', not 'Demographic data' for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1#demographics'"/></details><expression value="ActivityDefinition/example-study-data-dictionary-table-1: ActivityDefinition.code.coding[0]"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ConditionInheritanceMode"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="business-rule"/><details><text value="CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly"/></details><expression value="CodeSystem/ConditionInheritanceMode: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/ConditionInheritanceMode: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/ConditionInheritanceMode: CodeSystem"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-example-study-data-dictionary-dataset-codesystem-1"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="business-rule"/><details><text value="CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly"/></details><expression value="CodeSystem/example-study-data-dictionary-dataset-codesystem-1: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/example-study-data-dictionary-dataset-codesystem-1: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/example-study-data-dictionary-dataset-codesystem-1: CodeSystem"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-example-study-data-dictionary-datatable-codesystem-1"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="business-rule"/><details><text value="CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly"/></details><expression value="CodeSystem/example-study-data-dictionary-datatable-codesystem-1: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/example-study-data-dictionary-datatable-codesystem-1: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/example-study-data-dictionary-datatable-codesystem-1: CodeSystem"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-hpo"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="ProfileValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="RESOURCE_CANONICAL_MISMATCH"/></extension><severity value="error"/><code value="structure"/><details><text value="Conformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-hpo.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/hpo) does not match the URL (http://purl.obolibrary.org/obo/hp.owl)"/></details><expression value="CodeSystem.where(url = 'http://purl.obolibrary.org/obo/hp.owl')"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="business-rule"/><details><text value="CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly"/></details><expression value="CodeSystem/hpo: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="business-rule"/><details><text value="Review the All Codes Value Set - incomplete CodeSystems generally should not have an all codes value set specified"/></details><expression value="CodeSystem/hpo: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/hpo: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="error"/><code value="business-rule"/><details><text value="URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/hpo vs http://purl.obolibrary.org/obo/hp.owl"/></details><expression value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-hpo"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-loinc-answers"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="ProfileValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="RESOURCE_CANONICAL_MISMATCH"/></extension><severity value="error"/><code value="structure"/><details><text value="Conformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-loinc-answers.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/loinc-answers) does not match the URL (ncpi:loinc-answers)"/></details><expression value="CodeSystem.where(url = 'ncpi:loinc-answers')"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="error"/><code value="business-rule"/><details><text value="URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/loinc-answers vs ncpi:loinc-answers"/></details><expression value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-loinc-answers"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-mondo"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="ProfileValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="RESOURCE_CANONICAL_MISMATCH"/></extension><severity value="error"/><code value="structure"/><details><text value="Conformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-mondo.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/mondo) does not match the URL (http://purl.obolibrary.org/obo/mondo.owl)"/></details><expression value="CodeSystem.where(url = 'http://purl.obolibrary.org/obo/mondo.owl')"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="error"/><code value="business-rule"/><details><text value="URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/mondo vs http://purl.obolibrary.org/obo/mondo.owl"/></details><expression value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-mondo"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncit"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="ProfileValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="RESOURCE_CANONICAL_MISMATCH"/></extension><severity value="error"/><code value="structure"/><details><text value="Conformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncit.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncit) does not match the URL (http://purl.obolibrary.org/obo/ncit.owl)"/></details><expression value="CodeSystem.where(url = 'http://purl.obolibrary.org/obo/ncit.owl')"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="error"/><code value="business-rule"/><details><text value="URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncit vs http://purl.obolibrary.org/obo/ncit.owl"/></details><expression value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncit"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncpi"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="business-rule"/><details><text value="CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly"/></details><expression value="CodeSystem/ncpi: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/ncpi: CodeSystem"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncpi-data-types"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="business-rule"/><details><text value="CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly"/></details><expression value="CodeSystem/ncpi-data-types: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/ncpi-data-types: CodeSystem"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-omim"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="ProfileValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="RESOURCE_CANONICAL_MISMATCH"/></extension><severity value="error"/><code value="structure"/><details><text value="Conformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-omim.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/omim) does not match the URL (https://omim.org/)"/></details><expression value="CodeSystem.where(url = 'https://omim.org/')"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="error"/><code value="business-rule"/><details><text value="URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/omim vs https://omim.org/"/></details><expression value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-omim"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-tbd-codes"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="ProfileValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="RESOURCE_CANONICAL_MISMATCH"/></extension><severity value="error"/><code value="structure"/><details><text value="Conformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-tbd-codes.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/tbd-codes) does not match the URL (http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes)"/></details><expression value="CodeSystem.where(url = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes')"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="warning"/><code value="business-rule"/><details><text value="HL7 Defined CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly"/></details><expression value="CodeSystem/tbd-codes: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING_HL7"/></extension><severity value="error"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not found. HL7 Published code systems SHALL conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/tbd-codes: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="error"/><code value="business-rule"/><details><text value="URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/tbd-codes vs http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes"/></details><expression value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-tbd-codes"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-v3-hgvs"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="ProfileValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="RESOURCE_CANONICAL_MISMATCH"/></extension><severity value="error"/><code value="structure"/><details><text value="Conformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-v3-hgvs.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/v3-hgvs) does not match the URL (http://varnomen.hgvs.org)"/></details><expression value="CodeSystem.where(url = 'http://varnomen.hgvs.org')"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="business-rule"/><details><text value="CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly"/></details><expression value="CodeSystem/v3-hgvs: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/v3-hgvs: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="error"/><code value="business-rule"/><details><text value="URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/v3-hgvs vs http://varnomen.hgvs.org"/></details><expression value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-v3-hgvs"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Condition-disease-example-1"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="42"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="8"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_PassThrough_TX_Message"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="Unknown Code http://purl.obolibrary.org/obo/ncit.owl#NCIT:Neuroblastoma in http://purl.obolibrary.org/obo/ncit.owl - note that the code system is labelled as a fragment, so the code may be valid in some other fragment for 'http://purl.obolibrary.org/obo/ncit.owl#NCIT:Neuroblastoma'"/></details><expression value="Condition/disease-example-1: Condition.code.coding[0]"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Condition-phenotype-example-1"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/DiagnosticReport-diagnostic-report-1"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/DocumentReference-drs-document-reference-example-1"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/DocumentReference-research-document-reference-example-1"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Encounter-example-encounter-study-01-patient-01"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Group-example-summary-group-1"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Group-ncpi-research-study-01-group-01-main"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ImplementationGuide-NCPI-FHIR-Implementation-Guide"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Type_Specific_Checks_DT_String_WS"/></extension><severity value="warning"/><code value="structure"/><details><text value="value should not start or finish with whitespace 'A...Task '"/></details><expression value="ImplementationGuide/NCPI-FHIR-Implementation-Guide: ImplementationGuide.definition.resource[7].description"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Type_Specific_Checks_DT_String_WS"/></extension><severity value="warning"/><code value="structure"/><details><text value="value should not start or finish with whitespace 'Grouping...etc. '"/></details><expression value="ImplementationGuide/NCPI-FHIR-Implementation-Guide: ImplementationGuide.definition.resource[12].description"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-anvil-summary-cmg"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="7"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="8"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_PassThrough_TX_Message"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="Display Name for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Summary should be 'Summary Data', not 'Variable Summary' for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Summary'"/></details><expression value="Observation/anvil-summary-cmg: Observation.code.coding[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="23"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="12"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="TERMINOLOGY_TX_SYSTEM_NO_CODE"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="A code with no system has no defined meaning. A system should be provided"/></details><expression value="Observation/anvil-summary-cmg: Observation.component[0].code.coding[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="34"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="12"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_PassThrough_TX_Message"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="Display Name for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#SampleCount should be 'Number of samples that are part of this study', not 'Number of Samples' for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#SampleCount'"/></details><expression value="Observation/anvil-summary-cmg: Observation.component[1].code.coding[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="46"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="12"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_PassThrough_TX_Message"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="Display Name for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Participant should be 'Number of participants that are part of this study', not 'Number of Participants' for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Participant'"/></details><expression value="Observation/anvil-summary-cmg: Observation.component[2].code.coding[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="58"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="12"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="TERMINOLOGY_TX_SYSTEM_NO_CODE"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="A code with no system has no defined meaning. 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value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Reference_REF_CantResolve"/></extension><severity value="error"/><code value="structure"/><details><text value="Unable to resolve resource with reference 'example-sum-patient-1'"/></details><expression value="QuestionnaireResponse/example-questionnaire-demographics-response-1: QuestionnaireResponse.subject"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="48"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="30"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_TX_System_NotKnown"/></extension><severity value="information"/><code value="unknown"/><details><text value="Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated"/></details><expression value="QuestionnaireResponse/example-questionnaire-demographics-response-1: QuestionnaireResponse.item[3].answer[0].value.ofType(Coding)"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="25"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="10"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Questionnaire_QR_Item_StringNoOptions"/></extension><severity value="information"/><code value="structure"/><details><text value="Cannot validate string answer option because no option list is provided"/></details><expression value="QuestionnaireResponse/example-questionnaire-demographics-response-1: QuestionnaireResponse.item[1].answer[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="48"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="30"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Questionnaire_QR_Item_BadOption"/></extension><severity value="error"/><code value="code-invalid"/><details><text value="The value provided (https://uts.nlm.nih.gov/uts/umls::C99269) is not in the options value set in the questionnaire"/></details><expression value="QuestionnaireResponse/example-questionnaire-demographics-response-1: QuestionnaireResponse.item[3].answer[0]"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-ncpi-research-study-01"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="24"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="8"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="TERMINOLOGY_TX_SYSTEM_NO_CODE"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="A code with no system has no defined meaning. A system should be provided"/></details><expression value="ResearchStudy/ncpi-research-study-01: ResearchStudy.primaryPurposeType.coding[0]"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-research-study-cmg"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="8"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="8"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="TERMINOLOGY_TX_SYSTEM_NO_CODE"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="A code with no system has no defined meaning. A system should be provided"/></details><expression value="ResearchStudy/research-study-cmg: ResearchStudy.primaryPurposeType.coding[0]"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-research-study-example-1"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-research-study-phs000711"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="8"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="8"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="TERMINOLOGY_TX_SYSTEM_NO_CODE"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="A code with no system has no defined meaning. A system should be provided"/></details><expression value="ResearchStudy/research-study-phs000711: ResearchStudy.primaryPurposeType.coding[0]"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchSubject-research-subject-example-1"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchSubject-research-subject-example-2"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchSubject-research-subject-example-3"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchSubject-research-subject-study-01-patient-01"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchSubject-research-subject-study-01-patient-02"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Specimen-ncpi-research-study-01-specimen-01"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="7"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="8"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_PassThrough_TX_Message"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="Unknown Code http://purl.obolibrary.org/obo/ncit.owl#C17610 in http://purl.obolibrary.org/obo/ncit.owl - note that the code system is labelled as a fragment, so the code may be valid in some other fragment for 'http://purl.obolibrary.org/obo/ncit.owl#C17610'"/></details><expression value="Specimen/ncpi-research-study-01-specimen-01: Specimen.type.coding[0]"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Specimen-specimen-example-1"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-disease"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-family-relationship"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-drs-attachment"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-drs-document-reference"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-research-document-reference"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-research-study"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="exception"/><details><text value="The repeating element has a pattern. The pattern will apply to all the repeats (this has not been clear to all users)"/></details><expression value="StructureDefinition/ncpi-research-study: StructureDefinition.snapshot.element[19].pattern.ofType(Coding)"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-specimen-task"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-phenotype"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-raw-data-observation"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="warning"/><code value="business-rule"/><details><text value="The Implementation Guide contains no examples for this profile"/></details><expression value="StructureDefinition.where(url = 'https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/raw-data-observation')"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-data-dictionary-harmony"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-data-dictionary-table"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-data-dictionary-variable"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-group"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_PassThrough_TX_Message"/></extension><severity value="error"/><code value="code-invalid"/><details><text value="Local Error: Resolved system http://snomed.info/sct, but the definition is not complete. Server Error: Unable to find code 44807982 in http://snomed.info/sct (version http://snomed.info/sct/900000000000207008/version/20220731); The code "44807982" is not valid in the system http://snomed.info/sct; The code provided (http://snomed.info/sct#44807982) is not valid in the value set 'All codes known to the system' (from http://tx.fhir.org/r4) for 'http://snomed.info/sct#44807982'"/></details><expression value="StructureDefinition/study-group: StructureDefinition.snapshot.element[13].pattern.ofType(CodeableConcept).coding[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_PassThrough_TX_Message"/></extension><severity value="error"/><code value="code-invalid"/><details><text value="Local Error: Resolved system http://snomed.info/sct, but the definition is not complete. Server Error: Unable to find code 44807982 in http://snomed.info/sct (version http://snomed.info/sct/900000000000207008/version/20220731); The code "44807982" is not valid in the system http://snomed.info/sct; The code provided (http://snomed.info/sct#44807982) is not valid in the value set 'All codes known to the system' (from http://tx.fhir.org/r4) for 'http://snomed.info/sct#44807982'"/></details><expression value="StructureDefinition/study-group: StructureDefinition.differential.element[3].pattern.ofType(CodeableConcept).coding[0]"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-summary"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_TX_System_NotKnown"/></extension><severity value="information"/><code value="unknown"/><details><text value="Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated"/></details><expression value="StructureDefinition/study-summary: StructureDefinition.snapshot.element[17].pattern.ofType(Coding)"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_TX_System_NotKnown"/></extension><severity value="information"/><code value="unknown"/><details><text value="Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated"/></details><expression value="StructureDefinition/study-summary: StructureDefinition.differential.element[1].pattern.ofType(Coding)"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="exception"/><details><text value="The repeating element has a pattern. The pattern will apply to all the repeats (this has not been clear to all users)"/></details><expression value="StructureDefinition/study-summary: StructureDefinition.snapshot.element[17].pattern.ofType(Coding)"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="warning"/><code value="business-rule"/><details><text value="The Implementation Guide contains no examples for this profile"/></details><expression value="StructureDefinition.where(url = 'https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-summary')"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-variable-summary"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_TX_System_NotKnown"/></extension><severity value="information"/><code value="unknown"/><details><text value="Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated"/></details><expression value="StructureDefinition/study-variable-summary: StructureDefinition.snapshot.element[17].pattern.ofType(Coding)"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_TX_System_NotKnown"/></extension><severity value="information"/><code value="unknown"/><details><text value="Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated"/></details><expression value="StructureDefinition/study-variable-summary: StructureDefinition.differential.element[1].pattern.ofType(Coding)"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="exception"/><details><text value="The repeating element has a pattern. The pattern will apply to all the repeats (this has not been clear to all users)"/></details><expression value="StructureDefinition/study-variable-summary: StructureDefinition.snapshot.element[17].pattern.ofType(Coding)"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-supporting-info"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Task-task-example-1"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Task-task-example-2"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-condition-inheritance-vs"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="VALUESET_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile"/></details><expression value="ValueSet/condition-inheritance-vs: ValueSet"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-datatable-mappings-valueset-1"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="warning"/><code value="business-rule"/><details><text value="Unknown System 'https://uts.nlm.nih.gov/uts/umls' specified, so Concepts and Filters can't be checked (Details: Local Error: Unable to resolve system https://uts.nlm.nih.gov/uts/umls. Server Error: The code system 'https://uts.nlm.nih.gov/uts/umls' is not known (encountered paired with code = 'C2348584'); The code provided (https://uts.nlm.nih.gov/uts/umls#C2348584) is not valid in the value set 'All codes known to the system' (from http://tx.fhir.org/r4))"/></details><expression value="ValueSet/datatable-mappings-valueset-1: ValueSet.compose[0].include[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="VALUESET_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile"/></details><expression value="ValueSet/datatable-mappings-valueset-1: ValueSet"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><severity value="warning"/><code value="exception"/><details><text value="Error from server: Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls"/></details><expression value="ValueSet.where(id = 'datatable-mappings-valueset-1')"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-datatable-valueset-1"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="VALUESET_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile"/></details><expression value="ValueSet/datatable-valueset-1: ValueSet"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-disease-codes"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-example-study-data-dictionary-case-control-vs-1"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="warning"/><code value="business-rule"/><details><text value="Unknown System 'https://uts.nlm.nih.gov/uts/umls' specified, so Concepts and Filters can't be checked (Details: Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated)"/></details><expression value="ValueSet/example-study-data-dictionary-case-control-vs-1: ValueSet.compose[0].include[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="VALUESET_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile"/></details><expression value="ValueSet/example-study-data-dictionary-case-control-vs-1: ValueSet"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><severity value="warning"/><code value="exception"/><details><text value="Error from server: Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls"/></details><expression value="ValueSet.where(id = 'example-study-data-dictionary-case-control-vs-1')"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-loinc-answers"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-ncpi-vs"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="VALUESET_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile"/></details><expression value="ValueSet/ncpi-vs: ValueSet"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-phenotype-codes"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-tbd-codes"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="ProfileValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="RESOURCE_CANONICAL_MISMATCH"/></extension><severity value="error"/><code value="structure"/><details><text value="Conformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-tbd-codes.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/tbd-codes) does not match the URL (http://hl7.org/fhir/uv/genomics-reporting/ValueSet/tbd-codes)"/></details><expression value="ValueSet.where(url = 'http://hl7.org/fhir/uv/genomics-reporting/ValueSet/tbd-codes')"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="error"/><code value="business-rule"/><details><text value="URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/tbd-codes vs http://hl7.org/fhir/uv/genomics-reporting/ValueSet/tbd-codes"/></details><expression value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-tbd-codes"/></issue></OperationOutcome></resource></entry></Bundle> \ No newline at end of file +<?xml version="1.0" encoding="UTF-8"?><Bundle xmlns="http://hl7.org/fhir"><type value="collection"/><entry><resource><OperationOutcome><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="warning"/><code value="not-found"/><details><text value="The HTML fragment 'ip-statements.xhtml' is not included anywhere in the produced implementation guide"/></details><expression value="1"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="warning"/><code value="not-found"/><details><text value="An HTML fragment from the set [cross-version-analysis.xhtml, cross-version-analysis-inline.xhtml] is not included anywhere in the produced implementation guide"/></details><expression value="2"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="warning"/><code value="not-found"/><details><text value="An HTML fragment from the set [dependency-table.xhtml, dependency-table-short.xhtml] is not included anywhere in the produced implementation guide"/></details><expression value="3"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="warning"/><code value="not-found"/><details><text value="The HTML fragment 'globals-table.xhtml' is not included anywhere in the produced implementation guide"/></details><expression value="4"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ActivityDefinition-example-study-data-dictionary-table-1"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="725"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_TX_System_NotKnown"/></extension><severity value="information"/><code value="unknown"/><details><text value="Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated"/></details><expression value="ActivityDefinition/example-study-data-dictionary-table-1: ActivityDefinition.topic[0].coding[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="912"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_PassThrough_TX_Message"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="Display Name for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1#demographics should be one of 0 choices from '', not 'Demographic data' for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1#demographics'"/></details><expression value="ActivityDefinition/example-study-data-dictionary-table-1: ActivityDefinition.code.coding[0]"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ConditionInheritanceMode"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="business-rule"/><details><text value="CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly"/></details><expression value="CodeSystem/ConditionInheritanceMode: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="6945"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/ConditionInheritanceMode: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="6945"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/ConditionInheritanceMode: CodeSystem"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-example-study-data-dictionary-dataset-codesystem-1"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="business-rule"/><details><text value="CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly"/></details><expression value="CodeSystem/example-study-data-dictionary-dataset-codesystem-1: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="1255"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/example-study-data-dictionary-dataset-codesystem-1: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="1255"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/example-study-data-dictionary-dataset-codesystem-1: CodeSystem"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-example-study-data-dictionary-datatable-codesystem-1"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="business-rule"/><details><text value="CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly"/></details><expression value="CodeSystem/example-study-data-dictionary-datatable-codesystem-1: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="2302"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/example-study-data-dictionary-datatable-codesystem-1: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="2302"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/example-study-data-dictionary-datatable-codesystem-1: CodeSystem"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-hpo"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="ProfileValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="RESOURCE_CANONICAL_MISMATCH"/></extension><severity value="error"/><code value="structure"/><details><text value="Conformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-hpo.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/hpo) does not match the URL (http://purl.obolibrary.org/obo/hp.owl)"/></details><expression value="CodeSystem.where(url = 'http://purl.obolibrary.org/obo/hp.owl')"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="business-rule"/><details><text value="CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly"/></details><expression value="CodeSystem/hpo: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="business-rule"/><details><text value="Review the All Codes Value Set - incomplete CodeSystems generally should not have an all codes value set specified"/></details><expression value="CodeSystem/hpo: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="336911"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/hpo: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="error"/><code value="business-rule"/><details><text value="URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/hpo vs http://purl.obolibrary.org/obo/hp.owl"/></details><expression value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-hpo"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-loinc-answers"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="ProfileValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="RESOURCE_CANONICAL_MISMATCH"/></extension><severity value="error"/><code value="structure"/><details><text value="Conformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-loinc-answers.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/loinc-answers) does not match the URL (ncpi:loinc-answers)"/></details><expression value="CodeSystem.where(url = 'ncpi:loinc-answers')"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="error"/><code value="business-rule"/><details><text value="URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/loinc-answers vs ncpi:loinc-answers"/></details><expression value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-loinc-answers"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-mondo"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="ProfileValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="RESOURCE_CANONICAL_MISMATCH"/></extension><severity value="error"/><code value="structure"/><details><text value="Conformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-mondo.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/mondo) does not match the URL (http://purl.obolibrary.org/obo/mondo.owl)"/></details><expression value="CodeSystem.where(url = 'http://purl.obolibrary.org/obo/mondo.owl')"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="error"/><code value="business-rule"/><details><text value="URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/mondo vs http://purl.obolibrary.org/obo/mondo.owl"/></details><expression value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-mondo"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncit"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="ProfileValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="RESOURCE_CANONICAL_MISMATCH"/></extension><severity value="error"/><code value="structure"/><details><text value="Conformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncit.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncit) does not match the URL (http://purl.obolibrary.org/obo/ncit.owl)"/></details><expression value="CodeSystem.where(url = 'http://purl.obolibrary.org/obo/ncit.owl')"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="error"/><code value="business-rule"/><details><text value="URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncit vs http://purl.obolibrary.org/obo/ncit.owl"/></details><expression value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncit"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncpi"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="business-rule"/><details><text value="CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly"/></details><expression value="CodeSystem/ncpi: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="4550"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/ncpi: CodeSystem"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncpi-data-types"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="business-rule"/><details><text value="CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly"/></details><expression value="CodeSystem/ncpi-data-types: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="1529"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/ncpi-data-types: CodeSystem"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-omim"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="ProfileValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="RESOURCE_CANONICAL_MISMATCH"/></extension><severity value="error"/><code value="structure"/><details><text value="Conformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-omim.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/omim) does not match the URL (https://omim.org/)"/></details><expression value="CodeSystem.where(url = 'https://omim.org/')"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="error"/><code value="business-rule"/><details><text value="URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/omim vs https://omim.org/"/></details><expression value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-omim"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-tbd-codes"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="ProfileValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="RESOURCE_CANONICAL_MISMATCH"/></extension><severity value="error"/><code value="structure"/><details><text value="Conformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-tbd-codes.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/tbd-codes) does not match the URL (http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes)"/></details><expression value="CodeSystem.where(url = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes')"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="warning"/><code value="business-rule"/><details><text value="HL7 Defined CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly"/></details><expression value="CodeSystem/tbd-codes: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="8451"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING_HL7"/></extension><severity value="error"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not found. HL7 Published code systems SHALL conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/tbd-codes: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="error"/><code value="business-rule"/><details><text value="URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/tbd-codes vs http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes"/></details><expression value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-tbd-codes"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-v3-hgvs"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="ProfileValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="RESOURCE_CANONICAL_MISMATCH"/></extension><severity value="error"/><code value="structure"/><details><text value="Conformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-v3-hgvs.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/v3-hgvs) does not match the URL (http://varnomen.hgvs.org)"/></details><expression value="CodeSystem.where(url = 'http://varnomen.hgvs.org')"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="business-rule"/><details><text value="CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly"/></details><expression value="CodeSystem/v3-hgvs: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="11769"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="CODESYSTEM_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile"/></details><expression value="CodeSystem/v3-hgvs: CodeSystem"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="Publisher"/></extension><severity value="error"/><code value="business-rule"/><details><text value="URL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/v3-hgvs vs http://varnomen.hgvs.org"/></details><expression value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-v3-hgvs"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Condition-disease-example-1"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="42"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="8"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_PassThrough_TX_Message"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="Unknown Code http://purl.obolibrary.org/obo/ncit.owl#NCIT:Neuroblastoma in http://purl.obolibrary.org/obo/ncit.owl - note that the code system is labelled as a fragment, so the code may be valid in some other fragment for 'http://purl.obolibrary.org/obo/ncit.owl#NCIT:Neuroblastoma'"/></details><expression value="Condition/disease-example-1: Condition.code.coding[0]"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Condition-phenotype-example-1"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/DiagnosticReport-diagnostic-report-1"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/DocumentReference-drs-document-reference-example-1"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/DocumentReference-research-document-reference-example-1"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Encounter-example-encounter-study-01-patient-01"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Group-example-summary-group-1"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Group-ncpi-research-study-01-group-01-main"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ImplementationGuide-NCPI-FHIR-Implementation-Guide"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="13013"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Type_Specific_Checks_DT_String_WS"/></extension><severity value="warning"/><code value="structure"/><details><text value="value should not start or finish with whitespace 'A...Task '"/></details><expression value="ImplementationGuide/NCPI-FHIR-Implementation-Guide: ImplementationGuide.definition.resource[7].description"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="15498"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Type_Specific_Checks_DT_String_WS"/></extension><severity value="warning"/><code value="structure"/><details><text value="value should not start or finish with whitespace 'Grouping...etc. '"/></details><expression value="ImplementationGuide/NCPI-FHIR-Implementation-Guide: ImplementationGuide.definition.resource[12].description"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-anvil-summary-cmg"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="7"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="8"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_PassThrough_TX_Message"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="Display Name for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Summary should be 'Summary Data', not 'Variable Summary' for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Summary'"/></details><expression value="Observation/anvil-summary-cmg: Observation.code.coding[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="23"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="12"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="TERMINOLOGY_TX_SYSTEM_NO_CODE"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="A code with no system has no defined meaning. A system should be provided"/></details><expression value="Observation/anvil-summary-cmg: Observation.component[0].code.coding[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="34"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="12"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_PassThrough_TX_Message"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="Display Name for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#SampleCount should be 'Number of samples that are part of this study', not 'Number of Samples' for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#SampleCount'"/></details><expression value="Observation/anvil-summary-cmg: Observation.component[1].code.coding[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="46"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="12"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_PassThrough_TX_Message"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="Display Name for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Participant should be 'Number of participants that are part of this study', not 'Number of Participants' for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Participant'"/></details><expression value="Observation/anvil-summary-cmg: Observation.component[2].code.coding[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="58"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="12"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="TERMINOLOGY_TX_SYSTEM_NO_CODE"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="A code with no system has no defined meaning. A system should be provided"/></details><expression value="Observation/anvil-summary-cmg: Observation.component[3].code.coding[0]"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-anvil-summary-phs000711"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="7"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="8"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_PassThrough_TX_Message"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="Display Name for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Summary should be 'Summary Data', not 'Variable Summary' for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Summary'"/></details><expression value="Observation/anvil-summary-phs000711: Observation.code.coding[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="23"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="12"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_PassThrough_TX_Message"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="Display Name for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#SampleCount should be 'Number of samples that are part of this study', not 'Number of Samples' for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#SampleCount'"/></details><expression value="Observation/anvil-summary-phs000711: Observation.component[0].code.coding[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="35"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="12"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_PassThrough_TX_Message"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="Display Name for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Participant should be 'Number of participants that are part of this study', not 'Number of Participants' for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Participant'"/></details><expression value="Observation/anvil-summary-phs000711: Observation.component[1].code.coding[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="47"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="12"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="TERMINOLOGY_TX_SYSTEM_NO_CODE"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="A code with no system has no defined meaning. A system should be provided"/></details><expression value="Observation/anvil-summary-phs000711: Observation.component[2].code.coding[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="58"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="12"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="TERMINOLOGY_TX_SYSTEM_NO_CODE"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="A code with no system has no defined meaning. A system should be provided"/></details><expression value="Observation/anvil-summary-phs000711: Observation.component[3].code.coding[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="69"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="12"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="TERMINOLOGY_TX_SYSTEM_NO_CODE"/></extension><severity value="warning"/><code value="code-invalid"/><details><text value="A code with no system has no defined meaning. 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note that the code system is labelled as a fragment, so the code may be valid in some other fragment for 'http://purl.obolibrary.org/obo/ncit.owl#C17610'"/></details><expression value="Specimen/ncpi-research-study-01-specimen-01: Specimen.type.coding[0]"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Specimen-specimen-example-1"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-disease"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-family-relationship"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-drs-attachment"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-drs-document-reference"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-research-document-reference"/></extension></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-research-study"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="exception"/><details><text value="The repeating element has a pattern. 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Server Error: Unable to find code 44807982 in http://snomed.info/sct (version http://snomed.info/sct/900000000000207008/version/20220731); The code "44807982" is not valid in the system http://snomed.info/sct; The code provided (http://snomed.info/sct#44807982) is not valid in the value set 'All codes known to the system' (from http://tx.fhir.org/r4) for 'http://snomed.info/sct#44807982'"/></details><expression value="StructureDefinition/study-group: StructureDefinition.snapshot.element[13].pattern.ofType(CodeableConcept).coding[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="63183"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_PassThrough_TX_Message"/></extension><severity value="error"/><code value="code-invalid"/><details><text value="Local Error: Resolved system http://snomed.info/sct, but the definition is not complete. Server Error: Unable to find code 44807982 in http://snomed.info/sct (version http://snomed.info/sct/900000000000207008/version/20220731); The code "44807982" is not valid in the system http://snomed.info/sct; The code provided (http://snomed.info/sct#44807982) is not valid in the value set 'All codes known to the system' (from http://tx.fhir.org/r4) for 'http://snomed.info/sct#44807982'"/></details><expression value="StructureDefinition/study-group: StructureDefinition.differential.element[3].pattern.ofType(CodeableConcept).coding[0]"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-summary"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="46857"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_TX_System_NotKnown"/></extension><severity value="information"/><code value="unknown"/><details><text value="Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated"/></details><expression value="StructureDefinition/study-summary: StructureDefinition.snapshot.element[17].pattern.ofType(Coding)"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="101783"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="Terminology_TX_System_NotKnown"/></extension><severity value="information"/><code value="unknown"/><details><text value="Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated"/></details><expression value="StructureDefinition/study-summary: StructureDefinition.differential.element[1].pattern.ofType(Coding)"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="information"/><code value="exception"/><details><text value="The repeating element has a pattern. 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Published value sets SHOULD conform to the ShareableValueSet profile"/></details><expression value="ValueSet/condition-inheritance-vs: ValueSet"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-datatable-mappings-valueset-1"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><severity value="warning"/><code value="business-rule"/><details><text value="Unknown System 'https://uts.nlm.nih.gov/uts/umls' specified, so Concepts and Filters can't be checked (Details: Local Error: Unable to resolve system https://uts.nlm.nih.gov/uts/umls. Server Error: The code system 'https://uts.nlm.nih.gov/uts/umls' is not known (encountered paired with code = 'C2348584'); The code provided (https://uts.nlm.nih.gov/uts/umls#C2348584) is not valid in the value set 'All codes known to the system' (from http://tx.fhir.org/r4))"/></details><expression value="ValueSet/datatable-mappings-valueset-1: ValueSet.compose[0].include[0]"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="3365"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="VALUESET_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile"/></details><expression value="ValueSet/datatable-mappings-valueset-1: ValueSet"/></issue><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="TerminologyEngine"/></extension><severity value="warning"/><code value="exception"/><details><text value="Error from server: Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls"/></details><expression value="ValueSet.where(id = 'datatable-mappings-valueset-1')"/></issue></OperationOutcome></resource></entry><entry><resource><OperationOutcome><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-file"><valueString value="/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-datatable-valueset-1"/></extension><issue><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-line"><valueInteger value="1"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-col"><valueInteger value="1040"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-issue-source"><valueCode value="InstanceValidator"/></extension><extension url="http://hl7.org/fhir/StructureDefinition/operationoutcome-message-id"><valueCode value="VALUESET_SHAREABLE_MISSING"/></extension><severity value="warning"/><code value="required"/><details><text value="The ShareableValueSet profile says that the experimental element is mandatory, but it is not present. 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Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/research_study.html b/research_study.html index 4cf3d15a..8953d5e1 100644 --- a/research_study.html +++ b/research_study.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -308,7 +308,7 @@ <h3 id="tbd">TBD</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/study_metadata.html b/study_metadata.html index 00c9b746..caf00913 100644 --- a/study_metadata.html +++ b/study_metadata.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -372,7 +372,7 @@ <h4 id="studyvariablesummary">StudyVariableSummary</h4> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/tabular.html b/tabular.html index 95552806..95abf044 100644 --- a/tabular.html +++ b/tabular.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -260,16 +260,16 @@ <h4 id="future-client-applications">Future Client Applications</h4> <p>While most of the ingestion of study data into FHIR today is being done at the study level, it is conceivable that in the near future there could be applications that can find these raw, tabular only sources and provide an interface for performing transformations on a more “ad-hoc” level. This could enable researchers with money to fund the partial lifting of these older studies into a more highly interoperable form that suits their own particular research needs.</p> <h3 id="conventions">Conventions</h3> -<p>For most study data, using a single Observation for each row of data is appropriate, given the presence of the data dictionary components for the study are also available in FHIR. For those studies where the original sources are questionnaires, then the FHIR Questionnaire resource is appropriate.</p> +<p>For most research data, the <a href="StructureDefinition-raw-data-observation.html">Raw Data Observation</a> profile should be used to represent individual rows from each of the dataset’s tables. These resources when coupled with the study metadata resources provide a comprehensive representation of the original data. For those studies where the original sources are questionnaires, then the FHIR Questionnaire and QuestionnaireResponse resources are appropriate.</p> -<p>For Observations, all non-missing variables from a single <em>row</em> of data is kept together as separate elements in the Observation’s component array. Each of those components have the variable’s data-dictionary code entry for the code, and the value[X] is represented as is defined in the data-dictionary’s type for that variable, with some exceptions. For numeric values where <em>Not a Number</em> is a real possibility, storing that as a valueCodeableConcept is appropriate as opposed to valueQuantity. The same applies for string values where normally a number would be expected, such as the case for values like “< 1 ml” where the instrument is unable to record the correct number, and instead, provides a meaningful substitute.</p> +<p>For <em>Raw Data Observation</em>, all non-missing variables from a single <em>row</em> of data is kept together as separate elements in the Observation’s component array. Each of those components have the variable’s data-dictionary code entry for the code, and the value[X] is represented as is defined in the data-dictionary’s type for that variable, with some exceptions. For numeric values where <em>Not a Number</em> is a real possibility, storing that as a valueCodeableConcept is appropriate as opposed to valueQuantity. The same applies for string values where normally a number would be expected, such as the case for values like “< 1 ml” where the instrument is unable to record the correct number, and instead, provides a meaningful substitute.</p> <p>For Questionnaires, the study should define a Questionnaire resource for each table. Each row in each of those tables is represented as a QuestionnaireResponse. Those responses link back to the appropriate Questionnaire by way of the response’s Questionnaire property and the individual values link back to the Questionnaire’s item using a common linkId.</p> <h3 id="relevant-artifacts">Relevant Artifacts</h3> -<p>In addition to reliance upon the terminologies from the Data Dictionary portions of the <a href="study_metadata.html">study metadata</a>, there are three resources that are primarily used to represent raw (source) data: <a href="https://hl7.org/fhir/observation.html">Observation</a> and <a href="https://hl7.org/fhir/questionnaire.html">Questionnaires</a> with <a href="https://hl7.org/fhir/questionnaireresponse.html">QuestionnaireResponses</a>.</p> +<p>In addition to reliance upon the terminologies from the Data Dictionary portions of the <a href="study_metadata.html">study metadata</a>, NCPI recommends the use of the profile, <a href="StructureDefinition-raw-data-observation.html">Raw Data Observation</a>. However, for those studies where a Questionnaire makes better sense, standard FHIR <a href="https://hl7.org/fhir/questionnaire.html">Questionnaires</a> with <a href="https://hl7.org/fhir/questionnaireresponse.html">QuestionnaireResponses</a> make good sense.</p> -<p>Out of the box, the Observations provide a bit more utility thanks to the searchability within those components.</p> +<p>Out of the box, the Observation, upon which the Raw Data Observation is based, provide a bit more utility thanks to the searchability within those components.</p> @@ -295,7 +295,7 @@ <h3 id="relevant-artifacts">Relevant Artifacts</h3> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/toc.html b/toc.html index 96005f55..94bfa279 100644 --- a/toc.html +++ b/toc.html @@ -150,7 +150,7 @@ <a href="childhood_cancer.html">Childhood Cancer</a> </li> <li> - <a href="using_source_data.html">Using "Source" Data</a> + <a href="use_case_tabular_data.html">Using "Source" Data</a> </li> <li> <a href="ehr.html">EHR Data</a> @@ -223,7 +223,7 @@ <h2>Table of Contents</h2> - <?xml version="1.0" encoding="UTF-8"?><div style="col-12"><table style="border:0px;font-size:11px;font-family:verdana;vertical-align:top;" cellpadding="0" border="0" cellspacing="0"><tbody><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img onClick="tableRowAction(this)" src="tbl_vjoin-open.png" alt="." style="background-color: inherit" class="hierarchy"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Table of Contents" href="toc.html">0 Table of Contents</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!""><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Home" href="index.html">1 Home</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!#"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Authors" href="authors.html">2 Authors</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!$"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Background" href="background.html">3 Background</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!%"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Childhood Cancer" href="childhood_cancer.html">4 Childhood Cancer</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!&"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Contact" href="contact.html">5 Contact</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!'"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Downloads" href="downloads.html">6 Downloads</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!("><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Ehr" href="ehr.html">7 Ehr</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!)"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example Raw Data" href="example_raw_data.html">8 Example Raw Data</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!*"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example Study Metadata" href="example_study_metadata.html">9 Example Study Metadata</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!+"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Family" href="family.html">10 Family</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!,"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="FHIR Basics" href="FHIR_Basics.html">11 FHIR Basics</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!-"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Files" href="files.html">12 Files</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!."><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Finding a Research Study" href="finding_a_research_study.html">13 Finding a Research Study</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!/"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Harmonization" href="harmonization.html">14 Harmonization</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!0"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Ig Versioning" href="ig_versioning.html">15 Ig Versioning</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!1"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Modular Ig" href="modular_ig.html">16 Modular Ig</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!2"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Ncpi" href="ncpi.html">17 Ncpi</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!3"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Participant" href="participant.html">18 Participant</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!4"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Performing a Genomic Analysis" href="performing_a_genomic_analysis.html">19 Performing a Genomic Analysis</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!5"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Rare Disease" href="rare_disease.html">20 Rare Disease</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!6"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Research Study" href="research_study.html">21 Research Study</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!7"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Structure Definition Study Data Dictionary Variable Note" href="StructureDefinition-study-data-dictionary-variable-note.html">22 Structure Definition Study Data Dictionary Variable Note</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!8"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Study Metadata" href="study_metadata.html">23 Study Metadata</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!9"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Tabular" href="tabular.html">24 Tabular</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!:"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Use Case Raw Data" href="use_case_raw_data.html">25 Use Case Raw Data</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!;"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Use Cases" href="use_cases.html">26 Use Cases</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!<"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Using Source Data" href="using_source_data.html">27 Using Source Data</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!="><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin_end.png"/><img onClick="tableRowAction(this)" src="tbl_vjoin-open.png" alt="." style="background-color: inherit" class="hierarchy"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Artifacts Summary" href="artifacts.html">28 Artifacts Summary</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=""><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="DRS Document Reference" href="StructureDefinition-ncpi-drs-document-reference.html">28.1 DRS Document Reference</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=#"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI Disease" href="StructureDefinition-disease.html">28.2 NCPI Disease</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=$"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI Family Relationship" href="StructureDefinition-family-relationship.html">28.3 NCPI Family Relationship</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=%"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI Research Study" href="StructureDefinition-ncpi-research-study.html">28.4 NCPI Research Study</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=&"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI Phenotype" href="StructureDefinition-phenotype.html">28.5 NCPI Phenotype</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!='"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Raw Data Observation" href="StructureDefinition-raw-data-observation.html">28.6 Raw Data Observation</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=("><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Research Document Reference" href="StructureDefinition-ncpi-research-document-reference.html">28.7 Research Document Reference</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=)"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Research Task" href="StructureDefinition-ncpi-specimen-task.html">28.8 Research Task</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=*"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI Data Dictionary Harmony" href="StructureDefinition-study-data-dictionary-harmony.html">28.9 NCPI Data Dictionary Harmony</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=+"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI Study Data Dictionary Data Table" href="StructureDefinition-study-data-dictionary-table.html">28.10 NCPI Study Data Dictionary Data Table</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=,"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI Study Data Dictionary Data Variable" href="StructureDefinition-study-data-dictionary-variable.html">28.11 NCPI Study Data Dictionary Data Variable</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=-"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI Study Group" href="StructureDefinition-study-group.html">28.12 NCPI Study Group</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=."><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Study Summary" href="StructureDefinition-study-summary.html">28.13 Study Summary</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=/"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Study Variable Summary" href="StructureDefinition-study-variable-summary.html">28.14 Study Variable Summary</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=0"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="DRS Attachment" href="StructureDefinition-ncpi-drs-attachment.html">28.15 DRS Attachment</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=1"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Supporting Information" href="StructureDefinition-supporting-info.html">28.16 Supporting Information</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=2"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Condition Inheritance Pattern" href="ValueSet-condition-inheritance-vs.html">28.17 Condition Inheritance Pattern</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=3"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Disease Codes" href="ValueSet-disease-codes.html">28.18 Disease Codes</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=4"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Case/Control Vars for 'status' categoricals" href="ValueSet-example-study-data-dictionary-case-control-vs-1.html">28.19 Case/Control Vars for 'status' categoricals</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=5"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Harmonized ValueSet for data table" href="ValueSet-datatable-mappings-valueset-1.html">28.20 Harmonized ValueSet for data table</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=6"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Table ValueSet" href="ValueSet-datatable-valueset-1.html">28.21 Table ValueSet</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=7"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="LOINC Answers" href="ValueSet-loinc-answers.html">28.22 LOINC Answers</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=8"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI FHIR Codes" href="ValueSet-ncpi-vs.html">28.23 NCPI FHIR Codes</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=9"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Phenotype Codes" href="ValueSet-phenotype-codes.html">28.24 Phenotype Codes</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=:"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="tbd-codes" href="ValueSet-tbd-codes.html">28.25 tbd-codes</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=;"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Condition Inheritance Pattern" href="CodeSystem-ConditionInheritanceMode.html">28.26 Condition Inheritance Pattern</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=<"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Dataset CodeSystem (lists all tables)" href="CodeSystem-example-study-data-dictionary-dataset-codesystem-1.html">28.27 Dataset CodeSystem (lists all tables)</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=="><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Datatable CodeSystem (lists all variables)" href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">28.28 Datatable CodeSystem (lists all variables)</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=>"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Human Phenotype Ontology" href="CodeSystem-hpo.html">28.29 Human Phenotype Ontology</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=?"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Human Genome Variation Society nomenclature" href="CodeSystem-v3-hgvs.html">28.30 Human Genome Variation Society nomenclature</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=@"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="LOINC Answers" href="CodeSystem-loinc-answers.html">28.31 LOINC Answers</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=A"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Mondo Disease Ontology" href="CodeSystem-mondo.html">28.32 Mondo Disease Ontology</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=B"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCI Thesaurus" href="CodeSystem-ncit.html">28.33 NCI Thesaurus</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=C"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI FHIR Codes" href="CodeSystem-ncpi.html">28.34 NCPI FHIR Codes</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=D"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Data Types for NCPI Research" href="CodeSystem-ncpi-data-types.html">28.35 Data Types for NCPI Research</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=E"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Online Mendelian Inheritance in Man" href="CodeSystem-omim.html">28.36 Online Mendelian Inheritance in Man</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=F"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="ToBeDeterminedCodes ('TbdCodes')" href="CodeSystem-tbd-codes.html">28.37 ToBeDeterminedCodes ('TbdCodes')</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=G"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Summary detail for Center for Mendelian Genomics" href="Observation-anvil-summary-cmg.html">28.38 Summary detail for Center for Mendelian Genomics</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=H"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Baylor Hopkins Center for Mendelian Genomics (BH CMG)" href="Observation-anvil-summary-phs000711.html">28.39 Baylor Hopkins Center for Mendelian Genomics (BH CMG)</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=I"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="diagnostic-implication-1" href="Observation-diagnostic-implication-1.html">28.40 diagnostic-implication-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=J"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="diagnostic-report-1" href="DiagnosticReport-diagnostic-report-1.html">28.41 diagnostic-report-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=K"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="disease-example-1" href="Condition-disease-example-1.html">28.42 disease-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=L"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="drs-document-reference-example-1" href="DocumentReference-drs-document-reference-example-1.html">28.43 drs-document-reference-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=M"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example Encounter Study 01 Patient 01" href="Encounter-example-encounter-study-01-patient-01.html">28.44 Example Encounter Study 01 Patient 01</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=N"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example of Raw Data" href="Observation-example-observation-data-row-1.html">28.45 Example of Raw Data</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=O"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example of a Questionnaire to Represent Raw Data" href="Questionnaire-example-questionnaire-demographics-1.html">28.46 Example of a Questionnaire to Represent Raw Data</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=P"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example of a QuestionnaireResponse to Represent Raw Data" href="QuestionnaireResponse-example-questionnaire-demographics-response-1.html">28.47 Example of a QuestionnaireResponse to Represent Raw Data</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=Q"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Concept Map showing representing harmonization mappings" href="ConceptMap-example-study-data-dictionary-conceptmap-1.html">28.48 Concept Map showing representing harmonization mappings</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=R"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Data-Dictionary Table" href="ActivityDefinition-example-study-data-dictionary-table-1.html">28.49 Data-Dictionary Table</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=S"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example Study Data Dictionary Variable subjectid" href="ObservationDefinition-example-study-data-dictionary-variable-1-1.html">28.50 Example Study Data Dictionary Variable subjectid</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=T"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example Study Data Dictionary Variable gender" href="ObservationDefinition-example-study-data-dictionary-variable-1-2.html">28.51 Example Study Data Dictionary Variable gender</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=U"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example Study Data Dictionary Variable age_at_enrollment" href="ObservationDefinition-example-study-data-dictionary-variable-1-3.html">28.52 Example Study Data Dictionary Variable age_at_enrollment</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=V"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example Study Data Dictionary Variable bmi" href="ObservationDefinition-example-study-data-dictionary-variable-1-4.html">28.53 Example Study Data Dictionary Variable bmi</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=W"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Data Dictionary Variable status" href="ObservationDefinition-example-study-data-dictionary-variable-1-5.html">28.54 Data Dictionary Variable status</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=X"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example Variable Summary with categories (gender)" href="Observation-example-study-summary-gender.html">28.55 Example Variable Summary with categories (gender)</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=Y"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example Group used for Summary Results" href="Group-example-summary-group-1.html">28.56 Example Group used for Summary Results</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=Z"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="family-relationship-example-1" href="Observation-family-relationship-example-1.html">28.57 family-relationship-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=["><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="family-relationship-example-2" href="Observation-family-relationship-example-2.html">28.58 family-relationship-example-2</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=\"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="family-relationship-example-3" href="Observation-family-relationship-example-3.html">28.59 family-relationship-example-3</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=]"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="family-relationship-example-4" href="Observation-family-relationship-example-4.html">28.60 family-relationship-example-4</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=^"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="ncpi-research-study-01" href="ResearchStudy-ncpi-research-study-01.html">28.61 ncpi-research-study-01</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=_"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="ncpi-research-study-01-group-01-main" href="Group-ncpi-research-study-01-group-01-main.html">28.62 ncpi-research-study-01-group-01-main</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=`"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="ncpi-research-study-01-patient-01" href="Patient-ncpi-research-study-01-patient-01.html">28.63 ncpi-research-study-01-patient-01</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=a"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="ncpi-research-study-01-patient-02" href="Patient-ncpi-research-study-01-patient-02.html">28.64 ncpi-research-study-01-patient-02</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=b"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI Research Study 01 Specimen 01" href="Specimen-ncpi-research-study-01-specimen-01.html">28.65 NCPI Research Study 01 Specimen 01</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=c"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="organization-example-1" href="Organization-organization-example-1.html">28.66 organization-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=d"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="patient-example-1" href="Patient-patient-example-1.html">28.67 patient-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=e"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="patient-example-2" href="Patient-patient-example-2.html">28.68 patient-example-2</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=f"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="patient-example-3" href="Patient-patient-example-3.html">28.69 patient-example-3</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=g"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="phenotype-example-1" href="Condition-phenotype-example-1.html">28.70 phenotype-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=h"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="practitioner-example-1" href="Practitioner-practitioner-example-1.html">28.71 practitioner-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=i"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="practitioner-role-example-1" href="PractitionerRole-practitioner-role-example-1.html">28.72 practitioner-role-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=j"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="research-document-reference-example-1" href="DocumentReference-research-document-reference-example-1.html">28.73 research-document-reference-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=k"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="research-study-cmg" href="ResearchStudy-research-study-cmg.html">28.74 research-study-cmg</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=l"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="research-study-example-1" href="ResearchStudy-research-study-example-1.html">28.75 research-study-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=m"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="research-study-phs000711" href="ResearchStudy-research-study-phs000711.html">28.76 research-study-phs000711</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=n"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="research-subject-example-1" href="ResearchSubject-research-subject-example-1.html">28.77 research-subject-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=o"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="research-subject-example-2" href="ResearchSubject-research-subject-example-2.html">28.78 research-subject-example-2</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=p"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="research-subject-example-3" href="ResearchSubject-research-subject-example-3.html">28.79 research-subject-example-3</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=q"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="research-subject-study-01-patient-01" href="ResearchSubject-research-subject-study-01-patient-01.html">28.80 research-subject-study-01-patient-01</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=r"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="research-subject-study-01-patient-02" href="ResearchSubject-research-subject-study-01-patient-02.html">28.81 research-subject-study-01-patient-02</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=s"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="specimen-example-1" href="Specimen-specimen-example-1.html">28.82 specimen-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=t"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="task-example-1" href="Task-task-example-1.html">28.83 task-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=u"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="task-example-2" href="Task-task-example-2.html">28.84 task-example-2</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=v"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin_end.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="variant-example-1" href="Observation-variant-example-1.html">28.85 variant-example-1</a></td></tr></tbody></table></div> + <?xml version="1.0" encoding="UTF-8"?><div style="col-12"><table style="border:0px;font-size:11px;font-family:verdana;vertical-align:top;" cellpadding="0" border="0" cellspacing="0"><tbody><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img onClick="tableRowAction(this)" src="tbl_vjoin-open.png" alt="." style="background-color: inherit" class="hierarchy"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Table of Contents" href="toc.html">0 Table of Contents</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!""><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Home" href="index.html">1 Home</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!#"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Authors" href="authors.html">2 Authors</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!$"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Background" href="background.html">3 Background</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!%"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Childhood Cancer" href="childhood_cancer.html">4 Childhood Cancer</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!&"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Contact" href="contact.html">5 Contact</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!'"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Downloads" href="downloads.html">6 Downloads</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!("><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Ehr" href="ehr.html">7 Ehr</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!)"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example Raw Data" href="example_raw_data.html">8 Example Raw Data</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!*"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example Study Metadata" href="example_study_metadata.html">9 Example Study Metadata</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!+"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Family" href="family.html">10 Family</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!,"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="FHIR Basics" href="FHIR_Basics.html">11 FHIR Basics</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!-"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Files" href="files.html">12 Files</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!."><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Finding a Research Study" href="finding_a_research_study.html">13 Finding a Research Study</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!/"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Harmonization" href="harmonization.html">14 Harmonization</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!0"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Ig Versioning" href="ig_versioning.html">15 Ig Versioning</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!1"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Modular Ig" href="modular_ig.html">16 Modular Ig</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!2"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Ncpi" href="ncpi.html">17 Ncpi</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!3"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Participant" href="participant.html">18 Participant</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!4"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Performing a Genomic Analysis" href="performing_a_genomic_analysis.html">19 Performing a Genomic Analysis</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!5"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Rare Disease" href="rare_disease.html">20 Rare Disease</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!6"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Research Study" href="research_study.html">21 Research Study</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!7"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Structure Definition Study Data Dictionary Variable Note" href="StructureDefinition-study-data-dictionary-variable-note.html">22 Structure Definition Study Data Dictionary Variable Note</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!8"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Study Metadata" href="study_metadata.html">23 Study Metadata</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!9"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Tabular" href="tabular.html">24 Tabular</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!:"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Use Case Tabular Data" href="use_case_tabular_data.html">25 Use Case Tabular Data</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!;"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Use Cases" href="use_cases.html">26 Use Cases</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!<"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Using Source Data" href="using_source_data.html">27 Using Source Data</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!="><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin_end.png"/><img onClick="tableRowAction(this)" src="tbl_vjoin-open.png" alt="." style="background-color: inherit" class="hierarchy"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Artifacts Summary" href="artifacts.html">28 Artifacts Summary</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=""><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="DRS Document Reference" href="StructureDefinition-ncpi-drs-document-reference.html">28.1 DRS Document Reference</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=#"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI Disease" href="StructureDefinition-disease.html">28.2 NCPI Disease</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=$"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI Family Relationship" href="StructureDefinition-family-relationship.html">28.3 NCPI Family Relationship</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=%"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI Research Study" href="StructureDefinition-ncpi-research-study.html">28.4 NCPI Research Study</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=&"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI Phenotype" href="StructureDefinition-phenotype.html">28.5 NCPI Phenotype</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!='"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Raw Data Observation" href="StructureDefinition-raw-data-observation.html">28.6 Raw Data Observation</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=("><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Research Document Reference" href="StructureDefinition-ncpi-research-document-reference.html">28.7 Research Document Reference</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=)"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Research Task" href="StructureDefinition-ncpi-specimen-task.html">28.8 Research Task</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=*"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI Data Dictionary Harmony" href="StructureDefinition-study-data-dictionary-harmony.html">28.9 NCPI Data Dictionary Harmony</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=+"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI Study Data Dictionary Data Table" href="StructureDefinition-study-data-dictionary-table.html">28.10 NCPI Study Data Dictionary Data Table</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=,"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI Study Data Dictionary Data Variable" href="StructureDefinition-study-data-dictionary-variable.html">28.11 NCPI Study Data Dictionary Data Variable</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=-"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI Study Group" href="StructureDefinition-study-group.html">28.12 NCPI Study Group</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=."><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Study Summary" href="StructureDefinition-study-summary.html">28.13 Study Summary</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=/"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Study Variable Summary" href="StructureDefinition-study-variable-summary.html">28.14 Study Variable Summary</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=0"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="DRS Attachment" href="StructureDefinition-ncpi-drs-attachment.html">28.15 DRS Attachment</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=1"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Supporting Information" href="StructureDefinition-supporting-info.html">28.16 Supporting Information</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=2"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Condition Inheritance Pattern" href="ValueSet-condition-inheritance-vs.html">28.17 Condition Inheritance Pattern</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=3"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Disease Codes" href="ValueSet-disease-codes.html">28.18 Disease Codes</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=4"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Case/Control Vars for 'status' categoricals" href="ValueSet-example-study-data-dictionary-case-control-vs-1.html">28.19 Case/Control Vars for 'status' categoricals</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=5"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Harmonized ValueSet for data table" href="ValueSet-datatable-mappings-valueset-1.html">28.20 Harmonized ValueSet for data table</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=6"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Table ValueSet" href="ValueSet-datatable-valueset-1.html">28.21 Table ValueSet</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=7"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="LOINC Answers" href="ValueSet-loinc-answers.html">28.22 LOINC Answers</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=8"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI FHIR Codes" href="ValueSet-ncpi-vs.html">28.23 NCPI FHIR Codes</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=9"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Phenotype Codes" href="ValueSet-phenotype-codes.html">28.24 Phenotype Codes</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=:"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="tbd-codes" href="ValueSet-tbd-codes.html">28.25 tbd-codes</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=;"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Condition Inheritance Pattern" href="CodeSystem-ConditionInheritanceMode.html">28.26 Condition Inheritance Pattern</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=<"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Dataset CodeSystem (lists all tables)" href="CodeSystem-example-study-data-dictionary-dataset-codesystem-1.html">28.27 Dataset CodeSystem (lists all tables)</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=="><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Datatable CodeSystem (lists all variables)" href="CodeSystem-example-study-data-dictionary-datatable-codesystem-1.html">28.28 Datatable CodeSystem (lists all variables)</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=>"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Human Phenotype Ontology" href="CodeSystem-hpo.html">28.29 Human Phenotype Ontology</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=?"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Human Genome Variation Society nomenclature" href="CodeSystem-v3-hgvs.html">28.30 Human Genome Variation Society nomenclature</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=@"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="LOINC Answers" href="CodeSystem-loinc-answers.html">28.31 LOINC Answers</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=A"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Mondo Disease Ontology" href="CodeSystem-mondo.html">28.32 Mondo Disease Ontology</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=B"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCI Thesaurus" href="CodeSystem-ncit.html">28.33 NCI Thesaurus</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=C"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI FHIR Codes" href="CodeSystem-ncpi.html">28.34 NCPI FHIR Codes</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=D"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Data Types for NCPI Research" href="CodeSystem-ncpi-data-types.html">28.35 Data Types for NCPI Research</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=E"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Online Mendelian Inheritance in Man" href="CodeSystem-omim.html">28.36 Online Mendelian Inheritance in Man</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=F"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="ToBeDeterminedCodes ('TbdCodes')" href="CodeSystem-tbd-codes.html">28.37 ToBeDeterminedCodes ('TbdCodes')</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=G"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Summary detail for Center for Mendelian Genomics" href="Observation-anvil-summary-cmg.html">28.38 Summary detail for Center for Mendelian Genomics</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=H"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Baylor Hopkins Center for Mendelian Genomics (BH CMG)" href="Observation-anvil-summary-phs000711.html">28.39 Baylor Hopkins Center for Mendelian Genomics (BH CMG)</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=I"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="diagnostic-implication-1" href="Observation-diagnostic-implication-1.html">28.40 diagnostic-implication-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=J"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="diagnostic-report-1" href="DiagnosticReport-diagnostic-report-1.html">28.41 diagnostic-report-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=K"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="disease-example-1" href="Condition-disease-example-1.html">28.42 disease-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=L"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="drs-document-reference-example-1" href="DocumentReference-drs-document-reference-example-1.html">28.43 drs-document-reference-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=M"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example Encounter Study 01 Patient 01" href="Encounter-example-encounter-study-01-patient-01.html">28.44 Example Encounter Study 01 Patient 01</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=N"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example of Raw Data" href="Observation-example-observation-data-row-1.html">28.45 Example of Raw Data</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=O"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example of a Questionnaire to Represent Raw Data" href="Questionnaire-example-questionnaire-demographics-1.html">28.46 Example of a Questionnaire to Represent Raw Data</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=P"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example of a QuestionnaireResponse to Represent Raw Data" href="QuestionnaireResponse-example-questionnaire-demographics-response-1.html">28.47 Example of a QuestionnaireResponse to Represent Raw Data</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=Q"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Concept Map showing representing harmonization mappings" href="ConceptMap-example-study-data-dictionary-conceptmap-1.html">28.48 Concept Map showing representing harmonization mappings</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=R"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Data-Dictionary Table" href="ActivityDefinition-example-study-data-dictionary-table-1.html">28.49 Data-Dictionary Table</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=S"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example Study Data Dictionary Variable subjectid" href="ObservationDefinition-example-study-data-dictionary-variable-1-1.html">28.50 Example Study Data Dictionary Variable subjectid</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=T"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example Study Data Dictionary Variable gender" href="ObservationDefinition-example-study-data-dictionary-variable-1-2.html">28.51 Example Study Data Dictionary Variable gender</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=U"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example Study Data Dictionary Variable age_at_enrollment" href="ObservationDefinition-example-study-data-dictionary-variable-1-3.html">28.52 Example Study Data Dictionary Variable age_at_enrollment</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=V"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example Study Data Dictionary Variable bmi" href="ObservationDefinition-example-study-data-dictionary-variable-1-4.html">28.53 Example Study Data Dictionary Variable bmi</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=W"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Data Dictionary Variable status" href="ObservationDefinition-example-study-data-dictionary-variable-1-5.html">28.54 Data Dictionary Variable status</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=X"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example Variable Summary with categories (gender)" href="Observation-example-study-summary-gender.html">28.55 Example Variable Summary with categories (gender)</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=Y"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="Example Group used for Summary Results" href="Group-example-summary-group-1.html">28.56 Example Group used for Summary Results</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=Z"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="family-relationship-example-1" href="Observation-family-relationship-example-1.html">28.57 family-relationship-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=["><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="family-relationship-example-2" href="Observation-family-relationship-example-2.html">28.58 family-relationship-example-2</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=\"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="family-relationship-example-3" href="Observation-family-relationship-example-3.html">28.59 family-relationship-example-3</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=]"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="family-relationship-example-4" href="Observation-family-relationship-example-4.html">28.60 family-relationship-example-4</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=^"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="ncpi-research-study-01" href="ResearchStudy-ncpi-research-study-01.html">28.61 ncpi-research-study-01</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=_"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="ncpi-research-study-01-group-01-main" href="Group-ncpi-research-study-01-group-01-main.html">28.62 ncpi-research-study-01-group-01-main</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=`"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="ncpi-research-study-01-patient-01" href="Patient-ncpi-research-study-01-patient-01.html">28.63 ncpi-research-study-01-patient-01</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=a"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="ncpi-research-study-01-patient-02" href="Patient-ncpi-research-study-01-patient-02.html">28.64 ncpi-research-study-01-patient-02</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=b"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="NCPI Research Study 01 Specimen 01" href="Specimen-ncpi-research-study-01-specimen-01.html">28.65 NCPI Research Study 01 Specimen 01</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=c"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="organization-example-1" href="Organization-organization-example-1.html">28.66 organization-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=d"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="patient-example-1" href="Patient-patient-example-1.html">28.67 patient-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=e"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="patient-example-2" href="Patient-patient-example-2.html">28.68 patient-example-2</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=f"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="patient-example-3" href="Patient-patient-example-3.html">28.69 patient-example-3</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=g"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="phenotype-example-1" href="Condition-phenotype-example-1.html">28.70 phenotype-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=h"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="practitioner-example-1" href="Practitioner-practitioner-example-1.html">28.71 practitioner-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=i"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="practitioner-role-example-1" href="PractitionerRole-practitioner-role-example-1.html">28.72 practitioner-role-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=j"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="research-document-reference-example-1" href="DocumentReference-research-document-reference-example-1.html">28.73 research-document-reference-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=k"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="research-study-cmg" href="ResearchStudy-research-study-cmg.html">28.74 research-study-cmg</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=l"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="research-study-example-1" href="ResearchStudy-research-study-example-1.html">28.75 research-study-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=m"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="research-study-phs000711" href="ResearchStudy-research-study-phs000711.html">28.76 research-study-phs000711</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=n"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="research-subject-example-1" href="ResearchSubject-research-subject-example-1.html">28.77 research-subject-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=o"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="research-subject-example-2" href="ResearchSubject-research-subject-example-2.html">28.78 research-subject-example-2</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=p"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="research-subject-example-3" href="ResearchSubject-research-subject-example-3.html">28.79 research-subject-example-3</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=q"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="research-subject-study-01-patient-01" href="ResearchSubject-research-subject-study-01-patient-01.html">28.80 research-subject-study-01-patient-01</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=r"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="research-subject-study-01-patient-02" href="ResearchSubject-research-subject-study-01-patient-02.html">28.81 research-subject-study-01-patient-02</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=s"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="specimen-example-1" href="Specimen-specimen-example-1.html">28.82 specimen-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=t"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="task-example-1" href="Task-task-example-1.html">28.83 task-example-1</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=u"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="task-example-2" href="Task-task-example-2.html">28.84 task-example-2</a></td></tr><tr style="border:0px;padding:0px;vertical-align:top;background-color:white;" id="!=v"><td style="vertical-align:top;text-align:left;background-color:white;padding:0px 4px 0px 4px;white-space:nowrap;background-image:url(tbl_bck0.png)" class="hierarchy"><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_spacer.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_blank.png"/><img style="background-color:inherit" alt="." class="hierarchy" src="tbl_vjoin_end.png"/><img style="background-color:white;background-color:inherit" alt="." class="hierarchy" src="icon_page.gif"/><a title="variant-example-1" href="Observation-variant-example-1.html">28.85 variant-example-1</a></td></tr></tbody></table></div> </div> </div> <!-- /inner-wrapper --> </div> <!-- /row --> @@ -246,7 +246,7 @@ <h2>Table of Contents</h2> <div class="inner-wrapper"> <p> - IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Mon, Nov 28, 2022 21:07+0000">2022-11-28</span> + IG © 2021+ <a style="color:var(--footer-hyperlink-text-color)" href="https://github.com/nih-ncpi">NCPI FHIR Working Group</a>. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on <a style="color: var(--footer-hyperlink-text-color)" href="http://hl7.org/fhir/R4/">FHIR 4.0.1</a>. Generated <span title="Fri, Dec 9, 2022 17:30+0000">2022-12-09</span> <br/> <span style="color: var(--footer-highlight-text-color)"> Links: <a style="color: var(--footer-hyperlink-text-color)" href="toc.html">Table of Contents</a> | diff --git a/use_case_raw_data.html b/use_case_tabular_data.html similarity index 95% rename from use_case_raw_data.html rename to use_case_tabular_data.html index a3051ac6..5bd0090d 100644 --- a/use_case_raw_data.html +++ b/use_case_tabular_data.html @@ -3,7 +3,7 @@ <html xml:lang="en" xmlns="http://www.w3.org/1999/xhtml" lang="en"> <head> <meta content="text/html;charset=utf-8" http-equiv="Content-Type"/> - <title>NCPI-FHIR-IMPLEMENTATION-GUIDE\Use Case Raw Data - FHIR v4.0.1 + NCPI-FHIR-IMPLEMENTATION-GUIDE\Use Case Tabular Data - FHIR v4.0.1 @@ -150,7 +150,7 @@ Childhood Cancer

  • - Using "Source" Data + Using "Source" Data
  • EHR Data @@ -198,7 +198,7 @@
    @@ -219,7 +219,7 @@

    NCPI FHIR Implementation Guide - Local Development build (v0.2.0). See the Directory of published versions

    -

    Use Case Raw Data

    +

    Use Case Tabular Data

    @@ -237,8 +237,8 @@

    Use Case Raw Data

    -

    Representing Raw Data in FHIR

    -

    There are a number of reasons to support representing raw data in FHIR whether or not it is expected that the data will be fully transformed to meet the appropriate FHIR representation for interoperable data. These include:

    +

    Representing Tabular Data in FHIR

    +

    There are a number of reasons to support representing tabular data in FHIR whether or not it is expected that the data will be fully transformed to meet the appropriate FHIR representation for interoperable data. These include:

    • Provide FHIR access for data where there isn’t funding to properly transform it to meet the interoperable model.
      • @@ -246,8 +246,8 @@

      Representing Raw Data in FHIR

    • Provide data provenance for all of the transformed data using the same API, FHIR as opposed to requiring researchers to step outside FHIR and attempt to trace the origins back to those original data sources.
    -

    Raw Data as Observations (with components)

    -

    Raw Data as Observations +

    Tabular Data as Observations (with components)

    +

    Tabular Data as Observations FHIR Observations are rich resource structures that provide a direct link to a subject, which can be a Patient or a group of Patients) and an optional focus which can point to any other resource. There is also the possibility to link the observation to an encounter. Each observation can have 0 or more component entries.

    Component Composition
    @@ -289,7 +289,7 @@
    Encounters

    For some data tables, it is easy to imagine they are describing the outcome of a single encounter which will be realized by during a transformation. It seems reasonable that such a relationship could be captured for these resources.

    Raw Data as Questionnaires and QuestionnaireResponses

    -

    Raw Data as Questionnaires +

    Tabular Data as Questionnaires FHIR R4 natively provides 2 resources to support survey instruments in FHIR along with their responses: Questionnaire and QuestionnaireResponse. These are rich resources intended to support the types of surveys that may be used during routine medical care. As a result, these fit nicely alongside our objectives for capturing raw research data.

    There are two components to this model:

    @@ -329,7 +329,7 @@
    QuestionnaireResponse

    - IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-11-28 + IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-12-09
    Links: Table of Contents | diff --git a/use_cases.html b/use_cases.html index f793da56..d89d35da 100644 --- a/use_cases.html +++ b/use_cases.html @@ -150,7 +150,7 @@ Childhood Cancer

  • - Using "Source" Data + Using "Source" Data
  • EHR Data @@ -241,7 +241,7 @@

    Use Cases

  • Childhood Cancer
  • Existing Study Data
  • EHR Data
    • -
  • Representation of Raw Data
    • +
  • Representation of Tabular Data
    • @@ -344,7 +344,7 @@

    EHR Data

    This IG will mainly serve to provide the ResearchStudy and ResearchSubject resource layer on top of the EHR data as collected. Additional work may need to be done to address the challenges of EHR data interoperability and consistency, but this is within the bounds of any other type of study data.

    -

    Representation of Raw Data

    +

    Representation of Tabular Data

    There are a number of reasons to support representing raw data in FHIR whether or not it is expected that the data will be fully transformed to meet the appropriate FHIR representation for interoperable data. These include:

    -

    For more information, see the detailed description.

    +

    For more information, see the detailed description.

    @@ -379,7 +379,7 @@

    Representation of Raw Data

    - IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-11-28 + IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-12-09
    Links: Table of Contents | diff --git a/using_source_data.html b/using_source_data.html index 26589baa..f55c14d0 100644 --- a/using_source_data.html +++ b/using_source_data.html @@ -150,7 +150,7 @@ Childhood Cancer

  • - Using "Source" Data + Using "Source" Data
  • EHR Data @@ -282,7 +282,7 @@

    Support for Untransformed Data

    - IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-11-28 + IG © 2021+ NCPI FHIR Working Group. Package NCPI-FHIR-Implementation-Guide#0.2.0 based on FHIR 4.0.1. Generated 2022-12-09
    Links: Table of Contents | diff --git a/validator-NCPI-FHIR-Implementation-Guide.pack b/validator-NCPI-FHIR-Implementation-Guide.pack index 36d7c711..eb58dc73 100644 Binary files a/validator-NCPI-FHIR-Implementation-Guide.pack and b/validator-NCPI-FHIR-Implementation-Guide.pack differ diff --git a/validator.pack b/validator.pack index 36d7c711..eb58dc73 100644 Binary files a/validator.pack and b/validator.pack differ