diff --git a/README.md b/README.md index a50303a..08fb4ea 100644 --- a/README.md +++ b/README.md @@ -1,5 +1,21 @@ # FALCON cortical surface extraction tool +## Installation +### Using conda: +```conda install -c vfonov falcon``` - will work on linux +### Compiling from the source: +Prerequisites: minc-toolkit-v2 (http://bic-mni.github.io/), libtiff, povray, imagemagick +``` +cmake \ + -DCMAKE_INSTALL_PREFIX:PATH= \ + -DMINC_TOOLKIT_DIR:PATH=/opt/minc/1.9.17 \ + -DCMAKE_BUILD_TYPE:STRING=Release \ + -DHAVE_POVRAY:BOOL=ON \ + -DUSE_OPENMP:BOOL=ON + +make && make install +``` + ## Included higlevel scripts * falcon_run.sh - execute FALCON surface extraction pipeline ```