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Add bufr2ioda ctest #207

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merged 6 commits into from
Oct 23, 2024
Merged

Add bufr2ioda ctest #207

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5422ae7
First working example
SamuelDegelia-NOAA Oct 18, 2024
348c254
Remove duplicate line
SamuelDegelia-NOAA Oct 18, 2024
f074500
Clean up some of CMake and increase parallel runs of ctest from 6 to 7
SamuelDegelia-NOAA Oct 18, 2024
76eeb42
Reorganize a bit
SamuelDegelia-NOAA Oct 21, 2024
9be3a90
Merge branch 'develop' into feature/bufr2ioda_ctest
guoqing-noaa Oct 22, 2024
2b6526e
Change exclusive to memory request
SamuelDegelia-NOAA Oct 23, 2024
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36 changes: 33 additions & 3 deletions rrfs-test/CMakeLists.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -62,10 +62,9 @@ if(FV3_DYCORE)
set(MPI_ARGS ${RESTORE_MPI_ARGS})
endif()

endif()

endif()

if(MPAS_DYCORE)
if(MPAS_DYCORE)

message(STATUS "MACHINE_ID is " ${MACHINE_ID})
if("${MACHINE_ID}" STREQUAL "orion")
Expand Down Expand Up @@ -117,4 +116,35 @@ if(FV3_DYCORE)
set(MPI_ARGS ${RESTORE_MPI_ARGS})
endif()

########################
### Bufr2ioda ctests ###
########################

# YAML-based bufr2ioda
set(case "rrfs_bufr2ioda_msonet")
set(casedir "${CMAKE_CURRENT_BINARY_DIR}/rundir-${case}")
set(src_casedir "${rrfs-test_data_local}/rrfs-data_mpasjedi_2024052700")
if (NOT EXISTS "${casedir}")
file(MAKE_DIRECTORY ${casedir})
endif()
file(CREATE_LINK ${src_casedir}/data ${casedir}/data SYMBOLIC)
configure_file(${src_casedir}/data/obs/bufr/rap.t00z.prepbufr.tm00 ${casedir}/prepbufr COPYONLY)
file(COPY ${src_yaml}/${case}.yaml DESTINATION ${casedir})
set(MPI_ARGS "--time=00:05:00 --mem=64G")
set(IODA_CONV_COMP_TOL "5.0e-4")
ecbuild_add_test( TARGET ${case}
MPI 1
TYPE SCRIPT
COMMAND bash
WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/rundir-${case}
ARGS ${CMAKE_SOURCE_DIR}/rrfs-test/ush/iodaconv_comp_rrfs.sh
netcdf
"${CMAKE_BINARY_DIR}/bin/bufr2ioda.x ${case}.yaml"
data/obs/ioda_mesonet.nc
ioda_mesonet.nc
${IODA_CONV_COMP_TOL}
DEPENDS bufr2ioda.x )


endif()

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