diff --git a/util/gdas_init/copy_coldstart_files.sh b/util/gdas_init/copy_coldstart_files.sh
old mode 100755
new mode 100644
index d8c80fac3..41e70910b
--- a/util/gdas_init/copy_coldstart_files.sh
+++ b/util/gdas_init/copy_coldstart_files.sh
@@ -1,6 +1,4 @@
-#!/bin/bash
-
-# Copy files from the working directory to the
+opy files from the working directory to the
 # output directory.
 
 copy_data()
@@ -10,9 +8,15 @@ copy_data()
 
   MEM=$1
 
-  SAVEDIR_MODEL_DATA=$SUBDIR/model_data/atmos/input
+  #JKHSAVEDIR_MODEL_DATA=$SUBDIR/model_data/atmos/input
+  SAVEDIR_MODEL_DATA=${ICSDIR}/${yy}${mm}${dd}${hh}/${CDUMP}/${CASE}/INPUT
   mkdir -p $SAVEDIR_MODEL_DATA
   cp gfs_ctrl.nc $SAVEDIR_MODEL_DATA
+  touch $SAVEDIR_MODEL_DATA/chgres_done                 ## JKH
+
+  TMPDIR=$SUBDIR/model_data/atmos
+  mkdir -p $TMPDIR
+  ln -fs $SAVEDIR_MODEL_DATA $TMPDIR/input
 
   for tile in 'tile1' 'tile2' 'tile3' 'tile4' 'tile5' 'tile6'
   do
@@ -37,6 +41,7 @@ mm=$4
 dd=$5
 hh=$6
 INPUT_DATA_DIR=$7
+ICS_DIR=$8
 
 if [ ${MEMBER} == 'hires' ]; then
   MEMBER='gdas'
diff --git a/util/gdas_init/run_pre-v14.chgres.sh b/util/gdas_init/run_pre-v14.chgres.sh
old mode 100755
new mode 100644
index 9403c66d8..e6815c180
--- a/util/gdas_init/run_pre-v14.chgres.sh
+++ b/util/gdas_init/run_pre-v14.chgres.sh
@@ -58,6 +58,7 @@ cat << EOF > fort.41
  input_type="gfs_sigio"
  tracers_input="spfh","o3mr","clwmr"
  tracers="sphum","o3mr","liq_wat"
+ thomp_mp_climo_file="${FIX_AM}/Thompson_MP_MONTHLY_CLIMO.nc"
 /
 EOF
 
@@ -68,7 +69,7 @@ if [ $rc != 0 ]; then
   exit $rc
 fi
 
-$GDAS_INIT_DIR/copy_coldstart_files.sh $MEMBER $OUTDIR $yy $mm $dd $hh $INPUT_DATA_DIR
+$GDAS_INIT_DIR/copy_coldstart_files.sh $MEMBER $OUTDIR $yy $mm $dd $hh $INPUT_DATA_DIR $ICSDIR
 
 rm -fr $WORKDIR
 
diff --git a/util/gdas_init/run_v14.chgres.sh b/util/gdas_init/run_v14.chgres.sh
old mode 100755
new mode 100644
index 590444154..76608fe07
--- a/util/gdas_init/run_v14.chgres.sh
+++ b/util/gdas_init/run_v14.chgres.sh
@@ -55,6 +55,7 @@ cat << EOF > fort.41
  input_type="gfs_gaussian_nemsio"
  tracers="sphum","liq_wat","o3mr"
  tracers_input="spfh","clwmr","o3mr"
+ thomp_mp_climo_file="${FIX_AM}/Thompson_MP_MONTHLY_CLIMO.nc"
 /
 EOF
 
@@ -65,7 +66,7 @@ if [ $rc != 0 ]; then
   exit $rc
 fi
 
-$GDAS_INIT_DIR/copy_coldstart_files.sh $MEMBER $OUTDIR $yy $mm $dd $hh $INPUT_DATA_DIR
+$GDAS_INIT_DIR/copy_coldstart_files.sh $MEMBER $OUTDIR $yy $mm $dd $hh $INPUT_DATA_DIR $ICSDIR
 
 rm -fr $WORKDIR
 
diff --git a/util/gdas_init/run_v15.chgres.gfs.sh b/util/gdas_init/run_v15.chgres.gfs.sh
old mode 100755
new mode 100644
index b24920922..0c9fe2a95
--- a/util/gdas_init/run_v15.chgres.gfs.sh
+++ b/util/gdas_init/run_v15.chgres.gfs.sh
@@ -44,6 +44,7 @@ cat << EOF > fort.41
  input_type="gaussian_nemsio"
  tracers="sphum","liq_wat","o3mr","ice_wat","rainwat","snowwat","graupel"
  tracers_input="spfh","clwmr","o3mr","icmr","rwmr","snmr","grle"
+ thomp_mp_climo_file="${FIX_AM}/Thompson_MP_MONTHLY_CLIMO.nc"
 /
 EOF
 
@@ -54,7 +55,7 @@ if [ $rc != 0 ]; then
   exit $rc
 fi
 
-$GDAS_INIT_DIR/copy_coldstart_files.sh gfs $OUTDIR $yy $mm $dd $hh $INPUT_DATA_DIR
+$GDAS_INIT_DIR/copy_coldstart_files.sh gfs $OUTDIR $yy $mm $dd $hh $INPUT_DATA_DIR $ICSDIR
 
 rm -fr $WORKDIR
 
diff --git a/util/gdas_init/run_v15.chgres.sh b/util/gdas_init/run_v15.chgres.sh
old mode 100755
new mode 100644
index 8b9cbdd1c..2fa7475ba
--- a/util/gdas_init/run_v15.chgres.sh
+++ b/util/gdas_init/run_v15.chgres.sh
@@ -63,6 +63,7 @@ cat << EOF > fort.41
  convert_nst=.true.
  tracers="sphum","liq_wat","o3mr","ice_wat","rainwat","snowwat","graupel"
  tracers_input="sphum","liq_wat","o3mr","ice_wat","rainwat","snowwat","graupel"
+ thomp_mp_climo_file="${FIX_AM}/Thompson_MP_MONTHLY_CLIMO.nc"
 /
 EOF
 
@@ -73,7 +74,7 @@ if [ $rc != 0 ]; then
   exit $rc
 fi
 
-$GDAS_INIT_DIR/copy_coldstart_files.sh $MEMBER $OUTDIR $yy $mm $dd $hh $RADSTAT_DATA_DIR
+$GDAS_INIT_DIR/copy_coldstart_files.sh $MEMBER $OUTDIR $yy $mm $dd $hh $RADSTAT_DATA_DIR $ICSDIR
 
 rm -fr $WORKDIR
 
diff --git a/util/gdas_init/run_v16.chgres.sh b/util/gdas_init/run_v16.chgres.sh
old mode 100755
new mode 100644
index 9b95843cb..50df28256
--- a/util/gdas_init/run_v16.chgres.sh
+++ b/util/gdas_init/run_v16.chgres.sh
@@ -68,6 +68,7 @@ cat << EOF > fort.41
  input_type="gaussian_netcdf"
  tracers="sphum","liq_wat","o3mr","ice_wat","rainwat","snowwat","graupel"
  tracers_input="spfh","clwmr","o3mr","icmr","rwmr","snmr","grle"
+ thomp_mp_climo_file="${FIX_AM}/Thompson_MP_MONTHLY_CLIMO.nc"
 /
 EOF
 
@@ -78,7 +79,7 @@ if [ $rc != 0 ]; then
   exit $rc
 fi
 
-$GDAS_INIT_DIR/copy_coldstart_files.sh $MEMBER $OUTDIR $yy $mm $dd $hh $INPUT_DATA_DIR
+$GDAS_INIT_DIR/copy_coldstart_files.sh $MEMBER $OUTDIR $yy $mm $dd $hh $INPUT_DATA_DIR $ICSDIR
 
 rm -fr $WORKDIR
 
diff --git a/util/gdas_init/run_v16retro.chgres.sh b/util/gdas_init/run_v16retro.chgres.sh
old mode 100755
new mode 100644
index 2a5e59376..5195924e1
--- a/util/gdas_init/run_v16retro.chgres.sh
+++ b/util/gdas_init/run_v16retro.chgres.sh
@@ -81,6 +81,7 @@ cat << EOF > fort.41
  convert_nst=.true.
  tracers="sphum","liq_wat","o3mr","ice_wat","rainwat","snowwat","graupel"
  tracers_input="sphum","liq_wat","o3mr","ice_wat","rainwat","snowwat","graupel"
+ thomp_mp_climo_file="${FIX_AM}/Thompson_MP_MONTHLY_CLIMO.nc"
 /
 EOF
 
@@ -91,7 +92,7 @@ if [ $rc != 0 ]; then
   exit $rc
 fi
 
-$GDAS_INIT_DIR/copy_coldstart_files.sh $MEMBER $OUTDIR $yy $mm $dd $hh $RADSTAT_DATA_DIR
+$GDAS_INIT_DIR/copy_coldstart_files.sh $MEMBER $OUTDIR $yy $mm $dd $hh $RADSTAT_DATA_DIR $ICSDIR
 
 rm -fr $WORKDIR