ngen-cal.yaml

# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions

name: Calibration

on:
  push:
    branches: master
  pull_request:
    branches: master

jobs:
  build:
    timeout-minutes: 5
    runs-on: ubuntu-latest
    strategy:
      matrix:
        #3.10 ends up building a lot of python deps as whls (e.g. pandas) and it takes a LONG time (11m42s)
        #so for now, don't enable testing on 3.10.  3.11 similarly builds some deps, but it
        #particaularly fails to build the tables dep since the ubuntu image doesn't have hdf5
        #When 3.11 tables wheel is available, then add it?  Also, put 3.10 in quotes or it turns into 3.1
        python-version: ['3.8', '3.9', '3.10', '3.11']

    steps:
    - uses: actions/checkout@v2

    - name: Set up Python ${{ matrix.python-version }}
      uses: actions/setup-python@v4
      with:
        python-version: ${{ matrix.python-version }}

    - name: Lint with flake8
      run: |
        pip install -U pip
        pip install flake8
        # stop the build if there are Python syntax errors or undefined names
        flake8 ./python/ngen_cal --count --select=E9,F63,F7,F82 --show-source --statistics
        # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
        flake8 ./python/ngen_cal --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics

    - name: Installing libnetcdf
      run: |
        sudo apt-get update
        sudo apt-get install -y --fix-missing libnetcdf-dev

    - name: Installing ngen_cal in python virtual environment
      run: |
        # setup virtual environment
        python -m venv venv
        source ./venv/bin/activate
        # upgrade pip
        pip install -U pip
        pip install "python/ngen_cal[develop,netcdf]"
        # NOTE: Install checked out version of ngen_conf.
        # This ensure ngen_cal tests test against ngen_conf source checked out by the runner.
        pip install python/ngen_conf
      #3.11 on GH runner can't install tables correctly, so this will fail...
      #appearently this doesn't do what I want, it still cancels any outstanding jobs...
      #for now, just turning off 3.11 for this test...
      #continue-on-error: ${{matrix.python-version == 3.11 }}

    - name: List dependency versions
      run: |
        source ./venv/bin/activate
        pip freeze

    - name: Testing ngen_cal with pytest
      run: |
        source ./venv/bin/activate
        pytest python/ngen_cal