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Problems running example.ALMAdvanced #89

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usellllzxcv opened this issue Dec 28, 2021 · 5 comments
Open

Problems running example.ALMAdvanced #89

usellllzxcv opened this issue Dec 28, 2021 · 5 comments

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@usellllzxcv
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I run example.ABL.flatTerrain.stable case as precursor and trying to run example.ALMAdvanced. Then my log.1.windPlantSolver.ALMAdvanced shows some errors. I suspect there is something wrong with my source file, but I am not sure. I need your help urgently.

Here are my log.1.windPlantSolver.ALMAdvanced.

Uploading log.1.windPlantSolver.ALMAdvanced.docx…
@usellllzxcv
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/---------------------------------------------------------------------------
| ========= | |
| \ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \ / O peration | Version: 2.4.0 |
| \ / A nd | Web: www.OpenFOAM.org |
| \/ M anipulation | |
*---------------------------------------------------------------------------*/
Build : 2.4.0-dcea1e13ff76
Exec : windPlantSolver.ALMAdvanced -parallel
Date : Dec 22 2021
Time : 00:55:01
Host : "Jarvis"
PID : 11078
Case : /home/gordon/OpenFOAM/sowfa/ALM20200
nProcs : 8
Slaves :
7
(
"Jarvis.11079"
"Jarvis.11080"
"Jarvis.11081"
"Jarvis.11082"
"Jarvis.11083"
"Jarvis.11084"
"Jarvis.11085"
)
Pstream initialized with:
floatTransfer : 0
nProcsSimpleSum : 0
commsType : nonBlocking
polling iterations : 0
sigFpe : Enabling floating point exception trapping (FOAM_SIGFPE).
fileModificationChecking : Monitoring run-time modified files using timeStampMaster
allowSystemOperations : Allowing user-supplied system call operations
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Create time
Create mesh for time = 20200
Reading the gravitational acceleration, g...
Reading planetary rotation rate...
Reading the latitude...
Creating and reading potential temperature field, T...
Creating mean temperature field, Tmean...
Creating fluctuating temperature field, Tprime...
Creating and reading modified pressure field, p_rgh...
Creating and reading velocity field, U...
Creating mean velocity field, Umean...
Creating fluctuating velocity field, Uprime...
Creating and calculating velocity flux field, phi...
Reading/calculating face flux field phi
Reading transport properties...
Selecting incompressible transport model Newtonian
Reading the atmospheric boundary layer properties...
Omega [0 0 -1 0 0 0 0] (0 1.74533e-33 0)
Creating turbulence model...
Selecting turbulence model type LESModel
Selecting LES turbulence model oneEqEddyABL
Selecting LES delta type smooth
Selecting LES delta type cubeRootVol
oneEqEddyABLCoeffs
{
ce 0.93;
ck 0.0673;
TName "T";
kappatName "kappat";
}
[7] #0 Foam::error::printStack(Foam::Ostream&)[0] #0 Foam::error::printStack(Foam::Ostream&)[1] #0 Foam::error::printStack(Foam::Ostream&)[2] #0 Foam::error::printStack(Foam::Ostream&)[3] #0 Foam::error::printStack(Foam::Ostream&)[4] [5] #0 Foam::error::printStack(Foam::Ostream&)[6] #0 Foam::error::printStack(Foam::Ostream&)#0 Foam::error::printStack(Foam::Ostream&) at ??:?
at ??:?
at ??:?
[5] #1 Foam::sigFpe::sigHandler(int)[1] #1 Foam::sigFpe::sigHandler(int)[2] #1 Foam::sigFpe::sigHandler(int) at ??:?
[4] #1 Foam::sigFpe::sigHandler(int) at ??:?
[0] #1 Foam::sigFpe::sigHandler(int) at ??:?
[6] # at ??:?
1 Foam::sigFpe::sigHandler(int) at ??:?
[1] #2 ? at ??:?
[7] #1 Foam::sigFpe::sigHandler(int) at ??:?
[3] #1 Foam::sigFpe::sigHandler(int) at ??:?
[5] #2 ?[2] #2 ? in "/lib/x86_64-linux-gnu/libc.so.6"
[1] #3 Foam::turbineModels::horizontalAxisWindTurbinesALMAdvanced::computeBladePointForce() at ??:?
[4] #2 ? in "/lib/x86_64-linux-gnu/libc.so.6"
[5] #3 Foam::turbineModels::horizontalAxisWindTurbinesALMAdvanced::computeBladePointForce() at ??:?
[0] #2 ? in "/lib/x86_64-linux-gnu/libc.so.6"
[2] #3 Foam::turbineModels::horizontalAxisWindTurbinesALMAdvanced::computeBladePointForce() at ??:?
[6] #2 ? in "/lib/x86_64-linux-gnu/libc.so.6"
[4] #3 Foam::turbineModels::horizontalAxisWindTurbinesALMAdvanced::computeBladePointForce() at ??:?
[7] #2 ? at ??:?
[1] #4 at ??:?
Foam::turbineModels::horizontalAxisWindTurbinesALMAdvanced::horizontalAxisWindTurbinesALMAdvanced(Foam::GeometricField<Foam::Vector, Foam::fvPatchField, Foam::volMesh> const&)[5] #4 Foam::turbineModels::horizontalAxisWindTurbinesALMAdvanced::horizontalAxisWindTurbinesALMAdvanced(Foam::GeometricField<Foam::Vector, Foam::fvPatchField, Foam::volMesh> const&) in "/lib/x86_64-linux-gnu/libc.so.6"
[0] # at ??:?
[2] #4 Foam::turbineModels::horizontalAxisWindTurbinesALMAdvanced::horizontalAxisWindTurbinesALMAdvanced(Foam::GeometricField<Foam::Vector, Foam::fvPatchField, Foam::volMesh> const&)3 Foam::turbineModels::horizontalAxisWindTurbinesALMAdvanced::computeBladePointForce() in "/lib/x86_64-linux-gnu/libc.so.6"
[6] #3 Foam::turbineModels::horizontalAxisWindTurbinesALMAdvanced::computeBladePointForce() at ??:?
[3] #2 ? at ??:?
[4] #4 Foam::turbineModels::horizontalAxisWindTurbinesALMAdvanced::horizontalAxisWindTurbinesALMAdvanced(Foam::GeometricField<Foam::Vector, Foam::fvPatchField, Foam::volMesh> const&) at ??:?
[1] #5 in at ??:?
[5] #5 at ??:?
[6] #4 at ??:?
Foam::turbineModels::horizontalAxisWindTurbinesALMAdvanced::horizontalAxisWindTurbinesALMAdvanced(Foam::GeometricField<Foam::Vector, Foam::fvPatchField, Foam::volMesh> const&)[2] #5 "/lib/x86_64-linux-gnu/libc.so.6"
at ??:?
[7] #3 [0] #4 Foam::turbineModels::horizontalAxisWindTurbinesALMAdvanced::horizontalAxisWindTurbinesALMAdvanced(Foam::GeometricField<Foam::Vector, Foam::fvPatchField, Foam::volMesh> const&)Foam::turbineModels::horizontalAxisWindTurbinesALMAdvanced::computeBladePointForce() at ??:?
[4] #5 in "/lib/x86_64-linux-gnu/libc.so.6"
[3] #3 Foam::turbineModels::horizontalAxisWindTurbinesALMAdvanced::computeBladePointForce()??? at ??:?
[7] #4 Foam::turbineModels::horizontalAxisWindTurbinesALMAdvanced::horizontalAxisWindTurbinesALMAdvanced(Foam::GeometricField<Foam::Vector, Foam::fvPatchField, Foam::volMesh> const&) at ??:?
[0] #5 at ??:?
[6] #5 ? at ??:?
[3] #4 Foam::turbineModels::horizontalAxisWindTurbinesALMAdvanced::horizontalAxisWindTurbinesALMAdvanced(Foam::GeometricField<Foam::Vector, Foam::fvPatchField, Foam::volMesh> const&) at ??:?
[2] #6 __libc_start_main at ??:?
[1] #6 __libc_start_main? at ??:?
[5] #6 __libc_start_main? at ??:?
[4] #6 __libc_start_main at ??:?
[3] #5 in "/lib/x86_64-linux-gnu/libc.so.6"
[2] #7 at ??:?
[7] #5 at ??:?
[6] #6 __libc_start_main at ??:?
[0] #6 __libc_start_main in "/lib/x86_64-linux-gnu/libc.so.6"
[5] #7 ? in "/lib/x86_64-linux-gnu/libc.so.6"
?[1] #7 ?? in "/lib/x86_64-linux-gnu/libc.so.6"
[4] #7 in "/lib/x86_64-linux-gnu/libc.so.6"
[0] #7 ? at ??:?
[3] #6 __libc_start_main at ??:?
[Jarvis:11080] *** Process received signal ***
[Jarvis:11080] Signal: Floating point exception (8)
[Jarvis:11080] Signal code: (-6)
[Jarvis:11080] Failing at address: 0x3e800002b48
at ??:?
[7] #6 __libc_start_main in "/lib/x86_64-linux-gnu/libc.so.6"
[6] #7 [Jarvis:11080] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x36d40) [0x7f0b3fb4dd40]
[Jarvis:11080] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x39) [0x7f0b3fb4dcc9]
[Jarvis:11080] [ 2] /lib/x86_64-linux-gnu/libc.so.6(+0x36d40) [0x7f0b3fb4dd40]
[Jarvis:11080] [ 3] /home/gordon/OpenFOAM/gordon-2.4.0/platforms/linux64GccDPOpt/lib/libuserTurbineModelsStandard.so(_ZN4Foam13turbineModels37horizontalAxisWindTurbinesALMAdvanced22computeBladePointForceEv+0xd3c) [0x7f0b4382b5cc]
[Jarvis:11080] [ 4] /home/gordon/OpenFOAM/gordon-2.4.0/platforms/linux64GccDPOpt/lib/libuserTurbineModelsStandard.so(_ZN4Foam13turbineModels37horizontalAxisWindTurbinesALMAdvancedC1ERKNS_14GeometricFieldINS_6VectorIdEENS_12fvPatchFieldENS_7volMeshEEE+0xbaac) [0x7f0b438486ac]
[Jarvis:11080] [ 5] windPlantSolver.ALMAdvanced() [0x42f92b]
[Jarvis:11080] [ 6] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf5) [0x7f0b3fb38ec5]
[Jarvis:11080] [ 7] windPlantSolver.ALMAdvanced() [0x43cc31]
[Jarvis:11080] *** End of error message ***
?? at ??:?
[Jarvis:11083] *** Process received signal ***
[Jarvis:11083] Signal: Floating point exception (8)
[Jarvis:11083] Signal code: (-6)
[Jarvis:11083] Failing at address: 0x3e800002b4b
[Jarvis:11083] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x36d40) [0x7f8e54144d40]
[Jarvis:11083] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x39) [0x7f8e54144cc9]
[Jarvis:11083] [ 2] /lib/x86_64-linux-gnu/libc.so.6(+0x36d40) [0x7f8e54144d40]
[Jarvis:11083] [ 3] /home/gordon/OpenFOAM/gordon-2.4.0/platforms/linux64GccDPOpt/lib/libuserTurbineModelsStandard.so(_ZN4Foam13turbineModels37horizontalAxisWindTurbinesALMAdvanced22computeBladePointForceEv+0xd3c) [0x7f8e57e225cc]
[Jarvis:11083] [ 4] /home/gordon/OpenFOAM/gordon-2.4.0/platforms/linux64GccDPOpt/lib/libuserTurbineModelsStandard.so(_ZN4Foam13turbineModels37horizontalAxisWindTurbinesALMAdvancedC1ERKNS_14GeometricFieldINS_6VectorIdEENS_12fvPatchFieldENS_7volMeshEEE+0xbaac) [0x7f8e57e3f6ac]
[Jarvis:11083] [ 5] windPlantSolver.ALMAdvanced() [0x42f92b]
[Jarvis:11083] [ 6] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf5) [0x7f8e5412fec5]
[Jarvis:11083] [ 7] windPlantSolver.ALMAdvanced() [0x43cc31]
[Jarvis:11083] *** End of error message ***
in "/lib/x86_64-linux-gnu/libc.so.6"
[3] #7 at ??:?
[Jarvis:11079] *** Process received signal ***
[Jarvis:11079] Signal: Floating point exception (8)
[Jarvis:11079] Signal code: (-6)
[Jarvis:11079] Failing at address: 0x3e800002b47
[Jarvis:11079] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x36d40) [0x7f9cf7d8fd40]
[Jarvis:11079] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x39) [0x7f9cf7d8fcc9]
[Jarvis:11079] [ 2] /lib/x86_64-linux-gnu/libc.so.6(+0x36d40) [0x7f9cf7d8fd40]
[Jarvis:11079] [ 3] /home/gordon/OpenFOAM/gordon-2.4.0/platforms/linux64GccDPOpt/lib/libuserTurbineModelsStandard.so(_ZN4Foam13turbineModels37horizontalAxisWindTurbinesALMAdvanced22computeBladePointForceEv+0xd3c) [0x7f9cfba6d5cc]
[Jarvis:11079] [ 4] /home/gordon/OpenFOAM/gordon-2.4.0/platforms/linux64GccDPOpt/lib/libuserTurbineModelsStandard.so(_ZN4Foam13turbineModels37horizontalAxisWindTurbinesALMAdvancedC1ERKNS_14GeometricFieldINS_6VectorIdEENS_12fvPatchFieldENS_7volMeshEEE+0xbaac) [0x7f9cfba8a6ac]
[Jarvis:11079] [ 5] windPlantSolver.ALMAdvanced() [0x42f92b]
[Jarvis:11079] [ 6] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf5) [0x7f9cf7d7aec5]
[Jarvis:11079] [ 7] windPlantSolver.ALMAdvanced() [0x43cc31]
[Jarvis:11079] *** End of error message ***
in "/lib/x86_64-linux-gnu/libc.so.6"
[7] #7 ? at ??:?
[Jarvis:11078] *** Process received signal ***
[Jarvis:11078] Signal: Floating point exception (8)
[Jarvis:11078] Signal code: (-6)
[Jarvis:11078] Failing at address: 0x3e800002b46
[Jarvis:11078] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x36d40) [0x7f3d56cd7d40]
[Jarvis:11078] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x39) [0x7f3d56cd7cc9]
[Jarvis:11078] [ 2] /lib/x86_64-linux-gnu/libc.so.6(+0x36d40) [0x7f3d56cd7d40]
[Jarvis:11078] [ 3] /home/gordon/OpenFOAM/gordon-2.4.0/platforms/linux64GccDPOpt/lib/libuserTurbineModelsStandard.so(_ZN4Foam13turbineModels37horizontalAxisWindTurbinesALMAdvanced22computeBladePointForceEv+0xd3c) [0x7f3d5a9b55cc]
[Jarvis:11078] [ 4] /home/gordon/OpenFOAM/gordon-2.4.0/platforms/linux64GccDPOpt/lib/libuserTurbineModelsStandard.so(_ZN4Foam13turbineModels37horizontalAxisWindTurbinesALMAdvancedC1ERKNS_14GeometricFieldINS_6VectorIdEENS_12fvPatchFieldENS_7volMeshEEE+0xbaac) [0x7f3d5a9d26ac]
[Jarvis:11078] [ 5] windPlantSolver.ALMAdvanced() [0x42f92b]
[Jarvis:11078] [ 6] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf5) [0x7f3d56cc2ec5]
[Jarvis:11078] [ 7] windPlantSolver.ALMAdvanced() [0x43cc31]
[Jarvis:11078] *** End of error message ***
at ??:?
[Jarvis:11082] *** Process received signal ***
[Jarvis:11082] Signal: Floating point exception (8)
[Jarvis:11082] Signal code: (-6)
[Jarvis:11082] Failing at address: 0x3e800002b4a
[Jarvis:11082] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x36d40) [0x7f8b09098d40]
[Jarvis:11082] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x39) [0x7f8b09098cc9]
[Jarvis:11082] [ 2] /lib/x86_64-linux-gnu/libc.so.6(+0x36d40) [0x7f8b09098d40]
[Jarvis:11082] [ 3] /home/gordon/OpenFOAM/gordon-2.4.0/platforms/linux64GccDPOpt/lib/libuserTurbineModelsStandard.so(_ZN4Foam13turbineModels37horizontalAxisWindTurbinesALMAdvanced22computeBladePointForceEv+0xd3c) [0x7f8b0cd765cc]
[Jarvis:11082] [ 4] /home/gordon/OpenFOAM/gordon-2.4.0/platforms/linux64GccDPOpt/lib/libuserTurbineModelsStandard.so(_ZN4Foam13turbineModels37horizontalAxisWindTurbinesALMAdvancedC1ERKNS_14GeometricFieldINS_6VectorIdEENS_12fvPatchFieldENS_7volMeshEEE+0xbaac) [0x7f8b0cd936ac]
[Jarvis:11082] [ 5] windPlantSolver.ALMAdvanced() [0x42f92b]
[Jarvis:11082] [ 6] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf5) [0x7f8b09083ec5]
[Jarvis:11082] [ 7] windPlantSolver.ALMAdvanced() [0x43cc31]
[Jarvis:11082] *** End of error message ***
? at ??:?
[Jarvis:11081] *** Process received signal ***
[Jarvis:11081] Signal: Floating point exception (8)
[Jarvis:11081] Signal code: (-6)
[Jarvis:11081] Failing at address: 0x3e800002b49
[Jarvis:11081] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x36d40) [0x7f9cfcae7d40]
[Jarvis:11081] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x39) [0x7f9cfcae7cc9]
[Jarvis:11081] [ 2] /lib/x86_64-linux-gnu/libc.so.6(+0x36d40) [0x7f9cfcae7d40]
[Jarvis:11081] [ 3] /home/gordon/OpenFOAM/gordon-2.4.0/platforms/linux64GccDPOpt/lib/libuserTurbineModelsStandard.so(_ZN4Foam13turbineModels37horizontalAxisWindTurbinesALMAdvanced22computeBladePointForceEv+0xd3c) [0x7f9d007c55cc]
[Jarvis:11081] [ 4] /home/gordon/OpenFOAM/gordon-2.4.0/platforms/linux64GccDPOpt/lib/libuserTurbineModelsStandard.so(_ZN4Foam13turbineModels37horizontalAxisWindTurbinesALMAdvancedC1ERKNS_14GeometricFieldINS_6VectorIdEENS_12fvPatchFieldENS_7volMeshEEE+0xbaac) [0x7f9d007e26ac]
[Jarvis:11081] [ 5] windPlantSolver.ALMAdvanced() [0x42f92b]
[Jarvis:11081] [ 6] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf5) [0x7f9cfcad2ec5]
[Jarvis:11081] [ 7] windPlantSolver.ALMAdvanced() [0x43cc31]
[Jarvis:11081] *** End of error message ***
? at ??:?
[Jarvis:11084] *** Process received signal ***
[Jarvis:11084] Signal: Floating point exception (8)
[Jarvis:11084] Signal code: (-6)
[Jarvis:11084] Failing at address: 0x3e800002b4c
[Jarvis:11084] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x36d40) [0x7fe4f87b1d40]
[Jarvis:11084] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x39) [0x7fe4f87b1cc9]
[Jarvis:11084] [ 2] /lib/x86_64-linux-gnu/libc.so.6(+0x36d40) [0x7fe4f87b1d40]
[Jarvis:11084] [ 3] /home/gordon/OpenFOAM/gordon-2.4.0/platforms/linux64GccDPOpt/lib/libuserTurbineModelsStandard.so(_ZN4Foam13turbineModels37horizontalAxisWindTurbinesALMAdvanced22computeBladePointForceEv+0xd3c) [0x7fe4fc48f5cc]
[Jarvis:11084] [ 4] /home/gordon/OpenFOAM/gordon-2.4.0/platforms/linux64GccDPOpt/lib/libuserTurbineModelsStandard.so(_ZN4Foam13turbineModels37horizontalAxisWindTurbinesALMAdvancedC1ERKNS_14GeometricFieldINS_6VectorIdEENS_12fvPatchFieldENS_7volMeshEEE+0xbaac) [0x7fe4fc4ac6ac]
[Jarvis:11084] [ 5] windPlantSolver.ALMAdvanced() [0x42f92b]
[Jarvis:11084] [ 6] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf5) [0x7fe4f879cec5]
[Jarvis:11084] [ 7] windPlantSolver.ALMAdvanced() [0x43cc31]
[Jarvis:11084] *** End of error message ***
at ??:?
[Jarvis:11085] *** Process received signal ***
[Jarvis:11085] Signal: Floating point exception (8)
[Jarvis:11085] Signal code: (-6)
[Jarvis:11085] Failing at address: 0x3e800002b4d
[Jarvis:11085] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x36d40) [0x7fac1a07ad40]
[Jarvis:11085] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x39) [0x7fac1a07acc9]
[Jarvis:11085] [ 2] /lib/x86_64-linux-gnu/libc.so.6(+0x36d40) [0x7fac1a07ad40]
[Jarvis:11085] [ 3] /home/gordon/OpenFOAM/gordon-2.4.0/platforms/linux64GccDPOpt/lib/libuserTurbineModelsStandard.so(_ZN4Foam13turbineModels37horizontalAxisWindTurbinesALMAdvanced22computeBladePointForceEv+0xd3c) [0x7fac1dd585cc]
[Jarvis:11085] [ 4] /home/gordon/OpenFOAM/gordon-2.4.0/platforms/linux64GccDPOpt/lib/libuserTurbineModelsStandard.so(_ZN4Foam13turbineModels37horizontalAxisWindTurbinesALMAdvancedC1ERKNS_14GeometricFieldINS_6VectorIdEENS_12fvPatchFieldENS_7volMeshEEE+0xbaac) [0x7fac1dd756ac]
[Jarvis:11085] [ 5] windPlantSolver.ALMAdvanced() [0x42f92b]
[Jarvis:11085] [ 6] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf5) [0x7fac1a065ec5]
[Jarvis:11085] [ 7] windPlantSolver.ALMAdvanced() [0x43cc31]
[Jarvis:11085] *** End of error message ***

mpirun noticed that process rank 2 with PID 11080 on node Jarvis exited on signal 8 (Floating point exception).

2 total processes killed (some possibly by mpirun during cleanup)

@Cookiewyf
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Hello! I met the same problem when I run ALM and ALMAdvanced,it looks like a openfoam problem related to mesh. Have you solved this?

@usellllzxcv
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Hello! I met the same problem when I run ALM and ALMAdvanced,it looks like a openfoam problem related to mesh. Have you solved this?

Sorry, I haven't solved the problem yet.

@Zhang-Zhaoyu
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Hi! Do you have the solution now? I got the same error.

@fengbao520
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Hello, how to run ABL arithmetic in sowfa-6? It doesn't feel the same as sowfa-2.4.

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@Cookiewyf @Zhang-Zhaoyu @usellllzxcv @fengbao520