codecov.yml

name: Codecov

on: pull_request

jobs:
  run:
    runs-on: ${{ matrix.os }}
    strategy:
      fail-fast: false
      matrix:
        os: [ubuntu-latest]
        python-version: ['3.9']
    steps:
    - name: checkout nsrdb
      uses: actions/checkout@v2
      with:
        ref: ${{ github.event.pull_request.head.ref }}
        path: nsrdb
    - name: checkout mlclouds
      uses: actions/checkout@v2
      with:
        repository: nrel/mlclouds
        ssh-key: ${{ secrets.SSH_KEY }}
        path: mlclouds
    - name: checkout rest2
      uses: actions/checkout@v2
      with:
        repository: nrel/rest2
        ssh-key: ${{ secrets.SSH_KEY }}
        path: rest2
    - name: Set up Python ${{ matrix.python-version }}
      uses: conda-incubator/setup-miniconda@v2
      with:
        auto-update-conda: true
        python-version: ${{ matrix.python-version }}
    - name: Install rest2 dependencies
      working-directory: ./rest2
      shell: bash -l {0}
      run: |
        conda install pip
        pip install -e .
    - name: Install nsrdb dependencies
      working-directory: ./nsrdb
      shell: bash -l {0}
      run: |
        conda install hdf4
        conda install -c conda-forge pyhdf
        pip install -e .
    - name: Install mlclouds dependencies
      working-directory: ./mlclouds
      shell: bash -l {0}
      run: |
        pip install -e .
    - name: Install codecov dependencies
      run: |
        python -m pip install --upgrade pip
        python -m pip install pytest
        python -m pip install pytest-cov
        python -m pip install .
    - name: Generate coverage report
      run: |
        python -m  pytest --cov=./ --cov-report=xml:coverage.xml
    - name: Upload coverage to Codecov
      uses: codecov/codecov-action@v1
      with:
        token: ${{ secrets.CODECOV_TOKEN }}
        file: ./coverage.xml
        flags: unittests
        env_vars: OS,PYTHON
        name: codecov-umbrella
        fail_ci_if_error: false
        verbose: true