diff --git a/docs/docs/designer/usage.md b/docs/docs/designer/usage.md index 5debffd..5456418 100644 --- a/docs/docs/designer/usage.md +++ b/docs/docs/designer/usage.md @@ -171,7 +171,7 @@ Olesen, J. L., Ianus, A., Østergaard, L., Shemesh, N., & Jespersen, S. N. (2023 - Runs volume-to-volume registration for each DWI image using a mutual information cost function and b-spline interpolation. ### `-eddy_quad_output ` -- eddy_quad (QC report) will run after -eddy +- `eddy_quad` (QC report) will run after `-eddy` - Path to a not yet existing folder you want to save eddy_quad output to. - By default, it will save to the scratch (use `-nocleanup` to save scratch directory) directory (path/to/scratch/eddy_processing/dwi_post_eddy.qc)