v1.3.9

What's Changed

• Visualization: handle referenced morphologies by @sanjayankur31 in #415
• PR 407 + tweaks by @sanjayankur31 in #421
• Feat/export swc:- This aims to add a file which exports SWC file into neuroml. by @AdityaBITMESRA in #407

Full Changelog: v1.3.8...v1.3.9

v1.3.8

What's Changed

• To v1.3.8; allows xml or sbml files to be validated as SBML by @pgleeson in #419

Full Changelog: v1.3.7...v1.3.8

v1.3.7

What's Changed

• docs: add lej0hn as a contributor for bug, and ideas by @allcontributors in #322
• docs: add Dhruvanshu-Joshi as a contributor for bug, and ideas by @allcontributors in #323
• docs: add AdityaBITMESRA as a contributor for bug, and ideas by @allcontributors in #324
• docs: add YBCS as a contributor for code by @allcontributors in #331
• docs: add lej0hn as a contributor for review by @allcontributors in #363
• docs: add YBCS as a contributor for code, and test by @allcontributors in #364
• docs: add lej0hn as a contributor for code by @allcontributors in #370
• fix(setup.cfg): include template channel file in data by @sanjayankur31 in #378
• docs: add AdityaBITMESRA as a contributor for code, and review by @allcontributors in #381
• docs: add stellaprins as a contributor for code, and ideas by @allcontributors in #409
• Improve checks to ensure that the right input files are provided for each pynml command by @sanjayankur31 in #413
• Changes from master merged in by @pgleeson in #416
• To v1.3.7 & use jnml v0.13.3 by @pgleeson in #417

Full Changelog: v1.3.5...v1.3.7

v1.3.5

What's Changed

• fix(moose): correct math operator by @sanjayankur31 in #411

Full Changelog: v1.3.4...v1.3.5

v1.3.4

What's Changed

• Review of #384 with a few tweaks by @sanjayankur31 in #400
• Feat/swc loaderfile Adding SWC loader to load SWC file by @AdityaBITMESRA in #384
• add downloads URL as biosimulations.submit_simulation_archive return value by @stellaprins in #401
• feat/Make 3d visualization compatibile with jupyter notebooks by @lej0hn in #399
• Feat/export swc-Adds function to export SWC graph to a new SWC file by @AdityaBITMESRA in #404

New Contributors

• @AdityaBITMESRA made their first contribution in #384
• @stellaprins made their first contribution in #401

Full Changelog: v1.3.3...v1.3.4

v1.3.3

What's Changed

• Feature Draft/ Use PCA to visualize cell 'upwards' by @lej0hn in #379
• Support visualisation of morphology only files by @sanjayankur31 in #398

Full Changelog: v1.3.2...v1.3.3

v1.3.2

What's Changed

• ci: tweak pip command by @sanjayankur31 in #394
• Deps and CI fixes by @sanjayankur31 in #395
• To v1.3.2 and use jnml v0.13.2; pinning numpy<2.0 by @pgleeson in #396

Full Changelog: v1.3.0...v1.3.2

v1.3.0

What's Changed

• Added translate_cell function by @lej0hn in #367
• Annotations: completes exporting and extraction of annotations that we use in NeuroML by @sanjayankur31 in #354
• chore: improve contributing documentation by @sanjayankur31 in #371
• Feat/get ks channel states by @sanjayankur31 in #373
• Feat/plotting checks by @sanjayankur31 in #374
• issue 303: plot spikes by @sanjayankur31 in #377
• Feat/make generate plot clicky by @sanjayankur31 in #382
• chore: linter fixes by @sanjayankur31 in #383
• Feat/coverage by @sanjayankur31 in #386
• ci: add coverage to pull requests by @sanjayankur31 in #387
• Add bqbiol.is by @sanjayankur31 in #390
• ci: update comment bit to also work on PRs from forks by @sanjayankur31 in #391
• Use jnml jar 0.13.1; fixes to allow for cells with external morphology/biophysicalProperties by @pgleeson in #392

New Contributors

• @lej0hn made their first contribution in #367

Full Changelog: v1.2.14...v1.3.0

v1.2.14

Full Changelog: v1.2.13...v1.2.14

• bugfix: adds progressbar as a default dependency

v1.2.13

What's Changed

• feat(annotations): improve for use as embedded annotations by @sanjayankur31 in #350
• More annotation tweaks: remove unused ids, use rdf:li by @sanjayankur31 in #353
• fix(nml-channel-analysis): include ionChannelVShift by @sanjayankur31 in #356
• Updates to xpp running/plotting by @pgleeson in #355
• feat(rotation): allow users to pick if they want a copy by @sanjayankur31 in #361
• animate matplotlib plots by @YBCS in #348
• Feat/test animate plots by @sanjayankur31 in #365
• feat(pynml-modchananalysis): add labels and fix file name by @sanjayankur31 in #352
• Better handling of nested if statements in xpp parser by @pgleeson in #368

Full Changelog: v1.2.12...v1.2.13