diff --git a/.git-blame-ignore-revs b/.git-blame-ignore-revs
index 9b7cb3c036..e14ce11599 100644
--- a/.git-blame-ignore-revs
+++ b/.git-blame-ignore-revs
@@ -1,4 +1,5 @@
# Ran python directory through black python formatter
+d229b5c6689efc4c2a6cef077515c4ccd5c18ff6
4cd83cb3ee6d85eb909403487abf5eeaf4d98911
0aa2957c1f8603c63fa30b11295c06cfddff44a5
2cdb380febb274478e84cd90945aee93f29fa2e6
@@ -10,6 +11,11 @@ b88e1cd1b28e3609684c79a2ec0e88f26cfc362b
b771971e3299c4fa56534b93421f7a2b9c7282fd
9de88bb57ea9855da408cbec1dc8acb9079eda47
8bc4688e52ea23ef688e283698f70a44388373eb
+0a5a9e803b56ec1bbd6232eff1c99dbbeef25eb7
+810cb346f05ac1aabfff931ab1a2b7b584add241
+5933b0018f8e29413e30dda9b906370d147bad45
# Ran SystemTests and python/ctsm through black python formatter
5364ad66eaceb55dde2d3d598fe4ce37ac83a93c
8056ae649c1b37f5e10aaaac79005d6e3a8b2380
+540b256d1f3382f4619d7b0877c32d54ce5c40b6
+8a168bb0895f4f2421608dd2589398e13a6663e6
diff --git a/bld/CLMBuildNamelist.pm b/bld/CLMBuildNamelist.pm
index 72c3b1b74a..2136cfc05c 100755
--- a/bld/CLMBuildNamelist.pm
+++ b/bld/CLMBuildNamelist.pm
@@ -4413,7 +4413,7 @@ sub setup_logic_misc {
add_default($opts, $nl_flags->{'inputdata_rootdir'}, $definition, $defaults, $nl, 'for_testing_use_second_grain_pool');
add_default($opts, $nl_flags->{'inputdata_rootdir'}, $definition, $defaults, $nl, 'for_testing_use_repr_structure_pool');
add_default($opts, $nl_flags->{'inputdata_rootdir'}, $definition, $defaults, $nl, 'for_testing_no_crop_seed_replenishment');
- add_default($opts, $nl_flags->{'inputdata_rootdir'}, $definition, $defaults, $nl, 'hist_master_list_file');
+ add_default($opts, $nl_flags->{'inputdata_rootdir'}, $definition, $defaults, $nl, 'hist_fields_list_file');
}
#-------------------------------------------------------------------------------
diff --git a/bld/namelist_files/namelist_defaults_ctsm.xml b/bld/namelist_files/namelist_defaults_ctsm.xml
index 88b2947b10..68e38117be 100644
--- a/bld/namelist_files/namelist_defaults_ctsm.xml
+++ b/bld/namelist_files/namelist_defaults_ctsm.xml
@@ -67,8 +67,8 @@ attributes from the config_cache.xml file (with keys converted to upper-case).
.false..false.
-
-.false.
+
+.false..true.
diff --git a/bld/namelist_files/namelist_definition_ctsm.xml b/bld/namelist_files/namelist_definition_ctsm.xml
index 22ea6a4c3c..9a0663c34f 100644
--- a/bld/namelist_files/namelist_definition_ctsm.xml
+++ b/bld/namelist_files/namelist_definition_ctsm.xml
@@ -764,9 +764,9 @@ SNICAR (SNow, ICe, and Aerosol Radiative model) optical data file name
SNICAR (SNow, ICe, and Aerosol Radiative model) snow aging data file name
-
-If TRUE, write master field list to separate file for documentation purposes
+If TRUE, write list of all output fields to separate file for documentation purposes
-
+
@@ -2594,7 +2594,7 @@
-
+
diff --git a/cime_config/testdefs/testmods_dirs/clm/FatesColdCH4Off/user_nl_clm b/cime_config/testdefs/testmods_dirs/clm/FatesColdCH4Off/user_nl_clm
index 4d7617fed4..9f977ac5ce 100644
--- a/cime_config/testdefs/testmods_dirs/clm/FatesColdCH4Off/user_nl_clm
+++ b/cime_config/testdefs/testmods_dirs/clm/FatesColdCH4Off/user_nl_clm
@@ -1,2 +1,2 @@
use_lch4 = .false.
-hist_master_list_file = .true.
+hist_fields_list_file = .true.
diff --git a/cime_config/testdefs/testmods_dirs/clm/SaveHistFieldList/user_nl_clm b/cime_config/testdefs/testmods_dirs/clm/SaveHistFieldList/user_nl_clm
new file mode 100644
index 0000000000..4791cd28b2
--- /dev/null
+++ b/cime_config/testdefs/testmods_dirs/clm/SaveHistFieldList/user_nl_clm
@@ -0,0 +1 @@
+hist_fields_list_file = .true.
diff --git a/cime_config/testdefs/testmods_dirs/clm/extra_outputs/README b/cime_config/testdefs/testmods_dirs/clm/extra_outputs/README
index 03bc956b6f..574d7cc204 100644
--- a/cime_config/testdefs/testmods_dirs/clm/extra_outputs/README
+++ b/cime_config/testdefs/testmods_dirs/clm/extra_outputs/README
@@ -1,4 +1,4 @@
This test mod turns on extra diagnostic fields
-It also outputs an optional text file containing a table of the
-history fields master list
+It also outputs an optional text file containing a table of all
+the possible history fields
diff --git a/cime_config/testdefs/testmods_dirs/clm/extra_outputs/user_nl_clm b/cime_config/testdefs/testmods_dirs/clm/extra_outputs/user_nl_clm
index 6dc5225f1d..dad8a7e843 100644
--- a/cime_config/testdefs/testmods_dirs/clm/extra_outputs/user_nl_clm
+++ b/cime_config/testdefs/testmods_dirs/clm/extra_outputs/user_nl_clm
@@ -1,5 +1,5 @@
calc_human_stress_indices = 'ALL'
-hist_master_list_file = .true.
+hist_fields_list_file = .true.
hist_fincl1 += 'GSSUN:L43200', 'GSSHA:L43200', 'FSDSND:L43200', 'FSRND:L43200', 'FSRSFND:L43200',
'SSRE_FSRND:L43200', 'FSDSVD:L43200', 'FSDSVI:L43200',
diff --git a/doc/ChangeLog b/doc/ChangeLog
index 518e2b59cb..8e8a99b868 100644
--- a/doc/ChangeLog
+++ b/doc/ChangeLog
@@ -1,4 +1,77 @@
===============================================================
+Tag name: ctsm5.1.dev142
+Originator(s): samrabin (Sam Rabin, UCAR/TSS, samrabin@ucar.edu)
+Date: Tue Sep 19 11:30:22 MDT 2023
+One-line Summary: Merge 5 bit-for-bit pull requests
+
+Purpose and description of changes
+----------------------------------
+
+Merge 5 bit-for-bit pull requests; see "Other details."
+
+
+Significant changes to scientifically-supported configurations
+--------------------------------------------------------------
+
+Does this tag change answers significantly for any of the following physics configurations?
+(Details of any changes will be given in the "Answer changes" section below.)
+
+[ ] clm5_1
+
+[ ] clm5_0
+
+[ ] ctsm5_0-nwp
+
+[ ] clm4_5
+
+
+Bugs fixed or introduced
+------------------------
+CTSM issues fixed (include CTSM Issue #):
+* Add unit test for making fsurdat with all crops everywhere (#2079)
+* Rework master_list_(no)?fates.rst? (#2083)
+* conda run -n can fail if a conda environment is already active (#2109)
+* conda fails to load for SystemTests (#2111)
+
+
+Notes of particular relevance for developers:
+---------------------------------------------
+Changes to tests or testing:
+* FSURDATMODIFYCTSM system test should now work for everyone.
+
+
+Testing summary:
+----------------
+
+ [PASS means all tests PASS; OK means tests PASS other than expected fails.]
+
+ build-namelist tests (if CLMBuildNamelist.pm has changed):
+
+ cheyenne - PASS
+
+ python testing (if python code has changed; see instructions in python/README.md; document testing done):
+
+ cheyenne - PASS
+ clm_pymods test suite on cheyenne - PASS
+
+ regular tests (aux_clm: https://github.com/ESCOMP/CTSM/wiki/System-Testing-Guide#pre-merge-system-testing):
+
+ cheyenne ---- OK
+ izumi ------- OK
+
+
+Other details
+-------------
+
+Pull Requests that document the changes (include PR ids):
+* Add system and unit tests for making fsurdat with all crops everywhere (#2081)
+* Rework master_list* files etc. (#2087)
+* Fixes to methane Tech Note (#2091)
+* Add is_doy_in_interval() function (#2158)
+* Avoid using subprocess.run() in FSURDATMODIFYCTSM (#2125)
+
+===============================================================
+===============================================================
Tag name: ctsm5.1.dev141
Originator(s): slevis (Samuel Levis,UCAR/TSS,303-665-1310)
Date: Wed Sep 13 13:58:04 MDT 2023
diff --git a/doc/ChangeSum b/doc/ChangeSum
index 95a0285551..e11f439658 100644
--- a/doc/ChangeSum
+++ b/doc/ChangeSum
@@ -1,5 +1,6 @@
Tag Who Date Summary
============================================================================================================================
+ ctsm5.1.dev142 samrabin 09/19/2023 Merge 5 bit-for-bit pull requests
ctsm5.1.dev141 slevis 09/13/2023 Change small snocan to zero
ctsm5.1.dev140 afoster 09/12/2023 add lai_streams capability for FATES
ctsm5.1.dev139 slevis 08/28/2023 Fix problems uncovered by nag -nan tests
diff --git a/doc/source/tech_note/Methane/CLM50_Tech_Note_Methane.rst b/doc/source/tech_note/Methane/CLM50_Tech_Note_Methane.rst
index 7c89f857e3..875689558b 100644
--- a/doc/source/tech_note/Methane/CLM50_Tech_Note_Methane.rst
+++ b/doc/source/tech_note/Methane/CLM50_Tech_Note_Methane.rst
@@ -66,7 +66,7 @@ phases:\ :math:`R = \epsilon _{a} +K_{H} \epsilon _{w}`, with
porosity, and partitioning coefficient for the species of interest,
respectively, and :math:`C` represents CH\ :sub:`4` or O\ :sub:`2` concentration with respect to water volume (mol m\ :sup:`-3`).
-An analogous version of equation is concurrently solved for
+An analogous version of equation :eq:`24.1` is concurrently solved for
O\ :sub:`2`, but with the following differences relative to
CH\ :sub:`4`: *P* = *E* = 0 (i.e., no production or ebullition),
and the oxidation sink includes the O\ :sub:`2` demanded by
@@ -74,7 +74,7 @@ methanotrophs, heterotroph decomposers, nitrifiers, and autotrophic root
respiration.
As currently implemented, each gridcell contains an inundated and a
-non-inundated fraction. Therefore, equation is solved four times for
+non-inundated fraction. Therefore, equation :eq:`24.1` is solved four times for
each gridcell and time step: in the inundated and non-inundated
fractions, and for CH\ :sub:`4` and O\ :sub:`2`. If desired,
the CH\ :sub:`4` and O\ :sub:`2` mass balance equation is
@@ -173,9 +173,9 @@ anoxic microsites above the water table, we apply the Arah and Stephen
\varphi =\frac{1}{1+\eta C_{O_{2} } } .
-Here, :math:`\phi` is the factor by which production is inhibited
+Here, :math:`\varphi` is the factor by which production is inhibited
above the water table (compared to production as calculated in equation
-, :math:`C_{O_{2}}` (mol m\ :sup:`-3`) is the bulk soil oxygen
+:eq:`24.2`, :math:`C_{O_{2}}` (mol m\ :sup:`-3`) is the bulk soil oxygen
concentration, and :math:`\eta` = 400 mol m\ :sup:`-3`.
The O\ :sub:`2` required to facilitate the vertically resolved
@@ -259,8 +259,8 @@ aqueous CH\ :sub:`4` concentration, and *p* is pressure.
The local pressure is calculated as the sum of the ambient pressure,
water pressure down to the local depth, and pressure from surface
ponding (if applicable). When the CH\ :sub:`4` partial pressure
-exceeds 15% of the local pressure (Baird et al. 2004; Strack et al.
-2006; Wania et al. 2010), bubbling occurs to remove CH\ :sub:`4`
+exceeds 15% of the local pressure (:ref:`Baird et al. 2004`; :ref:`Strack et al.
+2006`; :ref:`Wania et al. 2010`), bubbling occurs to remove CH\ :sub:`4`
to below this value, modified by the fraction of CH\ :sub:`4` in
the bubbles [taken as 57%; (:ref:`Kellner et al. 2006`;
:ref:`Wania et al. 2010`)].
@@ -286,14 +286,14 @@ The diffusive transport through aerenchyma (*A*, mol m\ :sup:`-2` s\ :sup:`-1`)
A=\frac{C\left(z\right)-C_{a} }{{\raise0.7ex\hbox{$ r_{L} z $}\!\mathord{\left/ {\vphantom {r_{L} z D}} \right. \kern-\nulldelimiterspace}\!\lower0.7ex\hbox{$ D $}} +r_{a} } pT\rho _{r} ,
-where *D* is the free-air gas diffusion coefficient (m:sup:`2` s\ :sup:`-1`); *C(z)* (mol m\ :sup:`-3`) is the gaseous
+where *D* is the free-air gas diffusion coefficient (m\ :sup:`2` s\ :sup:`-1`); *C(z)* (mol m\ :sup:`-3`) is the gaseous
concentration at depth *z* (m); :math:`r_{L}` is the ratio of root
length to depth; *p* is the porosity (-); *T* is specific aerenchyma
-area (m:sup:`2` m\ :sup:`-2`); :math:`{r}_{a}` is the
+area (m\ :sup:`2` m\ :sup:`-2`); :math:`{r}_{a}` is the
aerodynamic resistance between the surface and the atmospheric reference
-height (s m:sup:`-1`); and :math:`\rho _{r}` is the rooting
+height (s m\ :sup:`-1`); and :math:`\rho _{r}` is the rooting
density as a function of depth (-). The gaseous concentration is
-calculated with Henry’s law as described in equation .
+calculated with Henry’s law as described in equation :eq:`24.7`.
Based on the ranges reported in :ref:`Colmer (2003)`, we have chosen
baseline aerenchyma porosity values of 0.3 for grass and crop PFTs and 0.1 for
@@ -310,7 +310,7 @@ m\ :sup:`-2` s\ :sup:`-1`); *R* is the aerenchyma radius
belowground fraction of annual NPP; and the 0.22 factor represents the
amount of C per tiller. O\ :sub:`2` can also diffuse in from the
atmosphere to the soil layer via the reverse of the same pathway, with
-the same representation as Equation but with the gas diffusivity of
+the same representation as Equation :eq:`24.8` but with the gas diffusivity of
oxygen.
CLM also simulates the direct emission of CH\ :sub:`4` from leaves
@@ -358,7 +358,7 @@ potential and :math:`{P}_{c} = -2.4 \times {10}^{5}` mm.
Reactive Transport Solution
--------------------------------
-The solution to equation is solved in several sequential steps: resolve
+The solution to equation :eq:`24.11` is solved in several sequential steps: resolve
competition for CH\ :sub:`4` and O\ :sub:`2` (section
:numref:`Competition for CH4and O2`); add the ebullition flux into the
layer directly above the water
@@ -416,7 +416,7 @@ Aqueous and Gaseous Diffusion
For gaseous diffusion, we adopted the temperature dependence of
molecular free-air diffusion coefficients (:math:`{D}_{0}`
-(m:sup:`2` s\ :sup:`-1`)) as described by
+(m\ :sup:`2` s\ :sup:`-1`)) as described by
:ref:`Lerman (1979) ` and applied by
:ref:`Wania et al. (2010)`
(:numref:`Table Temperature dependence of aqueous and gaseous diffusion`).
@@ -426,7 +426,7 @@ molecular free-air diffusion coefficients (:math:`{D}_{0}`
.. table:: Temperature dependence of aqueous and gaseous diffusion coefficients for CH\ :sub:`4` and O\ :sub:`2`
+----------------------------------------------------------+----------------------------------------------------------+--------------------------------------------------------+
- | :math:`{D}_{0}` (m\ :sup:`2` s\ :sup:`-1`) | CH\ :sub:`4` | O\ :sub:`2` |
+ | :math:`{D}_{0}` (cm\ :sup:`2` s\ :sup:`-1`) | CH\ :sub:`4` | O\ :sub:`2` |
+==========================================================+==========================================================+========================================================+
| Aqueous | 0.9798 + 0.02986\ *T* + 0.0004381\ *T*\ :sup:`2` | 1.172+ 0.03443\ *T* + 0.0005048\ *T*\ :sup:`2` |
+----------------------------------------------------------+----------------------------------------------------------+--------------------------------------------------------+
@@ -437,7 +437,7 @@ Gaseous diffusivity in soils also depends on the molecular diffusivity,
soil structure, porosity, and organic matter content.
:ref:`Moldrup et al. (2003)`, using observations across a
range of unsaturated mineral soils, showed that the relationship between
-effective diffusivity (:math:`D_{e}` (m:sup:`2` s\ :sup:`-1`)) and soil
+effective diffusivity (:math:`D_{e}` (m\ :sup:`2` s\ :sup:`-1`)) and soil
properties can be represented as:
.. math::
@@ -457,8 +457,8 @@ measurements more closely in unsaturated peat soils:
D_{e} =D_{0} \frac{\theta _{a} ^{{\raise0.7ex\hbox{$ 10 $}\!\mathord{\left/ {\vphantom {10 3}} \right. \kern-\nulldelimiterspace}\!\lower0.7ex\hbox{$ 3 $}} } }{\theta _{s} ^{2} }
-In CLM, we applied equation for soils with zero organic matter content
-and equation for soils with more than 130 kg m\ :sup:`-3` organic
+In CLM, we applied equation :eq:`24.12` for soils with zero organic matter content
+and equation :eq:`24.13` for soils with more than 130 kg m\ :sup:`-3` organic
matter content. A linear interpolation between these two limits is
applied for soils with SOM content below 130 kg m\ :sup:`-3`. For
aqueous diffusion in the saturated part of the soil column, we applied
@@ -518,10 +518,10 @@ a zero flux gradient at the bottom of the soil column.
Crank-Nicholson Solution
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-Equation is solved using a Crank-Nicholson solution
-(:ref:`Press et al. 1992`),
+Equation :eq:`24.1` is solved using a Crank-Nicholson solution
+(:ref:`Press et al., 1992`),
which combines fully explicit and implicit representations of the mass
-balance. The fully explicit decomposition of equation can be written as
+balance. The fully explicit decomposition of equation :eq:`24.1` can be written as
.. math::
:label: 24.15
@@ -535,11 +535,11 @@ and :math:`S_{j}^{n}` is the net source at time step *n* and position
*j*, i.e.,
:math:`S_{j}^{n} =P\left(j,n\right)-E\left(j,n\right)-A\left(j,n\right)-O\left(j,n\right)`.
The diffusivity coefficients are calculated as harmonic means of values
-from the adjacent cells. Equation is solved for gaseous and aqueous
+from the adjacent cells. Equation :eq:`24.15` is solved for gaseous and aqueous
concentrations above and below the water table, respectively. The *R*
term ensure the total mass balance in both phases is properly accounted
for. An analogous relationship can be generated for the fully implicit
-case by replacing *n* by *n+1* on the *C* and *S* terms of equation .
+case by replacing *n* by *n+1* on the *C* and *S* terms of equation :eq:`24.15`.
Using an average of the fully implicit and fully explicit relationships
gives:
@@ -548,14 +548,14 @@ gives:
\begin{array}{l} {-\frac{1}{2\Delta x_{j} } \frac{D_{m1}^{} }{\Delta x_{m1}^{} } C_{j-1}^{n+1} +\left[\frac{R_{j}^{n+1} }{\Delta t} +\frac{1}{2\Delta x_{j} } \left(\frac{D_{p1}^{} }{\Delta x_{p1}^{} } +\frac{D_{m1}^{} }{\Delta x_{m1}^{} } \right)\right]C_{j}^{n+1} -\frac{1}{2\Delta x_{j} } \frac{D_{p1}^{} }{\Delta x_{p1}^{} } C_{j+1}^{n+1} =} \\ {\frac{R_{j}^{n} }{\Delta t} +\frac{1}{2\Delta x_{j} } \left[\frac{D_{p1}^{} }{\Delta x_{p1}^{} } \left(C_{j+1}^{n} -C_{j}^{n} \right)-\frac{D_{m1}^{} }{\Delta x_{m1}^{} } \left(C_{j}^{n} -C_{j-1}^{n} \right)\right]+\frac{1}{2} \left[S_{j}^{n} +S_{j}^{n+1} \right]} \end{array},
-Equation is solved with a standard tridiagonal solver, i.e.:
+Equation :eq:`24.16` is solved with a standard tridiagonal solver, i.e.:
.. math::
:label: 24.17
aC_{j-1}^{n+1} +bC_{j}^{n+1} +cC_{j+1}^{n+1} =r,
-with coefficients specified in equation .
+with coefficients specified in equation :eq:`24.16`.
Two methane balance checks are performed at each timestep to insure that
the diffusion solution and the time-varying aggregation over inundated
@@ -599,7 +599,7 @@ Inundated Fraction Prediction
----------------------------------
A simplified dynamic representation of spatial inundation
-based on recent work by :ref:`Prigent et al. (2007)` is used. Prigent et al. (2007) described a
+based on recent work by :ref:`Prigent et al. (2007)` is used. :ref:`Prigent et al. (2007)` described a
multi-satellite approach to estimate the global monthly inundated
fraction (:math:`{F}_{i}`) over an equal area grid
(0.25 :math:`\circ` \ :math:`\times`\ 0.25\ :math:`\circ` at the equator)
diff --git a/doc/source/users_guide/setting-up-and-running-a-case/README_history_fields_files b/doc/source/users_guide/setting-up-and-running-a-case/README_history_fields_files
new file mode 100644
index 0000000000..c611c19ae2
--- /dev/null
+++ b/doc/source/users_guide/setting-up-and-running-a-case/README_history_fields_files
@@ -0,0 +1,11 @@
+2021/9/8 slevis
+2023/8/15 samsrabin
+
+The files history_fields_nofates.rst and history_fields_fates.rst each contain a
+table of the history fields, active and inactive, available in the CTSM cases
+that get generated by these tests:
+SMS_Ld1.f10_f10_mg37.I1850Clm50BgcCrop.cheyenne_intel.clm-SaveHistFieldList
+SMS_Ld1.f10_f10_mg37.I2000Clm50FatesCru.cheyenne_intel.clm-SaveHistFieldList
+
+To reproduce these .rst files, run the above tests and the files
+will appear in the corresponding run directories.
diff --git a/doc/source/users_guide/setting-up-and-running-a-case/README_master_list_files b/doc/source/users_guide/setting-up-and-running-a-case/README_master_list_files
deleted file mode 100644
index 61f8ef44d4..0000000000
--- a/doc/source/users_guide/setting-up-and-running-a-case/README_master_list_files
+++ /dev/null
@@ -1,10 +0,0 @@
-2021/9/8 slevis
-
-The files master_list_nofates.rst and master_list_fates.rst each contain a
-table of the history fields, active and inactive, available in the CTSM cases
-that get generated by these tests:
-ERP_P36x2_D_Ld3.f10_f10_mg37.I1850Clm50BgcCrop.cheyenne_gnu.clm-extra_outputs
-ERS_Ld9.f10_f10_mg37.I2000Clm50FatesCru.cheyenne_intel.clm-FatesColdDefCH4
-
-To reproduce these .rst files, run the above tests and the files
-will appear in the corresponding run directories.
diff --git a/doc/source/users_guide/setting-up-and-running-a-case/customizing-the-clm-namelist.rst b/doc/source/users_guide/setting-up-and-running-a-case/customizing-the-clm-namelist.rst
index 47274d8480..064d3f5979 100644
--- a/doc/source/users_guide/setting-up-and-running-a-case/customizing-the-clm-namelist.rst
+++ b/doc/source/users_guide/setting-up-and-running-a-case/customizing-the-clm-namelist.rst
@@ -43,12 +43,12 @@ Included in the table are the following pieces of information:
Table 1-3. CLM History Fields from a BgcCrop case
-------------------------------------------------
-For Table from a BgcCrop case, please see :doc:`master_list_nofates`.
+For Table from a BgcCrop case, please see :doc:`history_fields_nofates`.
Table 1-4. CLM History Fields from a Fates case
-----------------------------------------------
-For Table from a Fates case, please see :doc:`master_list_fates`.
+For Table from a Fates case, please see :doc:`history_fields_fates`.
---------------------------------------------
diff --git a/doc/source/users_guide/setting-up-and-running-a-case/history_fields_fates.rst b/doc/source/users_guide/setting-up-and-running-a-case/history_fields_fates.rst
new file mode 100644
index 0000000000..ea7c23d22a
--- /dev/null
+++ b/doc/source/users_guide/setting-up-and-running-a-case/history_fields_fates.rst
@@ -0,0 +1,1087 @@
+=============================
+CTSM History Fields (fates)
+=============================
+
+CAUTION: Not all variables are relevant / present for all CTSM cases.
+Key flags used in this CTSM case:
+use_cn = F
+use_crop = F
+use_fates = T
+
+=================================== ================ ============================================================================================== ================================================================= =======
+CTSM History Fields
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+ Variable Name Level Dim. Long Description Units Active?
+=================================== ================ ============================================================================================== ================================================================= =======
+A5TMIN - 5-day running mean of min 2-m temperature K F
+ACTUAL_IMMOB - actual N immobilization gN/m^2/s T
+AGLB - Aboveground leaf biomass kg/m^2 F
+AGSB - Aboveground stem biomass kg/m^2 F
+ALT - current active layer thickness m F
+ALTMAX - maximum annual active layer thickness m F
+ALTMAX_LASTYEAR - maximum prior year active layer thickness m F
+ATM_O3 - atmospheric ozone partial pressure mol/mol F
+ATM_TOPO - atmospheric surface height m T
+AnnET - Annual ET mm/s F
+BCDEP - total BC deposition (dry+wet) from atmosphere kg/m^2/s T
+BTRAN - transpiration beta factor unitless T
+BTRANMN - daily minimum of transpiration beta factor unitless T
+CH4PROD - Gridcell total production of CH4 gC/m2/s T
+CH4_EBUL_TOTAL_SAT - ebullition surface CH4 flux; (+ to atm) mol/m2/s F
+CH4_EBUL_TOTAL_UNSAT - ebullition surface CH4 flux; (+ to atm) mol/m2/s F
+CH4_SURF_AERE_SAT - aerenchyma surface CH4 flux for inundated area; (+ to atm) mol/m2/s T
+CH4_SURF_AERE_UNSAT - aerenchyma surface CH4 flux for non-inundated area; (+ to atm) mol/m2/s T
+CH4_SURF_DIFF_SAT - diffusive surface CH4 flux for inundated / lake area; (+ to atm) mol/m2/s T
+CH4_SURF_DIFF_UNSAT - diffusive surface CH4 flux for non-inundated area; (+ to atm) mol/m2/s T
+CH4_SURF_EBUL_SAT - ebullition surface CH4 flux for inundated / lake area; (+ to atm) mol/m2/s T
+CH4_SURF_EBUL_UNSAT - ebullition surface CH4 flux for non-inundated area; (+ to atm) mol/m2/s T
+COL_CTRUNC - column-level sink for C truncation gC/m^2 F
+COL_NTRUNC - column-level sink for N truncation gN/m^2 F
+COSZEN - cosine of solar zenith angle none F
+CROPPROD1C - 1-yr crop product (grain+biofuel) C gC/m^2 T
+CROPPROD1C_LOSS - loss from 1-yr crop product pool gC/m^2/s T
+CROPPROD1N - 1-yr crop product (grain+biofuel) N gN/m^2 T
+CROPPROD1N_LOSS - loss from 1-yr crop product pool gN/m^2/s T
+CWDC_HR - cwd C heterotrophic respiration gC/m^2/s T
+DENIT - total rate of denitrification gN/m^2/s T
+DGNETDT - derivative of net ground heat flux wrt soil temp W/m^2/K F
+DISPLA - displacement height (vegetated landunits only) m F
+DPVLTRB1 - turbulent deposition velocity 1 m/s F
+DPVLTRB2 - turbulent deposition velocity 2 m/s F
+DPVLTRB3 - turbulent deposition velocity 3 m/s F
+DPVLTRB4 - turbulent deposition velocity 4 m/s F
+DSL - dry surface layer thickness mm T
+DSTDEP - total dust deposition (dry+wet) from atmosphere kg/m^2/s T
+DSTFLXT - total surface dust emission kg/m2/s T
+DWT_CROPPROD1C_GAIN - landcover change-driven addition to 1-year crop product pool gC/m^2/s T
+DWT_CROPPROD1N_GAIN - landcover change-driven addition to 1-year crop product pool gN/m^2/s T
+DWT_PROD100C_GAIN - landcover change-driven addition to 100-yr wood product pool gC/m^2/s F
+DWT_PROD100N_GAIN - landcover change-driven addition to 100-yr wood product pool gN/m^2/s F
+DWT_PROD10C_GAIN - landcover change-driven addition to 10-yr wood product pool gC/m^2/s F
+DWT_PROD10N_GAIN - landcover change-driven addition to 10-yr wood product pool gN/m^2/s F
+DWT_WOODPRODC_GAIN - landcover change-driven addition to wood product pools gC/m^2/s T
+DWT_WOODPRODN_GAIN - landcover change-driven addition to wood product pools gN/m^2/s T
+DYN_COL_ADJUSTMENTS_CH4 - Adjustments in ch4 due to dynamic column areas; only makes sense at the column level: should n gC/m^2 F
+DYN_COL_SOIL_ADJUSTMENTS_C - Adjustments in soil carbon due to dynamic column areas; only makes sense at the column level: gC/m^2 F
+DYN_COL_SOIL_ADJUSTMENTS_N - Adjustments in soil nitrogen due to dynamic column areas; only makes sense at the column level gN/m^2 F
+DYN_COL_SOIL_ADJUSTMENTS_NH4 - Adjustments in soil NH4 due to dynamic column areas; only makes sense at the column level: sho gN/m^2 F
+DYN_COL_SOIL_ADJUSTMENTS_NO3 - Adjustments in soil NO3 due to dynamic column areas; only makes sense at the column level: sho gN/m^2 F
+EFLXBUILD - building heat flux from change in interior building air temperature W/m^2 T
+EFLX_DYNBAL - dynamic land cover change conversion energy flux W/m^2 T
+EFLX_GNET - net heat flux into ground W/m^2 F
+EFLX_GRND_LAKE - net heat flux into lake/snow surface, excluding light transmission W/m^2 T
+EFLX_LH_TOT - total latent heat flux [+ to atm] W/m^2 T
+EFLX_LH_TOT_ICE - total latent heat flux [+ to atm] (ice landunits only) W/m^2 F
+EFLX_LH_TOT_R - Rural total evaporation W/m^2 T
+EFLX_LH_TOT_U - Urban total evaporation W/m^2 F
+EFLX_SOIL_GRND - soil heat flux [+ into soil] W/m^2 F
+ELAI - exposed one-sided leaf area index m^2/m^2 T
+ERRH2O - total water conservation error mm T
+ERRH2OSNO - imbalance in snow depth (liquid water) mm T
+ERRSEB - surface energy conservation error W/m^2 T
+ERRSOI - soil/lake energy conservation error W/m^2 T
+ERRSOL - solar radiation conservation error W/m^2 T
+ESAI - exposed one-sided stem area index m^2/m^2 T
+FATES_AR - autotrophic respiration gC/m^2/s T
+FATES_AREA_PLANTS - area occupied by all plants per m2 land area m2 m-2 T
+FATES_AREA_TREES - area occupied by woody plants per m2 land area m2 m-2 T
+FATES_AR_CANOPY - autotrophic respiration of canopy plants gC/m^2/s T
+FATES_AR_UNDERSTORY - autotrophic respiration of understory plants gC/m^2/s T
+FATES_AUTORESP - autotrophic respiration in kg carbon per m2 per second kg m-2 s-1 T
+FATES_AUTORESP_CANOPY - autotrophic respiration of canopy plants in kg carbon per m2 per second kg m-2 s-1 T
+FATES_AUTORESP_SECONDARY - autotrophic respiration in kg carbon per m2 per second, secondary patches kg m-2 s-1 T
+FATES_AUTORESP_USTORY - autotrophic respiration of understory plants in kg carbon per m2 per second kg m-2 s-1 T
+FATES_BA_WEIGHTED_HEIGHT - basal area-weighted mean height of woody plants m T
+FATES_BURNFRAC - burned area fraction per second s-1 T
+FATES_CANOPY_SPREAD - scaling factor (0-1) between tree basal area and canopy area T
+FATES_CANOPY_VEGC - biomass of canopy plants in kg carbon per m2 land area kg m-2 T
+FATES_CA_WEIGHTED_HEIGHT - crown area-weighted mean height of canopy plants m T
+FATES_CBALANCE_ERROR - total carbon error in kg carbon per second kg s-1 T
+FATES_COLD_STATUS - site-level cold status, 0=not cold-dec, 1=too cold for leaves, 2=not too cold T
+FATES_CROOTMAINTAR - live coarse root maintenance autotrophic respiration in kg carbon per m2 per second kg m-2 s-1 T
+FATES_CROOT_ALLOC - allocation to coarse roots in kg carbon per m2 per second kg m-2 s-1 T
+FATES_DAYSINCE_COLDLEAFOFF - site-level days elapsed since cold leaf drop days T
+FATES_DAYSINCE_COLDLEAFON - site-level days elapsed since cold leaf flush days T
+FATES_DEMOTION_CARBONFLUX - demotion-associated biomass carbon flux from canopy to understory in kg carbon per m2 per seco kg m-2 s-1 T
+FATES_DISTURBANCE_RATE_FIRE - disturbance rate from fire m2 m-2 yr-1 T
+FATES_DISTURBANCE_RATE_LOGGING - disturbance rate from logging m2 m-2 yr-1 T
+FATES_DISTURBANCE_RATE_P2P - disturbance rate from primary to primary lands m2 m-2 yr-1 T
+FATES_DISTURBANCE_RATE_P2S - disturbance rate from primary to secondary lands m2 m-2 yr-1 T
+FATES_DISTURBANCE_RATE_POTENTIAL - potential (i.e., including unresolved) disturbance rate m2 m-2 yr-1 T
+FATES_DISTURBANCE_RATE_S2S - disturbance rate from secondary to secondary lands m2 m-2 yr-1 T
+FATES_DISTURBANCE_RATE_TREEFALL - disturbance rate from treefall m2 m-2 yr-1 T
+FATES_EFFECT_WSPEED - effective wind speed for fire spread in meters per second m s-1 T
+FATES_EXCESS_RESP - respiration of un-allocatable carbon gain kg m-2 s-1 T
+FATES_FDI - Fire Danger Index (probability that an ignition will lead to a fire) 1 T
+FATES_FIRE_CLOSS - carbon loss to atmosphere from fire in kg carbon per m2 per second kg m-2 s-1 T
+FATES_FIRE_INTENSITY - spitfire surface fireline intensity in J per m per second J m-1 s-1 T
+FATES_FIRE_INTENSITY_BURNFRAC - product of surface fire intensity and burned area fraction -- divide by FATES_BURNFRAC to get J m-1 s-1 T
+FATES_FRACTION - total gridcell fraction which FATES is running over m2 m-2 T
+FATES_FROOTC - total biomass in live plant fine roots in kg carbon per m2 kg m-2 T
+FATES_FROOTMAINTAR - fine root maintenance autotrophic respiration in kg carbon per m2 per second kg m-2 s-1 T
+FATES_FROOT_ALLOC - allocation to fine roots in kg carbon per m2 per second kg m-2 s-1 T
+FATES_FUELCONSUMED - total fuel consumed in kg carbon per m2 land area kg m-2 T
+FATES_FUEL_AMOUNT - total ground fuel related to FATES_ROS (omits 1000hr fuels) in kg C per m2 land area kg m-2 T
+FATES_FUEL_BULKD - fuel bulk density in kg per m3 kg m-3 T
+FATES_FUEL_EFF_MOIST - spitfire fuel moisture (volumetric) m3 m-3 T
+FATES_FUEL_MEF - fuel moisture of extinction (volumetric) m3 m-3 T
+FATES_FUEL_SAV - spitfire fuel surface area to volume ratio m-1 T
+FATES_GDD - site-level growing degree days degree_Celsius T
+FATES_GPP - gross primary production in kg carbon per m2 per second kg m-2 s-1 T
+FATES_GPP_CANOPY - gross primary production of canopy plants in kg carbon per m2 per second kg m-2 s-1 T
+FATES_GPP_SECONDARY - gross primary production in kg carbon per m2 per second, secondary patches kg m-2 s-1 T
+FATES_GPP_USTORY - gross primary production of understory plants in kg carbon per m2 per second kg m-2 s-1 T
+FATES_GROWTH_RESP - growth respiration in kg carbon per m2 per second kg m-2 s-1 T
+FATES_GROWTH_RESP_SECONDARY - growth respiration in kg carbon per m2 per second, secondary patches kg m-2 s-1 T
+FATES_HARVEST_CARBON_FLUX - harvest carbon flux in kg carbon per m2 per year kg m-2 yr-1 T
+FATES_HARVEST_DEBT - Accumulated carbon failed to be harvested kg C T
+FATES_HARVEST_DEBT_SEC - Accumulated carbon failed to be harvested from secondary patches kg C T
+FATES_HET_RESP - heterotrophic respiration in kg carbon per m2 per second kg m-2 s-1 T
+FATES_IGNITIONS - number of successful fire ignitions per m2 land area per second m-2 s-1 T
+FATES_LAI - leaf area index per m2 land area m2 m-2 T
+FATES_LAI_SECONDARY - leaf area index per m2 land area, secondary patches m2 m-2 T
+FATES_LBLAYER_COND - mean leaf boundary layer conductance mol m-2 s-1 T
+FATES_LEAFC - total biomass in live plant leaves in kg carbon per m2 kg m-2 T
+FATES_LEAFMAINTAR - leaf maintenance autotrophic respiration in kg carbon per m2 per second kg m-2 s-1 T
+FATES_LEAF_ALLOC - allocation to leaves in kg carbon per m2 per second kg m-2 s-1 T
+FATES_LITTER_IN - litter flux in kg carbon per m2 per second kg m-2 s-1 T
+FATES_LITTER_OUT - litter flux out in kg carbon (exudation, fragmentation, seed decay) kg m-2 s-1 T
+FATES_LSTEMMAINTAR - live stem maintenance autotrophic respiration in kg carbon per m2 per second kg m-2 s-1 T
+FATES_MAINT_RESP - maintenance respiration in kg carbon per m2 land area per second, secondary patches kg m-2 s-1 T
+FATES_MAINT_RESP_SECONDARY - maintenance respiration in kg carbon per m2 land area per second kg m-2 s-1 T
+FATES_MAINT_RESP_UNREDUCED - diagnostic maintenance respiration if the low-carbon-storage reduction is ignored kg m-2 s-1 F
+FATES_MORTALITY_CFLUX_CANOPY - flux of biomass carbon from live to dead pools from mortality of canopy plants in kg carbon pe kg m-2 s-1 T
+FATES_MORTALITY_CFLUX_USTORY - flux of biomass carbon from live to dead pools from mortality of understory plants in kg carbo kg m-2 s-1 T
+FATES_NCHILLDAYS - site-level number of chill days days T
+FATES_NCOHORTS - total number of cohorts per site T
+FATES_NCOHORTS_SECONDARY - total number of cohorts per site T
+FATES_NCOLDDAYS - site-level number of cold days days T
+FATES_NEP - net ecosystem production in kg carbon per m2 per second kg m-2 s-1 T
+FATES_NESTEROV_INDEX - nesterov fire danger index T
+FATES_NONSTRUCTC - non-structural biomass (sapwood + leaf + fineroot) in kg carbon per m2 kg m-2 T
+FATES_NPATCHES - total number of patches per site T
+FATES_NPATCHES_SECONDARY - total number of patches per site T
+FATES_NPP - net primary production in kg carbon per m2 per second kg m-2 s-1 T
+FATES_NPP_SECONDARY - net primary production in kg carbon per m2 per second, secondary patches kg m-2 s-1 T
+FATES_PRIMARY_PATCHFUSION_ERR - error in total primary lands associated with patch fusion m2 m-2 yr-1 T
+FATES_PROMOTION_CARBONFLUX - promotion-associated biomass carbon flux from understory to canopy in kg carbon per m2 per sec kg m-2 s-1 T
+FATES_RAD_ERROR - radiation error in FATES RTM W m-2 T
+FATES_REPROC - total biomass in live plant reproductive tissues in kg carbon per m2 kg m-2 T
+FATES_ROS - fire rate of spread in meters per second m s-1 T
+FATES_SAPWOODC - total biomass in live plant sapwood in kg carbon per m2 kg m-2 T
+FATES_SECONDARY_FOREST_FRACTION - secondary forest fraction m2 m-2 T
+FATES_SECONDARY_FOREST_VEGC - biomass on secondary lands in kg carbon per m2 land area (mult by FATES_SECONDARY_FOREST_FRACT kg m-2 T
+FATES_SEEDLING_POOL - total seedling (ie germinated seeds) mass of all PFTs in kg carbon per m2 land area kg m-2 T
+FATES_SEEDS_IN - seed production rate in kg carbon per m2 second kg m-2 s-1 T
+FATES_SEEDS_IN_LOCAL - local seed production rate in kg carbon per m2 second kg m-2 s-1 T
+FATES_SEED_ALLOC - allocation to seeds in kg carbon per m2 per second kg m-2 s-1 T
+FATES_SEED_BANK - total seed mass of all PFTs in kg carbon per m2 land area kg m-2 T
+FATES_STEM_ALLOC - allocation to stem in kg carbon per m2 per second kg m-2 s-1 T
+FATES_STOMATAL_COND - mean stomatal conductance mol m-2 s-1 T
+FATES_STOREC - total biomass in live plant storage in kg carbon per m2 land area kg m-2 T
+FATES_STOREC_TF - Storage C fraction of target kg kg-1 T
+FATES_STORE_ALLOC - allocation to storage tissues in kg carbon per m2 per second kg m-2 s-1 T
+FATES_STRUCTC - structural biomass in kg carbon per m2 land area kg m-2 T
+FATES_TGROWTH - fates long-term running mean vegetation temperature by site degree_Celsius F
+FATES_TLONGTERM - fates 30-year running mean vegetation temperature by site degree_Celsius F
+FATES_TRIMMING - degree to which canopy expansion is limited by leaf economics (0-1) 1 T
+FATES_TVEG - fates instantaneous mean vegetation temperature by site degree_Celsius T
+FATES_TVEG24 - fates 24-hr running mean vegetation temperature by site degree_Celsius T
+FATES_UNGERM_SEED_BANK - ungerminated seed mass of all PFTs in kg carbon per m2 land area kg m-2 T
+FATES_USTORY_VEGC - biomass of understory plants in kg carbon per m2 land area kg m-2 T
+FATES_VEGC - total biomass in live plants in kg carbon per m2 land area kg m-2 T
+FATES_VEGC_ABOVEGROUND - aboveground biomass in kg carbon per m2 land area kg m-2 T
+FATES_WOOD_PRODUCT - total wood product from logging in kg carbon per m2 land area kg m-2 T
+FCEV - canopy evaporation W/m^2 T
+FCH4 - Gridcell surface CH4 flux to atmosphere (+ to atm) kgC/m2/s T
+FCH4TOCO2 - Gridcell oxidation of CH4 to CO2 gC/m2/s T
+FCH4_DFSAT - CH4 additional flux due to changing fsat, natural vegetated and crop landunits only kgC/m2/s T
+FCO2 - CO2 flux to atmosphere (+ to atm) kgCO2/m2/s F
+FCOV - fractional impermeable area unitless T
+FCTR - canopy transpiration W/m^2 T
+FGEV - ground evaporation W/m^2 T
+FGR - heat flux into soil/snow including snow melt and lake / snow light transmission W/m^2 T
+FGR12 - heat flux between soil layers 1 and 2 W/m^2 T
+FGR_ICE - heat flux into soil/snow including snow melt and lake / snow light transmission (ice landunits W/m^2 F
+FGR_R - Rural heat flux into soil/snow including snow melt and snow light transmission W/m^2 F
+FGR_U - Urban heat flux into soil/snow including snow melt W/m^2 F
+FH2OSFC - fraction of ground covered by surface water unitless T
+FH2OSFC_NOSNOW - fraction of ground covered by surface water (if no snow present) unitless F
+FINUNDATED - fractional inundated area of vegetated columns unitless T
+FINUNDATED_LAG - time-lagged inundated fraction of vegetated columns unitless F
+FIRA - net infrared (longwave) radiation W/m^2 T
+FIRA_ICE - net infrared (longwave) radiation (ice landunits only) W/m^2 F
+FIRA_R - Rural net infrared (longwave) radiation W/m^2 T
+FIRA_U - Urban net infrared (longwave) radiation W/m^2 F
+FIRE - emitted infrared (longwave) radiation W/m^2 T
+FIRE_ICE - emitted infrared (longwave) radiation (ice landunits only) W/m^2 F
+FIRE_R - Rural emitted infrared (longwave) radiation W/m^2 T
+FIRE_U - Urban emitted infrared (longwave) radiation W/m^2 F
+FLDS - atmospheric longwave radiation (downscaled to columns in glacier regions) W/m^2 T
+FLDS_ICE - atmospheric longwave radiation (downscaled to columns in glacier regions) (ice landunits only) W/m^2 F
+FPG - fraction of potential gpp proportion T
+FPI - fraction of potential immobilization proportion T
+FROST_TABLE - frost table depth (natural vegetated and crop landunits only) m F
+FSA - absorbed solar radiation W/m^2 T
+FSAT - fractional area with water table at surface unitless T
+FSA_ICE - absorbed solar radiation (ice landunits only) W/m^2 F
+FSA_R - Rural absorbed solar radiation W/m^2 F
+FSA_U - Urban absorbed solar radiation W/m^2 F
+FSD24 - direct radiation (last 24hrs) K F
+FSD240 - direct radiation (last 240hrs) K F
+FSDS - atmospheric incident solar radiation W/m^2 T
+FSDSND - direct nir incident solar radiation W/m^2 T
+FSDSNDLN - direct nir incident solar radiation at local noon W/m^2 T
+FSDSNI - diffuse nir incident solar radiation W/m^2 T
+FSDSVD - direct vis incident solar radiation W/m^2 T
+FSDSVDLN - direct vis incident solar radiation at local noon W/m^2 T
+FSDSVI - diffuse vis incident solar radiation W/m^2 T
+FSDSVILN - diffuse vis incident solar radiation at local noon W/m^2 T
+FSH - sensible heat not including correction for land use change and rain/snow conversion W/m^2 T
+FSH_G - sensible heat from ground W/m^2 T
+FSH_ICE - sensible heat not including correction for land use change and rain/snow conversion (ice landu W/m^2 F
+FSH_PRECIP_CONVERSION - Sensible heat flux from conversion of rain/snow atm forcing W/m^2 T
+FSH_R - Rural sensible heat W/m^2 T
+FSH_RUNOFF_ICE_TO_LIQ - sensible heat flux generated from conversion of ice runoff to liquid W/m^2 T
+FSH_TO_COUPLER - sensible heat sent to coupler (includes corrections for land use change, rain/snow conversion W/m^2 T
+FSH_U - Urban sensible heat W/m^2 F
+FSH_V - sensible heat from veg W/m^2 T
+FSI24 - indirect radiation (last 24hrs) K F
+FSI240 - indirect radiation (last 240hrs) K F
+FSM - snow melt heat flux W/m^2 T
+FSM_ICE - snow melt heat flux (ice landunits only) W/m^2 F
+FSM_R - Rural snow melt heat flux W/m^2 F
+FSM_U - Urban snow melt heat flux W/m^2 F
+FSNO - fraction of ground covered by snow unitless T
+FSNO_EFF - effective fraction of ground covered by snow unitless T
+FSNO_ICE - fraction of ground covered by snow (ice landunits only) unitless F
+FSR - reflected solar radiation W/m^2 T
+FSRND - direct nir reflected solar radiation W/m^2 T
+FSRNDLN - direct nir reflected solar radiation at local noon W/m^2 T
+FSRNI - diffuse nir reflected solar radiation W/m^2 T
+FSRVD - direct vis reflected solar radiation W/m^2 T
+FSRVDLN - direct vis reflected solar radiation at local noon W/m^2 T
+FSRVI - diffuse vis reflected solar radiation W/m^2 T
+FSR_ICE - reflected solar radiation (ice landunits only) W/m^2 F
+FSUN - sunlit fraction of canopy proportion F
+FSUN24 - fraction sunlit (last 24hrs) K F
+FSUN240 - fraction sunlit (last 240hrs) K F
+F_DENIT - denitrification flux gN/m^2/s T
+F_N2O_DENIT - denitrification N2O flux gN/m^2/s T
+F_N2O_NIT - nitrification N2O flux gN/m^2/s T
+F_NIT - nitrification flux gN/m^2/s T
+GROSS_NMIN - gross rate of N mineralization gN/m^2/s T
+GRU_PROD100C_GAIN - gross unrepresented landcover change addition to 100-yr wood product pool gC/m^2/s F
+GRU_PROD100N_GAIN - gross unrepresented landcover change addition to 100-yr wood product pool gN/m^2/s F
+GRU_PROD10C_GAIN - gross unrepresented landcover change addition to 10-yr wood product pool gC/m^2/s F
+GRU_PROD10N_GAIN - gross unrepresented landcover change addition to 10-yr wood product pool gN/m^2/s F
+GSSHA - shaded leaf stomatal conductance umol H20/m2/s T
+GSSHALN - shaded leaf stomatal conductance at local noon umol H20/m2/s T
+GSSUN - sunlit leaf stomatal conductance umol H20/m2/s T
+GSSUNLN - sunlit leaf stomatal conductance at local noon umol H20/m2/s T
+H2OCAN - intercepted water mm T
+H2OSFC - surface water depth mm T
+H2OSNO - snow depth (liquid water) mm T
+H2OSNO_ICE - snow depth (liquid water, ice landunits only) mm F
+H2OSNO_TOP - mass of snow in top snow layer kg/m2 T
+HBOT - canopy bottom m F
+HEAT_CONTENT1 - initial gridcell total heat content J/m^2 T
+HEAT_CONTENT1_VEG - initial gridcell total heat content - natural vegetated and crop landunits only J/m^2 F
+HEAT_CONTENT2 - post land cover change total heat content J/m^2 F
+HEAT_FROM_AC - sensible heat flux put into canyon due to heat removed from air conditioning W/m^2 T
+HIA - 2 m NWS Heat Index C T
+HIA_R - Rural 2 m NWS Heat Index C T
+HIA_U - Urban 2 m NWS Heat Index C T
+HR - total heterotrophic respiration gC/m^2/s T
+HTOP - canopy top m T
+HUMIDEX - 2 m Humidex C T
+HUMIDEX_R - Rural 2 m Humidex C T
+HUMIDEX_U - Urban 2 m Humidex C T
+ICE_CONTENT1 - initial gridcell total ice content mm T
+ICE_CONTENT2 - post land cover change total ice content mm F
+ICE_MODEL_FRACTION - Ice sheet model fractional coverage unitless F
+INT_SNOW - accumulated swe (natural vegetated and crop landunits only) mm F
+INT_SNOW_ICE - accumulated swe (ice landunits only) mm F
+IWUELN - local noon intrinsic water use efficiency umolCO2/molH2O T
+LAI240 - 240hr average of leaf area index m^2/m^2 F
+LAISHA - shaded projected leaf area index m^2/m^2 T
+LAISUN - sunlit projected leaf area index m^2/m^2 T
+LAKEICEFRAC_SURF - surface lake layer ice mass fraction unitless T
+LAKEICETHICK - thickness of lake ice (including physical expansion on freezing) m T
+LIQCAN - intercepted liquid water mm T
+LIQUID_CONTENT1 - initial gridcell total liq content mm T
+LIQUID_CONTENT2 - post landuse change gridcell total liq content mm F
+LIQUID_WATER_TEMP1 - initial gridcell weighted average liquid water temperature K F
+LITTERC_HR - litter C heterotrophic respiration gC/m^2/s T
+LIT_CEL_C - LIT_CEL C gC/m^2 T
+LIT_CEL_C_1m - LIT_CEL C to 1 meter gC/m^2 F
+LIT_CEL_C_TO_SOM_ACT_C - decomp. of cellulosic litter C to active soil organic C gC/m^2/s F
+LIT_CEL_HR - Het. Resp. from cellulosic litter gC/m^2/s F
+LIT_CEL_N - LIT_CEL N gN/m^2 T
+LIT_CEL_N_1m - LIT_CEL N to 1 meter gN/m^2 F
+LIT_CEL_N_TO_SOM_ACT_N - decomp. of cellulosic litter N to active soil organic N gN/m^2 F
+LIT_LIG_C - LIT_LIG C gC/m^2 T
+LIT_LIG_C_1m - LIT_LIG C to 1 meter gC/m^2 F
+LIT_LIG_C_TO_SOM_SLO_C - decomp. of lignin litter C to slow soil organic ma C gC/m^2/s F
+LIT_LIG_HR - Het. Resp. from lignin litter gC/m^2/s F
+LIT_LIG_N - LIT_LIG N gN/m^2 T
+LIT_LIG_N_1m - LIT_LIG N to 1 meter gN/m^2 F
+LIT_LIG_N_TO_SOM_SLO_N - decomp. of lignin litter N to slow soil organic ma N gN/m^2 F
+LIT_MET_C - LIT_MET C gC/m^2 T
+LIT_MET_C_1m - LIT_MET C to 1 meter gC/m^2 F
+LIT_MET_C_TO_SOM_ACT_C - decomp. of metabolic litter C to active soil organic C gC/m^2/s F
+LIT_MET_HR - Het. Resp. from metabolic litter gC/m^2/s F
+LIT_MET_N - LIT_MET N gN/m^2 T
+LIT_MET_N_1m - LIT_MET N to 1 meter gN/m^2 F
+LIT_MET_N_TO_SOM_ACT_N - decomp. of metabolic litter N to active soil organic N gN/m^2 F
+LNC - leaf N concentration gN leaf/m^2 T
+LWdown - atmospheric longwave radiation (downscaled to columns in glacier regions) W/m^2 F
+LWup - upwelling longwave radiation W/m^2 F
+MORTALITY_CROWNAREA_CANOPY - Crown area of canopy trees that died m2/ha/year T
+MORTALITY_CROWNAREA_UNDERSTORY - Crown aera of understory trees that died m2/ha/year T
+M_LIT_CEL_C_TO_LEACHING - cellulosic litter C leaching loss gC/m^2/s F
+M_LIT_CEL_N_TO_LEACHING - cellulosic litter N leaching loss gN/m^2/s F
+M_LIT_LIG_C_TO_LEACHING - lignin litter C leaching loss gC/m^2/s F
+M_LIT_LIG_N_TO_LEACHING - lignin litter N leaching loss gN/m^2/s F
+M_LIT_MET_C_TO_LEACHING - metabolic litter C leaching loss gC/m^2/s F
+M_LIT_MET_N_TO_LEACHING - metabolic litter N leaching loss gN/m^2/s F
+M_SOM_ACT_C_TO_LEACHING - active soil organic C leaching loss gC/m^2/s F
+M_SOM_ACT_N_TO_LEACHING - active soil organic N leaching loss gN/m^2/s F
+M_SOM_PAS_C_TO_LEACHING - passive soil organic C leaching loss gC/m^2/s F
+M_SOM_PAS_N_TO_LEACHING - passive soil organic N leaching loss gN/m^2/s F
+M_SOM_SLO_C_TO_LEACHING - slow soil organic ma C leaching loss gC/m^2/s F
+M_SOM_SLO_N_TO_LEACHING - slow soil organic ma N leaching loss gN/m^2/s F
+NDEP_TO_SMINN - atmospheric N deposition to soil mineral N gN/m^2/s T
+NEM - Gridcell net adjustment to net carbon exchange passed to atm. for methane production gC/m2/s T
+NET_NMIN - net rate of N mineralization gN/m^2/s T
+NFIX_TO_SMINN - symbiotic/asymbiotic N fixation to soil mineral N gN/m^2/s T
+NSUBSTEPS - number of adaptive timesteps in CLM timestep unitless F
+OBU - Monin-Obukhov length m F
+OCDEP - total OC deposition (dry+wet) from atmosphere kg/m^2/s T
+PARVEGLN - absorbed par by vegetation at local noon W/m^2 T
+PBOT - atmospheric pressure at surface (downscaled to columns in glacier regions) Pa T
+PCH4 - atmospheric partial pressure of CH4 Pa T
+PCO2 - atmospheric partial pressure of CO2 Pa T
+POTENTIAL_IMMOB - potential N immobilization gN/m^2/s T
+POT_F_DENIT - potential denitrification flux gN/m^2/s T
+POT_F_NIT - potential nitrification flux gN/m^2/s T
+PROD100C - 100-yr wood product C gC/m^2 F
+PROD100C_LOSS - loss from 100-yr wood product pool gC/m^2/s F
+PROD100N - 100-yr wood product N gN/m^2 F
+PROD100N_LOSS - loss from 100-yr wood product pool gN/m^2/s F
+PROD10C - 10-yr wood product C gC/m^2 F
+PROD10C_LOSS - loss from 10-yr wood product pool gC/m^2/s F
+PROD10N - 10-yr wood product N gN/m^2 F
+PROD10N_LOSS - loss from 10-yr wood product pool gN/m^2/s F
+PSurf - atmospheric pressure at surface (downscaled to columns in glacier regions) Pa F
+Q2M - 2m specific humidity kg/kg T
+QAF - canopy air humidity kg/kg F
+QBOT - atmospheric specific humidity (downscaled to columns in glacier regions) kg/kg T
+QDIRECT_THROUGHFALL - direct throughfall of liquid (rain + above-canopy irrigation) mm/s F
+QDIRECT_THROUGHFALL_SNOW - direct throughfall of snow mm/s F
+QDRAI - sub-surface drainage mm/s T
+QDRAI_PERCH - perched wt drainage mm/s T
+QDRAI_XS - saturation excess drainage mm/s T
+QDRIP - rate of excess canopy liquid falling off canopy mm/s F
+QDRIP_SNOW - rate of excess canopy snow falling off canopy mm/s F
+QFLOOD - runoff from river flooding mm/s T
+QFLX_EVAP_TOT - qflx_evap_soi + qflx_evap_can + qflx_tran_veg kg m-2 s-1 T
+QFLX_EVAP_VEG - vegetation evaporation mm H2O/s F
+QFLX_ICE_DYNBAL - ice dynamic land cover change conversion runoff flux mm/s T
+QFLX_LIQDEW_TO_TOP_LAYER - rate of liquid water deposited on top soil or snow layer (dew) mm H2O/s T
+QFLX_LIQEVAP_FROM_TOP_LAYER - rate of liquid water evaporated from top soil or snow layer mm H2O/s T
+QFLX_LIQ_DYNBAL - liq dynamic land cover change conversion runoff flux mm/s T
+QFLX_LIQ_GRND - liquid (rain+irrigation) on ground after interception mm H2O/s F
+QFLX_SNOW_DRAIN - drainage from snow pack mm/s T
+QFLX_SNOW_DRAIN_ICE - drainage from snow pack melt (ice landunits only) mm/s T
+QFLX_SNOW_GRND - snow on ground after interception mm H2O/s F
+QFLX_SOLIDDEW_TO_TOP_LAYER - rate of solid water deposited on top soil or snow layer (frost) mm H2O/s T
+QFLX_SOLIDEVAP_FROM_TOP_LAYER - rate of ice evaporated from top soil or snow layer (sublimation) (also includes bare ice subli mm H2O/s T
+QFLX_SOLIDEVAP_FROM_TOP_LAYER_ICE - rate of ice evaporated from top soil or snow layer (sublimation) (also includes bare ice subli mm H2O/s F
+QH2OSFC - surface water runoff mm/s T
+QH2OSFC_TO_ICE - surface water converted to ice mm/s F
+QHR - hydraulic redistribution mm/s T
+QICE - ice growth/melt mm/s T
+QICE_FRZ - ice growth mm/s T
+QICE_MELT - ice melt mm/s T
+QINFL - infiltration mm/s T
+QINTR - interception mm/s T
+QIRRIG_DEMAND - irrigation demand mm/s F
+QIRRIG_DRIP - water added via drip irrigation mm/s F
+QIRRIG_FROM_GW_CONFINED - water added through confined groundwater irrigation mm/s T
+QIRRIG_FROM_GW_UNCONFINED - water added through unconfined groundwater irrigation mm/s T
+QIRRIG_FROM_SURFACE - water added through surface water irrigation mm/s T
+QIRRIG_SPRINKLER - water added via sprinkler irrigation mm/s F
+QOVER - total surface runoff (includes QH2OSFC) mm/s T
+QOVER_LAG - time-lagged surface runoff for soil columns mm/s F
+QPHSNEG - net negative hydraulic redistribution flux mm/s F
+QRGWL - surface runoff at glaciers (liquid only), wetlands, lakes; also includes melted ice runoff fro mm/s T
+QRUNOFF - total liquid runoff not including correction for land use change mm/s T
+QRUNOFF_ICE - total liquid runoff not incl corret for LULCC (ice landunits only) mm/s T
+QRUNOFF_ICE_TO_COUPLER - total ice runoff sent to coupler (includes corrections for land use change) mm/s T
+QRUNOFF_ICE_TO_LIQ - liquid runoff from converted ice runoff mm/s F
+QRUNOFF_R - Rural total runoff mm/s F
+QRUNOFF_TO_COUPLER - total liquid runoff sent to coupler (includes corrections for land use change) mm/s T
+QRUNOFF_U - Urban total runoff mm/s F
+QSNOCPLIQ - excess liquid h2o due to snow capping not including correction for land use change mm H2O/s T
+QSNOEVAP - evaporation from snow (only when snl<0, otherwise it is equal to qflx_ev_soil) mm/s T
+QSNOFRZ - column-integrated snow freezing rate kg/m2/s T
+QSNOFRZ_ICE - column-integrated snow freezing rate (ice landunits only) mm/s T
+QSNOMELT - snow melt rate mm/s T
+QSNOMELT_ICE - snow melt (ice landunits only) mm/s T
+QSNOUNLOAD - canopy snow unloading mm/s T
+QSNO_TEMPUNLOAD - canopy snow temp unloading mm/s T
+QSNO_WINDUNLOAD - canopy snow wind unloading mm/s T
+QSNWCPICE - excess solid h2o due to snow capping not including correction for land use change mm H2O/s T
+QSOIL - Ground evaporation (soil/snow evaporation + soil/snow sublimation - dew) mm/s T
+QSOIL_ICE - Ground evaporation (ice landunits only) mm/s T
+QTOPSOIL - water input to surface mm/s F
+QVEGE - canopy evaporation mm/s T
+QVEGT - canopy transpiration mm/s T
+Qair - atmospheric specific humidity (downscaled to columns in glacier regions) kg/kg F
+Qh - sensible heat W/m^2 F
+Qle - total evaporation W/m^2 F
+Qstor - storage heat flux (includes snowmelt) W/m^2 F
+Qtau - momentum flux kg/m/s^2 F
+RAH1 - aerodynamical resistance s/m F
+RAH2 - aerodynamical resistance s/m F
+RAIN - atmospheric rain, after rain/snow repartitioning based on temperature mm/s T
+RAIN_FROM_ATM - atmospheric rain received from atmosphere (pre-repartitioning) mm/s T
+RAIN_ICE - atmospheric rain, after rain/snow repartitioning based on temperature (ice landunits only) mm/s F
+RAM_LAKE - aerodynamic resistance for momentum (lakes only) s/m F
+RAW1 - aerodynamical resistance s/m F
+RAW2 - aerodynamical resistance s/m F
+RB - leaf boundary resistance s/m F
+RH - atmospheric relative humidity % F
+RH2M - 2m relative humidity % T
+RH2M_R - Rural 2m specific humidity % F
+RH2M_U - Urban 2m relative humidity % F
+RHAF - fractional humidity of canopy air fraction F
+RH_LEAF - fractional humidity at leaf surface fraction F
+RSCANOPY - canopy resistance s m-1 T
+RSSHA - shaded leaf stomatal resistance s/m T
+RSSUN - sunlit leaf stomatal resistance s/m T
+Rainf - atmospheric rain, after rain/snow repartitioning based on temperature mm/s F
+Rnet - net radiation W/m^2 F
+SABG - solar rad absorbed by ground W/m^2 T
+SABG_PEN - Rural solar rad penetrating top soil or snow layer watt/m^2 T
+SABV - solar rad absorbed by veg W/m^2 T
+SMINN - soil mineral N gN/m^2 T
+SMINN_TO_PLANT - plant uptake of soil mineral N gN/m^2/s T
+SMINN_TO_S1N_L1 - mineral N flux for decomp. of LIT_METto SOM_ACT gN/m^2 F
+SMINN_TO_S1N_L2 - mineral N flux for decomp. of LIT_CELto SOM_ACT gN/m^2 F
+SMINN_TO_S1N_S2 - mineral N flux for decomp. of SOM_SLOto SOM_ACT gN/m^2 F
+SMINN_TO_S1N_S3 - mineral N flux for decomp. of SOM_PASto SOM_ACT gN/m^2 F
+SMINN_TO_S2N_L3 - mineral N flux for decomp. of LIT_LIGto SOM_SLO gN/m^2 F
+SMINN_TO_S2N_S1 - mineral N flux for decomp. of SOM_ACTto SOM_SLO gN/m^2 F
+SMINN_TO_S3N_S1 - mineral N flux for decomp. of SOM_ACTto SOM_PAS gN/m^2 F
+SMINN_TO_S3N_S2 - mineral N flux for decomp. of SOM_SLOto SOM_PAS gN/m^2 F
+SMIN_NH4 - soil mineral NH4 gN/m^2 T
+SMIN_NO3 - soil mineral NO3 gN/m^2 T
+SMIN_NO3_LEACHED - soil NO3 pool loss to leaching gN/m^2/s T
+SMIN_NO3_RUNOFF - soil NO3 pool loss to runoff gN/m^2/s T
+SNOBCMCL - mass of BC in snow column kg/m2 T
+SNOBCMSL - mass of BC in top snow layer kg/m2 T
+SNOCAN - intercepted snow mm T
+SNODSTMCL - mass of dust in snow column kg/m2 T
+SNODSTMSL - mass of dust in top snow layer kg/m2 T
+SNOFSDSND - direct nir incident solar radiation on snow W/m^2 F
+SNOFSDSNI - diffuse nir incident solar radiation on snow W/m^2 F
+SNOFSDSVD - direct vis incident solar radiation on snow W/m^2 F
+SNOFSDSVI - diffuse vis incident solar radiation on snow W/m^2 F
+SNOFSRND - direct nir reflected solar radiation from snow W/m^2 T
+SNOFSRNI - diffuse nir reflected solar radiation from snow W/m^2 T
+SNOFSRVD - direct vis reflected solar radiation from snow W/m^2 T
+SNOFSRVI - diffuse vis reflected solar radiation from snow W/m^2 T
+SNOINTABS - Fraction of incoming solar absorbed by lower snow layers - T
+SNOLIQFL - top snow layer liquid water fraction (land) fraction F
+SNOOCMCL - mass of OC in snow column kg/m2 T
+SNOOCMSL - mass of OC in top snow layer kg/m2 T
+SNORDSL - top snow layer effective grain radius m^-6 F
+SNOTTOPL - snow temperature (top layer) K F
+SNOTTOPL_ICE - snow temperature (top layer, ice landunits only) K F
+SNOTXMASS - snow temperature times layer mass, layer sum; to get mass-weighted temperature, divide by (SNO K kg/m2 T
+SNOTXMASS_ICE - snow temperature times layer mass, layer sum (ice landunits only); to get mass-weighted temper K kg/m2 F
+SNOW - atmospheric snow, after rain/snow repartitioning based on temperature mm/s T
+SNOWDP - gridcell mean snow height m T
+SNOWICE - snow ice kg/m2 T
+SNOWICE_ICE - snow ice (ice landunits only) kg/m2 F
+SNOWLIQ - snow liquid water kg/m2 T
+SNOWLIQ_ICE - snow liquid water (ice landunits only) kg/m2 F
+SNOW_5D - 5day snow avg m F
+SNOW_DEPTH - snow height of snow covered area m T
+SNOW_DEPTH_ICE - snow height of snow covered area (ice landunits only) m F
+SNOW_FROM_ATM - atmospheric snow received from atmosphere (pre-repartitioning) mm/s T
+SNOW_ICE - atmospheric snow, after rain/snow repartitioning based on temperature (ice landunits only) mm/s F
+SNOW_PERSISTENCE - Length of time of continuous snow cover (nat. veg. landunits only) seconds T
+SNOW_SINKS - snow sinks (liquid water) mm/s T
+SNOW_SOURCES - snow sources (liquid water) mm/s T
+SNOdTdzL - top snow layer temperature gradient (land) K/m F
+SOIL10 - 10-day running mean of 12cm layer soil K F
+SOILC_HR - soil C heterotrophic respiration gC/m^2/s T
+SOILRESIS - soil resistance to evaporation s/m T
+SOILWATER_10CM - soil liquid water + ice in top 10cm of soil (veg landunits only) kg/m2 T
+SOMC_FIRE - C loss due to peat burning gC/m^2/s T
+SOM_ACT_C - SOM_ACT C gC/m^2 T
+SOM_ACT_C_1m - SOM_ACT C to 1 meter gC/m^2 F
+SOM_ACT_C_TO_SOM_PAS_C - decomp. of active soil organic C to passive soil organic C gC/m^2/s F
+SOM_ACT_C_TO_SOM_SLO_C - decomp. of active soil organic C to slow soil organic ma C gC/m^2/s F
+SOM_ACT_HR_S2 - Het. Resp. from active soil organic gC/m^2/s F
+SOM_ACT_HR_S3 - Het. Resp. from active soil organic gC/m^2/s F
+SOM_ACT_N - SOM_ACT N gN/m^2 T
+SOM_ACT_N_1m - SOM_ACT N to 1 meter gN/m^2 F
+SOM_ACT_N_TO_SOM_PAS_N - decomp. of active soil organic N to passive soil organic N gN/m^2 F
+SOM_ACT_N_TO_SOM_SLO_N - decomp. of active soil organic N to slow soil organic ma N gN/m^2 F
+SOM_C_LEACHED - total flux of C from SOM pools due to leaching gC/m^2/s T
+SOM_N_LEACHED - total flux of N from SOM pools due to leaching gN/m^2/s F
+SOM_PAS_C - SOM_PAS C gC/m^2 T
+SOM_PAS_C_1m - SOM_PAS C to 1 meter gC/m^2 F
+SOM_PAS_C_TO_SOM_ACT_C - decomp. of passive soil organic C to active soil organic C gC/m^2/s F
+SOM_PAS_HR - Het. Resp. from passive soil organic gC/m^2/s F
+SOM_PAS_N - SOM_PAS N gN/m^2 T
+SOM_PAS_N_1m - SOM_PAS N to 1 meter gN/m^2 F
+SOM_PAS_N_TO_SOM_ACT_N - decomp. of passive soil organic N to active soil organic N gN/m^2 F
+SOM_SLO_C - SOM_SLO C gC/m^2 T
+SOM_SLO_C_1m - SOM_SLO C to 1 meter gC/m^2 F
+SOM_SLO_C_TO_SOM_ACT_C - decomp. of slow soil organic ma C to active soil organic C gC/m^2/s F
+SOM_SLO_C_TO_SOM_PAS_C - decomp. of slow soil organic ma C to passive soil organic C gC/m^2/s F
+SOM_SLO_HR_S1 - Het. Resp. from slow soil organic ma gC/m^2/s F
+SOM_SLO_HR_S3 - Het. Resp. from slow soil organic ma gC/m^2/s F
+SOM_SLO_N - SOM_SLO N gN/m^2 T
+SOM_SLO_N_1m - SOM_SLO N to 1 meter gN/m^2 F
+SOM_SLO_N_TO_SOM_ACT_N - decomp. of slow soil organic ma N to active soil organic N gN/m^2 F
+SOM_SLO_N_TO_SOM_PAS_N - decomp. of slow soil organic ma N to passive soil organic N gN/m^2 F
+SUPPLEMENT_TO_SMINN - supplemental N supply gN/m^2/s T
+SWBGT - 2 m Simplified Wetbulb Globe Temp C T
+SWBGT_R - Rural 2 m Simplified Wetbulb Globe Temp C T
+SWBGT_U - Urban 2 m Simplified Wetbulb Globe Temp C T
+SWdown - atmospheric incident solar radiation W/m^2 F
+SWup - upwelling shortwave radiation W/m^2 F
+SoilAlpha - factor limiting ground evap unitless F
+SoilAlpha_U - urban factor limiting ground evap unitless F
+T10 - 10-day running mean of 2-m temperature K F
+TAF - canopy air temperature K F
+TAUX - zonal surface stress kg/m/s^2 T
+TAUY - meridional surface stress kg/m/s^2 T
+TBOT - atmospheric air temperature (downscaled to columns in glacier regions) K T
+TBUILD - internal urban building air temperature K T
+TBUILD_MAX - prescribed maximum interior building temperature K F
+TFLOOR - floor temperature K F
+TG - ground temperature K T
+TG_ICE - ground temperature (ice landunits only) K F
+TG_R - Rural ground temperature K F
+TG_U - Urban ground temperature K F
+TH2OSFC - surface water temperature K T
+THBOT - atmospheric air potential temperature (downscaled to columns in glacier regions) K T
+TKE1 - top lake level eddy thermal conductivity W/(mK) T
+TLAI - total projected leaf area index m^2/m^2 T
+TOPO_COL - column-level topographic height m F
+TOPO_COL_ICE - column-level topographic height (ice landunits only) m F
+TOTCOLC - total column carbon, incl veg and cpool but excl product pools gC/m^2 T
+TOTCOLCH4 - total belowground CH4 (0 for non-lake special landunits in the absence of dynamic landunits) gC/m2 T
+TOTCOLN - total column-level N, excluding product pools gN/m^2 T
+TOTECOSYSC - total ecosystem carbon, incl veg but excl cpool and product pools gC/m^2 T
+TOTECOSYSN - total ecosystem N, excluding product pools gN/m^2 T
+TOTLITC - total litter carbon gC/m^2 T
+TOTLITC_1m - total litter carbon to 1 meter depth gC/m^2 T
+TOTLITN - total litter N gN/m^2 T
+TOTLITN_1m - total litter N to 1 meter gN/m^2 T
+TOTSOILICE - vertically summed soil ice (veg landunits only) kg/m2 T
+TOTSOILLIQ - vertically summed soil liquid water (veg landunits only) kg/m2 T
+TOTSOMC - total soil organic matter carbon gC/m^2 T
+TOTSOMC_1m - total soil organic matter carbon to 1 meter depth gC/m^2 T
+TOTSOMN - total soil organic matter N gN/m^2 T
+TOTSOMN_1m - total soil organic matter N to 1 meter gN/m^2 T
+TOT_WOODPRODC - total wood product C gC/m^2 T
+TOT_WOODPRODC_LOSS - total loss from wood product pools gC/m^2/s T
+TOT_WOODPRODN - total wood product N gN/m^2 T
+TOT_WOODPRODN_LOSS - total loss from wood product pools gN/m^2/s T
+TRAFFICFLUX - sensible heat flux from urban traffic W/m^2 F
+TREFMNAV - daily minimum of average 2-m temperature K T
+TREFMNAV_R - Rural daily minimum of average 2-m temperature K F
+TREFMNAV_U - Urban daily minimum of average 2-m temperature K F
+TREFMXAV - daily maximum of average 2-m temperature K T
+TREFMXAV_R - Rural daily maximum of average 2-m temperature K F
+TREFMXAV_U - Urban daily maximum of average 2-m temperature K F
+TROOF_INNER - roof inside surface temperature K F
+TSA - 2m air temperature K T
+TSAI - total projected stem area index m^2/m^2 T
+TSA_ICE - 2m air temperature (ice landunits only) K F
+TSA_R - Rural 2m air temperature K F
+TSA_U - Urban 2m air temperature K F
+TSHDW_INNER - shadewall inside surface temperature K F
+TSKIN - skin temperature K T
+TSL - temperature of near-surface soil layer (natural vegetated and crop landunits only) K T
+TSOI_10CM - soil temperature in top 10cm of soil K T
+TSUNW_INNER - sunwall inside surface temperature K F
+TV - vegetation temperature K T
+TV24 - vegetation temperature (last 24hrs) K F
+TV240 - vegetation temperature (last 240hrs) K F
+TWS - total water storage mm T
+Tair - atmospheric air temperature (downscaled to columns in glacier regions) K F
+Tair_from_atm - atmospheric air temperature received from atmosphere (pre-downscaling) K F
+U10 - 10-m wind m/s T
+U10_DUST - 10-m wind for dust model m/s T
+U10_ICE - 10-m wind (ice landunits only) m/s F
+UAF - canopy air speed m/s F
+UM - wind speed plus stability effect m/s F
+URBAN_AC - urban air conditioning flux W/m^2 T
+URBAN_HEAT - urban heating flux W/m^2 T
+USTAR - aerodynamical resistance s/m F
+UST_LAKE - friction velocity (lakes only) m/s F
+VA - atmospheric wind speed plus convective velocity m/s F
+VENTILATION - sensible heat flux from building ventilation W/m^2 T
+VOLR - river channel total water storage m3 T
+VOLRMCH - river channel main channel water storage m3 T
+VPD - vpd Pa F
+VPD2M - 2m vapor pressure deficit Pa T
+VPD_CAN - canopy vapor pressure deficit kPa T
+WASTEHEAT - sensible heat flux from heating/cooling sources of urban waste heat W/m^2 T
+WBT - 2 m Stull Wet Bulb C T
+WBT_R - Rural 2 m Stull Wet Bulb C T
+WBT_U - Urban 2 m Stull Wet Bulb C T
+WIND - atmospheric wind velocity magnitude m/s T
+WTGQ - surface tracer conductance m/s T
+Wind - atmospheric wind velocity magnitude m/s F
+Z0HG - roughness length over ground, sensible heat (vegetated landunits only) m F
+Z0MG - roughness length over ground, momentum (vegetated landunits only) m F
+Z0MV_DENSE - roughness length over vegetation, momentum, for dense canopy m F
+Z0M_TO_COUPLER - roughness length, momentum: gridcell average sent to coupler m F
+Z0QG - roughness length over ground, latent heat (vegetated landunits only) m F
+ZBOT - atmospheric reference height m T
+ZETA - dimensionless stability parameter unitless F
+ZII - convective boundary height m F
+ZWT - water table depth (natural vegetated and crop landunits only) m T
+ZWT_CH4_UNSAT - depth of water table for methane production used in non-inundated area m T
+ZWT_PERCH - perched water table depth (natural vegetated and crop landunits only) m T
+num_iter - number of iterations unitless F
+QICE_FORC elevclas qice forcing sent to GLC mm/s F
+TOPO_FORC elevclas topograephic height sent to GLC m F
+TSRF_FORC elevclas surface temperature sent to GLC K F
+FATES_BURNFRAC_AP fates_levage spitfire fraction area burnt (per second) by patch age s-1 T
+FATES_CANOPYAREA_AP fates_levage canopy area by age bin per m2 land area m2 m-2 T
+FATES_FIRE_INTENSITY_BURNFRAC_AP fates_levage product of fire intensity and burned fraction, resolved by patch age (so divide by FATES_BURNF J m-1 s-1 T
+FATES_FUEL_AMOUNT_AP fates_levage spitfire ground fuel (kg carbon per m2) related to FATES_ROS (omits 1000hr fuels) within each kg m-2 T
+FATES_GPP_AP fates_levage gross primary productivity by age bin in kg carbon per m2 per second kg m-2 s-1 F
+FATES_LAI_AP fates_levage leaf area index by age bin per m2 land area m2 m-2 T
+FATES_LBLAYER_COND_AP fates_levage mean leaf boundary layer conductance - by patch age mol m-2 s-1 F
+FATES_NCL_AP fates_levage number of canopy levels by age bin F
+FATES_NPATCH_AP fates_levage number of patches by age bin F
+FATES_NPP_AP fates_levage net primary productivity by age bin in kg carbon per m2 per second kg m-2 s-1 F
+FATES_PATCHAREA_AP fates_levage patch area by age bin per m2 land area m2 m-2 T
+FATES_SECONDAREA_ANTHRODIST_AP fates_levage secondary forest patch area age distribution since anthropgenic disturbance m2 m-2 F
+FATES_SECONDAREA_DIST_AP fates_levage secondary forest patch area age distribution since any kind of disturbance m2 m-2 F
+FATES_STOMATAL_COND_AP fates_levage mean stomatal conductance - by patch age mol m-2 s-1 F
+FATES_VEGC_AP fates_levage total biomass within a given patch age bin in kg carbon per m2 land area kg m-2 F
+FATES_ZSTAR_AP fates_levage product of zstar and patch area by age bin (divide by FATES_PATCHAREA_AP to get mean zstar) m F
+FATES_FUEL_AMOUNT_APFC fates_levagefuel spitfire fuel quantity in each age x fuel class in kg carbon per m2 land area kg m-2 F
+FATES_NPP_APPF fates_levagepft NPP per PFT in each age bin in kg carbon per m2 per second kg m-2 s-1 F
+FATES_SCORCH_HEIGHT_APPF fates_levagepft SPITFIRE flame Scorch Height (calculated per PFT in each patch age bin) m F
+FATES_VEGC_APPF fates_levagepft biomass per PFT in each age bin in kg carbon per m2 kg m-2 F
+FATES_MORTALITY_AGESCEN_AC fates_levcacls age senescence mortality by cohort age in number of plants per m2 per year m-2 yr-1 T
+FATES_NPLANT_AC fates_levcacls number of plants per m2 by cohort age class m-2 T
+FATES_CROWNAREA_CL fates_levcan total crown area in each canopy layer m2 m-2 T
+FATES_FABD_SHA_TOPLF_CL fates_levcan shade fraction of direct light absorbed by the top leaf layer of each canopy layer 1 F
+FATES_FABD_SUN_TOPLF_CL fates_levcan sun fraction of direct light absorbed by the top leaf layer of each canopy layer 1 F
+FATES_FABI_SHA_TOPLF_CL fates_levcan shade fraction of indirect light absorbed by the top leaf layer of each canopy layer 1 F
+FATES_FABI_SUN_TOPLF_CL fates_levcan sun fraction of indirect light absorbed by the top leaf layer of each canopy layer 1 F
+FATES_LAISHA_TOP_CL fates_levcan LAI in the shade by the top leaf layer of each canopy layer m2 m-2 F
+FATES_LAISUN_TOP_CL fates_levcan LAI in the sun by the top leaf layer of each canopy layer m2 m-2 F
+FATES_PARSHA_Z_CL fates_levcan PAR absorbed in the shade by top leaf layer in each canopy layer W m-2 F
+FATES_PARSUN_Z_CL fates_levcan PAR absorbed in the sun by top leaf layer in each canopy layer W m-2 F
+FATES_MORTALITY_AGESCEN_ACPF fates_levcapf age senescence mortality by pft/cohort age in number of plants per m2 per year m-2 yr-1 F
+FATES_NPLANT_ACPF fates_levcapf stem number density by pft and age class m-2 F
+FATES_CROWNAREA_CLLL fates_levcnlf total crown area that is occupied by leaves in each canopy and leaf layer m2 m-2 F
+FATES_FABD_SHA_CLLL fates_levcnlf shade fraction of direct light absorbed by each canopy and leaf layer 1 F
+FATES_FABD_SUN_CLLL fates_levcnlf sun fraction of direct light absorbed by each canopy and leaf layer 1 F
+FATES_FABI_SHA_CLLL fates_levcnlf shade fraction of indirect light absorbed by each canopy and leaf layer 1 F
+FATES_FABI_SUN_CLLL fates_levcnlf sun fraction of indirect light absorbed by each canopy and leaf layer 1 F
+FATES_LAISHA_Z_CLLL fates_levcnlf LAI in the shade by each canopy and leaf layer m2 m-2 F
+FATES_LAISUN_Z_CLLL fates_levcnlf LAI in the sun by each canopy and leaf layer m2 m-2 F
+FATES_NET_C_UPTAKE_CLLL fates_levcnlf net carbon uptake in kg carbon per m2 per second by each canopy and leaf layer per unit ground kg m-2 s-1 F
+FATES_PARPROF_DIF_CLLL fates_levcnlf radiative profile of diffuse PAR through each canopy and leaf layer (averaged across PFTs) W m-2 F
+FATES_PARPROF_DIR_CLLL fates_levcnlf radiative profile of direct PAR through each canopy and leaf layer (averaged across PFTs) W m-2 F
+FATES_PARSHA_Z_CLLL fates_levcnlf PAR absorbed in the shade by each canopy and leaf layer W m-2 F
+FATES_PARSUN_Z_CLLL fates_levcnlf PAR absorbed in the sun by each canopy and leaf layer W m-2 F
+FATES_FABD_SHA_CLLLPF fates_levcnlfpf shade fraction of direct light absorbed by each canopy, leaf, and PFT 1 F
+FATES_FABD_SUN_CLLLPF fates_levcnlfpf sun fraction of direct light absorbed by each canopy, leaf, and PFT 1 F
+FATES_FABI_SHA_CLLLPF fates_levcnlfpf shade fraction of indirect light absorbed by each canopy, leaf, and PFT 1 F
+FATES_FABI_SUN_CLLLPF fates_levcnlfpf sun fraction of indirect light absorbed by each canopy, leaf, and PFT 1 F
+FATES_LAISHA_Z_CLLLPF fates_levcnlfpf LAI in the shade by each canopy, leaf, and PFT m2 m-2 F
+FATES_LAISUN_Z_CLLLPF fates_levcnlfpf LAI in the sun by each canopy, leaf, and PFT m2 m-2 F
+FATES_PARPROF_DIF_CLLLPF fates_levcnlfpf radiative profile of diffuse PAR through each canopy, leaf, and PFT W m-2 F
+FATES_PARPROF_DIR_CLLLPF fates_levcnlfpf radiative profile of direct PAR through each canopy, leaf, and PFT W m-2 F
+FATES_PARSHA_Z_CLLLPF fates_levcnlfpf PAR absorbed in the shade by each canopy, leaf, and PFT W m-2 F
+FATES_PARSUN_Z_CLLLPF fates_levcnlfpf PAR absorbed in the sun by each canopy, leaf, and PFT W m-2 F
+FATES_CWD_ABOVEGROUND_DC fates_levcwdsc debris class-level aboveground coarse woody debris stocks in kg carbon per m2 kg m-2 F
+FATES_CWD_ABOVEGROUND_IN_DC fates_levcwdsc debris class-level aboveground coarse woody debris input in kg carbon per m2 per second kg m-2 s-1 F
+FATES_CWD_ABOVEGROUND_OUT_DC fates_levcwdsc debris class-level aboveground coarse woody debris output in kg carbon per m2 per second kg m-2 s-1 F
+FATES_CWD_BELOWGROUND_DC fates_levcwdsc debris class-level belowground coarse woody debris stocks in kg carbon per m2 kg m-2 F
+FATES_CWD_BELOWGROUND_IN_DC fates_levcwdsc debris class-level belowground coarse woody debris input in kg carbon per m2 per second kg m-2 s-1 F
+FATES_CWD_BELOWGROUND_OUT_DC fates_levcwdsc debris class-level belowground coarse woody debris output in kg carbon per m2 per second kg m-2 s-1 F
+FATES_LITTER_CWD_ELDC fates_levelcwd total mass of litter in coarse woody debris by element and coarse woody debris size kg m-2 T
+FATES_ERROR_EL fates_levelem total mass-balance error in kg per second by element kg s-1 T
+FATES_FIRE_FLUX_EL fates_levelem loss to atmosphere from fire by element in kg element per m2 per s kg m-2 s-1 T
+FATES_LITTER_AG_CWD_EL fates_levelem mass of aboveground litter in coarse woody debris (trunks/branches/twigs) by element kg m-2 T
+FATES_LITTER_AG_FINE_EL fates_levelem mass of aboveground litter in fines (leaves, nonviable seed) by element kg m-2 T
+FATES_LITTER_BG_CWD_EL fates_levelem mass of belowground litter in coarse woody debris (coarse roots) by element kg m-2 T
+FATES_LITTER_BG_FINE_EL fates_levelem mass of belowground litter in fines (fineroots) by element kg m-2 T
+FATES_LITTER_IN_EL fates_levelem litter flux in in kg element per m2 per second kg m-2 s-1 T
+FATES_LITTER_OUT_EL fates_levelem litter flux out (exudation, fragmentation and seed decay) in kg element kg m-2 s-1 T
+FATES_SEEDS_IN_EXTERN_EL fates_levelem external seed influx rate in kg element per m2 per second kg m-2 s-1 T
+FATES_SEEDS_IN_LOCAL_EL fates_levelem within-site, element-level seed production rate in kg element per m2 per second kg m-2 s-1 T
+FATES_SEED_BANK_EL fates_levelem element-level total seed mass of all PFTs in kg element per m2 kg m-2 T
+FATES_SEED_DECAY_EL fates_levelem seed mass decay (germinated and un-germinated) in kg element per m2 per second kg m-2 s-1 T
+FATES_SEED_GERM_EL fates_levelem element-level total germinated seed mass of all PFTs in kg element per m2 kg m-2 T
+FATES_FUEL_AMOUNT_FC fates_levfuel spitfire fuel-class level fuel amount in kg carbon per m2 land area kg m-2 T
+FATES_FUEL_BURNT_BURNFRAC_FC fates_levfuel product of fraction (0-1) of fuel burnt and burnt fraction (divide by FATES_BURNFRAC to get bu 1 T
+FATES_FUEL_MOISTURE_FC fates_levfuel spitfire fuel class-level fuel moisture (volumetric) m3 m-3 T
+FATES_CANOPYAREA_HT fates_levheight canopy area height distribution m2 m-2 T
+FATES_LEAFAREA_HT fates_levheight leaf area height distribution m2 m-2 T
+FATES_CANOPYCROWNAREA_PF fates_levpft total PFT-level canopy-layer crown area per m2 land area m2 m-2 T
+FATES_CROWNAREA_PF fates_levpft total PFT-level crown area per m2 land area m2 m-2 T
+FATES_DAYSINCE_DROUGHTLEAFOFF_PF fates_levpft PFT-level days elapsed since drought leaf drop days T
+FATES_DAYSINCE_DROUGHTLEAFON_PF fates_levpft PFT-level days elapsed since drought leaf flush days T
+FATES_DROUGHT_STATUS_PF fates_levpft PFT-level drought status, <2 too dry for leaves, >=2 not too dry T
+FATES_ELONG_FACTOR_PF fates_levpft PFT-level mean elongation factor (partial flushing/abscission) 1 T
+FATES_GPP_PF fates_levpft total PFT-level GPP in kg carbon per m2 land area per second kg m-2 s-1 T
+FATES_GPP_SE_PF fates_levpft total PFT-level GPP in kg carbon per m2 land area per second, secondary patches kg m-2 s-1 T
+FATES_LEAFC_PF fates_levpft total PFT-level leaf biomass in kg carbon per m2 land area kg m-2 T
+FATES_MEANLIQVOL_DROUGHTPHEN_PF fates_levpft PFT-level mean liquid water volume for drought phenolgy m3 m-3 T
+FATES_MEANSMP_DROUGHTPHEN_PF fates_levpft PFT-level mean soil matric potential for drought phenology Pa T
+FATES_MORTALITY_CFLUX_PF fates_levpft PFT-level flux of biomass carbon from live to dead pool from mortality kg m-2 s-1 T
+FATES_MORTALITY_CSTARV_CFLUX_PF fates_levpft PFT-level flux of biomass carbon from live to dead pool from carbon starvation mortality kg m-2 s-1 T
+FATES_MORTALITY_FIRE_CFLUX_PF fates_levpft PFT-level flux of biomass carbon from live to dead pool from fire mortality kg m-2 s-1 T
+FATES_MORTALITY_HYDRO_CFLUX_PF fates_levpft PFT-level flux of biomass carbon from live to dead pool from hydraulic failure mortality kg m-2 s-1 T
+FATES_MORTALITY_PF fates_levpft PFT-level mortality rate in number of individuals per m2 land area per year m-2 yr-1 T
+FATES_NPLANT_PF fates_levpft total PFT-level number of individuals per m2 land area m-2 T
+FATES_NPLANT_SEC_PF fates_levpft total PFT-level number of individuals per m2 land area, secondary patches m-2 T
+FATES_NPP_PF fates_levpft total PFT-level NPP in kg carbon per m2 land area per second kg m-2 s-1 T
+FATES_NPP_SE_PF fates_levpft total PFT-level NPP in kg carbon per m2 land area per second, secondary patches kg m-2 yr-1 T
+FATES_RECRUITMENT_PF fates_levpft PFT-level recruitment rate in number of individuals per m2 land area per year m-2 yr-1 T
+FATES_STOREC_PF fates_levpft total PFT-level stored biomass in kg carbon per m2 land area kg m-2 T
+FATES_VEGC_PF fates_levpft total PFT-level biomass in kg of carbon per land area kg m-2 T
+FATES_VEGC_SE_PF fates_levpft total PFT-level biomass in kg of carbon per land area, secondary patches kg m-2 T
+FATES_DDBH_CANOPY_SZAP fates_levscag growth rate of canopy plants in meters DBH per m2 per year in canopy in each size x age class m m-2 yr-1 F
+FATES_DDBH_USTORY_SZAP fates_levscag growth rate of understory plants in meters DBH per m2 per year in each size x age class m m-2 yr-1 F
+FATES_MORTALITY_CANOPY_SZAP fates_levscag mortality rate of canopy plants in number of plants per m2 per year in each size x age class m-2 yr-1 F
+FATES_MORTALITY_USTORY_SZAP fates_levscag mortality rate of understory plants in number of plants per m2 per year in each size x age cla m-2 yr-1 F
+FATES_NPLANT_CANOPY_SZAP fates_levscag number of plants per m2 in canopy in each size x age class m-2 F
+FATES_NPLANT_SZAP fates_levscag number of plants per m2 in each size x age class m-2 F
+FATES_NPLANT_USTORY_SZAP fates_levscag number of plants per m2 in understory in each size x age class m-2 F
+FATES_NPLANT_SZAPPF fates_levscagpf number of plants per m2 in each size x age x pft class m-2 F
+FATES_BASALAREA_SZ fates_levscls basal area by size class m2 m-2 T
+FATES_CROOTMAINTAR_CANOPY_SZ fates_levscls live coarse root maintenance autotrophic respiration for canopy plants in kg carbon per m2 per kg m-2 s-1 F
+FATES_CROOTMAINTAR_USTORY_SZ fates_levscls live coarse root maintenance autotrophic respiration for understory plants in kg carbon per m2 kg m-2 s-1 F
+FATES_CROWNAREA_CANOPY_SZ fates_levscls total crown area of canopy plants by size class m2 m-2 F
+FATES_CROWNAREA_USTORY_SZ fates_levscls total crown area of understory plants by size class m2 m-2 F
+FATES_DDBH_CANOPY_SZ fates_levscls diameter growth increment by size of canopy plants m m-2 yr-1 T
+FATES_DDBH_USTORY_SZ fates_levscls diameter growth increment by size of understory plants m m-2 yr-1 T
+FATES_DEMOTION_RATE_SZ fates_levscls demotion rate from canopy to understory by size class in number of plants per m2 per year m-2 yr-1 F
+FATES_FROOTCTURN_CANOPY_SZ fates_levscls fine root turnover (non-mortal) for canopy plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_FROOTCTURN_USTORY_SZ fates_levscls fine root turnover (non-mortal) for understory plants by size class in kg carbon per m2 per se kg m-2 s-1 F
+FATES_FROOTMAINTAR_CANOPY_SZ fates_levscls live coarse root maintenance autotrophic respiration for canopy plants in kg carbon per m2 per kg m-2 s-1 F
+FATES_FROOTMAINTAR_USTORY_SZ fates_levscls fine root maintenance autotrophic respiration for understory plants in kg carbon per m2 per se kg m-2 s-1 F
+FATES_FROOT_ALLOC_CANOPY_SZ fates_levscls allocation to fine root C for canopy plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_FROOT_ALLOC_USTORY_SZ fates_levscls allocation to fine roots for understory plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_GROWAR_CANOPY_SZ fates_levscls growth autotrophic respiration of canopy plants in kg carbon per m2 per second by size kg m-2 s-1 F
+FATES_GROWAR_USTORY_SZ fates_levscls growth autotrophic respiration of understory plants in kg carbon per m2 per second by size kg m-2 s-1 F
+FATES_LAI_CANOPY_SZ fates_levscls leaf area index (LAI) of canopy plants by size class m2 m-2 T
+FATES_LAI_USTORY_SZ fates_levscls leaf area index (LAI) of understory plants by size class m2 m-2 T
+FATES_LEAFCTURN_CANOPY_SZ fates_levscls leaf turnover (non-mortal) for canopy plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_LEAFCTURN_USTORY_SZ fates_levscls leaf turnover (non-mortal) for understory plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_LEAF_ALLOC_CANOPY_SZ fates_levscls allocation to leaves for canopy plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_LEAF_ALLOC_USTORY_SZ fates_levscls allocation to leaves for understory plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_LSTEMMAINTAR_CANOPY_SZ fates_levscls live stem maintenance autotrophic respiration for canopy plants in kg carbon per m2 per second kg m-2 s-1 F
+FATES_LSTEMMAINTAR_USTORY_SZ fates_levscls live stem maintenance autotrophic respiration for understory plants in kg carbon per m2 per se kg m-2 s-1 F
+FATES_M3_MORTALITY_CANOPY_SZ fates_levscls C starvation mortality of canopy plants by size N/ha/yr F
+FATES_M3_MORTALITY_USTORY_SZ fates_levscls C starvation mortality of understory plants by size N/ha/yr F
+FATES_MAINTAR_CANOPY_SZ fates_levscls maintenance autotrophic respiration of canopy plants in kg carbon per m2 per second by size kg m-2 s-1 F
+FATES_MAINTAR_USTORY_SZ fates_levscls maintenance autotrophic respiration of understory plants in kg carbon per m2 per second by siz kg m-2 s-1 F
+FATES_MORTALITY_AGESCEN_SE_SZ fates_levscls age senescence mortality by size in number of plants per m2 per year, secondary patches m-2 yr-1 T
+FATES_MORTALITY_AGESCEN_SZ fates_levscls age senescence mortality by size in number of plants per m2 per year m-2 yr-1 T
+FATES_MORTALITY_BACKGROUND_SE_SZ fates_levscls background mortality by size in number of plants per m2 per year, secondary patches m-2 yr-1 T
+FATES_MORTALITY_BACKGROUND_SZ fates_levscls background mortality by size in number of plants per m2 per year m-2 yr-1 T
+FATES_MORTALITY_CANOPY_SE_SZ fates_levscls total mortality of canopy trees by size class in number of plants per m2, secondary patches m-2 yr-1 T
+FATES_MORTALITY_CANOPY_SZ fates_levscls total mortality of canopy trees by size class in number of plants per m2 m-2 yr-1 T
+FATES_MORTALITY_CSTARV_SE_SZ fates_levscls carbon starvation mortality by size in number of plants per m2 per year, secondary patches m-2 yr-1 T
+FATES_MORTALITY_CSTARV_SZ fates_levscls carbon starvation mortality by size in number of plants per m2 per year m-2 yr-1 T
+FATES_MORTALITY_FIRE_SZ fates_levscls fire mortality by size in number of plants per m2 per year m-2 yr-1 T
+FATES_MORTALITY_FREEZING_SE_SZ fates_levscls freezing mortality by size in number of plants per m2 per event, secondary patches m-2 event-1 T
+FATES_MORTALITY_FREEZING_SZ fates_levscls freezing mortality by size in number of plants per m2 per year m-2 yr-1 T
+FATES_MORTALITY_HYDRAULIC_SE_SZ fates_levscls hydraulic mortality by size in number of plants per m2 per year, secondary patches m-2 yr-1 T
+FATES_MORTALITY_HYDRAULIC_SZ fates_levscls hydraulic mortality by size in number of plants per m2 per year m-2 yr-1 T
+FATES_MORTALITY_IMPACT_SZ fates_levscls impact mortality by size in number of plants per m2 per year m-2 yr-1 T
+FATES_MORTALITY_LOGGING_SE_SZ fates_levscls logging mortality by size in number of plants per m2 per event, secondary patches m-2 yr-1 T
+FATES_MORTALITY_LOGGING_SZ fates_levscls logging mortality by size in number of plants per m2 per year m-2 yr-1 T
+FATES_MORTALITY_SENESCENCE_SE_SZ fates_levscls senescence mortality by size in number of plants per m2 per event, secondary patches m-2 yr-1 T
+FATES_MORTALITY_SENESCENCE_SZ fates_levscls senescence mortality by size in number of plants per m2 per year m-2 yr-1 T
+FATES_MORTALITY_TERMINATION_SZ fates_levscls termination mortality by size in number of plants per m2 per year m-2 yr-1 T
+FATES_MORTALITY_USTORY_SZ fates_levscls total mortality of understory trees by size class in individuals per m2 per year m-2 yr-1 T
+FATES_NPLANT_CANOPY_SZ fates_levscls number of canopy plants per m2 by size class m-2 T
+FATES_NPLANT_SZ fates_levscls number of plants per m2 by size class m-2 T
+FATES_NPLANT_USTORY_SZ fates_levscls number of understory plants per m2 by size class m-2 T
+FATES_NPP_CANOPY_SZ fates_levscls NPP of canopy plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_NPP_USTORY_SZ fates_levscls NPP of understory plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_PROMOTION_RATE_SZ fates_levscls promotion rate from understory to canopy by size class m-2 yr-1 F
+FATES_RDARK_CANOPY_SZ fates_levscls dark respiration for canopy plants in kg carbon per m2 per second by size kg m-2 s-1 F
+FATES_RDARK_USTORY_SZ fates_levscls dark respiration for understory plants in kg carbon per m2 per second by size kg m-2 s-1 F
+FATES_SAI_CANOPY_SZ fates_levscls stem area index (SAI) of canopy plants by size class m2 m-2 F
+FATES_SAI_USTORY_SZ fates_levscls stem area index (SAI) of understory plants by size class m2 m-2 F
+FATES_SAPWOODCTURN_CANOPY_SZ fates_levscls sapwood turnover (non-mortal) for canopy plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_SAPWOODCTURN_USTORY_SZ fates_levscls sapwood C turnover (non-mortal) for understory plants by size class in kg carbon per m2 per se kg m-2 s-1 F
+FATES_SAPWOOD_ALLOC_CANOPY_SZ fates_levscls allocation to sapwood C for canopy plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_SAPWOOD_ALLOC_USTORY_SZ fates_levscls allocation to sapwood C for understory plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_SEED_ALLOC_CANOPY_SZ fates_levscls allocation to reproductive C for canopy plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_SEED_ALLOC_USTORY_SZ fates_levscls allocation to reproductive C for understory plants by size class in kg carbon per m2 per secon kg m-2 s-1 F
+FATES_SEED_PROD_CANOPY_SZ fates_levscls seed production of canopy plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_SEED_PROD_USTORY_SZ fates_levscls seed production of understory plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_STORECTURN_CANOPY_SZ fates_levscls storage turnover (non-mortal) for canopy plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_STORECTURN_USTORY_SZ fates_levscls storage C turnover (non-mortal) for understory plants by size class in kg carbon per m2 per se kg m-2 s-1 F
+FATES_STORE_ALLOC_CANOPY_SZ fates_levscls allocation to storage C for canopy plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_STORE_ALLOC_USTORY_SZ fates_levscls allocation to storage C for understory plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_STRUCTCTURN_CANOPY_SZ fates_levscls structural C turnover (non-mortal) for canopy plants by size class in kg carbon per m2 per sec kg m-2 s-1 F
+FATES_STRUCTCTURN_USTORY_SZ fates_levscls structural C turnover (non-mortal) for understory plants by size class in kg carbon per m2 per kg m-2 s-1 F
+FATES_STRUCT_ALLOC_CANOPY_SZ fates_levscls allocation to structural C for canopy plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_STRUCT_ALLOC_USTORY_SZ fates_levscls allocation to structural C for understory plants by size class in kg carbon per m2 per second kg m-2 s-1 F
+FATES_TRIMMING_CANOPY_SZ fates_levscls trimming term of canopy plants weighted by plant density, by size class m-2 F
+FATES_TRIMMING_USTORY_SZ fates_levscls trimming term of understory plants weighted by plant density, by size class m-2 F
+FATES_VEGC_ABOVEGROUND_SZ fates_levscls aboveground biomass by size class in kg carbon per m2 kg m-2 T
+FATES_VEGC_SZ fates_levscls total biomass by size class in kg carbon per m2 kg m-2 F
+FATES_YESTCANLEV_CANOPY_SZ fates_levscls yesterdays canopy level for canopy plants by size class in number of plants per m2 m-2 F
+FATES_YESTCANLEV_USTORY_SZ fates_levscls yesterdays canopy level for understory plants by size class in number of plants per m2 m-2 F
+FATES_ABOVEGROUND_MORT_SZPF fates_levscpf Aboveground flux of carbon from AGB to necromass due to mortality kg m-2 s-1 F
+FATES_ABOVEGROUND_PROD_SZPF fates_levscpf Aboveground carbon productivity kg m-2 s-1 F
+FATES_AGSAPMAINTAR_SZPF fates_levscpf above-ground sapwood maintenance autotrophic respiration in kg carbon per m2 per second by pft kg m-2 s-1 F
+FATES_AGSAPWOOD_ALLOC_SZPF fates_levscpf allocation to above-ground sapwood by pft/size in kg carbon per m2 per second kg m-2 s-1 F
+FATES_AGSTRUCT_ALLOC_SZPF fates_levscpf allocation to above-ground structural (deadwood) by pft/size in kg carbon per m2 per second kg m-2 s-1 F
+FATES_AUTORESP_CANOPY_SZPF fates_levscpf autotrophic respiration of canopy plants by pft/size in kg carbon per m2 per second kg m-2 s-1 F
+FATES_AUTORESP_SZPF fates_levscpf total autotrophic respiration in kg carbon per m2 per second by pft/size kg m-2 s-1 F
+FATES_AUTORESP_USTORY_SZPF fates_levscpf autotrophic respiration of understory plants by pft/size in kg carbon per m2 per second kg m-2 s-1 F
+FATES_BASALAREA_SZPF fates_levscpf basal area by pft/size m2 m-2 F
+FATES_BGSAPMAINTAR_SZPF fates_levscpf below-ground sapwood maintenance autotrophic respiration in kg carbon per m2 per second by pft kg m-2 s-1 F
+FATES_BGSAPWOOD_ALLOC_SZPF fates_levscpf allocation to below-ground sapwood by pft/size in kg carbon per m2 per second kg m-2 s-1 F
+FATES_BGSTRUCT_ALLOC_SZPF fates_levscpf allocation to below-ground structural (deadwood) by pft/size in kg carbon per m2 per second kg m-2 s-1 F
+FATES_C13DISC_SZPF fates_levscpf C13 discrimination by pft/size per mil F
+FATES_DDBH_CANOPY_SZPF fates_levscpf diameter growth increment by pft/size m m-2 yr-1 F
+FATES_DDBH_SZPF fates_levscpf diameter growth increment by pft/size m m-2 yr-1 F
+FATES_DDBH_USTORY_SZPF fates_levscpf diameter growth increment by pft/size m m-2 yr-1 F
+FATES_FROOTC_SZPF fates_levscpf fine-root carbon mass by size-class x pft in kg carbon per m2 kg m-2 F
+FATES_FROOTMAINTAR_SZPF fates_levscpf fine root maintenance autotrophic respiration in kg carbon per m2 per second by pft/size kg m-2 s-1 F
+FATES_FROOT_ALLOC_SZPF fates_levscpf allocation to fine roots by pft/size in kg carbon per m2 per second kg m-2 s-1 F
+FATES_GPP_CANOPY_SZPF fates_levscpf gross primary production of canopy plants by pft/size in kg carbon per m2 per second kg m-2 s-1 F
+FATES_GPP_SZPF fates_levscpf gross primary production by pft/size in kg carbon per m2 per second kg m-2 s-1 F
+FATES_GPP_USTORY_SZPF fates_levscpf gross primary production of understory plants by pft/size in kg carbon per m2 per second kg m-2 s-1 F
+FATES_GROWAR_SZPF fates_levscpf growth autotrophic respiration in kg carbon per m2 per second by pft/size kg m-2 s-1 F
+FATES_GROWTHFLUX_FUSION_SZPF fates_levscpf flux of individuals into a given size class bin via fusion m-2 yr-1 F
+FATES_GROWTHFLUX_SZPF fates_levscpf flux of individuals into a given size class bin via growth and recruitment m-2 yr-1 F
+FATES_LAI_CANOPY_SZPF fates_levscpf Leaf area index (LAI) of canopy plants by pft/size m2 m-2 F
+FATES_LAI_USTORY_SZPF fates_levscpf Leaf area index (LAI) of understory plants by pft/size m2 m-2 F
+FATES_LEAFC_CANOPY_SZPF fates_levscpf biomass in leaves of canopy plants by pft/size in kg carbon per m2 kg m-2 F
+FATES_LEAFC_SZPF fates_levscpf leaf carbon mass by size-class x pft in kg carbon per m2 kg m-2 F
+FATES_LEAFC_USTORY_SZPF fates_levscpf biomass in leaves of understory plants by pft/size in kg carbon per m2 kg m-2 F
+FATES_LEAF_ALLOC_SZPF fates_levscpf allocation to leaves by pft/size in kg carbon per m2 per second kg m-2 s-1 F
+FATES_M3_MORTALITY_CANOPY_SZPF fates_levscpf C starvation mortality of canopy plants by pft/size N/ha/yr F
+FATES_M3_MORTALITY_USTORY_SZPF fates_levscpf C starvation mortality of understory plants by pft/size N/ha/yr F
+FATES_MAINTAR_SZPF fates_levscpf maintenance autotrophic respiration in kg carbon per m2 per second by pft/size kg m-2 s-1 F
+FATES_MORTALITY_AGESCEN_SZPF fates_levscpf age senescence mortality by pft/size in number of plants per m2 per year m-2 yr-1 F
+FATES_MORTALITY_BACKGROUND_SZPF fates_levscpf background mortality by pft/size in number of plants per m2 per year m-2 yr-1 F
+FATES_MORTALITY_CAMBIALBURN_SZPF fates_levscpf fire mortality from cambial burn by pft/size in number of plants per m2 per year m-2 yr-1 F
+FATES_MORTALITY_CANOPY_SZPF fates_levscpf total mortality of canopy plants by pft/size in number of plants per m2 per year m-2 yr-1 F
+FATES_MORTALITY_CROWNSCORCH_SZPF fates_levscpf fire mortality from crown scorch by pft/size in number of plants per m2 per year m-2 yr-1 F
+FATES_MORTALITY_CSTARV_SZPF fates_levscpf carbon starvation mortality by pft/size in number of plants per m2 per year m-2 yr-1 F
+FATES_MORTALITY_FIRE_SZPF fates_levscpf fire mortality by pft/size in number of plants per m2 per year m-2 yr-1 F
+FATES_MORTALITY_FREEZING_SZPF fates_levscpf freezing mortality by pft/size in number of plants per m2 per year m-2 yr-1 F
+FATES_MORTALITY_HYDRAULIC_SZPF fates_levscpf hydraulic mortality by pft/size in number of plants per m2 per year m-2 yr-1 F
+FATES_MORTALITY_IMPACT_SZPF fates_levscpf impact mortality by pft/size in number of plants per m2 per year m-2 yr-1 F
+FATES_MORTALITY_LOGGING_SZPF fates_levscpf logging mortality by pft/size in number of plants per m2 per year m-2 yr-1 F
+FATES_MORTALITY_SENESCENCE_SZPF fates_levscpf senescence mortality by pft/size in number of plants per m2 per year m-2 yr-1 F
+FATES_MORTALITY_TERMINATION_SZPF fates_levscpf termination mortality by pft/size in number pf plants per m2 per year m-2 yr-1 F
+FATES_MORTALITY_USTORY_SZPF fates_levscpf total mortality of understory plants by pft/size in number of plants per m2 per year m-2 yr-1 F
+FATES_NPLANT_CANOPY_SZPF fates_levscpf number of canopy plants by size/pft per m2 m-2 F
+FATES_NPLANT_SZPF fates_levscpf stem number density by pft/size m-2 F
+FATES_NPLANT_USTORY_SZPF fates_levscpf density of understory plants by pft/size in number of plants per m2 m-2 F
+FATES_NPP_SZPF fates_levscpf total net primary production by pft/size in kg carbon per m2 per second kg m-2 s-1 F
+FATES_RDARK_SZPF fates_levscpf dark portion of maintenance autotrophic respiration in kg carbon per m2 per second by pft/size kg m-2 s-1 F
+FATES_REPROC_SZPF fates_levscpf reproductive carbon mass (on plant) by size-class x pft in kg carbon per m2 kg m-2 F
+FATES_SAPWOODC_SZPF fates_levscpf sapwood carbon mass by size-class x pft in kg carbon per m2 kg m-2 F
+FATES_SEED_ALLOC_SZPF fates_levscpf allocation to seeds by pft/size in kg carbon per m2 per second kg m-2 s-1 F
+FATES_STOREC_CANOPY_SZPF fates_levscpf biomass in storage pools of canopy plants by pft/size in kg carbon per m2 kg m-2 F
+FATES_STOREC_SZPF fates_levscpf storage carbon mass by size-class x pft in kg carbon per m2 kg m-2 F
+FATES_STOREC_TF_CANOPY_SZPF fates_levscpf Storage C fraction of target by size x pft, in the canopy kg kg-1 F
+FATES_STOREC_TF_USTORY_SZPF fates_levscpf Storage C fraction of target by size x pft, in the understory kg kg-1 F
+FATES_STOREC_USTORY_SZPF fates_levscpf biomass in storage pools of understory plants by pft/size in kg carbon per m2 kg m-2 F
+FATES_STORE_ALLOC_SZPF fates_levscpf allocation to storage C by pft/size in kg carbon per m2 per second kg m-2 s-1 F
+FATES_VEGC_ABOVEGROUND_SZPF fates_levscpf aboveground biomass by pft/size in kg carbon per m2 kg m-2 F
+FATES_VEGC_SZPF fates_levscpf total vegetation biomass in live plants by size-class x pft in kg carbon per m2 kg m-2 F
+ACTUAL_IMMOB_NH4 levdcmp immobilization of NH4 gN/m^3/s F
+ACTUAL_IMMOB_NO3 levdcmp immobilization of NO3 gN/m^3/s F
+ACTUAL_IMMOB_vr levdcmp actual N immobilization gN/m^3/s F
+FMAX_DENIT_CARBONSUBSTRATE levdcmp FMAX_DENIT_CARBONSUBSTRATE gN/m^3/s F
+FMAX_DENIT_NITRATE levdcmp FMAX_DENIT_NITRATE gN/m^3/s F
+FPI_vr levdcmp fraction of potential immobilization proportion F
+F_DENIT_BASE levdcmp F_DENIT_BASE gN/m^3/s F
+F_DENIT_vr levdcmp denitrification flux gN/m^3/s F
+F_NIT_vr levdcmp nitrification flux gN/m^3/s F
+GROSS_NMIN_vr levdcmp gross rate of N mineralization gN/m^3/s F
+K_LIT_CEL levdcmp cellulosic litter potential loss coefficient 1/s F
+K_LIT_LIG levdcmp lignin litter potential loss coefficient 1/s F
+K_LIT_MET levdcmp metabolic litter potential loss coefficient 1/s F
+K_NITR levdcmp K_NITR 1/s F
+K_NITR_H2O levdcmp K_NITR_H2O unitless F
+K_NITR_PH levdcmp K_NITR_PH unitless F
+K_NITR_T levdcmp K_NITR_T unitless F
+K_SOM_ACT levdcmp active soil organic potential loss coefficient 1/s F
+K_SOM_PAS levdcmp passive soil organic potential loss coefficient 1/s F
+K_SOM_SLO levdcmp slow soil organic ma potential loss coefficient 1/s F
+L1_PATHFRAC_S1_vr levdcmp PATHFRAC from metabolic litter to active soil organic fraction F
+L1_RESP_FRAC_S1_vr levdcmp respired from metabolic litter to active soil organic fraction F
+L2_PATHFRAC_S1_vr levdcmp PATHFRAC from cellulosic litter to active soil organic fraction F
+L2_RESP_FRAC_S1_vr levdcmp respired from cellulosic litter to active soil organic fraction F
+L3_PATHFRAC_S2_vr levdcmp PATHFRAC from lignin litter to slow soil organic ma fraction F
+L3_RESP_FRAC_S2_vr levdcmp respired from lignin litter to slow soil organic ma fraction F
+LIT_CEL_C_TNDNCY_VERT_TR levdcmp cellulosic litter C tendency due to vertical transport gC/m^3/s F
+LIT_CEL_C_TO_SOM_ACT_C_v levdcmp decomp. of cellulosic litter C to active soil organic C gC/m^3/s F
+LIT_CEL_HR_vr levdcmp Het. Resp. from cellulosic litter gC/m^3/s F
+LIT_CEL_N_TNDNCY_VERT_TR levdcmp cellulosic litter N tendency due to vertical transport gN/m^3/s F
+LIT_CEL_N_TO_SOM_ACT_N_v levdcmp decomp. of cellulosic litter N to active soil organic N gN/m^3 F
+LIT_CEL_N_vr levdcmp LIT_CEL N (vertically resolved) gN/m^3 T
+LIT_LIG_C_TNDNCY_VERT_TR levdcmp lignin litter C tendency due to vertical transport gC/m^3/s F
+LIT_LIG_C_TO_SOM_SLO_C_v levdcmp decomp. of lignin litter C to slow soil organic ma C gC/m^3/s F
+LIT_LIG_HR_vr levdcmp Het. Resp. from lignin litter gC/m^3/s F
+LIT_LIG_N_TNDNCY_VERT_TR levdcmp lignin litter N tendency due to vertical transport gN/m^3/s F
+LIT_LIG_N_TO_SOM_SLO_N_v levdcmp decomp. of lignin litter N to slow soil organic ma N gN/m^3 F
+LIT_LIG_N_vr levdcmp LIT_LIG N (vertically resolved) gN/m^3 T
+LIT_MET_C_TNDNCY_VERT_TR levdcmp metabolic litter C tendency due to vertical transport gC/m^3/s F
+LIT_MET_C_TO_SOM_ACT_C_v levdcmp decomp. of metabolic litter C to active soil organic C gC/m^3/s F
+LIT_MET_HR_vr levdcmp Het. Resp. from metabolic litter gC/m^3/s F
+LIT_MET_N_TNDNCY_VERT_TR levdcmp metabolic litter N tendency due to vertical transport gN/m^3/s F
+LIT_MET_N_TO_SOM_ACT_N_v levdcmp decomp. of metabolic litter N to active soil organic N gN/m^3 F
+LIT_MET_N_vr levdcmp LIT_MET N (vertically resolved) gN/m^3 T
+NDEP_PROF levdcmp profile for atmospheric N deposition 1/m F
+NET_NMIN_vr levdcmp net rate of N mineralization gN/m^3/s F
+NFIXATION_PROF levdcmp profile for biological N fixation 1/m F
+POTENTIAL_IMMOB_vr levdcmp potential N immobilization gN/m^3/s F
+POT_F_DENIT_vr levdcmp potential denitrification flux gN/m^3/s F
+POT_F_NIT_vr levdcmp potential nitrification flux gN/m^3/s F
+S1_PATHFRAC_S2_vr levdcmp PATHFRAC from active soil organic to slow soil organic ma fraction F
+S1_PATHFRAC_S3_vr levdcmp PATHFRAC from active soil organic to passive soil organic fraction F
+S1_RESP_FRAC_S2_vr levdcmp respired from active soil organic to slow soil organic ma fraction F
+S1_RESP_FRAC_S3_vr levdcmp respired from active soil organic to passive soil organic fraction F
+S2_PATHFRAC_S1_vr levdcmp PATHFRAC from slow soil organic ma to active soil organic fraction F
+S2_PATHFRAC_S3_vr levdcmp PATHFRAC from slow soil organic ma to passive soil organic fraction F
+S2_RESP_FRAC_S1_vr levdcmp respired from slow soil organic ma to active soil organic fraction F
+S2_RESP_FRAC_S3_vr levdcmp respired from slow soil organic ma to passive soil organic fraction F
+S3_PATHFRAC_S1_vr levdcmp PATHFRAC from passive soil organic to active soil organic fraction F
+S3_RESP_FRAC_S1_vr levdcmp respired from passive soil organic to active soil organic fraction F
+SMINN_TO_PLANT_vr levdcmp plant uptake of soil mineral N gN/m^3/s F
+SMINN_TO_S1N_L1_vr levdcmp mineral N flux for decomp. of LIT_METto SOM_ACT gN/m^3 F
+SMINN_TO_S1N_L2_vr levdcmp mineral N flux for decomp. of LIT_CELto SOM_ACT gN/m^3 F
+SMINN_TO_S1N_S2_vr levdcmp mineral N flux for decomp. of SOM_SLOto SOM_ACT gN/m^3 F
+SMINN_TO_S1N_S3_vr levdcmp mineral N flux for decomp. of SOM_PASto SOM_ACT gN/m^3 F
+SMINN_TO_S2N_L3_vr levdcmp mineral N flux for decomp. of LIT_LIGto SOM_SLO gN/m^3 F
+SMINN_TO_S2N_S1_vr levdcmp mineral N flux for decomp. of SOM_ACTto SOM_SLO gN/m^3 F
+SMINN_TO_S3N_S1_vr levdcmp mineral N flux for decomp. of SOM_ACTto SOM_PAS gN/m^3 F
+SMINN_TO_S3N_S2_vr levdcmp mineral N flux for decomp. of SOM_SLOto SOM_PAS gN/m^3 F
+SMIN_NH4_TO_PLANT levdcmp plant uptake of NH4 gN/m^3/s F
+SMIN_NO3_LEACHED_vr levdcmp soil NO3 pool loss to leaching gN/m^3/s F
+SMIN_NO3_MASSDENS levdcmp SMIN_NO3_MASSDENS ugN/cm^3 soil F
+SMIN_NO3_RUNOFF_vr levdcmp soil NO3 pool loss to runoff gN/m^3/s F
+SMIN_NO3_TO_PLANT levdcmp plant uptake of NO3 gN/m^3/s F
+SOILN_vr levdcmp SOIL N (vertically resolved) gN/m^3 T
+SOM_ACT_C_TNDNCY_VERT_TR levdcmp active soil organic C tendency due to vertical transport gC/m^3/s F
+SOM_ACT_C_TO_SOM_PAS_C_v levdcmp decomp. of active soil organic C to passive soil organic C gC/m^3/s F
+SOM_ACT_C_TO_SOM_SLO_C_v levdcmp decomp. of active soil organic C to slow soil organic ma C gC/m^3/s F
+SOM_ACT_HR_S2_vr levdcmp Het. Resp. from active soil organic gC/m^3/s F
+SOM_ACT_HR_S3_vr levdcmp Het. Resp. from active soil organic gC/m^3/s F
+SOM_ACT_N_TNDNCY_VERT_TR levdcmp active soil organic N tendency due to vertical transport gN/m^3/s F
+SOM_ACT_N_TO_SOM_PAS_N_v levdcmp decomp. of active soil organic N to passive soil organic N gN/m^3 F
+SOM_ACT_N_TO_SOM_SLO_N_v levdcmp decomp. of active soil organic N to slow soil organic ma N gN/m^3 F
+SOM_ACT_N_vr levdcmp SOM_ACT N (vertically resolved) gN/m^3 T
+SOM_ADV_COEF levdcmp advection term for vertical SOM translocation m/s F
+SOM_DIFFUS_COEF levdcmp diffusion coefficient for vertical SOM translocation m^2/s F
+SOM_PAS_C_TNDNCY_VERT_TR levdcmp passive soil organic C tendency due to vertical transport gC/m^3/s F
+SOM_PAS_C_TO_SOM_ACT_C_v levdcmp decomp. of passive soil organic C to active soil organic C gC/m^3/s F
+SOM_PAS_HR_vr levdcmp Het. Resp. from passive soil organic gC/m^3/s F
+SOM_PAS_N_TNDNCY_VERT_TR levdcmp passive soil organic N tendency due to vertical transport gN/m^3/s F
+SOM_PAS_N_TO_SOM_ACT_N_v levdcmp decomp. of passive soil organic N to active soil organic N gN/m^3 F
+SOM_PAS_N_vr levdcmp SOM_PAS N (vertically resolved) gN/m^3 T
+SOM_SLO_C_TNDNCY_VERT_TR levdcmp slow soil organic ma C tendency due to vertical transport gC/m^3/s F
+SOM_SLO_C_TO_SOM_ACT_C_v levdcmp decomp. of slow soil organic ma C to active soil organic C gC/m^3/s F
+SOM_SLO_C_TO_SOM_PAS_C_v levdcmp decomp. of slow soil organic ma C to passive soil organic C gC/m^3/s F
+SOM_SLO_HR_S1_vr levdcmp Het. Resp. from slow soil organic ma gC/m^3/s F
+SOM_SLO_HR_S3_vr levdcmp Het. Resp. from slow soil organic ma gC/m^3/s F
+SOM_SLO_N_TNDNCY_VERT_TR levdcmp slow soil organic ma N tendency due to vertical transport gN/m^3/s F
+SOM_SLO_N_TO_SOM_ACT_N_v levdcmp decomp. of slow soil organic ma N to active soil organic N gN/m^3 F
+SOM_SLO_N_TO_SOM_PAS_N_v levdcmp decomp. of slow soil organic ma N to passive soil organic N gN/m^3 F
+SOM_SLO_N_vr levdcmp SOM_SLO N (vertically resolved) gN/m^3 T
+SUPPLEMENT_TO_SMINN_vr levdcmp supplemental N supply gN/m^3/s F
+WFPS levdcmp WFPS percent F
+anaerobic_frac levdcmp anaerobic_frac m3/m3 F
+diffus levdcmp diffusivity m^2/s F
+fr_WFPS levdcmp fr_WFPS fraction F
+n2_n2o_ratio_denit levdcmp n2_n2o_ratio_denit gN/gN F
+r_psi levdcmp r_psi m F
+ratio_k1 levdcmp ratio_k1 none F
+ratio_no3_co2 levdcmp ratio_no3_co2 ratio F
+soil_bulkdensity levdcmp soil_bulkdensity kg/m3 F
+soil_co2_prod levdcmp soil_co2_prod ug C / g soil / day F
+CONC_CH4_SAT levgrnd CH4 soil Concentration for inundated / lake area mol/m3 F
+CONC_CH4_UNSAT levgrnd CH4 soil Concentration for non-inundated area mol/m3 F
+FGR_SOIL_R levgrnd Rural downward heat flux at interface below each soil layer watt/m^2 F
+HK levgrnd hydraulic conductivity (natural vegetated and crop landunits only) mm/s F
+O2_DECOMP_DEPTH_UNSAT levgrnd O2 consumption from HR and AR for non-inundated area mol/m3/s F
+SMP levgrnd soil matric potential (natural vegetated and crop landunits only) mm T
+SOILPSI levgrnd soil water potential in each soil layer MPa F
+TSOI levgrnd soil temperature (natural vegetated and crop landunits only) K T
+TSOI_ICE levgrnd soil temperature (ice landunits only) K T
+LAKEICEFRAC levlak lake layer ice mass fraction unitless F
+TLAKE levlak lake temperature K T
+SNO_ABS levsno Absorbed solar radiation in each snow layer W/m^2 F
+SNO_ABS_ICE levsno Absorbed solar radiation in each snow layer (ice landunits only) W/m^2 F
+SNO_BW levsno Partial density of water in the snow pack (ice + liquid) kg/m3 F
+SNO_BW_ICE levsno Partial density of water in the snow pack (ice + liquid, ice landunits only) kg/m3 F
+SNO_EXISTENCE levsno Fraction of averaging period for which each snow layer existed unitless F
+SNO_FRZ levsno snow freezing rate in each snow layer kg/m2/s F
+SNO_FRZ_ICE levsno snow freezing rate in each snow layer (ice landunits only) mm/s F
+SNO_GS levsno Mean snow grain size Microns F
+SNO_GS_ICE levsno Mean snow grain size (ice landunits only) Microns F
+SNO_ICE levsno Snow ice content kg/m2 F
+SNO_LIQH2O levsno Snow liquid water content kg/m2 F
+SNO_MELT levsno snow melt rate in each snow layer mm/s F
+SNO_MELT_ICE levsno snow melt rate in each snow layer (ice landunits only) mm/s F
+SNO_T levsno Snow temperatures K F
+SNO_TK levsno Thermal conductivity W/m-K F
+SNO_TK_ICE levsno Thermal conductivity (ice landunits only) W/m-K F
+SNO_T_ICE levsno Snow temperatures (ice landunits only) K F
+SNO_Z levsno Snow layer thicknesses m F
+SNO_Z_ICE levsno Snow layer thicknesses (ice landunits only) m F
+CONC_O2_SAT levsoi O2 soil Concentration for inundated / lake area mol/m3 T
+CONC_O2_UNSAT levsoi O2 soil Concentration for non-inundated area mol/m3 T
+FATES_FRAGMENTATION_SCALER_SL levsoi factor (0-1) by which litter/cwd fragmentation proceeds relative to max rate by soil layer T
+FATES_FROOTC_SL levsoi Total carbon in live plant fine-roots over depth kg m-3 T
+H2OSOI levsoi volumetric soil water (natural vegetated and crop landunits only) mm3/mm3 T
+HR_vr levsoi total vertically resolved heterotrophic respiration gC/m^3/s T
+KROOT levsoi root conductance each soil layer 1/s F
+KSOIL levsoi soil conductance in each soil layer 1/s F
+LIT_CEL_C_vr levsoi LIT_CEL C (vertically resolved) gC/m^3 T
+LIT_LIG_C_vr levsoi LIT_LIG C (vertically resolved) gC/m^3 T
+LIT_MET_C_vr levsoi LIT_MET C (vertically resolved) gC/m^3 T
+O_SCALAR levsoi fraction by which decomposition is reduced due to anoxia unitless T
+QROOTSINK levsoi water flux from soil to root in each soil-layer mm/s F
+SMINN_vr levsoi soil mineral N gN/m^3 T
+SMIN_NH4_vr levsoi soil mineral NH4 (vert. res.) gN/m^3 T
+SMIN_NO3_vr levsoi soil mineral NO3 (vert. res.) gN/m^3 T
+SOILC_vr levsoi SOIL C (vertically resolved) gC/m^3 T
+SOILICE levsoi soil ice (natural vegetated and crop landunits only) kg/m2 T
+SOILLIQ levsoi soil liquid water (natural vegetated and crop landunits only) kg/m2 T
+SOM_ACT_C_vr levsoi SOM_ACT C (vertically resolved) gC/m^3 T
+SOM_PAS_C_vr levsoi SOM_PAS C (vertically resolved) gC/m^3 T
+SOM_SLO_C_vr levsoi SOM_SLO C (vertically resolved) gC/m^3 T
+T_SCALAR levsoi temperature inhibition of decomposition unitless T
+W_SCALAR levsoi Moisture (dryness) inhibition of decomposition unitless T
+ALBD numrad surface albedo (direct) proportion F
+ALBGRD numrad ground albedo (direct) proportion F
+ALBGRI numrad ground albedo (indirect) proportion F
+ALBI numrad surface albedo (indirect) proportion F
+=================================== ================ ============================================================================================== ================================================================= =======
diff --git a/doc/source/users_guide/setting-up-and-running-a-case/history_fields_nofates.rst b/doc/source/users_guide/setting-up-and-running-a-case/history_fields_nofates.rst
new file mode 100644
index 0000000000..4e96f5fb91
--- /dev/null
+++ b/doc/source/users_guide/setting-up-and-running-a-case/history_fields_nofates.rst
@@ -0,0 +1,1288 @@
+=============================
+CTSM History Fields (nofates)
+=============================
+
+CAUTION: Not all variables are relevant / present for all CTSM cases.
+Key flags used in this CTSM case:
+use_cn = T
+use_crop = T
+use_fates = F
+
+=================================== ================ ============================================================================================== ================================================================= =======
+CTSM History Fields
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+ Variable Name Level Dim. Long Description Units Active?
+=================================== ================ ============================================================================================== ================================================================= =======
+A10TMIN - 10-day running mean of min 2-m temperature K F
+A5TMIN - 5-day running mean of min 2-m temperature K F
+ACTUAL_IMMOB - actual N immobilization gN/m^2/s T
+AGLB - Aboveground leaf biomass kg/m^2 F
+AGNPP - aboveground NPP gC/m^2/s T
+AGSB - Aboveground stem biomass kg/m^2 F
+ALPHA - alpha coefficient for VOC calc non F
+ALT - current active layer thickness m T
+ALTMAX - maximum annual active layer thickness m T
+ALTMAX_LASTYEAR - maximum prior year active layer thickness m F
+ANNAVG_T2M - annual average 2m air temperature K F
+ANNMAX_RETRANSN - annual max of retranslocated N pool gN/m^2 F
+ANNSUM_COUNTER - seconds since last annual accumulator turnover s F
+ANNSUM_NPP - annual sum of NPP gC/m^2/yr F
+ANNSUM_POTENTIAL_GPP - annual sum of potential GPP gN/m^2/yr F
+AR - autotrophic respiration (MR + GR) gC/m^2/s T
+ATM_O3 - atmospheric ozone partial pressure mol/mol F
+ATM_TOPO - atmospheric surface height m T
+AVAILC - C flux available for allocation gC/m^2/s F
+AVAIL_RETRANSN - N flux available from retranslocation pool gN/m^2/s F
+AnnET - Annual ET mm/s F
+BAF_CROP - fractional area burned for crop s-1 T
+BAF_PEATF - fractional area burned in peatland s-1 T
+BCDEP - total BC deposition (dry+wet) from atmosphere kg/m^2/s T
+BETA - coefficient of convective velocity none F
+BGLFR - background litterfall rate 1/s F
+BGNPP - belowground NPP gC/m^2/s T
+BGTR - background transfer growth rate 1/s F
+BTRANMN - daily minimum of transpiration beta factor unitless T
+CANNAVG_T2M - annual average of 2m air temperature K F
+CANNSUM_NPP - annual sum of column-level NPP gC/m^2/s F
+CGRND - deriv. of soil energy flux wrt to soil temp W/m^2/K F
+CGRNDL - deriv. of soil latent heat flux wrt soil temp W/m^2/K F
+CGRNDS - deriv. of soil sensible heat flux wrt soil temp W/m^2/K F
+CH4PROD - Gridcell total production of CH4 gC/m2/s T
+CH4_EBUL_TOTAL_SAT - ebullition surface CH4 flux; (+ to atm) mol/m2/s F
+CH4_EBUL_TOTAL_UNSAT - ebullition surface CH4 flux; (+ to atm) mol/m2/s F
+CH4_SURF_AERE_SAT - aerenchyma surface CH4 flux for inundated area; (+ to atm) mol/m2/s T
+CH4_SURF_AERE_UNSAT - aerenchyma surface CH4 flux for non-inundated area; (+ to atm) mol/m2/s T
+CH4_SURF_DIFF_SAT - diffusive surface CH4 flux for inundated / lake area; (+ to atm) mol/m2/s T
+CH4_SURF_DIFF_UNSAT - diffusive surface CH4 flux for non-inundated area; (+ to atm) mol/m2/s T
+CH4_SURF_EBUL_SAT - ebullition surface CH4 flux for inundated / lake area; (+ to atm) mol/m2/s T
+CH4_SURF_EBUL_UNSAT - ebullition surface CH4 flux for non-inundated area; (+ to atm) mol/m2/s T
+COL_CTRUNC - column-level sink for C truncation gC/m^2 F
+COL_FIRE_CLOSS - total column-level fire C loss for non-peat fires outside land-type converted region gC/m^2/s T
+COL_FIRE_NLOSS - total column-level fire N loss gN/m^2/s T
+COL_NTRUNC - column-level sink for N truncation gN/m^2 F
+COST_NACTIVE - Cost of active uptake gN/gC T
+COST_NFIX - Cost of fixation gN/gC T
+COST_NRETRANS - Cost of retranslocation gN/gC T
+COSZEN - cosine of solar zenith angle none F
+CPHASE - crop phenology phase 0-not planted, 1-planted, 2-leaf emerge, 3-grain fill, 4-harvest T
+CPOOL - temporary photosynthate C pool gC/m^2 T
+CPOOL_DEADCROOT_GR - dead coarse root growth respiration gC/m^2/s F
+CPOOL_DEADCROOT_STORAGE_GR - dead coarse root growth respiration to storage gC/m^2/s F
+CPOOL_DEADSTEM_GR - dead stem growth respiration gC/m^2/s F
+CPOOL_DEADSTEM_STORAGE_GR - dead stem growth respiration to storage gC/m^2/s F
+CPOOL_FROOT_GR - fine root growth respiration gC/m^2/s F
+CPOOL_FROOT_STORAGE_GR - fine root growth respiration to storage gC/m^2/s F
+CPOOL_LEAF_GR - leaf growth respiration gC/m^2/s F
+CPOOL_LEAF_STORAGE_GR - leaf growth respiration to storage gC/m^2/s F
+CPOOL_LIVECROOT_GR - live coarse root growth respiration gC/m^2/s F
+CPOOL_LIVECROOT_STORAGE_GR - live coarse root growth respiration to storage gC/m^2/s F
+CPOOL_LIVESTEM_GR - live stem growth respiration gC/m^2/s F
+CPOOL_LIVESTEM_STORAGE_GR - live stem growth respiration to storage gC/m^2/s F
+CPOOL_TO_DEADCROOTC - allocation to dead coarse root C gC/m^2/s F
+CPOOL_TO_DEADCROOTC_STORAGE - allocation to dead coarse root C storage gC/m^2/s F
+CPOOL_TO_DEADSTEMC - allocation to dead stem C gC/m^2/s F
+CPOOL_TO_DEADSTEMC_STORAGE - allocation to dead stem C storage gC/m^2/s F
+CPOOL_TO_FROOTC - allocation to fine root C gC/m^2/s F
+CPOOL_TO_FROOTC_STORAGE - allocation to fine root C storage gC/m^2/s F
+CPOOL_TO_GRESP_STORAGE - allocation to growth respiration storage gC/m^2/s F
+CPOOL_TO_LEAFC - allocation to leaf C gC/m^2/s F
+CPOOL_TO_LEAFC_STORAGE - allocation to leaf C storage gC/m^2/s F
+CPOOL_TO_LIVECROOTC - allocation to live coarse root C gC/m^2/s F
+CPOOL_TO_LIVECROOTC_STORAGE - allocation to live coarse root C storage gC/m^2/s F
+CPOOL_TO_LIVESTEMC - allocation to live stem C gC/m^2/s F
+CPOOL_TO_LIVESTEMC_STORAGE - allocation to live stem C storage gC/m^2/s F
+CROPPROD1C - 1-yr crop product (grain+biofuel) C gC/m^2 T
+CROPPROD1C_LOSS - loss from 1-yr crop product pool gC/m^2/s T
+CROPPROD1N - 1-yr crop product (grain+biofuel) N gN/m^2 T
+CROPPROD1N_LOSS - loss from 1-yr crop product pool gN/m^2/s T
+CROPSEEDC_DEFICIT - C used for crop seed that needs to be repaid gC/m^2 T
+CROPSEEDN_DEFICIT - N used for crop seed that needs to be repaid gN/m^2 F
+CROP_SEEDC_TO_LEAF - crop seed source to leaf gC/m^2/s F
+CROP_SEEDN_TO_LEAF - crop seed source to leaf gN/m^2/s F
+CURRENT_GR - growth resp for new growth displayed in this timestep gC/m^2/s F
+CWDC_HR - cwd C heterotrophic respiration gC/m^2/s T
+CWDC_LOSS - coarse woody debris C loss gC/m^2/s T
+CWD_C - CWD C gC/m^2 T
+CWD_C_1m - CWD C to 1 meter gC/m^2 F
+CWD_C_TO_LIT_CEL_C - decomp. of coarse woody debris C to cellulosic litter C gC/m^2/s F
+CWD_C_TO_LIT_LIG_C - decomp. of coarse woody debris C to lignin litter C gC/m^2/s F
+CWD_HR_L2 - Het. Resp. from coarse woody debris gC/m^2/s F
+CWD_HR_L3 - Het. Resp. from coarse woody debris gC/m^2/s F
+CWD_N - CWD N gN/m^2 T
+CWD_N_1m - CWD N to 1 meter gN/m^2 F
+CWD_N_TO_LIT_CEL_N - decomp. of coarse woody debris N to cellulosic litter N gN/m^2 F
+CWD_N_TO_LIT_LIG_N - decomp. of coarse woody debris N to lignin litter N gN/m^2 F
+C_ALLOMETRY - C allocation index none F
+DAYL - daylength s F
+DAYS_ACTIVE - number of days since last dormancy days F
+DEADCROOTC - dead coarse root C gC/m^2 T
+DEADCROOTC_STORAGE - dead coarse root C storage gC/m^2 F
+DEADCROOTC_STORAGE_TO_XFER - dead coarse root C shift storage to transfer gC/m^2/s F
+DEADCROOTC_XFER - dead coarse root C transfer gC/m^2 F
+DEADCROOTC_XFER_TO_DEADCROOTC - dead coarse root C growth from storage gC/m^2/s F
+DEADCROOTN - dead coarse root N gN/m^2 T
+DEADCROOTN_STORAGE - dead coarse root N storage gN/m^2 F
+DEADCROOTN_STORAGE_TO_XFER - dead coarse root N shift storage to transfer gN/m^2/s F
+DEADCROOTN_XFER - dead coarse root N transfer gN/m^2 F
+DEADCROOTN_XFER_TO_DEADCROOTN - dead coarse root N growth from storage gN/m^2/s F
+DEADSTEMC - dead stem C gC/m^2 T
+DEADSTEMC_STORAGE - dead stem C storage gC/m^2 F
+DEADSTEMC_STORAGE_TO_XFER - dead stem C shift storage to transfer gC/m^2/s F
+DEADSTEMC_XFER - dead stem C transfer gC/m^2 F
+DEADSTEMC_XFER_TO_DEADSTEMC - dead stem C growth from storage gC/m^2/s F
+DEADSTEMN - dead stem N gN/m^2 T
+DEADSTEMN_STORAGE - dead stem N storage gN/m^2 F
+DEADSTEMN_STORAGE_TO_XFER - dead stem N shift storage to transfer gN/m^2/s F
+DEADSTEMN_XFER - dead stem N transfer gN/m^2 F
+DEADSTEMN_XFER_TO_DEADSTEMN - dead stem N growth from storage gN/m^2/s F
+DENIT - total rate of denitrification gN/m^2/s T
+DGNETDT - derivative of net ground heat flux wrt soil temp W/m^2/K F
+DISPLA - displacement height (vegetated landunits only) m F
+DISPVEGC - displayed veg carbon, excluding storage and cpool gC/m^2 T
+DISPVEGN - displayed vegetation nitrogen gN/m^2 T
+DLRAD - downward longwave radiation below the canopy W/m^2 F
+DORMANT_FLAG - dormancy flag none F
+DOWNREG - fractional reduction in GPP due to N limitation proportion F
+DPVLTRB1 - turbulent deposition velocity 1 m/s F
+DPVLTRB2 - turbulent deposition velocity 2 m/s F
+DPVLTRB3 - turbulent deposition velocity 3 m/s F
+DPVLTRB4 - turbulent deposition velocity 4 m/s F
+DSL - dry surface layer thickness mm T
+DSTDEP - total dust deposition (dry+wet) from atmosphere kg/m^2/s T
+DSTFLXT - total surface dust emission kg/m2/s T
+DT_VEG - change in t_veg, last iteration K F
+DWT_CONV_CFLUX - conversion C flux (immediate loss to atm) (0 at all times except first timestep of year) gC/m^2/s T
+DWT_CONV_CFLUX_DRIBBLED - conversion C flux (immediate loss to atm), dribbled throughout the year gC/m^2/s T
+DWT_CONV_CFLUX_PATCH - patch-level conversion C flux (immediate loss to atm) (0 at all times except first timestep of gC/m^2/s F
+DWT_CONV_NFLUX - conversion N flux (immediate loss to atm) (0 at all times except first timestep of year) gN/m^2/s T
+DWT_CONV_NFLUX_PATCH - patch-level conversion N flux (immediate loss to atm) (0 at all times except first timestep of gN/m^2/s F
+DWT_CROPPROD1C_GAIN - landcover change-driven addition to 1-year crop product pool gC/m^2/s T
+DWT_CROPPROD1N_GAIN - landcover change-driven addition to 1-year crop product pool gN/m^2/s T
+DWT_PROD100C_GAIN - landcover change-driven addition to 100-yr wood product pool gC/m^2/s F
+DWT_PROD100N_GAIN - landcover change-driven addition to 100-yr wood product pool gN/m^2/s F
+DWT_PROD10C_GAIN - landcover change-driven addition to 10-yr wood product pool gC/m^2/s F
+DWT_PROD10N_GAIN - landcover change-driven addition to 10-yr wood product pool gN/m^2/s F
+DWT_SEEDC_TO_DEADSTEM - seed source to patch-level deadstem gC/m^2/s F
+DWT_SEEDC_TO_DEADSTEM_PATCH - patch-level seed source to patch-level deadstem (per-area-gridcell; only makes sense with dov2 gC/m^2/s F
+DWT_SEEDC_TO_LEAF - seed source to patch-level leaf gC/m^2/s F
+DWT_SEEDC_TO_LEAF_PATCH - patch-level seed source to patch-level leaf (per-area-gridcell; only makes sense with dov2xy=. gC/m^2/s F
+DWT_SEEDN_TO_DEADSTEM - seed source to patch-level deadstem gN/m^2/s T
+DWT_SEEDN_TO_DEADSTEM_PATCH - patch-level seed source to patch-level deadstem (per-area-gridcell; only makes sense with dov2 gN/m^2/s F
+DWT_SEEDN_TO_LEAF - seed source to patch-level leaf gN/m^2/s T
+DWT_SEEDN_TO_LEAF_PATCH - patch-level seed source to patch-level leaf (per-area-gridcell; only makes sense with dov2xy=. gN/m^2/s F
+DWT_SLASH_CFLUX - slash C flux (to litter diagnostic only) (0 at all times except first timestep of year) gC/m^2/s T
+DWT_SLASH_CFLUX_PATCH - patch-level slash C flux (to litter diagnostic only) (0 at all times except first timestep of gC/m^2/s F
+DWT_WOODPRODC_GAIN - landcover change-driven addition to wood product pools gC/m^2/s T
+DWT_WOODPRODN_GAIN - landcover change-driven addition to wood product pools gN/m^2/s T
+DWT_WOOD_PRODUCTC_GAIN_PATCH - patch-level landcover change-driven addition to wood product pools(0 at all times except first gC/m^2/s F
+DYN_COL_ADJUSTMENTS_CH4 - Adjustments in ch4 due to dynamic column areas; only makes sense at the column level: should n gC/m^2 F
+DYN_COL_SOIL_ADJUSTMENTS_C - Adjustments in soil carbon due to dynamic column areas; only makes sense at the column level: gC/m^2 F
+DYN_COL_SOIL_ADJUSTMENTS_N - Adjustments in soil nitrogen due to dynamic column areas; only makes sense at the column level gN/m^2 F
+DYN_COL_SOIL_ADJUSTMENTS_NH4 - Adjustments in soil NH4 due to dynamic column areas; only makes sense at the column level: sho gN/m^2 F
+DYN_COL_SOIL_ADJUSTMENTS_NO3 - Adjustments in soil NO3 due to dynamic column areas; only makes sense at the column level: sho gN/m^2 F
+EFLXBUILD - building heat flux from change in interior building air temperature W/m^2 T
+EFLX_DYNBAL - dynamic land cover change conversion energy flux W/m^2 T
+EFLX_GNET - net heat flux into ground W/m^2 F
+EFLX_GRND_LAKE - net heat flux into lake/snow surface, excluding light transmission W/m^2 T
+EFLX_LH_TOT - total latent heat flux [+ to atm] W/m^2 T
+EFLX_LH_TOT_ICE - total latent heat flux [+ to atm] (ice landunits only) W/m^2 F
+EFLX_LH_TOT_R - Rural total evaporation W/m^2 T
+EFLX_LH_TOT_U - Urban total evaporation W/m^2 F
+EFLX_SOIL_GRND - soil heat flux [+ into soil] W/m^2 F
+ELAI - exposed one-sided leaf area index m^2/m^2 T
+EMG - ground emissivity proportion F
+EMV - vegetation emissivity proportion F
+EOPT - Eopt coefficient for VOC calc non F
+ER - total ecosystem respiration, autotrophic + heterotrophic gC/m^2/s T
+ERRH2O - total water conservation error mm T
+ERRH2OSNO - imbalance in snow depth (liquid water) mm T
+ERRSEB - surface energy conservation error W/m^2 T
+ERRSOI - soil/lake energy conservation error W/m^2 T
+ERRSOL - solar radiation conservation error W/m^2 T
+ESAI - exposed one-sided stem area index m^2/m^2 T
+EXCESSC_MR - excess C maintenance respiration gC/m^2/s F
+EXCESS_CFLUX - C flux not allocated due to downregulation gC/m^2/s F
+FAREA_BURNED - timestep fractional area burned s-1 T
+FCANSNO - fraction of canopy that is wet proportion F
+FCEV - canopy evaporation W/m^2 T
+FCH4 - Gridcell surface CH4 flux to atmosphere (+ to atm) kgC/m2/s T
+FCH4TOCO2 - Gridcell oxidation of CH4 to CO2 gC/m2/s T
+FCH4_DFSAT - CH4 additional flux due to changing fsat, natural vegetated and crop landunits only kgC/m2/s T
+FCO2 - CO2 flux to atmosphere (+ to atm) kgCO2/m2/s F
+FCOV - fractional impermeable area unitless T
+FCTR - canopy transpiration W/m^2 T
+FDRY - fraction of foliage that is green and dry proportion F
+FERTNITRO - Nitrogen fertilizer for each crop gN/m2/yr F
+FERT_COUNTER - time left to fertilize seconds F
+FERT_TO_SMINN - fertilizer to soil mineral N gN/m^2/s F
+FFIX_TO_SMINN - free living N fixation to soil mineral N gN/m^2/s T
+FGEV - ground evaporation W/m^2 T
+FGR - heat flux into soil/snow including snow melt and lake / snow light transmission W/m^2 T
+FGR12 - heat flux between soil layers 1 and 2 W/m^2 T
+FGR_ICE - heat flux into soil/snow including snow melt and lake / snow light transmission (ice landunits W/m^2 F
+FGR_R - Rural heat flux into soil/snow including snow melt and snow light transmission W/m^2 F
+FGR_U - Urban heat flux into soil/snow including snow melt W/m^2 F
+FH2OSFC - fraction of ground covered by surface water unitless T
+FH2OSFC_NOSNOW - fraction of ground covered by surface water (if no snow present) unitless F
+FINUNDATED - fractional inundated area of vegetated columns unitless T
+FINUNDATED_LAG - time-lagged inundated fraction of vegetated columns unitless F
+FIRA - net infrared (longwave) radiation W/m^2 T
+FIRA_ICE - net infrared (longwave) radiation (ice landunits only) W/m^2 F
+FIRA_R - Rural net infrared (longwave) radiation W/m^2 T
+FIRA_U - Urban net infrared (longwave) radiation W/m^2 F
+FIRE - emitted infrared (longwave) radiation W/m^2 T
+FIRE_ICE - emitted infrared (longwave) radiation (ice landunits only) W/m^2 F
+FIRE_R - Rural emitted infrared (longwave) radiation W/m^2 T
+FIRE_U - Urban emitted infrared (longwave) radiation W/m^2 F
+FLDS - atmospheric longwave radiation (downscaled to columns in glacier regions) W/m^2 T
+FLDS_ICE - atmospheric longwave radiation (downscaled to columns in glacier regions) (ice landunits only) W/m^2 F
+FPI - fraction of potential immobilization proportion T
+FPSN - photosynthesis umol m-2 s-1 T
+FPSN24 - 24 hour accumulative patch photosynthesis starting from mid-night umol CO2/m^2 ground/day F
+FPSN_WC - Rubisco-limited photosynthesis umol m-2 s-1 F
+FPSN_WJ - RuBP-limited photosynthesis umol m-2 s-1 F
+FPSN_WP - Product-limited photosynthesis umol m-2 s-1 F
+FREE_RETRANSN_TO_NPOOL - deployment of retranslocated N gN/m^2/s T
+FROOTC - fine root C gC/m^2 T
+FROOTC_ALLOC - fine root C allocation gC/m^2/s T
+FROOTC_LOSS - fine root C loss gC/m^2/s T
+FROOTC_STORAGE - fine root C storage gC/m^2 F
+FROOTC_STORAGE_TO_XFER - fine root C shift storage to transfer gC/m^2/s F
+FROOTC_TO_LITTER - fine root C litterfall gC/m^2/s F
+FROOTC_XFER - fine root C transfer gC/m^2 F
+FROOTC_XFER_TO_FROOTC - fine root C growth from storage gC/m^2/s F
+FROOTN - fine root N gN/m^2 T
+FROOTN_STORAGE - fine root N storage gN/m^2 F
+FROOTN_STORAGE_TO_XFER - fine root N shift storage to transfer gN/m^2/s F
+FROOTN_TO_LITTER - fine root N litterfall gN/m^2/s F
+FROOTN_XFER - fine root N transfer gN/m^2 F
+FROOTN_XFER_TO_FROOTN - fine root N growth from storage gN/m^2/s F
+FROOT_MR - fine root maintenance respiration gC/m^2/s F
+FROST_TABLE - frost table depth (natural vegetated and crop landunits only) m F
+FSA - absorbed solar radiation W/m^2 T
+FSAT - fractional area with water table at surface unitless T
+FSA_ICE - absorbed solar radiation (ice landunits only) W/m^2 F
+FSA_R - Rural absorbed solar radiation W/m^2 F
+FSA_U - Urban absorbed solar radiation W/m^2 F
+FSD24 - direct radiation (last 24hrs) K F
+FSD240 - direct radiation (last 240hrs) K F
+FSDS - atmospheric incident solar radiation W/m^2 T
+FSDSND - direct nir incident solar radiation W/m^2 T
+FSDSNDLN - direct nir incident solar radiation at local noon W/m^2 T
+FSDSNI - diffuse nir incident solar radiation W/m^2 T
+FSDSVD - direct vis incident solar radiation W/m^2 T
+FSDSVDLN - direct vis incident solar radiation at local noon W/m^2 T
+FSDSVI - diffuse vis incident solar radiation W/m^2 T
+FSDSVILN - diffuse vis incident solar radiation at local noon W/m^2 T
+FSH - sensible heat not including correction for land use change and rain/snow conversion W/m^2 T
+FSH_G - sensible heat from ground W/m^2 T
+FSH_ICE - sensible heat not including correction for land use change and rain/snow conversion (ice landu W/m^2 F
+FSH_PRECIP_CONVERSION - Sensible heat flux from conversion of rain/snow atm forcing W/m^2 T
+FSH_R - Rural sensible heat W/m^2 T
+FSH_RUNOFF_ICE_TO_LIQ - sensible heat flux generated from conversion of ice runoff to liquid W/m^2 T
+FSH_TO_COUPLER - sensible heat sent to coupler (includes corrections for land use change, rain/snow conversion W/m^2 T
+FSH_U - Urban sensible heat W/m^2 F
+FSH_V - sensible heat from veg W/m^2 T
+FSI24 - indirect radiation (last 24hrs) K F
+FSI240 - indirect radiation (last 240hrs) K F
+FSM - snow melt heat flux W/m^2 T
+FSM_ICE - snow melt heat flux (ice landunits only) W/m^2 F
+FSM_R - Rural snow melt heat flux W/m^2 F
+FSM_U - Urban snow melt heat flux W/m^2 F
+FSNO - fraction of ground covered by snow unitless T
+FSNO_EFF - effective fraction of ground covered by snow unitless T
+FSNO_ICE - fraction of ground covered by snow (ice landunits only) unitless F
+FSR - reflected solar radiation W/m^2 T
+FSRND - direct nir reflected solar radiation W/m^2 T
+FSRNDLN - direct nir reflected solar radiation at local noon W/m^2 T
+FSRNI - diffuse nir reflected solar radiation W/m^2 T
+FSRVD - direct vis reflected solar radiation W/m^2 T
+FSRVDLN - direct vis reflected solar radiation at local noon W/m^2 T
+FSRVI - diffuse vis reflected solar radiation W/m^2 T
+FSR_ICE - reflected solar radiation (ice landunits only) W/m^2 F
+FSUN - sunlit fraction of canopy proportion F
+FSUN24 - fraction sunlit (last 24hrs) K F
+FSUN240 - fraction sunlit (last 240hrs) K F
+FUELC - fuel load gC/m^2 T
+FV - friction velocity m/s T
+FWET - fraction of canopy that is wet proportion F
+F_DENIT - denitrification flux gN/m^2/s T
+F_N2O_DENIT - denitrification N2O flux gN/m^2/s T
+F_N2O_NIT - nitrification N2O flux gN/m^2/s T
+F_NIT - nitrification flux gN/m^2/s T
+GAMMA - total gamma for VOC calc non F
+GAMMAA - gamma A for VOC calc non F
+GAMMAC - gamma C for VOC calc non F
+GAMMAL - gamma L for VOC calc non F
+GAMMAP - gamma P for VOC calc non F
+GAMMAS - gamma S for VOC calc non F
+GAMMAT - gamma T for VOC calc non F
+GDD0 - Growing degree days base 0C from planting ddays F
+GDD020 - Twenty year average of growing degree days base 0C from planting ddays F
+GDD10 - Growing degree days base 10C from planting ddays F
+GDD1020 - Twenty year average of growing degree days base 10C from planting ddays F
+GDD8 - Growing degree days base 8C from planting ddays F
+GDD820 - Twenty year average of growing degree days base 8C from planting ddays F
+GDDACCUM - Accumulated growing degree days past planting date for crop ddays F
+GDDHARV - Growing degree days (gdd) needed to harvest ddays F
+GDDTSOI - Growing degree-days from planting (top two soil layers) ddays F
+GPP - gross primary production gC/m^2/s T
+GR - total growth respiration gC/m^2/s T
+GRAINC - grain C (does not equal yield) gC/m^2 T
+GRAINC_TO_FOOD - grain C to food gC/m^2/s T
+GRAINC_TO_FOOD_ANN - grain C to food harvested per calendar year; should only be output annually gC/m^2 F
+GRAINC_TO_SEED - grain C to seed gC/m^2/s T
+GRAINN - grain N gN/m^2 T
+GRESP_STORAGE - growth respiration storage gC/m^2 F
+GRESP_STORAGE_TO_XFER - growth respiration shift storage to transfer gC/m^2/s F
+GRESP_XFER - growth respiration transfer gC/m^2 F
+GROSS_NMIN - gross rate of N mineralization gN/m^2/s T
+GRU_PROD100C_GAIN - gross unrepresented landcover change addition to 100-yr wood product pool gC/m^2/s F
+GRU_PROD100N_GAIN - gross unrepresented landcover change addition to 100-yr wood product pool gN/m^2/s F
+GRU_PROD10C_GAIN - gross unrepresented landcover change addition to 10-yr wood product pool gC/m^2/s F
+GRU_PROD10N_GAIN - gross unrepresented landcover change addition to 10-yr wood product pool gN/m^2/s F
+GSSHA - shaded leaf stomatal conductance umol H20/m2/s T
+GSSHALN - shaded leaf stomatal conductance at local noon umol H20/m2/s T
+GSSUN - sunlit leaf stomatal conductance umol H20/m2/s T
+GSSUNLN - sunlit leaf stomatal conductance at local noon umol H20/m2/s T
+H2OCAN - intercepted water mm T
+H2OSFC - surface water depth mm T
+H2OSNO - snow depth (liquid water) mm T
+H2OSNO_ICE - snow depth (liquid water, ice landunits only) mm F
+H2OSNO_TOP - mass of snow in top snow layer kg/m2 T
+HBOT - canopy bottom m F
+HEAT_CONTENT1 - initial gridcell total heat content J/m^2 T
+HEAT_CONTENT1_VEG - initial gridcell total heat content - natural vegetated and crop landunits only J/m^2 F
+HEAT_CONTENT2 - post land cover change total heat content J/m^2 F
+HEAT_FROM_AC - sensible heat flux put into canyon due to heat removed from air conditioning W/m^2 T
+HIA - 2 m NWS Heat Index C T
+HIA_R - Rural 2 m NWS Heat Index C T
+HIA_U - Urban 2 m NWS Heat Index C T
+HR - total heterotrophic respiration gC/m^2/s T
+HTOP - canopy top m T
+HUI - Crop patch heat unit index ddays F
+HUMIDEX - 2 m Humidex C T
+HUMIDEX_R - Rural 2 m Humidex C T
+HUMIDEX_U - Urban 2 m Humidex C T
+ICE_CONTENT1 - initial gridcell total ice content mm T
+ICE_CONTENT2 - post land cover change total ice content mm F
+ICE_MODEL_FRACTION - Ice sheet model fractional coverage unitless F
+INIT_GPP - GPP flux before downregulation gC/m^2/s F
+INT_SNOW - accumulated swe (natural vegetated and crop landunits only) mm F
+INT_SNOW_ICE - accumulated swe (ice landunits only) mm F
+IWUELN - local noon intrinsic water use efficiency umolCO2/molH2O T
+JMX25T - canopy profile of jmax umol/m2/s T
+Jmx25Z - maximum rate of electron transport at 25 Celcius for canopy layers umol electrons/m2/s T
+LAI240 - 240hr average of leaf area index m^2/m^2 F
+LAISHA - shaded projected leaf area index m^2/m^2 T
+LAISUN - sunlit projected leaf area index m^2/m^2 T
+LAKEICEFRAC_SURF - surface lake layer ice mass fraction unitless T
+LAKEICETHICK - thickness of lake ice (including physical expansion on freezing) m T
+LAND_USE_FLUX - total C emitted from land cover conversion (smoothed over the year) and wood and grain product gC/m^2/s T
+LATBASET - latitude vary base temperature for hui degree C F
+LEAFC - leaf C gC/m^2 T
+LEAFCN - Leaf CN ratio used for flexible CN gC/gN T
+LEAFCN_OFFSET - Leaf C:N used by FUN unitless F
+LEAFCN_STORAGE - Storage Leaf CN ratio used for flexible CN gC/gN F
+LEAFC_ALLOC - leaf C allocation gC/m^2/s T
+LEAFC_CHANGE - C change in leaf gC/m^2/s T
+LEAFC_LOSS - leaf C loss gC/m^2/s T
+LEAFC_STORAGE - leaf C storage gC/m^2 F
+LEAFC_STORAGE_TO_XFER - leaf C shift storage to transfer gC/m^2/s F
+LEAFC_STORAGE_XFER_ACC - Accumulated leaf C transfer gC/m^2 F
+LEAFC_TO_BIOFUELC - leaf C to biofuel C gC/m^2/s T
+LEAFC_TO_LITTER - leaf C litterfall gC/m^2/s F
+LEAFC_TO_LITTER_FUN - leaf C litterfall used by FUN gC/m^2/s T
+LEAFC_XFER - leaf C transfer gC/m^2 F
+LEAFC_XFER_TO_LEAFC - leaf C growth from storage gC/m^2/s F
+LEAFN - leaf N gN/m^2 T
+LEAFN_STORAGE - leaf N storage gN/m^2 F
+LEAFN_STORAGE_TO_XFER - leaf N shift storage to transfer gN/m^2/s F
+LEAFN_STORAGE_XFER_ACC - Accmulated leaf N transfer gN/m^2 F
+LEAFN_TO_LITTER - leaf N litterfall gN/m^2/s T
+LEAFN_TO_RETRANSN - leaf N to retranslocated N pool gN/m^2/s F
+LEAFN_XFER - leaf N transfer gN/m^2 F
+LEAFN_XFER_TO_LEAFN - leaf N growth from storage gN/m^2/s F
+LEAF_MR - leaf maintenance respiration gC/m^2/s T
+LFC2 - conversion area fraction of BET and BDT that burned per sec T
+LGSF - long growing season factor proportion F
+LIQCAN - intercepted liquid water mm T
+LIQUID_CONTENT1 - initial gridcell total liq content mm T
+LIQUID_CONTENT2 - post landuse change gridcell total liq content mm F
+LIQUID_WATER_TEMP1 - initial gridcell weighted average liquid water temperature K F
+LITFALL - litterfall (leaves and fine roots) gC/m^2/s T
+LITFIRE - litter fire losses gC/m^2/s F
+LITTERC_HR - litter C heterotrophic respiration gC/m^2/s T
+LITTERC_LOSS - litter C loss gC/m^2/s T
+LIT_CEL_C - LIT_CEL C gC/m^2 T
+LIT_CEL_C_1m - LIT_CEL C to 1 meter gC/m^2 F
+LIT_CEL_C_TO_SOM_ACT_C - decomp. of cellulosic litter C to active soil organic C gC/m^2/s F
+LIT_CEL_HR - Het. Resp. from cellulosic litter gC/m^2/s F
+LIT_CEL_N - LIT_CEL N gN/m^2 T
+LIT_CEL_N_1m - LIT_CEL N to 1 meter gN/m^2 F
+LIT_CEL_N_TO_SOM_ACT_N - decomp. of cellulosic litter N to active soil organic N gN/m^2 F
+LIT_LIG_C - LIT_LIG C gC/m^2 T
+LIT_LIG_C_1m - LIT_LIG C to 1 meter gC/m^2 F
+LIT_LIG_C_TO_SOM_SLO_C - decomp. of lignin litter C to slow soil organic ma C gC/m^2/s F
+LIT_LIG_HR - Het. Resp. from lignin litter gC/m^2/s F
+LIT_LIG_N - LIT_LIG N gN/m^2 T
+LIT_LIG_N_1m - LIT_LIG N to 1 meter gN/m^2 F
+LIT_LIG_N_TO_SOM_SLO_N - decomp. of lignin litter N to slow soil organic ma N gN/m^2 F
+LIT_MET_C - LIT_MET C gC/m^2 T
+LIT_MET_C_1m - LIT_MET C to 1 meter gC/m^2 F
+LIT_MET_C_TO_SOM_ACT_C - decomp. of metabolic litter C to active soil organic C gC/m^2/s F
+LIT_MET_HR - Het. Resp. from metabolic litter gC/m^2/s F
+LIT_MET_N - LIT_MET N gN/m^2 T
+LIT_MET_N_1m - LIT_MET N to 1 meter gN/m^2 F
+LIT_MET_N_TO_SOM_ACT_N - decomp. of metabolic litter N to active soil organic N gN/m^2 F
+LIVECROOTC - live coarse root C gC/m^2 T
+LIVECROOTC_STORAGE - live coarse root C storage gC/m^2 F
+LIVECROOTC_STORAGE_TO_XFER - live coarse root C shift storage to transfer gC/m^2/s F
+LIVECROOTC_TO_DEADCROOTC - live coarse root C turnover gC/m^2/s F
+LIVECROOTC_XFER - live coarse root C transfer gC/m^2 F
+LIVECROOTC_XFER_TO_LIVECROOTC - live coarse root C growth from storage gC/m^2/s F
+LIVECROOTN - live coarse root N gN/m^2 T
+LIVECROOTN_STORAGE - live coarse root N storage gN/m^2 F
+LIVECROOTN_STORAGE_TO_XFER - live coarse root N shift storage to transfer gN/m^2/s F
+LIVECROOTN_TO_DEADCROOTN - live coarse root N turnover gN/m^2/s F
+LIVECROOTN_TO_RETRANSN - live coarse root N to retranslocated N pool gN/m^2/s F
+LIVECROOTN_XFER - live coarse root N transfer gN/m^2 F
+LIVECROOTN_XFER_TO_LIVECROOTN - live coarse root N growth from storage gN/m^2/s F
+LIVECROOT_MR - live coarse root maintenance respiration gC/m^2/s F
+LIVESTEMC - live stem C gC/m^2 T
+LIVESTEMC_STORAGE - live stem C storage gC/m^2 F
+LIVESTEMC_STORAGE_TO_XFER - live stem C shift storage to transfer gC/m^2/s F
+LIVESTEMC_TO_BIOFUELC - livestem C to biofuel C gC/m^2/s T
+LIVESTEMC_TO_DEADSTEMC - live stem C turnover gC/m^2/s F
+LIVESTEMC_XFER - live stem C transfer gC/m^2 F
+LIVESTEMC_XFER_TO_LIVESTEMC - live stem C growth from storage gC/m^2/s F
+LIVESTEMN - live stem N gN/m^2 T
+LIVESTEMN_STORAGE - live stem N storage gN/m^2 F
+LIVESTEMN_STORAGE_TO_XFER - live stem N shift storage to transfer gN/m^2/s F
+LIVESTEMN_TO_DEADSTEMN - live stem N turnover gN/m^2/s F
+LIVESTEMN_TO_RETRANSN - live stem N to retranslocated N pool gN/m^2/s F
+LIVESTEMN_XFER - live stem N transfer gN/m^2 F
+LIVESTEMN_XFER_TO_LIVESTEMN - live stem N growth from storage gN/m^2/s F
+LIVESTEM_MR - live stem maintenance respiration gC/m^2/s F
+LNC - leaf N concentration gN leaf/m^2 T
+LWdown - atmospheric longwave radiation (downscaled to columns in glacier regions) W/m^2 F
+LWup - upwelling longwave radiation W/m^2 F
+MEG_acetaldehyde - MEGAN flux kg/m2/sec T
+MEG_acetic_acid - MEGAN flux kg/m2/sec T
+MEG_acetone - MEGAN flux kg/m2/sec T
+MEG_carene_3 - MEGAN flux kg/m2/sec T
+MEG_ethanol - MEGAN flux kg/m2/sec T
+MEG_formaldehyde - MEGAN flux kg/m2/sec T
+MEG_isoprene - MEGAN flux kg/m2/sec T
+MEG_methanol - MEGAN flux kg/m2/sec T
+MEG_pinene_a - MEGAN flux kg/m2/sec T
+MEG_thujene_a - MEGAN flux kg/m2/sec T
+MR - maintenance respiration gC/m^2/s T
+M_CWD_C_TO_FIRE - coarse woody debris C fire loss gC/m^2/s F
+M_CWD_N_TO_FIRE - coarse woody debris N fire loss gN/m^2 F
+M_DEADCROOTC_STORAGE_TO_LITTER - dead coarse root C storage mortality gC/m^2/s F
+M_DEADCROOTC_STORAGE_TO_LITTER_FIRE - dead coarse root C storage fire mortality to litter gC/m^2/s F
+M_DEADCROOTC_TO_LITTER - dead coarse root C mortality gC/m^2/s F
+M_DEADCROOTC_XFER_TO_LITTER - dead coarse root C transfer mortality gC/m^2/s F
+M_DEADCROOTN_STORAGE_TO_FIRE - dead coarse root N storage fire loss gN/m^2/s F
+M_DEADCROOTN_STORAGE_TO_LITTER - dead coarse root N storage mortality gN/m^2/s F
+M_DEADCROOTN_TO_FIRE - dead coarse root N fire loss gN/m^2/s F
+M_DEADCROOTN_TO_LITTER - dead coarse root N mortality gN/m^2/s F
+M_DEADCROOTN_TO_LITTER_FIRE - dead coarse root N fire mortality to litter gN/m^2/s F
+M_DEADCROOTN_XFER_TO_FIRE - dead coarse root N transfer fire loss gN/m^2/s F
+M_DEADCROOTN_XFER_TO_LITTER - dead coarse root N transfer mortality gN/m^2/s F
+M_DEADROOTC_STORAGE_TO_FIRE - dead root C storage fire loss gC/m^2/s F
+M_DEADROOTC_STORAGE_TO_LITTER_FIRE - dead root C storage fire mortality to litter gC/m^2/s F
+M_DEADROOTC_TO_FIRE - dead root C fire loss gC/m^2/s F
+M_DEADROOTC_TO_LITTER_FIRE - dead root C fire mortality to litter gC/m^2/s F
+M_DEADROOTC_XFER_TO_FIRE - dead root C transfer fire loss gC/m^2/s F
+M_DEADROOTC_XFER_TO_LITTER_FIRE - dead root C transfer fire mortality to litter gC/m^2/s F
+M_DEADSTEMC_STORAGE_TO_FIRE - dead stem C storage fire loss gC/m^2/s F
+M_DEADSTEMC_STORAGE_TO_LITTER - dead stem C storage mortality gC/m^2/s F
+M_DEADSTEMC_STORAGE_TO_LITTER_FIRE - dead stem C storage fire mortality to litter gC/m^2/s F
+M_DEADSTEMC_TO_FIRE - dead stem C fire loss gC/m^2/s F
+M_DEADSTEMC_TO_LITTER - dead stem C mortality gC/m^2/s F
+M_DEADSTEMC_TO_LITTER_FIRE - dead stem C fire mortality to litter gC/m^2/s F
+M_DEADSTEMC_XFER_TO_FIRE - dead stem C transfer fire loss gC/m^2/s F
+M_DEADSTEMC_XFER_TO_LITTER - dead stem C transfer mortality gC/m^2/s F
+M_DEADSTEMC_XFER_TO_LITTER_FIRE - dead stem C transfer fire mortality to litter gC/m^2/s F
+M_DEADSTEMN_STORAGE_TO_FIRE - dead stem N storage fire loss gN/m^2/s F
+M_DEADSTEMN_STORAGE_TO_LITTER - dead stem N storage mortality gN/m^2/s F
+M_DEADSTEMN_TO_FIRE - dead stem N fire loss gN/m^2/s F
+M_DEADSTEMN_TO_LITTER - dead stem N mortality gN/m^2/s F
+M_DEADSTEMN_TO_LITTER_FIRE - dead stem N fire mortality to litter gN/m^2/s F
+M_DEADSTEMN_XFER_TO_FIRE - dead stem N transfer fire loss gN/m^2/s F
+M_DEADSTEMN_XFER_TO_LITTER - dead stem N transfer mortality gN/m^2/s F
+M_FROOTC_STORAGE_TO_FIRE - fine root C storage fire loss gC/m^2/s F
+M_FROOTC_STORAGE_TO_LITTER - fine root C storage mortality gC/m^2/s F
+M_FROOTC_STORAGE_TO_LITTER_FIRE - fine root C storage fire mortality to litter gC/m^2/s F
+M_FROOTC_TO_FIRE - fine root C fire loss gC/m^2/s F
+M_FROOTC_TO_LITTER - fine root C mortality gC/m^2/s F
+M_FROOTC_TO_LITTER_FIRE - fine root C fire mortality to litter gC/m^2/s F
+M_FROOTC_XFER_TO_FIRE - fine root C transfer fire loss gC/m^2/s F
+M_FROOTC_XFER_TO_LITTER - fine root C transfer mortality gC/m^2/s F
+M_FROOTC_XFER_TO_LITTER_FIRE - fine root C transfer fire mortality to litter gC/m^2/s F
+M_FROOTN_STORAGE_TO_FIRE - fine root N storage fire loss gN/m^2/s F
+M_FROOTN_STORAGE_TO_LITTER - fine root N storage mortality gN/m^2/s F
+M_FROOTN_TO_FIRE - fine root N fire loss gN/m^2/s F
+M_FROOTN_TO_LITTER - fine root N mortality gN/m^2/s F
+M_FROOTN_XFER_TO_FIRE - fine root N transfer fire loss gN/m^2/s F
+M_FROOTN_XFER_TO_LITTER - fine root N transfer mortality gN/m^2/s F
+M_GRESP_STORAGE_TO_FIRE - growth respiration storage fire loss gC/m^2/s F
+M_GRESP_STORAGE_TO_LITTER - growth respiration storage mortality gC/m^2/s F
+M_GRESP_STORAGE_TO_LITTER_FIRE - growth respiration storage fire mortality to litter gC/m^2/s F
+M_GRESP_XFER_TO_FIRE - growth respiration transfer fire loss gC/m^2/s F
+M_GRESP_XFER_TO_LITTER - growth respiration transfer mortality gC/m^2/s F
+M_GRESP_XFER_TO_LITTER_FIRE - growth respiration transfer fire mortality to litter gC/m^2/s F
+M_LEAFC_STORAGE_TO_FIRE - leaf C storage fire loss gC/m^2/s F
+M_LEAFC_STORAGE_TO_LITTER - leaf C storage mortality gC/m^2/s F
+M_LEAFC_STORAGE_TO_LITTER_FIRE - leaf C fire mortality to litter gC/m^2/s F
+M_LEAFC_TO_FIRE - leaf C fire loss gC/m^2/s F
+M_LEAFC_TO_LITTER - leaf C mortality gC/m^2/s F
+M_LEAFC_TO_LITTER_FIRE - leaf C fire mortality to litter gC/m^2/s F
+M_LEAFC_XFER_TO_FIRE - leaf C transfer fire loss gC/m^2/s F
+M_LEAFC_XFER_TO_LITTER - leaf C transfer mortality gC/m^2/s F
+M_LEAFC_XFER_TO_LITTER_FIRE - leaf C transfer fire mortality to litter gC/m^2/s F
+M_LEAFN_STORAGE_TO_FIRE - leaf N storage fire loss gN/m^2/s F
+M_LEAFN_STORAGE_TO_LITTER - leaf N storage mortality gN/m^2/s F
+M_LEAFN_TO_FIRE - leaf N fire loss gN/m^2/s F
+M_LEAFN_TO_LITTER - leaf N mortality gN/m^2/s F
+M_LEAFN_XFER_TO_FIRE - leaf N transfer fire loss gN/m^2/s F
+M_LEAFN_XFER_TO_LITTER - leaf N transfer mortality gN/m^2/s F
+M_LIT_CEL_C_TO_FIRE - cellulosic litter C fire loss gC/m^2/s F
+M_LIT_CEL_C_TO_LEACHING - cellulosic litter C leaching loss gC/m^2/s F
+M_LIT_CEL_N_TO_FIRE - cellulosic litter N fire loss gN/m^2 F
+M_LIT_CEL_N_TO_LEACHING - cellulosic litter N leaching loss gN/m^2/s F
+M_LIT_LIG_C_TO_FIRE - lignin litter C fire loss gC/m^2/s F
+M_LIT_LIG_C_TO_LEACHING - lignin litter C leaching loss gC/m^2/s F
+M_LIT_LIG_N_TO_FIRE - lignin litter N fire loss gN/m^2 F
+M_LIT_LIG_N_TO_LEACHING - lignin litter N leaching loss gN/m^2/s F
+M_LIT_MET_C_TO_FIRE - metabolic litter C fire loss gC/m^2/s F
+M_LIT_MET_C_TO_LEACHING - metabolic litter C leaching loss gC/m^2/s F
+M_LIT_MET_N_TO_FIRE - metabolic litter N fire loss gN/m^2 F
+M_LIT_MET_N_TO_LEACHING - metabolic litter N leaching loss gN/m^2/s F
+M_LIVECROOTC_STORAGE_TO_LITTER - live coarse root C storage mortality gC/m^2/s F
+M_LIVECROOTC_STORAGE_TO_LITTER_FIRE - live coarse root C fire mortality to litter gC/m^2/s F
+M_LIVECROOTC_TO_LITTER - live coarse root C mortality gC/m^2/s F
+M_LIVECROOTC_XFER_TO_LITTER - live coarse root C transfer mortality gC/m^2/s F
+M_LIVECROOTN_STORAGE_TO_FIRE - live coarse root N storage fire loss gN/m^2/s F
+M_LIVECROOTN_STORAGE_TO_LITTER - live coarse root N storage mortality gN/m^2/s F
+M_LIVECROOTN_TO_FIRE - live coarse root N fire loss gN/m^2/s F
+M_LIVECROOTN_TO_LITTER - live coarse root N mortality gN/m^2/s F
+M_LIVECROOTN_XFER_TO_FIRE - live coarse root N transfer fire loss gN/m^2/s F
+M_LIVECROOTN_XFER_TO_LITTER - live coarse root N transfer mortality gN/m^2/s F
+M_LIVEROOTC_STORAGE_TO_FIRE - live root C storage fire loss gC/m^2/s F
+M_LIVEROOTC_STORAGE_TO_LITTER_FIRE - live root C storage fire mortality to litter gC/m^2/s F
+M_LIVEROOTC_TO_DEADROOTC_FIRE - live root C fire mortality to dead root C gC/m^2/s F
+M_LIVEROOTC_TO_FIRE - live root C fire loss gC/m^2/s F
+M_LIVEROOTC_TO_LITTER_FIRE - live root C fire mortality to litter gC/m^2/s F
+M_LIVEROOTC_XFER_TO_FIRE - live root C transfer fire loss gC/m^2/s F
+M_LIVEROOTC_XFER_TO_LITTER_FIRE - live root C transfer fire mortality to litter gC/m^2/s F
+M_LIVESTEMC_STORAGE_TO_FIRE - live stem C storage fire loss gC/m^2/s F
+M_LIVESTEMC_STORAGE_TO_LITTER - live stem C storage mortality gC/m^2/s F
+M_LIVESTEMC_STORAGE_TO_LITTER_FIRE - live stem C storage fire mortality to litter gC/m^2/s F
+M_LIVESTEMC_TO_DEADSTEMC_FIRE - live stem C fire mortality to dead stem C gC/m^2/s F
+M_LIVESTEMC_TO_FIRE - live stem C fire loss gC/m^2/s F
+M_LIVESTEMC_TO_LITTER - live stem C mortality gC/m^2/s F
+M_LIVESTEMC_TO_LITTER_FIRE - live stem C fire mortality to litter gC/m^2/s F
+M_LIVESTEMC_XFER_TO_FIRE - live stem C transfer fire loss gC/m^2/s F
+M_LIVESTEMC_XFER_TO_LITTER - live stem C transfer mortality gC/m^2/s F
+M_LIVESTEMC_XFER_TO_LITTER_FIRE - live stem C transfer fire mortality to litter gC/m^2/s F
+M_LIVESTEMN_STORAGE_TO_FIRE - live stem N storage fire loss gN/m^2/s F
+M_LIVESTEMN_STORAGE_TO_LITTER - live stem N storage mortality gN/m^2/s F
+M_LIVESTEMN_TO_FIRE - live stem N fire loss gN/m^2/s F
+M_LIVESTEMN_TO_LITTER - live stem N mortality gN/m^2/s F
+M_LIVESTEMN_XFER_TO_FIRE - live stem N transfer fire loss gN/m^2/s F
+M_LIVESTEMN_XFER_TO_LITTER - live stem N transfer mortality gN/m^2/s F
+M_RETRANSN_TO_FIRE - retranslocated N pool fire loss gN/m^2/s F
+M_RETRANSN_TO_LITTER - retranslocated N pool mortality gN/m^2/s F
+M_SOM_ACT_C_TO_LEACHING - active soil organic C leaching loss gC/m^2/s F
+M_SOM_ACT_N_TO_LEACHING - active soil organic N leaching loss gN/m^2/s F
+M_SOM_PAS_C_TO_LEACHING - passive soil organic C leaching loss gC/m^2/s F
+M_SOM_PAS_N_TO_LEACHING - passive soil organic N leaching loss gN/m^2/s F
+M_SOM_SLO_C_TO_LEACHING - slow soil organic ma C leaching loss gC/m^2/s F
+M_SOM_SLO_N_TO_LEACHING - slow soil organic ma N leaching loss gN/m^2/s F
+NACTIVE - Mycorrhizal N uptake flux gN/m^2/s T
+NACTIVE_NH4 - Mycorrhizal N uptake flux gN/m^2/s T
+NACTIVE_NO3 - Mycorrhizal N uptake flux gN/m^2/s T
+NAM - AM-associated N uptake flux gN/m^2/s T
+NAM_NH4 - AM-associated N uptake flux gN/m^2/s T
+NAM_NO3 - AM-associated N uptake flux gN/m^2/s T
+NBP - net biome production, includes fire, landuse, harvest and hrv_xsmrpool flux (latter smoothed o gC/m^2/s T
+NDEPLOY - total N deployed in new growth gN/m^2/s T
+NDEP_TO_SMINN - atmospheric N deposition to soil mineral N gN/m^2/s T
+NECM - ECM-associated N uptake flux gN/m^2/s T
+NECM_NH4 - ECM-associated N uptake flux gN/m^2/s T
+NECM_NO3 - ECM-associated N uptake flux gN/m^2/s T
+NEE - net ecosystem exchange of carbon, includes fire and hrv_xsmrpool (latter smoothed over the yea gC/m^2/s T
+NEM - Gridcell net adjustment to net carbon exchange passed to atm. for methane production gC/m2/s T
+NEP - net ecosystem production, excludes fire, landuse, and harvest flux, positive for sink gC/m^2/s T
+NET_NMIN - net rate of N mineralization gN/m^2/s T
+NFERTILIZATION - fertilizer added gN/m^2/s T
+NFIRE - fire counts valid only in Reg.C counts/km2/sec T
+NFIX - Symbiotic BNF uptake flux gN/m^2/s T
+NFIX_TO_SMINN - symbiotic/asymbiotic N fixation to soil mineral N gN/m^2/s F
+NNONMYC - Non-mycorrhizal N uptake flux gN/m^2/s T
+NNONMYC_NH4 - Non-mycorrhizal N uptake flux gN/m^2/s T
+NNONMYC_NO3 - Non-mycorrhizal N uptake flux gN/m^2/s T
+NPASSIVE - Passive N uptake flux gN/m^2/s T
+NPOOL - temporary plant N pool gN/m^2 T
+NPOOL_TO_DEADCROOTN - allocation to dead coarse root N gN/m^2/s F
+NPOOL_TO_DEADCROOTN_STORAGE - allocation to dead coarse root N storage gN/m^2/s F
+NPOOL_TO_DEADSTEMN - allocation to dead stem N gN/m^2/s F
+NPOOL_TO_DEADSTEMN_STORAGE - allocation to dead stem N storage gN/m^2/s F
+NPOOL_TO_FROOTN - allocation to fine root N gN/m^2/s F
+NPOOL_TO_FROOTN_STORAGE - allocation to fine root N storage gN/m^2/s F
+NPOOL_TO_LEAFN - allocation to leaf N gN/m^2/s F
+NPOOL_TO_LEAFN_STORAGE - allocation to leaf N storage gN/m^2/s F
+NPOOL_TO_LIVECROOTN - allocation to live coarse root N gN/m^2/s F
+NPOOL_TO_LIVECROOTN_STORAGE - allocation to live coarse root N storage gN/m^2/s F
+NPOOL_TO_LIVESTEMN - allocation to live stem N gN/m^2/s F
+NPOOL_TO_LIVESTEMN_STORAGE - allocation to live stem N storage gN/m^2/s F
+NPP - net primary production gC/m^2/s T
+NPP_BURNEDOFF - C that cannot be used for N uptake gC/m^2/s F
+NPP_GROWTH - Total C used for growth in FUN gC/m^2/s T
+NPP_NACTIVE - Mycorrhizal N uptake used C gC/m^2/s T
+NPP_NACTIVE_NH4 - Mycorrhizal N uptake use C gC/m^2/s T
+NPP_NACTIVE_NO3 - Mycorrhizal N uptake used C gC/m^2/s T
+NPP_NAM - AM-associated N uptake used C gC/m^2/s T
+NPP_NAM_NH4 - AM-associated N uptake use C gC/m^2/s T
+NPP_NAM_NO3 - AM-associated N uptake use C gC/m^2/s T
+NPP_NECM - ECM-associated N uptake used C gC/m^2/s T
+NPP_NECM_NH4 - ECM-associated N uptake use C gC/m^2/s T
+NPP_NECM_NO3 - ECM-associated N uptake used C gC/m^2/s T
+NPP_NFIX - Symbiotic BNF uptake used C gC/m^2/s T
+NPP_NNONMYC - Non-mycorrhizal N uptake used C gC/m^2/s T
+NPP_NNONMYC_NH4 - Non-mycorrhizal N uptake use C gC/m^2/s T
+NPP_NNONMYC_NO3 - Non-mycorrhizal N uptake use C gC/m^2/s T
+NPP_NRETRANS - Retranslocated N uptake flux gC/m^2/s T
+NPP_NUPTAKE - Total C used by N uptake in FUN gC/m^2/s T
+NRETRANS - Retranslocated N uptake flux gN/m^2/s T
+NRETRANS_REG - Retranslocated N uptake flux gN/m^2/s T
+NRETRANS_SEASON - Retranslocated N uptake flux gN/m^2/s T
+NRETRANS_STRESS - Retranslocated N uptake flux gN/m^2/s T
+NSUBSTEPS - number of adaptive timesteps in CLM timestep unitless F
+NUPTAKE - Total N uptake of FUN gN/m^2/s T
+NUPTAKE_NPP_FRACTION - frac of NPP used in N uptake - T
+N_ALLOMETRY - N allocation index none F
+OBU - Monin-Obukhov length m F
+OCDEP - total OC deposition (dry+wet) from atmosphere kg/m^2/s T
+OFFSET_COUNTER - offset days counter days F
+OFFSET_FDD - offset freezing degree days counter C degree-days F
+OFFSET_FLAG - offset flag none F
+OFFSET_SWI - offset soil water index none F
+ONSET_COUNTER - onset days counter days F
+ONSET_FDD - onset freezing degree days counter C degree-days F
+ONSET_FLAG - onset flag none F
+ONSET_GDD - onset growing degree days C degree-days F
+ONSET_GDDFLAG - onset flag for growing degree day sum none F
+ONSET_SWI - onset soil water index none F
+PAR240DZ - 10-day running mean of daytime patch absorbed PAR for leaves for top canopy layer W/m^2 F
+PAR240XZ - 10-day running mean of maximum patch absorbed PAR for leaves for top canopy layer W/m^2 F
+PAR240_shade - shade PAR (240 hrs) umol/m2/s F
+PAR240_sun - sunlit PAR (240 hrs) umol/m2/s F
+PAR24_shade - shade PAR (24 hrs) umol/m2/s F
+PAR24_sun - sunlit PAR (24 hrs) umol/m2/s F
+PARVEGLN - absorbed par by vegetation at local noon W/m^2 T
+PAR_shade - shade PAR umol/m2/s F
+PAR_sun - sunlit PAR umol/m2/s F
+PBOT - atmospheric pressure at surface (downscaled to columns in glacier regions) Pa T
+PBOT_240 - 10 day running mean of air pressure Pa F
+PCH4 - atmospheric partial pressure of CH4 Pa T
+PCO2 - atmospheric partial pressure of CO2 Pa T
+PCO2_240 - 10 day running mean of CO2 pressure Pa F
+PFT_CTRUNC - patch-level sink for C truncation gC/m^2 F
+PFT_FIRE_CLOSS - total patch-level fire C loss for non-peat fires outside land-type converted region gC/m^2/s T
+PFT_FIRE_NLOSS - total patch-level fire N loss gN/m^2/s T
+PFT_NTRUNC - patch-level sink for N truncation gN/m^2 F
+PLANTCN - Plant C:N used by FUN unitless F
+PLANT_CALLOC - total allocated C flux gC/m^2/s F
+PLANT_NALLOC - total allocated N flux gN/m^2/s F
+PLANT_NDEMAND - N flux required to support initial GPP gN/m^2/s T
+PNLCZ - Proportion of nitrogen allocated for light capture unitless F
+PO2_240 - 10 day running mean of O2 pressure Pa F
+POTENTIAL_IMMOB - potential N immobilization gN/m^2/s T
+POT_F_DENIT - potential denitrification flux gN/m^2/s T
+POT_F_NIT - potential nitrification flux gN/m^2/s T
+PREC10 - 10-day running mean of PREC MM H2O/S F
+PREC60 - 60-day running mean of PREC MM H2O/S F
+PREV_DAYL - daylength from previous timestep s F
+PREV_FROOTC_TO_LITTER - previous timestep froot C litterfall flux gC/m^2/s F
+PREV_LEAFC_TO_LITTER - previous timestep leaf C litterfall flux gC/m^2/s F
+PROD100C - 100-yr wood product C gC/m^2 F
+PROD100C_LOSS - loss from 100-yr wood product pool gC/m^2/s F
+PROD100N - 100-yr wood product N gN/m^2 F
+PROD100N_LOSS - loss from 100-yr wood product pool gN/m^2/s F
+PROD10C - 10-yr wood product C gC/m^2 F
+PROD10C_LOSS - loss from 10-yr wood product pool gC/m^2/s F
+PROD10N - 10-yr wood product N gN/m^2 F
+PROD10N_LOSS - loss from 10-yr wood product pool gN/m^2/s F
+PSNSHA - shaded leaf photosynthesis umolCO2/m^2/s T
+PSNSHADE_TO_CPOOL - C fixation from shaded canopy gC/m^2/s T
+PSNSUN - sunlit leaf photosynthesis umolCO2/m^2/s T
+PSNSUN_TO_CPOOL - C fixation from sunlit canopy gC/m^2/s T
+PSurf - atmospheric pressure at surface (downscaled to columns in glacier regions) Pa F
+Q2M - 2m specific humidity kg/kg T
+QAF - canopy air humidity kg/kg F
+QBOT - atmospheric specific humidity (downscaled to columns in glacier regions) kg/kg T
+QDIRECT_THROUGHFALL - direct throughfall of liquid (rain + above-canopy irrigation) mm/s F
+QDIRECT_THROUGHFALL_SNOW - direct throughfall of snow mm/s F
+QDRAI - sub-surface drainage mm/s T
+QDRAI_PERCH - perched wt drainage mm/s T
+QDRAI_XS - saturation excess drainage mm/s T
+QDRIP - rate of excess canopy liquid falling off canopy mm/s F
+QDRIP_SNOW - rate of excess canopy snow falling off canopy mm/s F
+QFLOOD - runoff from river flooding mm/s T
+QFLX_EVAP_TOT - qflx_evap_soi + qflx_evap_can + qflx_tran_veg kg m-2 s-1 T
+QFLX_EVAP_VEG - vegetation evaporation mm H2O/s F
+QFLX_ICE_DYNBAL - ice dynamic land cover change conversion runoff flux mm/s T
+QFLX_LIQDEW_TO_TOP_LAYER - rate of liquid water deposited on top soil or snow layer (dew) mm H2O/s T
+QFLX_LIQEVAP_FROM_TOP_LAYER - rate of liquid water evaporated from top soil or snow layer mm H2O/s T
+QFLX_LIQ_DYNBAL - liq dynamic land cover change conversion runoff flux mm/s T
+QFLX_LIQ_GRND - liquid (rain+irrigation) on ground after interception mm H2O/s F
+QFLX_SNOW_DRAIN - drainage from snow pack mm/s T
+QFLX_SNOW_DRAIN_ICE - drainage from snow pack melt (ice landunits only) mm/s T
+QFLX_SNOW_GRND - snow on ground after interception mm H2O/s F
+QFLX_SOLIDDEW_TO_TOP_LAYER - rate of solid water deposited on top soil or snow layer (frost) mm H2O/s T
+QFLX_SOLIDEVAP_FROM_TOP_LAYER - rate of ice evaporated from top soil or snow layer (sublimation) (also includes bare ice subli mm H2O/s T
+QFLX_SOLIDEVAP_FROM_TOP_LAYER_ICE - rate of ice evaporated from top soil or snow layer (sublimation) (also includes bare ice subli mm H2O/s F
+QH2OSFC - surface water runoff mm/s T
+QH2OSFC_TO_ICE - surface water converted to ice mm/s F
+QHR - hydraulic redistribution mm/s T
+QICE - ice growth/melt mm/s T
+QICE_FRZ - ice growth mm/s T
+QICE_MELT - ice melt mm/s T
+QINFL - infiltration mm/s T
+QINTR - interception mm/s T
+QIRRIG_DEMAND - irrigation demand mm/s F
+QIRRIG_DRIP - water added via drip irrigation mm/s F
+QIRRIG_FROM_GW_CONFINED - water added through confined groundwater irrigation mm/s T
+QIRRIG_FROM_GW_UNCONFINED - water added through unconfined groundwater irrigation mm/s T
+QIRRIG_FROM_SURFACE - water added through surface water irrigation mm/s T
+QIRRIG_SPRINKLER - water added via sprinkler irrigation mm/s F
+QOVER - total surface runoff (includes QH2OSFC) mm/s T
+QOVER_LAG - time-lagged surface runoff for soil columns mm/s F
+QPHSNEG - net negative hydraulic redistribution flux mm/s F
+QRGWL - surface runoff at glaciers (liquid only), wetlands, lakes; also includes melted ice runoff fro mm/s T
+QRUNOFF - total liquid runoff not including correction for land use change mm/s T
+QRUNOFF_ICE - total liquid runoff not incl corret for LULCC (ice landunits only) mm/s T
+QRUNOFF_ICE_TO_COUPLER - total ice runoff sent to coupler (includes corrections for land use change) mm/s T
+QRUNOFF_ICE_TO_LIQ - liquid runoff from converted ice runoff mm/s F
+QRUNOFF_R - Rural total runoff mm/s F
+QRUNOFF_TO_COUPLER - total liquid runoff sent to coupler (includes corrections for land use change) mm/s T
+QRUNOFF_U - Urban total runoff mm/s F
+QSNOCPLIQ - excess liquid h2o due to snow capping not including correction for land use change mm H2O/s T
+QSNOEVAP - evaporation from snow (only when snl<0, otherwise it is equal to qflx_ev_soil) mm/s T
+QSNOFRZ - column-integrated snow freezing rate kg/m2/s T
+QSNOFRZ_ICE - column-integrated snow freezing rate (ice landunits only) mm/s T
+QSNOMELT - snow melt rate mm/s T
+QSNOMELT_ICE - snow melt (ice landunits only) mm/s T
+QSNOUNLOAD - canopy snow unloading mm/s T
+QSNO_TEMPUNLOAD - canopy snow temp unloading mm/s T
+QSNO_WINDUNLOAD - canopy snow wind unloading mm/s T
+QSNWCPICE - excess solid h2o due to snow capping not including correction for land use change mm H2O/s T
+QSOIL - Ground evaporation (soil/snow evaporation + soil/snow sublimation - dew) mm/s T
+QSOIL_ICE - Ground evaporation (ice landunits only) mm/s T
+QTOPSOIL - water input to surface mm/s F
+QVEGE - canopy evaporation mm/s T
+QVEGT - canopy transpiration mm/s T
+Qair - atmospheric specific humidity (downscaled to columns in glacier regions) kg/kg F
+Qh - sensible heat W/m^2 F
+Qle - total evaporation W/m^2 F
+Qstor - storage heat flux (includes snowmelt) W/m^2 F
+Qtau - momentum flux kg/m/s^2 F
+RAH1 - aerodynamical resistance s/m F
+RAH2 - aerodynamical resistance s/m F
+RAIN - atmospheric rain, after rain/snow repartitioning based on temperature mm/s T
+RAIN_FROM_ATM - atmospheric rain received from atmosphere (pre-repartitioning) mm/s T
+RAIN_ICE - atmospheric rain, after rain/snow repartitioning based on temperature (ice landunits only) mm/s F
+RAM1 - aerodynamical resistance s/m F
+RAM_LAKE - aerodynamic resistance for momentum (lakes only) s/m F
+RAW1 - aerodynamical resistance s/m F
+RAW2 - aerodynamical resistance s/m F
+RB - leaf boundary resistance s/m F
+RB10 - 10 day running mean boundary layer resistance s/m F
+RETRANSN - plant pool of retranslocated N gN/m^2 T
+RETRANSN_TO_NPOOL - deployment of retranslocated N gN/m^2/s T
+RH - atmospheric relative humidity % F
+RH2M - 2m relative humidity % T
+RH2M_R - Rural 2m specific humidity % F
+RH2M_U - Urban 2m relative humidity % F
+RH30 - 30-day running mean of relative humidity % F
+RHAF - fractional humidity of canopy air fraction F
+RHAF10 - 10 day running mean of fractional humidity of canopy air fraction F
+RH_LEAF - fractional humidity at leaf surface fraction F
+RR - root respiration (fine root MR + total root GR) gC/m^2/s T
+RSSHA - shaded leaf stomatal resistance s/m T
+RSSUN - sunlit leaf stomatal resistance s/m T
+Rainf - atmospheric rain, after rain/snow repartitioning based on temperature mm/s F
+Rnet - net radiation W/m^2 F
+SABG - solar rad absorbed by ground W/m^2 T
+SABG_PEN - Rural solar rad penetrating top soil or snow layer watt/m^2 T
+SABV - solar rad absorbed by veg W/m^2 T
+SEEDC - pool for seeding new PFTs via dynamic landcover gC/m^2 T
+SEEDN - pool for seeding new PFTs via dynamic landcover gN/m^2 T
+SLASH_HARVESTC - slash harvest carbon (to litter) gC/m^2/s T
+SMINN - soil mineral N gN/m^2 T
+SMINN_TO_NPOOL - deployment of soil mineral N uptake gN/m^2/s T
+SMINN_TO_PLANT - plant uptake of soil mineral N gN/m^2/s T
+SMINN_TO_PLANT_FUN - Total soil N uptake of FUN gN/m^2/s T
+SMINN_TO_S1N_L1 - mineral N flux for decomp. of LIT_METto SOM_ACT gN/m^2 F
+SMINN_TO_S1N_L2 - mineral N flux for decomp. of LIT_CELto SOM_ACT gN/m^2 F
+SMINN_TO_S1N_S2 - mineral N flux for decomp. of SOM_SLOto SOM_ACT gN/m^2 F
+SMINN_TO_S1N_S3 - mineral N flux for decomp. of SOM_PASto SOM_ACT gN/m^2 F
+SMINN_TO_S2N_L3 - mineral N flux for decomp. of LIT_LIGto SOM_SLO gN/m^2 F
+SMINN_TO_S2N_S1 - mineral N flux for decomp. of SOM_ACTto SOM_SLO gN/m^2 F
+SMINN_TO_S3N_S1 - mineral N flux for decomp. of SOM_ACTto SOM_PAS gN/m^2 F
+SMINN_TO_S3N_S2 - mineral N flux for decomp. of SOM_SLOto SOM_PAS gN/m^2 F
+SMIN_NH4 - soil mineral NH4 gN/m^2 T
+SMIN_NO3 - soil mineral NO3 gN/m^2 T
+SMIN_NO3_LEACHED - soil NO3 pool loss to leaching gN/m^2/s T
+SMIN_NO3_RUNOFF - soil NO3 pool loss to runoff gN/m^2/s T
+SNOBCMCL - mass of BC in snow column kg/m2 T
+SNOBCMSL - mass of BC in top snow layer kg/m2 T
+SNOCAN - intercepted snow mm T
+SNODSTMCL - mass of dust in snow column kg/m2 T
+SNODSTMSL - mass of dust in top snow layer kg/m2 T
+SNOFSDSND - direct nir incident solar radiation on snow W/m^2 F
+SNOFSDSNI - diffuse nir incident solar radiation on snow W/m^2 F
+SNOFSDSVD - direct vis incident solar radiation on snow W/m^2 F
+SNOFSDSVI - diffuse vis incident solar radiation on snow W/m^2 F
+SNOFSRND - direct nir reflected solar radiation from snow W/m^2 T
+SNOFSRNI - diffuse nir reflected solar radiation from snow W/m^2 T
+SNOFSRVD - direct vis reflected solar radiation from snow W/m^2 T
+SNOFSRVI - diffuse vis reflected solar radiation from snow W/m^2 T
+SNOINTABS - Fraction of incoming solar absorbed by lower snow layers - T
+SNOLIQFL - top snow layer liquid water fraction (land) fraction F
+SNOOCMCL - mass of OC in snow column kg/m2 T
+SNOOCMSL - mass of OC in top snow layer kg/m2 T
+SNORDSL - top snow layer effective grain radius m^-6 F
+SNOTTOPL - snow temperature (top layer) K F
+SNOTTOPL_ICE - snow temperature (top layer, ice landunits only) K F
+SNOTXMASS - snow temperature times layer mass, layer sum; to get mass-weighted temperature, divide by (SNO K kg/m2 T
+SNOTXMASS_ICE - snow temperature times layer mass, layer sum (ice landunits only); to get mass-weighted temper K kg/m2 F
+SNOW - atmospheric snow, after rain/snow repartitioning based on temperature mm/s T
+SNOWDP - gridcell mean snow height m T
+SNOWICE - snow ice kg/m2 T
+SNOWICE_ICE - snow ice (ice landunits only) kg/m2 F
+SNOWLIQ - snow liquid water kg/m2 T
+SNOWLIQ_ICE - snow liquid water (ice landunits only) kg/m2 F
+SNOW_5D - 5day snow avg m F
+SNOW_DEPTH - snow height of snow covered area m T
+SNOW_DEPTH_ICE - snow height of snow covered area (ice landunits only) m F
+SNOW_FROM_ATM - atmospheric snow received from atmosphere (pre-repartitioning) mm/s T
+SNOW_ICE - atmospheric snow, after rain/snow repartitioning based on temperature (ice landunits only) mm/s F
+SNOW_PERSISTENCE - Length of time of continuous snow cover (nat. veg. landunits only) seconds T
+SNOW_SINKS - snow sinks (liquid water) mm/s T
+SNOW_SOURCES - snow sources (liquid water) mm/s T
+SNOdTdzL - top snow layer temperature gradient (land) K/m F
+SOIL10 - 10-day running mean of 12cm layer soil K F
+SOILC_CHANGE - C change in soil gC/m^2/s T
+SOILC_HR - soil C heterotrophic respiration gC/m^2/s T
+SOILRESIS - soil resistance to evaporation s/m T
+SOILWATER_10CM - soil liquid water + ice in top 10cm of soil (veg landunits only) kg/m2 T
+SOMC_FIRE - C loss due to peat burning gC/m^2/s T
+SOMFIRE - soil organic matter fire losses gC/m^2/s F
+SOM_ACT_C - SOM_ACT C gC/m^2 T
+SOM_ACT_C_1m - SOM_ACT C to 1 meter gC/m^2 F
+SOM_ACT_C_TO_SOM_PAS_C - decomp. of active soil organic C to passive soil organic C gC/m^2/s F
+SOM_ACT_C_TO_SOM_SLO_C - decomp. of active soil organic C to slow soil organic ma C gC/m^2/s F
+SOM_ACT_HR_S2 - Het. Resp. from active soil organic gC/m^2/s F
+SOM_ACT_HR_S3 - Het. Resp. from active soil organic gC/m^2/s F
+SOM_ACT_N - SOM_ACT N gN/m^2 T
+SOM_ACT_N_1m - SOM_ACT N to 1 meter gN/m^2 F
+SOM_ACT_N_TO_SOM_PAS_N - decomp. of active soil organic N to passive soil organic N gN/m^2 F
+SOM_ACT_N_TO_SOM_SLO_N - decomp. of active soil organic N to slow soil organic ma N gN/m^2 F
+SOM_C_LEACHED - total flux of C from SOM pools due to leaching gC/m^2/s T
+SOM_N_LEACHED - total flux of N from SOM pools due to leaching gN/m^2/s F
+SOM_PAS_C - SOM_PAS C gC/m^2 T
+SOM_PAS_C_1m - SOM_PAS C to 1 meter gC/m^2 F
+SOM_PAS_C_TO_SOM_ACT_C - decomp. of passive soil organic C to active soil organic C gC/m^2/s F
+SOM_PAS_HR - Het. Resp. from passive soil organic gC/m^2/s F
+SOM_PAS_N - SOM_PAS N gN/m^2 T
+SOM_PAS_N_1m - SOM_PAS N to 1 meter gN/m^2 F
+SOM_PAS_N_TO_SOM_ACT_N - decomp. of passive soil organic N to active soil organic N gN/m^2 F
+SOM_SLO_C - SOM_SLO C gC/m^2 T
+SOM_SLO_C_1m - SOM_SLO C to 1 meter gC/m^2 F
+SOM_SLO_C_TO_SOM_ACT_C - decomp. of slow soil organic ma C to active soil organic C gC/m^2/s F
+SOM_SLO_C_TO_SOM_PAS_C - decomp. of slow soil organic ma C to passive soil organic C gC/m^2/s F
+SOM_SLO_HR_S1 - Het. Resp. from slow soil organic ma gC/m^2/s F
+SOM_SLO_HR_S3 - Het. Resp. from slow soil organic ma gC/m^2/s F
+SOM_SLO_N - SOM_SLO N gN/m^2 T
+SOM_SLO_N_1m - SOM_SLO N to 1 meter gN/m^2 F
+SOM_SLO_N_TO_SOM_ACT_N - decomp. of slow soil organic ma N to active soil organic N gN/m^2 F
+SOM_SLO_N_TO_SOM_PAS_N - decomp. of slow soil organic ma N to passive soil organic N gN/m^2 F
+SR - total soil respiration (HR + root resp) gC/m^2/s T
+STORAGE_CDEMAND - C use from the C storage pool gC/m^2 F
+STORAGE_GR - growth resp for growth sent to storage for later display gC/m^2/s F
+STORAGE_NDEMAND - N demand during the offset period gN/m^2 F
+STORVEGC - stored vegetation carbon, excluding cpool gC/m^2 T
+STORVEGN - stored vegetation nitrogen gN/m^2 T
+SUPPLEMENT_TO_SMINN - supplemental N supply gN/m^2/s T
+SWBGT - 2 m Simplified Wetbulb Globe Temp C T
+SWBGT_R - Rural 2 m Simplified Wetbulb Globe Temp C T
+SWBGT_U - Urban 2 m Simplified Wetbulb Globe Temp C T
+SWdown - atmospheric incident solar radiation W/m^2 F
+SWup - upwelling shortwave radiation W/m^2 F
+SoilAlpha - factor limiting ground evap unitless F
+SoilAlpha_U - urban factor limiting ground evap unitless F
+T10 - 10-day running mean of 2-m temperature K F
+TAF - canopy air temperature K F
+TAUX - zonal surface stress kg/m/s^2 T
+TAUY - meridional surface stress kg/m/s^2 T
+TBOT - atmospheric air temperature (downscaled to columns in glacier regions) K T
+TBUILD - internal urban building air temperature K T
+TBUILD_MAX - prescribed maximum interior building temperature K F
+TEMPAVG_T2M - temporary average 2m air temperature K F
+TEMPMAX_RETRANSN - temporary annual max of retranslocated N pool gN/m^2 F
+TEMPSUM_POTENTIAL_GPP - temporary annual sum of potential GPP gC/m^2/yr F
+TFLOOR - floor temperature K F
+TG - ground temperature K T
+TG_ICE - ground temperature (ice landunits only) K F
+TG_R - Rural ground temperature K F
+TG_U - Urban ground temperature K F
+TH2OSFC - surface water temperature K T
+THBOT - atmospheric air potential temperature (downscaled to columns in glacier regions) K T
+TKE1 - top lake level eddy thermal conductivity W/(mK) T
+TLAI - total projected leaf area index m^2/m^2 T
+TOPO_COL - column-level topographic height m F
+TOPO_COL_ICE - column-level topographic height (ice landunits only) m F
+TOPT - topt coefficient for VOC calc non F
+TOTCOLC - total column carbon, incl veg and cpool but excl product pools gC/m^2 T
+TOTCOLCH4 - total belowground CH4 (0 for non-lake special landunits in the absence of dynamic landunits) gC/m2 T
+TOTCOLN - total column-level N, excluding product pools gN/m^2 T
+TOTECOSYSC - total ecosystem carbon, incl veg but excl cpool and product pools gC/m^2 T
+TOTECOSYSN - total ecosystem N, excluding product pools gN/m^2 T
+TOTFIRE - total ecosystem fire losses gC/m^2/s F
+TOTLITC - total litter carbon gC/m^2 T
+TOTLITC_1m - total litter carbon to 1 meter depth gC/m^2 T
+TOTLITN - total litter N gN/m^2 T
+TOTLITN_1m - total litter N to 1 meter gN/m^2 T
+TOTPFTC - total patch-level carbon, including cpool gC/m^2 T
+TOTPFTN - total patch-level nitrogen gN/m^2 T
+TOTSOILICE - vertically summed soil ice (veg landunits only) kg/m2 T
+TOTSOILLIQ - vertically summed soil liquid water (veg landunits only) kg/m2 T
+TOTSOMC - total soil organic matter carbon gC/m^2 T
+TOTSOMC_1m - total soil organic matter carbon to 1 meter depth gC/m^2 T
+TOTSOMN - total soil organic matter N gN/m^2 T
+TOTSOMN_1m - total soil organic matter N to 1 meter gN/m^2 T
+TOTVEGC - total vegetation carbon, excluding cpool gC/m^2 T
+TOTVEGN - total vegetation nitrogen gN/m^2 T
+TOT_WOODPRODC - total wood product C gC/m^2 T
+TOT_WOODPRODC_LOSS - total loss from wood product pools gC/m^2/s T
+TOT_WOODPRODN - total wood product N gN/m^2 T
+TOT_WOODPRODN_LOSS - total loss from wood product pools gN/m^2/s T
+TPU25T - canopy profile of tpu umol/m2/s T
+TRAFFICFLUX - sensible heat flux from urban traffic W/m^2 F
+TRANSFER_DEADCROOT_GR - dead coarse root growth respiration from storage gC/m^2/s F
+TRANSFER_DEADSTEM_GR - dead stem growth respiration from storage gC/m^2/s F
+TRANSFER_FROOT_GR - fine root growth respiration from storage gC/m^2/s F
+TRANSFER_GR - growth resp for transfer growth displayed in this timestep gC/m^2/s F
+TRANSFER_LEAF_GR - leaf growth respiration from storage gC/m^2/s F
+TRANSFER_LIVECROOT_GR - live coarse root growth respiration from storage gC/m^2/s F
+TRANSFER_LIVESTEM_GR - live stem growth respiration from storage gC/m^2/s F
+TREFMNAV - daily minimum of average 2-m temperature K T
+TREFMNAV_R - Rural daily minimum of average 2-m temperature K F
+TREFMNAV_U - Urban daily minimum of average 2-m temperature K F
+TREFMXAV - daily maximum of average 2-m temperature K T
+TREFMXAV_R - Rural daily maximum of average 2-m temperature K F
+TREFMXAV_U - Urban daily maximum of average 2-m temperature K F
+TROOF_INNER - roof inside surface temperature K F
+TSA - 2m air temperature K T
+TSAI - total projected stem area index m^2/m^2 T
+TSA_ICE - 2m air temperature (ice landunits only) K F
+TSA_R - Rural 2m air temperature K F
+TSA_U - Urban 2m air temperature K F
+TSHDW_INNER - shadewall inside surface temperature K F
+TSKIN - skin temperature K T
+TSL - temperature of near-surface soil layer (natural vegetated and crop landunits only) K T
+TSOI_10CM - soil temperature in top 10cm of soil K T
+TSUNW_INNER - sunwall inside surface temperature K F
+TV - vegetation temperature K T
+TV24 - vegetation temperature (last 24hrs) K F
+TV240 - vegetation temperature (last 240hrs) K F
+TVEGD10 - 10 day running mean of patch daytime vegetation temperature Kelvin F
+TVEGN10 - 10 day running mean of patch night-time vegetation temperature Kelvin F
+TWS - total water storage mm T
+Tair - atmospheric air temperature (downscaled to columns in glacier regions) K F
+Tair_from_atm - atmospheric air temperature received from atmosphere (pre-downscaling) K F
+U10 - 10-m wind m/s T
+U10_DUST - 10-m wind for dust model m/s T
+U10_ICE - 10-m wind (ice landunits only) m/s F
+UAF - canopy air speed m/s F
+ULRAD - upward longwave radiation above the canopy W/m^2 F
+UM - wind speed plus stability effect m/s F
+URBAN_AC - urban air conditioning flux W/m^2 T
+URBAN_HEAT - urban heating flux W/m^2 T
+USTAR - aerodynamical resistance s/m F
+UST_LAKE - friction velocity (lakes only) m/s F
+VA - atmospheric wind speed plus convective velocity m/s F
+VCMX25T - canopy profile of vcmax25 umol/m2/s T
+VENTILATION - sensible heat flux from building ventilation W/m^2 T
+VOCFLXT - total VOC flux into atmosphere moles/m2/sec F
+VOLR - river channel total water storage m3 T
+VOLRMCH - river channel main channel water storage m3 T
+VPD - vpd Pa F
+VPD2M - 2m vapor pressure deficit Pa T
+VPD_CAN - canopy vapor pressure deficit kPa T
+Vcmx25Z - canopy profile of vcmax25 predicted by LUNA model umol/m2/s T
+WASTEHEAT - sensible heat flux from heating/cooling sources of urban waste heat W/m^2 T
+WBT - 2 m Stull Wet Bulb C T
+WBT_R - Rural 2 m Stull Wet Bulb C T
+WBT_U - Urban 2 m Stull Wet Bulb C T
+WF - soil water as frac. of whc for top 0.05 m proportion F
+WIND - atmospheric wind velocity magnitude m/s T
+WOODC - wood C gC/m^2 T
+WOODC_ALLOC - wood C eallocation gC/m^2/s T
+WOODC_LOSS - wood C loss gC/m^2/s T
+WOOD_HARVESTC - wood harvest carbon (to product pools) gC/m^2/s T
+WOOD_HARVESTN - wood harvest N (to product pools) gN/m^2/s T
+WTGQ - surface tracer conductance m/s T
+Wind - atmospheric wind velocity magnitude m/s F
+XSMRPOOL - temporary photosynthate C pool gC/m^2 T
+XSMRPOOL_LOSS - temporary photosynthate C pool loss gC/m^2 F
+XSMRPOOL_RECOVER - C flux assigned to recovery of negative xsmrpool gC/m^2/s T
+Z0HG - roughness length over ground, sensible heat (vegetated landunits only) m F
+Z0HV - roughness length over vegetation, sensible heat m F
+Z0MG - roughness length over ground, momentum (vegetated landunits only) m F
+Z0MV - roughness length over vegetation, momentum m F
+Z0MV_DENSE - roughness length over vegetation, momentum, for dense canopy m F
+Z0M_TO_COUPLER - roughness length, momentum: gridcell average sent to coupler m F
+Z0QG - roughness length over ground, latent heat (vegetated landunits only) m F
+Z0QV - roughness length over vegetation, latent heat m F
+ZBOT - atmospheric reference height m T
+ZETA - dimensionless stability parameter unitless F
+ZII - convective boundary height m F
+ZWT - water table depth (natural vegetated and crop landunits only) m T
+ZWT_CH4_UNSAT - depth of water table for methane production used in non-inundated area m T
+ZWT_PERCH - perched water table depth (natural vegetated and crop landunits only) m T
+currentPatch - currentPatch coefficient for VOC calc non F
+num_iter - number of iterations unitless F
+QICE_FORC elevclas qice forcing sent to GLC mm/s F
+TOPO_FORC elevclas topograephic height sent to GLC m F
+TSRF_FORC elevclas surface temperature sent to GLC K F
+ACTUAL_IMMOB_NH4 levdcmp immobilization of NH4 gN/m^3/s F
+ACTUAL_IMMOB_NO3 levdcmp immobilization of NO3 gN/m^3/s F
+ACTUAL_IMMOB_vr levdcmp actual N immobilization gN/m^3/s F
+CROOT_PROF levdcmp profile for litter C and N inputs from coarse roots 1/m F
+CWD_C_TO_LIT_CEL_C_vr levdcmp decomp. of coarse woody debris C to cellulosic litter C gC/m^3/s F
+CWD_C_TO_LIT_LIG_C_vr levdcmp decomp. of coarse woody debris C to lignin litter C gC/m^3/s F
+CWD_HR_L2_vr levdcmp Het. Resp. from coarse woody debris gC/m^3/s F
+CWD_HR_L3_vr levdcmp Het. Resp. from coarse woody debris gC/m^3/s F
+CWD_N_TO_LIT_CEL_N_vr levdcmp decomp. of coarse woody debris N to cellulosic litter N gN/m^3 F
+CWD_N_TO_LIT_LIG_N_vr levdcmp decomp. of coarse woody debris N to lignin litter N gN/m^3 F
+CWD_N_vr levdcmp CWD N (vertically resolved) gN/m^3 T
+CWD_PATHFRAC_L2_vr levdcmp PATHFRAC from coarse woody debris to cellulosic litter fraction F
+CWD_PATHFRAC_L3_vr levdcmp PATHFRAC from coarse woody debris to lignin litter fraction F
+CWD_RESP_FRAC_L2_vr levdcmp respired from coarse woody debris to cellulosic litter fraction F
+CWD_RESP_FRAC_L3_vr levdcmp respired from coarse woody debris to lignin litter fraction F
+DWT_DEADCROOTC_TO_CWDC levdcmp dead coarse root to CWD due to landcover change gC/m^2/s F
+DWT_DEADCROOTN_TO_CWDN levdcmp dead coarse root to CWD due to landcover change gN/m^2/s F
+DWT_FROOTC_TO_LIT_CEL_C levdcmp fine root to cellulosic litter due to landcover change gC/m^2/s F
+DWT_FROOTC_TO_LIT_LIG_C levdcmp fine root to lignin litter due to landcover change gC/m^2/s F
+DWT_FROOTC_TO_LIT_MET_C levdcmp fine root to metabolic litter due to landcover change gC/m^2/s F
+DWT_FROOTN_TO_LIT_CEL_N levdcmp fine root N to cellulosic litter due to landcover change gN/m^2/s F
+DWT_FROOTN_TO_LIT_LIG_N levdcmp fine root N to lignin litter due to landcover change gN/m^2/s F
+DWT_FROOTN_TO_LIT_MET_N levdcmp fine root N to metabolic litter due to landcover change gN/m^2/s F
+DWT_LIVECROOTC_TO_CWDC levdcmp live coarse root to CWD due to landcover change gC/m^2/s F
+DWT_LIVECROOTN_TO_CWDN levdcmp live coarse root to CWD due to landcover change gN/m^2/s F
+FMAX_DENIT_CARBONSUBSTRATE levdcmp FMAX_DENIT_CARBONSUBSTRATE gN/m^3/s F
+FMAX_DENIT_NITRATE levdcmp FMAX_DENIT_NITRATE gN/m^3/s F
+FPI_vr levdcmp fraction of potential immobilization proportion F
+FROOT_PROF levdcmp profile for litter C and N inputs from fine roots 1/m F
+F_DENIT_BASE levdcmp F_DENIT_BASE gN/m^3/s F
+F_DENIT_vr levdcmp denitrification flux gN/m^3/s F
+F_NIT_vr levdcmp nitrification flux gN/m^3/s F
+GROSS_NMIN_vr levdcmp gross rate of N mineralization gN/m^3/s F
+K_CWD levdcmp coarse woody debris potential loss coefficient 1/s F
+K_LIT_CEL levdcmp cellulosic litter potential loss coefficient 1/s F
+K_LIT_LIG levdcmp lignin litter potential loss coefficient 1/s F
+K_LIT_MET levdcmp metabolic litter potential loss coefficient 1/s F
+K_NITR levdcmp K_NITR 1/s F
+K_NITR_H2O levdcmp K_NITR_H2O unitless F
+K_NITR_PH levdcmp K_NITR_PH unitless F
+K_NITR_T levdcmp K_NITR_T unitless F
+K_SOM_ACT levdcmp active soil organic potential loss coefficient 1/s F
+K_SOM_PAS levdcmp passive soil organic potential loss coefficient 1/s F
+K_SOM_SLO levdcmp slow soil organic ma potential loss coefficient 1/s F
+L1_PATHFRAC_S1_vr levdcmp PATHFRAC from metabolic litter to active soil organic fraction F
+L1_RESP_FRAC_S1_vr levdcmp respired from metabolic litter to active soil organic fraction F
+L2_PATHFRAC_S1_vr levdcmp PATHFRAC from cellulosic litter to active soil organic fraction F
+L2_RESP_FRAC_S1_vr levdcmp respired from cellulosic litter to active soil organic fraction F
+L3_PATHFRAC_S2_vr levdcmp PATHFRAC from lignin litter to slow soil organic ma fraction F
+L3_RESP_FRAC_S2_vr levdcmp respired from lignin litter to slow soil organic ma fraction F
+LEAF_PROF levdcmp profile for litter C and N inputs from leaves 1/m F
+LIT_CEL_C_TNDNCY_VERT_TR levdcmp cellulosic litter C tendency due to vertical transport gC/m^3/s F
+LIT_CEL_C_TO_SOM_ACT_C_v levdcmp decomp. of cellulosic litter C to active soil organic C gC/m^3/s F
+LIT_CEL_HR_vr levdcmp Het. Resp. from cellulosic litter gC/m^3/s F
+LIT_CEL_N_TNDNCY_VERT_TR levdcmp cellulosic litter N tendency due to vertical transport gN/m^3/s F
+LIT_CEL_N_TO_SOM_ACT_N_v levdcmp decomp. of cellulosic litter N to active soil organic N gN/m^3 F
+LIT_CEL_N_vr levdcmp LIT_CEL N (vertically resolved) gN/m^3 T
+LIT_LIG_C_TNDNCY_VERT_TR levdcmp lignin litter C tendency due to vertical transport gC/m^3/s F
+LIT_LIG_C_TO_SOM_SLO_C_v levdcmp decomp. of lignin litter C to slow soil organic ma C gC/m^3/s F
+LIT_LIG_HR_vr levdcmp Het. Resp. from lignin litter gC/m^3/s F
+LIT_LIG_N_TNDNCY_VERT_TR levdcmp lignin litter N tendency due to vertical transport gN/m^3/s F
+LIT_LIG_N_TO_SOM_SLO_N_v levdcmp decomp. of lignin litter N to slow soil organic ma N gN/m^3 F
+LIT_LIG_N_vr levdcmp LIT_LIG N (vertically resolved) gN/m^3 T
+LIT_MET_C_TNDNCY_VERT_TR levdcmp metabolic litter C tendency due to vertical transport gC/m^3/s F
+LIT_MET_C_TO_SOM_ACT_C_v levdcmp decomp. of metabolic litter C to active soil organic C gC/m^3/s F
+LIT_MET_HR_vr levdcmp Het. Resp. from metabolic litter gC/m^3/s F
+LIT_MET_N_TNDNCY_VERT_TR levdcmp metabolic litter N tendency due to vertical transport gN/m^3/s F
+LIT_MET_N_TO_SOM_ACT_N_v levdcmp decomp. of metabolic litter N to active soil organic N gN/m^3 F
+LIT_MET_N_vr levdcmp LIT_MET N (vertically resolved) gN/m^3 T
+M_CWD_C_TO_FIRE_vr levdcmp coarse woody debris C fire loss gC/m^3/s F
+M_CWD_N_TO_FIRE_vr levdcmp coarse woody debris N fire loss gN/m^3 F
+M_LIT_CEL_C_TO_FIRE_vr levdcmp cellulosic litter C fire loss gC/m^3/s F
+M_LIT_CEL_N_TO_FIRE_vr levdcmp cellulosic litter N fire loss gN/m^3 F
+M_LIT_LIG_C_TO_FIRE_vr levdcmp lignin litter C fire loss gC/m^3/s F
+M_LIT_LIG_N_TO_FIRE_vr levdcmp lignin litter N fire loss gN/m^3 F
+M_LIT_MET_C_TO_FIRE_vr levdcmp metabolic litter C fire loss gC/m^3/s F
+M_LIT_MET_N_TO_FIRE_vr levdcmp metabolic litter N fire loss gN/m^3 F
+NDEP_PROF levdcmp profile for atmospheric N deposition 1/m F
+NET_NMIN_vr levdcmp net rate of N mineralization gN/m^3/s F
+NFIXATION_PROF levdcmp profile for biological N fixation 1/m F
+POTENTIAL_IMMOB_vr levdcmp potential N immobilization gN/m^3/s F
+POT_F_DENIT_vr levdcmp potential denitrification flux gN/m^3/s F
+POT_F_NIT_vr levdcmp potential nitrification flux gN/m^3/s F
+S1_PATHFRAC_S2_vr levdcmp PATHFRAC from active soil organic to slow soil organic ma fraction F
+S1_PATHFRAC_S3_vr levdcmp PATHFRAC from active soil organic to passive soil organic fraction F
+S1_RESP_FRAC_S2_vr levdcmp respired from active soil organic to slow soil organic ma fraction F
+S1_RESP_FRAC_S3_vr levdcmp respired from active soil organic to passive soil organic fraction F
+S2_PATHFRAC_S1_vr levdcmp PATHFRAC from slow soil organic ma to active soil organic fraction F
+S2_PATHFRAC_S3_vr levdcmp PATHFRAC from slow soil organic ma to passive soil organic fraction F
+S2_RESP_FRAC_S1_vr levdcmp respired from slow soil organic ma to active soil organic fraction F
+S2_RESP_FRAC_S3_vr levdcmp respired from slow soil organic ma to passive soil organic fraction F
+S3_PATHFRAC_S1_vr levdcmp PATHFRAC from passive soil organic to active soil organic fraction F
+S3_RESP_FRAC_S1_vr levdcmp respired from passive soil organic to active soil organic fraction F
+SMINN_TO_PLANT_vr levdcmp plant uptake of soil mineral N gN/m^3/s F
+SMINN_TO_S1N_L1_vr levdcmp mineral N flux for decomp. of LIT_METto SOM_ACT gN/m^3 F
+SMINN_TO_S1N_L2_vr levdcmp mineral N flux for decomp. of LIT_CELto SOM_ACT gN/m^3 F
+SMINN_TO_S1N_S2_vr levdcmp mineral N flux for decomp. of SOM_SLOto SOM_ACT gN/m^3 F
+SMINN_TO_S1N_S3_vr levdcmp mineral N flux for decomp. of SOM_PASto SOM_ACT gN/m^3 F
+SMINN_TO_S2N_L3_vr levdcmp mineral N flux for decomp. of LIT_LIGto SOM_SLO gN/m^3 F
+SMINN_TO_S2N_S1_vr levdcmp mineral N flux for decomp. of SOM_ACTto SOM_SLO gN/m^3 F
+SMINN_TO_S3N_S1_vr levdcmp mineral N flux for decomp. of SOM_ACTto SOM_PAS gN/m^3 F
+SMINN_TO_S3N_S2_vr levdcmp mineral N flux for decomp. of SOM_SLOto SOM_PAS gN/m^3 F
+SMIN_NH4_TO_PLANT levdcmp plant uptake of NH4 gN/m^3/s F
+SMIN_NO3_LEACHED_vr levdcmp soil NO3 pool loss to leaching gN/m^3/s F
+SMIN_NO3_MASSDENS levdcmp SMIN_NO3_MASSDENS ugN/cm^3 soil F
+SMIN_NO3_RUNOFF_vr levdcmp soil NO3 pool loss to runoff gN/m^3/s F
+SMIN_NO3_TO_PLANT levdcmp plant uptake of NO3 gN/m^3/s F
+SOILN_vr levdcmp SOIL N (vertically resolved) gN/m^3 T
+SOM_ACT_C_TNDNCY_VERT_TR levdcmp active soil organic C tendency due to vertical transport gC/m^3/s F
+SOM_ACT_C_TO_SOM_PAS_C_v levdcmp decomp. of active soil organic C to passive soil organic C gC/m^3/s F
+SOM_ACT_C_TO_SOM_SLO_C_v levdcmp decomp. of active soil organic C to slow soil organic ma C gC/m^3/s F
+SOM_ACT_HR_S2_vr levdcmp Het. Resp. from active soil organic gC/m^3/s F
+SOM_ACT_HR_S3_vr levdcmp Het. Resp. from active soil organic gC/m^3/s F
+SOM_ACT_N_TNDNCY_VERT_TR levdcmp active soil organic N tendency due to vertical transport gN/m^3/s F
+SOM_ACT_N_TO_SOM_PAS_N_v levdcmp decomp. of active soil organic N to passive soil organic N gN/m^3 F
+SOM_ACT_N_TO_SOM_SLO_N_v levdcmp decomp. of active soil organic N to slow soil organic ma N gN/m^3 F
+SOM_ACT_N_vr levdcmp SOM_ACT N (vertically resolved) gN/m^3 T
+SOM_ADV_COEF levdcmp advection term for vertical SOM translocation m/s F
+SOM_DIFFUS_COEF levdcmp diffusion coefficient for vertical SOM translocation m^2/s F
+SOM_PAS_C_TNDNCY_VERT_TR levdcmp passive soil organic C tendency due to vertical transport gC/m^3/s F
+SOM_PAS_C_TO_SOM_ACT_C_v levdcmp decomp. of passive soil organic C to active soil organic C gC/m^3/s F
+SOM_PAS_HR_vr levdcmp Het. Resp. from passive soil organic gC/m^3/s F
+SOM_PAS_N_TNDNCY_VERT_TR levdcmp passive soil organic N tendency due to vertical transport gN/m^3/s F
+SOM_PAS_N_TO_SOM_ACT_N_v levdcmp decomp. of passive soil organic N to active soil organic N gN/m^3 F
+SOM_PAS_N_vr levdcmp SOM_PAS N (vertically resolved) gN/m^3 T
+SOM_SLO_C_TNDNCY_VERT_TR levdcmp slow soil organic ma C tendency due to vertical transport gC/m^3/s F
+SOM_SLO_C_TO_SOM_ACT_C_v levdcmp decomp. of slow soil organic ma C to active soil organic C gC/m^3/s F
+SOM_SLO_C_TO_SOM_PAS_C_v levdcmp decomp. of slow soil organic ma C to passive soil organic C gC/m^3/s F
+SOM_SLO_HR_S1_vr levdcmp Het. Resp. from slow soil organic ma gC/m^3/s F
+SOM_SLO_HR_S3_vr levdcmp Het. Resp. from slow soil organic ma gC/m^3/s F
+SOM_SLO_N_TNDNCY_VERT_TR levdcmp slow soil organic ma N tendency due to vertical transport gN/m^3/s F
+SOM_SLO_N_TO_SOM_ACT_N_v levdcmp decomp. of slow soil organic ma N to active soil organic N gN/m^3 F
+SOM_SLO_N_TO_SOM_PAS_N_v levdcmp decomp. of slow soil organic ma N to passive soil organic N gN/m^3 F
+SOM_SLO_N_vr levdcmp SOM_SLO N (vertically resolved) gN/m^3 T
+STEM_PROF levdcmp profile for litter C and N inputs from stems 1/m F
+SUPPLEMENT_TO_SMINN_vr levdcmp supplemental N supply gN/m^3/s F
+WFPS levdcmp WFPS percent F
+anaerobic_frac levdcmp anaerobic_frac m3/m3 F
+diffus levdcmp diffusivity m^2/s F
+fr_WFPS levdcmp fr_WFPS fraction F
+n2_n2o_ratio_denit levdcmp n2_n2o_ratio_denit gN/gN F
+r_psi levdcmp r_psi m F
+ratio_k1 levdcmp ratio_k1 none F
+ratio_no3_co2 levdcmp ratio_no3_co2 ratio F
+soil_bulkdensity levdcmp soil_bulkdensity kg/m3 F
+soil_co2_prod levdcmp soil_co2_prod ug C / g soil / day F
+CONC_CH4_SAT levgrnd CH4 soil Concentration for inundated / lake area mol/m3 F
+CONC_CH4_UNSAT levgrnd CH4 soil Concentration for non-inundated area mol/m3 F
+EFF_POROSITY levgrnd effective porosity = porosity - vol_ice proportion F
+FGR_SOIL_R levgrnd Rural downward heat flux at interface below each soil layer watt/m^2 F
+FRAC_ICEOLD levgrnd fraction of ice relative to the tot water proportion F
+HK levgrnd hydraulic conductivity (natural vegetated and crop landunits only) mm/s F
+O2_DECOMP_DEPTH_UNSAT levgrnd O2 consumption from HR and AR for non-inundated area mol/m3/s F
+ROOTR levgrnd effective fraction of roots in each soil layer (SMS method) proportion F
+RRESIS levgrnd root resistance in each soil layer proportion F
+SMP levgrnd soil matric potential (natural vegetated and crop landunits only) mm T
+SOILPSI levgrnd soil water potential in each soil layer MPa F
+TSOI levgrnd soil temperature (natural vegetated and crop landunits only) K T
+TSOI_ICE levgrnd soil temperature (ice landunits only) K T
+bsw levgrnd clap and hornberger B unitless F
+watfc levgrnd water field capacity m^3/m^3 F
+watsat levgrnd water saturated m^3/m^3 F
+LAKEICEFRAC levlak lake layer ice mass fraction unitless F
+TLAKE levlak lake temperature K T
+SNO_ABS levsno Absorbed solar radiation in each snow layer W/m^2 F
+SNO_ABS_ICE levsno Absorbed solar radiation in each snow layer (ice landunits only) W/m^2 F
+SNO_BW levsno Partial density of water in the snow pack (ice + liquid) kg/m3 F
+SNO_BW_ICE levsno Partial density of water in the snow pack (ice + liquid, ice landunits only) kg/m3 F
+SNO_EXISTENCE levsno Fraction of averaging period for which each snow layer existed unitless F
+SNO_FRZ levsno snow freezing rate in each snow layer kg/m2/s F
+SNO_FRZ_ICE levsno snow freezing rate in each snow layer (ice landunits only) mm/s F
+SNO_GS levsno Mean snow grain size Microns F
+SNO_GS_ICE levsno Mean snow grain size (ice landunits only) Microns F
+SNO_ICE levsno Snow ice content kg/m2 F
+SNO_LIQH2O levsno Snow liquid water content kg/m2 F
+SNO_MELT levsno snow melt rate in each snow layer mm/s F
+SNO_MELT_ICE levsno snow melt rate in each snow layer (ice landunits only) mm/s F
+SNO_T levsno Snow temperatures K F
+SNO_TK levsno Thermal conductivity W/m-K F
+SNO_TK_ICE levsno Thermal conductivity (ice landunits only) W/m-K F
+SNO_T_ICE levsno Snow temperatures (ice landunits only) K F
+SNO_Z levsno Snow layer thicknesses m F
+SNO_Z_ICE levsno Snow layer thicknesses (ice landunits only) m F
+CONC_O2_SAT levsoi O2 soil Concentration for inundated / lake area mol/m3 T
+CONC_O2_UNSAT levsoi O2 soil Concentration for non-inundated area mol/m3 T
+CWD_C_vr levsoi CWD C (vertically resolved) gC/m^3 T
+H2OSOI levsoi volumetric soil water (natural vegetated and crop landunits only) mm3/mm3 T
+HR_vr levsoi total vertically resolved heterotrophic respiration gC/m^3/s T
+KROOT levsoi root conductance each soil layer 1/s F
+KSOIL levsoi soil conductance in each soil layer 1/s F
+LIT_CEL_C_vr levsoi LIT_CEL C (vertically resolved) gC/m^3 T
+LIT_LIG_C_vr levsoi LIT_LIG C (vertically resolved) gC/m^3 T
+LIT_MET_C_vr levsoi LIT_MET C (vertically resolved) gC/m^3 T
+O_SCALAR levsoi fraction by which decomposition is reduced due to anoxia unitless T
+QROOTSINK levsoi water flux from soil to root in each soil-layer mm/s F
+SMINN_vr levsoi soil mineral N gN/m^3 T
+SMIN_NH4_vr levsoi soil mineral NH4 (vert. res.) gN/m^3 T
+SMIN_NO3_vr levsoi soil mineral NO3 (vert. res.) gN/m^3 T
+SOILC_vr levsoi SOIL C (vertically resolved) gC/m^3 T
+SOILICE levsoi soil ice (natural vegetated and crop landunits only) kg/m2 T
+SOILLIQ levsoi soil liquid water (natural vegetated and crop landunits only) kg/m2 T
+SOM_ACT_C_vr levsoi SOM_ACT C (vertically resolved) gC/m^3 T
+SOM_PAS_C_vr levsoi SOM_PAS C (vertically resolved) gC/m^3 T
+SOM_SLO_C_vr levsoi SOM_SLO C (vertically resolved) gC/m^3 T
+T_SCALAR levsoi temperature inhibition of decomposition unitless T
+W_SCALAR levsoi Moisture (dryness) inhibition of decomposition unitless T
+GDDACCUM_PERHARV mxharvests At-harvest accumulated growing degree days past planting date for crop; should only be output ddays F
+GDDHARV_PERHARV mxharvests Growing degree days (gdd) needed to harvest; should only be output annually ddays F
+GRAINC_TO_FOOD_PERHARV mxharvests grain C to food per harvest; should only be output annually gC/m^2 F
+HARVEST_REASON_PERHARV mxharvests Reason for each crop harvest; should only be output annually 1 = mature; 2 = max season length; 3 = incorrect Dec. 31 sowing; F
+HDATES mxharvests actual crop harvest dates; should only be output annually day of year F
+HUI_PERHARV mxharvests At-harvest accumulated heat unit index for crop; should only be output annually ddays F
+SDATES_PERHARV mxharvests actual sowing dates for crops harvested this year; should only be output annually day of year F
+SOWING_REASON_PERHARV mxharvests Reason for sowing of each crop harvested this year; should only be output annually unitless F
+SYEARS_PERHARV mxharvests actual sowing years for crops harvested this year; should only be output annually year F
+SDATES mxsowings actual crop sowing dates; should only be output annually day of year F
+SOWING_REASON mxsowings Reason for each crop sowing; should only be output annually unitless F
+ALBD numrad surface albedo (direct) proportion F
+ALBGRD numrad ground albedo (direct) proportion F
+ALBGRI numrad ground albedo (indirect) proportion F
+ALBI numrad surface albedo (indirect) proportion F
+VEGWP nvegwcs vegetation water matric potential for sun/sha canopy,xyl,root segments mm T
+VEGWPLN nvegwcs vegetation water matric potential for sun/sha canopy,xyl,root at local noon mm T
+VEGWPPD nvegwcs predawn vegetation water matric potential for sun/sha canopy,xyl,root mm T
+=================================== ================ ============================================================================================== ================================================================= =======
diff --git a/doc/source/users_guide/setting-up-and-running-a-case/index.rst b/doc/source/users_guide/setting-up-and-running-a-case/index.rst
index f882df277b..b11587ee21 100644
--- a/doc/source/users_guide/setting-up-and-running-a-case/index.rst
+++ b/doc/source/users_guide/setting-up-and-running-a-case/index.rst
@@ -18,6 +18,6 @@ Setting Up and Running a Case
customizing-the-clm-configuration.rst
customizing-the-clm-namelist.rst
customizing-the-datm-namelist.rst
- master_list_nofates
- master_list_fates
+ history_fields_nofates
+ history_fields_fates
diff --git a/doc/source/users_guide/setting-up-and-running-a-case/master_list_fates.rst b/doc/source/users_guide/setting-up-and-running-a-case/master_list_fates.rst
deleted file mode 100644
index 57edbfd3ca..0000000000
--- a/doc/source/users_guide/setting-up-and-running-a-case/master_list_fates.rst
+++ /dev/null
@@ -1,955 +0,0 @@
-=============================
-CTSM History Fields (fates)
-=============================
-
-CAUTION: Not all variables are relevant / present for all CTSM cases.
-Key flags used in this CTSM case:
-use_cn = F
-use_crop = F
-use_fates = T
-
-==== =================================== ============================================================================================== ================================================================= =======
-CTSM History Fields
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
- # Variable Name Long Description Units Active?
-==== =================================== ============================================================================================== ================================================================= =======
- 1 A5TMIN 5-day running mean of min 2-m temperature K F
- 2 ACTUAL_IMMOB actual N immobilization gN/m^2/s T
- 3 ACT_SOMC ACT_SOM C gC/m^2 T
- 4 ACT_SOMC_1m ACT_SOM C to 1 meter gC/m^2 F
- 5 ACT_SOMC_TNDNCY_VERT_TRA active soil organic C tendency due to vertical transport gC/m^3/s F
- 6 ACT_SOMC_TO_PAS_SOMC decomp. of active soil organic C to passive soil organic C gC/m^2/s F
- 7 ACT_SOMC_TO_PAS_SOMC_vr decomp. of active soil organic C to passive soil organic C gC/m^3/s F
- 8 ACT_SOMC_TO_SLO_SOMC decomp. of active soil organic C to slow soil organic ma C gC/m^2/s F
- 9 ACT_SOMC_TO_SLO_SOMC_vr decomp. of active soil organic C to slow soil organic ma C gC/m^3/s F
- 10 ACT_SOMC_vr ACT_SOM C (vertically resolved) gC/m^3 T
- 11 ACT_SOMN ACT_SOM N gN/m^2 T
- 12 ACT_SOMN_1m ACT_SOM N to 1 meter gN/m^2 F
- 13 ACT_SOMN_TNDNCY_VERT_TRA active soil organic N tendency due to vertical transport gN/m^3/s F
- 14 ACT_SOMN_TO_PAS_SOMN decomp. of active soil organic N to passive soil organic N gN/m^2 F
- 15 ACT_SOMN_TO_PAS_SOMN_vr decomp. of active soil organic N to passive soil organic N gN/m^3 F
- 16 ACT_SOMN_TO_SLO_SOMN decomp. of active soil organic N to slow soil organic ma N gN/m^2 F
- 17 ACT_SOMN_TO_SLO_SOMN_vr decomp. of active soil organic N to slow soil organic ma N gN/m^3 F
- 18 ACT_SOMN_vr ACT_SOM N (vertically resolved) gN/m^3 T
- 19 ACT_SOM_HR_S2 Het. Resp. from active soil organic gC/m^2/s F
- 20 ACT_SOM_HR_S2_vr Het. Resp. from active soil organic gC/m^3/s F
- 21 ACT_SOM_HR_S3 Het. Resp. from active soil organic gC/m^2/s F
- 22 ACT_SOM_HR_S3_vr Het. Resp. from active soil organic gC/m^3/s F
- 23 AGB Aboveground biomass gC m-2 T
- 24 AGB_SCLS Aboveground biomass by size class kgC/m2 T
- 25 AGB_SCPF Aboveground biomass by pft/size kgC/m2 F
- 26 AGLB Aboveground leaf biomass kg/m^2 F
- 27 AGSB Aboveground stem biomass kg/m^2 F
- 28 ALBD surface albedo (direct) proportion F
- 29 ALBGRD ground albedo (direct) proportion F
- 30 ALBGRI ground albedo (indirect) proportion F
- 31 ALBI surface albedo (indirect) proportion F
- 32 ALT current active layer thickness m F
- 33 ALTMAX maximum annual active layer thickness m F
- 34 ALTMAX_LASTYEAR maximum prior year active layer thickness m F
- 35 AR autotrophic respiration gC/m^2/s T
- 36 AREA_BURNT_BY_PATCH_AGE spitfire area burnt by patch age (divide by patch_area_by_age to get burnt fraction by age) m2/m2/day T
- 37 AREA_PLANT area occupied by all plants m2/m2 T
- 38 AREA_TREES area occupied by woody plants m2/m2 T
- 39 AR_AGSAPM_SCPF above-ground sapwood maintenance autotrophic respiration per m2 per year by pft/size kgC/m2/yr F
- 40 AR_CANOPY autotrophic respiration of canopy plants gC/m^2/s T
- 41 AR_CANOPY_SCPF autotrophic respiration of canopy plants by pft/size kgC/m2/yr F
- 42 AR_CROOTM_SCPF below-ground sapwood maintenance autotrophic respiration per m2 per year by pft/size kgC/m2/yr F
- 43 AR_DARKM_SCPF dark portion of maintenance autotrophic respiration per m2 per year by pft/size kgC/m2/yr F
- 44 AR_FROOTM_SCPF fine root maintenance autotrophic respiration per m2 per year by pft/size kgC/m2/yr F
- 45 AR_GROW_SCPF growth autotrophic respiration per m2 per year by pft/size kgC/m2/yr F
- 46 AR_MAINT_SCPF maintenance autotrophic respiration per m2 per year by pft/size kgC/m2/yr F
- 47 AR_SCPF total autotrophic respiration per m2 per year by pft/size kgC/m2/yr F
- 48 AR_UNDERSTORY autotrophic respiration of understory plants gC/m^2/s T
- 49 AR_UNDERSTORY_SCPF autotrophic respiration of understory plants by pft/size kgC/m2/yr F
- 50 ATM_TOPO atmospheric surface height m T
- 51 AnnET Annual ET mm/s F
- 52 BA_SCLS basal area by size class m2/ha T
- 53 BA_SCPF basal area by pft/size m2/ha F
- 54 BCDEP total BC deposition (dry+wet) from atmosphere kg/m^2/s T
- 55 BDEAD_MD_CANOPY_SCLS BDEAD_MD for canopy plants by size class kg C / ha / yr F
- 56 BDEAD_MD_UNDERSTORY_SCLS BDEAD_MD for understory plants by size class kg C / ha / yr F
- 57 BIOMASS_AGEPFT biomass per PFT in each age bin kg C / m2 F
- 58 BIOMASS_BY_AGE Total Biomass within a given patch age bin kgC/m2 F
- 59 BIOMASS_CANOPY Biomass of canopy plants gC m-2 T
- 60 BIOMASS_SCLS Total biomass by size class kgC/m2 F
- 61 BIOMASS_UNDERSTORY Biomass of understory plants gC m-2 T
- 62 BLEAF_CANOPY_SCPF biomass carbon in leaf of canopy plants by pft/size kgC/ha F
- 63 BLEAF_UNDERSTORY_SCPF biomass carbon in leaf of understory plants by pft/size kgC/ha F
- 64 BSTORE_MD_CANOPY_SCLS BSTORE_MD for canopy plants by size class kg C / ha / yr F
- 65 BSTORE_MD_UNDERSTORY_SCLS BSTORE_MD for understory plants by size class kg C / ha / yr F
- 66 BSTOR_CANOPY_SCPF biomass carbon in storage pools of canopy plants by pft/size kgC/ha F
- 67 BSTOR_UNDERSTORY_SCPF biomass carbon in storage pools of understory plants by pft/size kgC/ha F
- 68 BSW_MD_CANOPY_SCLS BSW_MD for canopy plants by size class kg C / ha / yr F
- 69 BSW_MD_UNDERSTORY_SCLS BSW_MD for understory plants by size class kg C / ha / yr F
- 70 BTRAN transpiration beta factor unitless T
- 71 BTRANMN daily minimum of transpiration beta factor unitless T
- 72 BURNT_LITTER_FRAC_AREA_PRODUCT product of fraction of fuel burnt and burned area (divide by FIRE_AREA to get burned-area-weig fraction T
- 73 C13disc_SCPF C13 discrimination by pft/size per mil F
- 74 CAMBIALFIREMORT_SCPF cambial fire mortality by pft/size N/ha/yr F
- 75 CANOPY_AREA_BY_AGE canopy area by age bin m2/m2 T
- 76 CANOPY_HEIGHT_DIST canopy height distribution m2/m2 T
- 77 CANOPY_SPREAD Scaling factor between tree basal area and canopy area 0-1 T
- 78 CARBON_BALANCE_CANOPY_SCLS CARBON_BALANCE for canopy plants by size class kg C / ha / yr F
- 79 CARBON_BALANCE_UNDERSTORY_SCLS CARBON_BALANCE for understory plants by size class kg C / ha / yr F
- 80 CBALANCE_ERROR_FATES total carbon error, FATES mgC/day T
- 81 CEFFLUX carbon efflux, root to soil kgC/ha/day T
- 82 CEFFLUX_SCPF carbon efflux, root to soil, by size-class x pft kg/ha/day F
- 83 CEL_LITC CEL_LIT C gC/m^2 T
- 84 CEL_LITC_1m CEL_LIT C to 1 meter gC/m^2 F
- 85 CEL_LITC_TNDNCY_VERT_TRA cellulosic litter C tendency due to vertical transport gC/m^3/s F
- 86 CEL_LITC_TO_ACT_SOMC decomp. of cellulosic litter C to active soil organic C gC/m^2/s F
- 87 CEL_LITC_TO_ACT_SOMC_vr decomp. of cellulosic litter C to active soil organic C gC/m^3/s F
- 88 CEL_LITC_vr CEL_LIT C (vertically resolved) gC/m^3 T
- 89 CEL_LITN CEL_LIT N gN/m^2 T
- 90 CEL_LITN_1m CEL_LIT N to 1 meter gN/m^2 F
- 91 CEL_LITN_TNDNCY_VERT_TRA cellulosic litter N tendency due to vertical transport gN/m^3/s F
- 92 CEL_LITN_TO_ACT_SOMN decomp. of cellulosic litter N to active soil organic N gN/m^2 F
- 93 CEL_LITN_TO_ACT_SOMN_vr decomp. of cellulosic litter N to active soil organic N gN/m^3 F
- 94 CEL_LITN_vr CEL_LIT N (vertically resolved) gN/m^3 T
- 95 CEL_LIT_HR Het. Resp. from cellulosic litter gC/m^2/s F
- 96 CEL_LIT_HR_vr Het. Resp. from cellulosic litter gC/m^3/s F
- 97 CH4PROD Gridcell total production of CH4 gC/m2/s T
- 98 CH4_EBUL_TOTAL_SAT ebullition surface CH4 flux; (+ to atm) mol/m2/s F
- 99 CH4_EBUL_TOTAL_UNSAT ebullition surface CH4 flux; (+ to atm) mol/m2/s F
- 100 CH4_SURF_AERE_SAT aerenchyma surface CH4 flux for inundated area; (+ to atm) mol/m2/s T
- 101 CH4_SURF_AERE_UNSAT aerenchyma surface CH4 flux for non-inundated area; (+ to atm) mol/m2/s T
- 102 CH4_SURF_DIFF_SAT diffusive surface CH4 flux for inundated / lake area; (+ to atm) mol/m2/s T
- 103 CH4_SURF_DIFF_UNSAT diffusive surface CH4 flux for non-inundated area; (+ to atm) mol/m2/s T
- 104 CH4_SURF_EBUL_SAT ebullition surface CH4 flux for inundated / lake area; (+ to atm) mol/m2/s T
- 105 CH4_SURF_EBUL_UNSAT ebullition surface CH4 flux for non-inundated area; (+ to atm) mol/m2/s T
- 106 COL_CTRUNC column-level sink for C truncation gC/m^2 F
- 107 COL_NTRUNC column-level sink for N truncation gN/m^2 F
- 108 CONC_CH4_SAT CH4 soil Concentration for inundated / lake area mol/m3 F
- 109 CONC_CH4_UNSAT CH4 soil Concentration for non-inundated area mol/m3 F
- 110 CONC_O2_SAT O2 soil Concentration for inundated / lake area mol/m3 T
- 111 CONC_O2_UNSAT O2 soil Concentration for non-inundated area mol/m3 T
- 112 COSZEN cosine of solar zenith angle none F
- 113 CROWNAREA_CAN total crown area in each canopy layer m2/m2 T
- 114 CROWNAREA_CNLF total crown area that is occupied by leaves in each canopy and leaf layer m2/m2 F
- 115 CROWNFIREMORT_SCPF crown fire mortality by pft/size N/ha/yr F
- 116 CROWN_AREA_CANOPY_SCLS total crown area of canopy plants by size class m2/ha F
- 117 CROWN_AREA_UNDERSTORY_SCLS total crown area of understory plants by size class m2/ha F
- 118 CWDC_HR cwd C heterotrophic respiration gC/m^2/s F
- 119 CWD_AG_CWDSC size-resolved AG CWD stocks gC/m^2 F
- 120 CWD_AG_IN_CWDSC size-resolved AG CWD input gC/m^2/y F
- 121 CWD_AG_OUT_CWDSC size-resolved AG CWD output gC/m^2/y F
- 122 CWD_BG_CWDSC size-resolved BG CWD stocks gC/m^2 F
- 123 CWD_BG_IN_CWDSC size-resolved BG CWD input gC/m^2/y F
- 124 CWD_BG_OUT_CWDSC size-resolved BG CWD output gC/m^2/y F
- 125 C_LBLAYER mean leaf boundary layer conductance umol m-2 s-1 T
- 126 C_LBLAYER_BY_AGE mean leaf boundary layer conductance - by patch age umol m-2 s-1 F
- 127 C_STOMATA mean stomatal conductance umol m-2 s-1 T
- 128 C_STOMATA_BY_AGE mean stomatal conductance - by patch age umol m-2 s-1 F
- 129 DDBH_CANOPY_SCAG growth rate of canopy plantsnumber of plants per hectare in canopy in each size x age class cm/yr/ha F
- 130 DDBH_CANOPY_SCLS diameter growth increment by pft/size cm/yr/ha T
- 131 DDBH_CANOPY_SCPF diameter growth increment by pft/size cm/yr/ha F
- 132 DDBH_SCPF diameter growth increment by pft/size cm/yr/ha F
- 133 DDBH_UNDERSTORY_SCAG growth rate of understory plants in each size x age class cm/yr/ha F
- 134 DDBH_UNDERSTORY_SCLS diameter growth increment by pft/size cm/yr/ha T
- 135 DDBH_UNDERSTORY_SCPF diameter growth increment by pft/size cm/yr/ha F
- 136 DEMOTION_CARBONFLUX demotion-associated biomass carbon flux from canopy to understory gC/m2/s T
- 137 DEMOTION_RATE_SCLS demotion rate from canopy to understory by size class indiv/ha/yr F
- 138 DENIT total rate of denitrification gN/m^2/s T
- 139 DGNETDT derivative of net ground heat flux wrt soil temp W/m^2/K F
- 140 DISPLA displacement height m F
- 141 DISTURBANCE_RATE_FIRE Disturbance rate from fire m2 m-2 d-1 T
- 142 DISTURBANCE_RATE_LOGGING Disturbance rate from logging m2 m-2 d-1 T
- 143 DISTURBANCE_RATE_P2P Disturbance rate from primary to primary lands m2 m-2 d-1 T
- 144 DISTURBANCE_RATE_P2S Disturbance rate from primary to secondary lands m2 m-2 d-1 T
- 145 DISTURBANCE_RATE_POTENTIAL Potential (i.e., including unresolved) disturbance rate m2 m-2 d-1 T
- 146 DISTURBANCE_RATE_S2S Disturbance rate from secondary to secondary lands m2 m-2 d-1 T
- 147 DISTURBANCE_RATE_TREEFALL Disturbance rate from treefall m2 m-2 d-1 T
- 148 DPVLTRB1 turbulent deposition velocity 1 m/s F
- 149 DPVLTRB2 turbulent deposition velocity 2 m/s F
- 150 DPVLTRB3 turbulent deposition velocity 3 m/s F
- 151 DPVLTRB4 turbulent deposition velocity 4 m/s F
- 152 DSL dry surface layer thickness mm T
- 153 DSTDEP total dust deposition (dry+wet) from atmosphere kg/m^2/s T
- 154 DSTFLXT total surface dust emission kg/m2/s T
- 155 DYN_COL_ADJUSTMENTS_CH4 Adjustments in ch4 due to dynamic column areas; only makes sense at the column level: should n gC/m^2 F
- 156 DYN_COL_SOIL_ADJUSTMENTS_C Adjustments in soil carbon due to dynamic column areas; only makes sense at the column level: gC/m^2 F
- 157 DYN_COL_SOIL_ADJUSTMENTS_N Adjustments in soil nitrogen due to dynamic column areas; only makes sense at the column level gN/m^2 F
- 158 ED_NCOHORTS Total number of ED cohorts per site none T
- 159 ED_NPATCHES Total number of ED patches per site none T
- 160 ED_balive Live biomass gC m-2 T
- 161 ED_bdead Dead (structural) biomass (live trees, not CWD) gC m-2 T
- 162 ED_bfineroot Fine root biomass gC m-2 T
- 163 ED_biomass Total biomass gC m-2 T
- 164 ED_bleaf Leaf biomass gC m-2 T
- 165 ED_bsapwood Sapwood biomass gC m-2 T
- 166 ED_bstore Storage biomass gC m-2 T
- 167 EFFECT_WSPEED effective windspeed for fire spread none T
- 168 EFLXBUILD building heat flux from change in interior building air temperature W/m^2 T
- 169 EFLX_DYNBAL dynamic land cover change conversion energy flux W/m^2 T
- 170 EFLX_GNET net heat flux into ground W/m^2 F
- 171 EFLX_GRND_LAKE net heat flux into lake/snow surface, excluding light transmission W/m^2 T
- 172 EFLX_LH_TOT total latent heat flux [+ to atm] W/m^2 T
- 173 EFLX_LH_TOT_ICE total latent heat flux [+ to atm] (ice landunits only) W/m^2 F
- 174 EFLX_LH_TOT_R Rural total evaporation W/m^2 T
- 175 EFLX_LH_TOT_U Urban total evaporation W/m^2 F
- 176 EFLX_SOIL_GRND soil heat flux [+ into soil] W/m^2 F
- 177 ELAI exposed one-sided leaf area index m^2/m^2 T
- 178 ERRH2O total water conservation error mm T
- 179 ERRH2OSNO imbalance in snow depth (liquid water) mm T
- 180 ERROR_FATES total error, FATES mass-balance mg/day T
- 181 ERRSEB surface energy conservation error W/m^2 T
- 182 ERRSOI soil/lake energy conservation error W/m^2 T
- 183 ERRSOL solar radiation conservation error W/m^2 T
- 184 ESAI exposed one-sided stem area index m^2/m^2 T
- 185 FABD_SHA_CNLF shade fraction of direct light absorbed by each canopy and leaf layer fraction F
- 186 FABD_SHA_CNLFPFT shade fraction of direct light absorbed by each canopy, leaf, and PFT fraction F
- 187 FABD_SHA_TOPLF_BYCANLAYER shade fraction of direct light absorbed by the top leaf layer of each canopy layer fraction F
- 188 FABD_SUN_CNLF sun fraction of direct light absorbed by each canopy and leaf layer fraction F
- 189 FABD_SUN_CNLFPFT sun fraction of direct light absorbed by each canopy, leaf, and PFT fraction F
- 190 FABD_SUN_TOPLF_BYCANLAYER sun fraction of direct light absorbed by the top leaf layer of each canopy layer fraction F
- 191 FABI_SHA_CNLF shade fraction of indirect light absorbed by each canopy and leaf layer fraction F
- 192 FABI_SHA_CNLFPFT shade fraction of indirect light absorbed by each canopy, leaf, and PFT fraction F
- 193 FABI_SHA_TOPLF_BYCANLAYER shade fraction of indirect light absorbed by the top leaf layer of each canopy layer fraction F
- 194 FABI_SUN_CNLF sun fraction of indirect light absorbed by each canopy and leaf layer fraction F
- 195 FABI_SUN_CNLFPFT sun fraction of indirect light absorbed by each canopy, leaf, and PFT fraction F
- 196 FABI_SUN_TOPLF_BYCANLAYER sun fraction of indirect light absorbed by the top leaf layer of each canopy layer fraction F
- 197 FATES_HR heterotrophic respiration gC/m^2/s T
- 198 FATES_c_to_litr_cel_c litter celluluse carbon flux from FATES to BGC gC/m^3/s T
- 199 FATES_c_to_litr_lab_c litter labile carbon flux from FATES to BGC gC/m^3/s T
- 200 FATES_c_to_litr_lig_c litter lignin carbon flux from FATES to BGC gC/m^3/s T
- 201 FCEV canopy evaporation W/m^2 T
- 202 FCH4 Gridcell surface CH4 flux to atmosphere (+ to atm) kgC/m2/s T
- 203 FCH4TOCO2 Gridcell oxidation of CH4 to CO2 gC/m2/s T
- 204 FCH4_DFSAT CH4 additional flux due to changing fsat, natural vegetated and crop landunits only kgC/m2/s T
- 205 FCO2 CO2 flux to atmosphere (+ to atm) kgCO2/m2/s F
- 206 FCOV fractional impermeable area unitless T
- 207 FCTR canopy transpiration W/m^2 T
- 208 FGEV ground evaporation W/m^2 T
- 209 FGR heat flux into soil/snow including snow melt and lake / snow light transmission W/m^2 T
- 210 FGR12 heat flux between soil layers 1 and 2 W/m^2 T
- 211 FGR_ICE heat flux into soil/snow including snow melt and lake / snow light transmission (ice landunits W/m^2 F
- 212 FGR_R Rural heat flux into soil/snow including snow melt and snow light transmission W/m^2 F
- 213 FGR_SOIL_R Rural downward heat flux at interface below each soil layer watt/m^2 F
- 214 FGR_U Urban heat flux into soil/snow including snow melt W/m^2 F
- 215 FH2OSFC fraction of ground covered by surface water unitless T
- 216 FH2OSFC_NOSNOW fraction of ground covered by surface water (if no snow present) unitless F
- 217 FINUNDATED fractional inundated area of vegetated columns unitless T
- 218 FINUNDATED_LAG time-lagged inundated fraction of vegetated columns unitless F
- 219 FIRA net infrared (longwave) radiation W/m^2 T
- 220 FIRA_ICE net infrared (longwave) radiation (ice landunits only) W/m^2 F
- 221 FIRA_R Rural net infrared (longwave) radiation W/m^2 T
- 222 FIRA_U Urban net infrared (longwave) radiation W/m^2 F
- 223 FIRE emitted infrared (longwave) radiation W/m^2 T
- 224 FIRE_AREA spitfire fire area burn fraction fraction/day T
- 225 FIRE_FDI probability that an ignition will lead to a fire none T
- 226 FIRE_FLUX ED-spitfire loss to atmosphere of elements g/m^2/s T
- 227 FIRE_FUEL_BULKD spitfire fuel bulk density kg biomass/m3 T
- 228 FIRE_FUEL_EFF_MOIST spitfire fuel moisture m T
- 229 FIRE_FUEL_MEF spitfire fuel moisture m T
- 230 FIRE_FUEL_SAV spitfire fuel surface/volume per m T
- 231 FIRE_ICE emitted infrared (longwave) radiation (ice landunits only) W/m^2 F
- 232 FIRE_IGNITIONS number of successful ignitions number/km2/day T
- 233 FIRE_INTENSITY spitfire fire intensity: kJ/m/s kJ/m/s T
- 234 FIRE_INTENSITY_AREA_PRODUCT spitfire product of fire intensity and burned area (divide by FIRE_AREA to get area-weighted m kJ/m/s T
- 235 FIRE_INTENSITY_BY_PATCH_AGE product of fire intensity and burned area, resolved by patch age (so divide by AREA_BURNT_BY_P kJ/m/2 T
- 236 FIRE_NESTEROV_INDEX nesterov_fire_danger index none T
- 237 FIRE_R Rural emitted infrared (longwave) radiation W/m^2 T
- 238 FIRE_ROS fire rate of spread m/min m/min T
- 239 FIRE_ROS_AREA_PRODUCT product of fire rate of spread (m/min) and burned area (fraction)--divide by FIRE_AREA to get m/min T
- 240 FIRE_TFC_ROS total fuel consumed kgC/m2 T
- 241 FIRE_TFC_ROS_AREA_PRODUCT product of total fuel consumed and burned area--divide by FIRE_AREA to get burned-area-weighte kgC/m2 T
- 242 FIRE_U Urban emitted infrared (longwave) radiation W/m^2 F
- 243 FLDS atmospheric longwave radiation (downscaled to columns in glacier regions) W/m^2 T
- 244 FLDS_ICE atmospheric longwave radiation (downscaled to columns in glacier regions) (ice landunits only) W/m^2 F
- 245 FNRTC Total carbon in live plant fine-roots kgC ha-1 T
- 246 FNRTC_SCPF fine-root carbon mass by size-class x pft kgC/ha F
- 247 FRAGMENTATION_SCALER_SL factor by which litter/cwd fragmentation proceeds relative to max rate by soil layer unitless (0-1) T
- 248 FROOT_MR fine root maintenance respiration) kg C / m2 / yr T
- 249 FROOT_MR_CANOPY_SCLS FROOT_MR for canopy plants by size class kg C / ha / yr F
- 250 FROOT_MR_UNDERSTORY_SCLS FROOT_MR for understory plants by size class kg C / ha / yr F
- 251 FROST_TABLE frost table depth (natural vegetated and crop landunits only) m F
- 252 FSA absorbed solar radiation W/m^2 T
- 253 FSAT fractional area with water table at surface unitless T
- 254 FSA_ICE absorbed solar radiation (ice landunits only) W/m^2 F
- 255 FSA_R Rural absorbed solar radiation W/m^2 F
- 256 FSA_U Urban absorbed solar radiation W/m^2 F
- 257 FSD24 direct radiation (last 24hrs) K F
- 258 FSD240 direct radiation (last 240hrs) K F
- 259 FSDS atmospheric incident solar radiation W/m^2 T
- 260 FSDSND direct nir incident solar radiation W/m^2 T
- 261 FSDSNDLN direct nir incident solar radiation at local noon W/m^2 T
- 262 FSDSNI diffuse nir incident solar radiation W/m^2 T
- 263 FSDSVD direct vis incident solar radiation W/m^2 T
- 264 FSDSVDLN direct vis incident solar radiation at local noon W/m^2 T
- 265 FSDSVI diffuse vis incident solar radiation W/m^2 T
- 266 FSDSVILN diffuse vis incident solar radiation at local noon W/m^2 T
- 267 FSH sensible heat not including correction for land use change and rain/snow conversion W/m^2 T
- 268 FSH_G sensible heat from ground W/m^2 T
- 269 FSH_ICE sensible heat not including correction for land use change and rain/snow conversion (ice landu W/m^2 F
- 270 FSH_PRECIP_CONVERSION Sensible heat flux from conversion of rain/snow atm forcing W/m^2 T
- 271 FSH_R Rural sensible heat W/m^2 T
- 272 FSH_RUNOFF_ICE_TO_LIQ sensible heat flux generated from conversion of ice runoff to liquid W/m^2 T
- 273 FSH_TO_COUPLER sensible heat sent to coupler (includes corrections for land use change, rain/snow conversion W/m^2 T
- 274 FSH_U Urban sensible heat W/m^2 F
- 275 FSH_V sensible heat from veg W/m^2 T
- 276 FSI24 indirect radiation (last 24hrs) K F
- 277 FSI240 indirect radiation (last 240hrs) K F
- 278 FSM snow melt heat flux W/m^2 T
- 279 FSM_ICE snow melt heat flux (ice landunits only) W/m^2 F
- 280 FSM_R Rural snow melt heat flux W/m^2 F
- 281 FSM_U Urban snow melt heat flux W/m^2 F
- 282 FSNO fraction of ground covered by snow unitless T
- 283 FSNO_EFF effective fraction of ground covered by snow unitless T
- 284 FSNO_ICE fraction of ground covered by snow (ice landunits only) unitless F
- 285 FSR reflected solar radiation W/m^2 T
- 286 FSRND direct nir reflected solar radiation W/m^2 T
- 287 FSRNDLN direct nir reflected solar radiation at local noon W/m^2 T
- 288 FSRNI diffuse nir reflected solar radiation W/m^2 T
- 289 FSRVD direct vis reflected solar radiation W/m^2 T
- 290 FSRVDLN direct vis reflected solar radiation at local noon W/m^2 T
- 291 FSRVI diffuse vis reflected solar radiation W/m^2 T
- 292 FSR_ICE reflected solar radiation (ice landunits only) W/m^2 F
- 293 FSUN sunlit fraction of canopy proportion F
- 294 FSUN24 fraction sunlit (last 24hrs) K F
- 295 FSUN240 fraction sunlit (last 240hrs) K F
- 296 FUEL_AMOUNT_AGEFUEL spitfire fuel quantity in each age x fuel class kg C / m2 T
- 297 FUEL_AMOUNT_BY_NFSC spitfire size-resolved fuel quantity kg C / m2 T
- 298 FUEL_MOISTURE_NFSC spitfire size-resolved fuel moisture - T
- 299 Fire_Closs ED/SPitfire Carbon loss to atmosphere gC/m^2/s T
- 300 GPP gross primary production gC/m^2/s T
- 301 GPP_BY_AGE gross primary productivity by age bin gC/m^2/s F
- 302 GPP_CANOPY gross primary production of canopy plants gC/m^2/s T
- 303 GPP_CANOPY_SCPF gross primary production of canopy plants by pft/size kgC/m2/yr F
- 304 GPP_SCPF gross primary production by pft/size kgC/m2/yr F
- 305 GPP_UNDERSTORY gross primary production of understory plants gC/m^2/s T
- 306 GPP_UNDERSTORY_SCPF gross primary production of understory plants by pft/size kgC/m2/yr F
- 307 GROSS_NMIN gross rate of N mineralization gN/m^2/s T
- 308 GROWTHFLUX_FUSION_SCPF flux of individuals into a given size class bin via fusion n/yr/ha F
- 309 GROWTHFLUX_SCPF flux of individuals into a given size class bin via growth and recruitment n/yr/ha F
- 310 GROWTH_RESP growth respiration gC/m^2/s T
- 311 GSSHA shaded leaf stomatal conductance umol H20/m2/s T
- 312 GSSHALN shaded leaf stomatal conductance at local noon umol H20/m2/s T
- 313 GSSUN sunlit leaf stomatal conductance umol H20/m2/s T
- 314 GSSUNLN sunlit leaf stomatal conductance at local noon umol H20/m2/s T
- 315 H2OCAN intercepted water mm T
- 316 H2OSFC surface water depth mm T
- 317 H2OSNO snow depth (liquid water) mm T
- 318 H2OSNO_ICE snow depth (liquid water, ice landunits only) mm F
- 319 H2OSNO_TOP mass of snow in top snow layer kg/m2 T
- 320 H2OSOI volumetric soil water (natural vegetated and crop landunits only) mm3/mm3 T
- 321 HARVEST_CARBON_FLUX Harvest carbon flux kg C m-2 d-1 T
- 322 HBOT canopy bottom m F
- 323 HEAT_CONTENT1 initial gridcell total heat content J/m^2 T
- 324 HEAT_CONTENT1_VEG initial gridcell total heat content - natural vegetated and crop landunits only J/m^2 F
- 325 HEAT_CONTENT2 post land cover change total heat content J/m^2 F
- 326 HEAT_FROM_AC sensible heat flux put into canyon due to heat removed from air conditioning W/m^2 T
- 327 HIA 2 m NWS Heat Index C T
- 328 HIA_R Rural 2 m NWS Heat Index C T
- 329 HIA_U Urban 2 m NWS Heat Index C T
- 330 HK hydraulic conductivity (natural vegetated and crop landunits only) mm/s F
- 331 HR total heterotrophic respiration gC/m^2/s T
- 332 HR_vr total vertically resolved heterotrophic respiration gC/m^3/s T
- 333 HTOP canopy top m T
- 334 HUMIDEX 2 m Humidex C T
- 335 HUMIDEX_R Rural 2 m Humidex C T
- 336 HUMIDEX_U Urban 2 m Humidex C T
- 337 ICE_CONTENT1 initial gridcell total ice content mm T
- 338 ICE_CONTENT2 post land cover change total ice content mm F
- 339 ICE_MODEL_FRACTION Ice sheet model fractional coverage unitless F
- 340 INT_SNOW accumulated swe (natural vegetated and crop landunits only) mm F
- 341 INT_SNOW_ICE accumulated swe (ice landunits only) mm F
- 342 IWUELN local noon intrinsic water use efficiency umolCO2/molH2O T
- 343 KROOT root conductance each soil layer 1/s F
- 344 KSOIL soil conductance in each soil layer 1/s F
- 345 K_ACT_SOM active soil organic potential loss coefficient 1/s F
- 346 K_CEL_LIT cellulosic litter potential loss coefficient 1/s F
- 347 K_LIG_LIT lignin litter potential loss coefficient 1/s F
- 348 K_MET_LIT metabolic litter potential loss coefficient 1/s F
- 349 K_PAS_SOM passive soil organic potential loss coefficient 1/s F
- 350 K_SLO_SOM slow soil organic ma potential loss coefficient 1/s F
- 351 LAI240 240hr average of leaf area index m^2/m^2 F
- 352 LAISHA shaded projected leaf area index m^2/m^2 T
- 353 LAISHA_TOP_CAN LAI in the shade by the top leaf layer of each canopy layer m2/m2 F
- 354 LAISHA_Z_CNLF LAI in the shade by each canopy and leaf layer m2/m2 F
- 355 LAISHA_Z_CNLFPFT LAI in the shade by each canopy, leaf, and PFT m2/m2 F
- 356 LAISUN sunlit projected leaf area index m^2/m^2 T
- 357 LAISUN_TOP_CAN LAI in the sun by the top leaf layer of each canopy layer m2/m2 F
- 358 LAISUN_Z_CNLF LAI in the sun by each canopy and leaf layer m2/m2 F
- 359 LAISUN_Z_CNLFPFT LAI in the sun by each canopy, leaf, and PFT m2/m2 F
- 360 LAI_BY_AGE leaf area index by age bin m2/m2 T
- 361 LAI_CANOPY_SCLS Leaf are index (LAI) by size class m2/m2 T
- 362 LAI_UNDERSTORY_SCLS number of understory plants by size class indiv/ha T
- 363 LAKEICEFRAC lake layer ice mass fraction unitless F
- 364 LAKEICEFRAC_SURF surface lake layer ice mass fraction unitless T
- 365 LAKEICETHICK thickness of lake ice (including physical expansion on freezing) m T
- 366 LEAFC Total carbon in live plant leaves kgC ha-1 T
- 367 LEAFC_SCPF leaf carbon mass by size-class x pft kgC/ha F
- 368 LEAF_HEIGHT_DIST leaf height distribution m2/m2 T
- 369 LEAF_MD_CANOPY_SCLS LEAF_MD for canopy plants by size class kg C / ha / yr F
- 370 LEAF_MD_UNDERSTORY_SCLS LEAF_MD for understory plants by size class kg C / ha / yr F
- 371 LEAF_MR RDARK (leaf maintenance respiration) kg C / m2 / yr T
- 372 LIG_LITC LIG_LIT C gC/m^2 T
- 373 LIG_LITC_1m LIG_LIT C to 1 meter gC/m^2 F
- 374 LIG_LITC_TNDNCY_VERT_TRA lignin litter C tendency due to vertical transport gC/m^3/s F
- 375 LIG_LITC_TO_SLO_SOMC decomp. of lignin litter C to slow soil organic ma C gC/m^2/s F
- 376 LIG_LITC_TO_SLO_SOMC_vr decomp. of lignin litter C to slow soil organic ma C gC/m^3/s F
- 377 LIG_LITC_vr LIG_LIT C (vertically resolved) gC/m^3 T
- 378 LIG_LITN LIG_LIT N gN/m^2 T
- 379 LIG_LITN_1m LIG_LIT N to 1 meter gN/m^2 F
- 380 LIG_LITN_TNDNCY_VERT_TRA lignin litter N tendency due to vertical transport gN/m^3/s F
- 381 LIG_LITN_TO_SLO_SOMN decomp. of lignin litter N to slow soil organic ma N gN/m^2 F
- 382 LIG_LITN_TO_SLO_SOMN_vr decomp. of lignin litter N to slow soil organic ma N gN/m^3 F
- 383 LIG_LITN_vr LIG_LIT N (vertically resolved) gN/m^3 T
- 384 LIG_LIT_HR Het. Resp. from lignin litter gC/m^2/s F
- 385 LIG_LIT_HR_vr Het. Resp. from lignin litter gC/m^3/s F
- 386 LIQCAN intercepted liquid water mm T
- 387 LIQUID_CONTENT1 initial gridcell total liq content mm T
- 388 LIQUID_CONTENT2 post landuse change gridcell total liq content mm F
- 389 LIQUID_WATER_TEMP1 initial gridcell weighted average liquid water temperature K F
- 390 LITTERC_HR litter C heterotrophic respiration gC/m^2/s T
- 391 LITTER_CWD total mass of litter in CWD kg ha-1 T
- 392 LITTER_CWD_AG_ELEM mass of above ground litter in CWD (trunks/branches/twigs) kg ha-1 T
- 393 LITTER_CWD_BG_ELEM mass of below ground litter in CWD (coarse roots) kg ha-1 T
- 394 LITTER_FINES_AG_ELEM mass of above ground litter in fines (leaves,nonviable seed) kg ha-1 T
- 395 LITTER_FINES_BG_ELEM mass of below ground litter in fines (fineroots) kg ha-1 T
- 396 LITTER_IN FATES litter flux in gC m-2 s-1 T
- 397 LITTER_IN_ELEM FATES litter flux in kg ha-1 d-1 T
- 398 LITTER_OUT FATES litter flux out gC m-2 s-1 T
- 399 LITTER_OUT_ELEM FATES litter flux out (fragmentation only) kg ha-1 d-1 T
- 400 LIVECROOT_MR live coarse root maintenance respiration) kg C / m2 / yr T
- 401 LIVECROOT_MR_CANOPY_SCLS LIVECROOT_MR for canopy plants by size class kg C / ha / yr F
- 402 LIVECROOT_MR_UNDERSTORY_SCLS LIVECROOT_MR for understory plants by size class kg C / ha / yr F
- 403 LIVESTEM_MR live stem maintenance respiration) kg C / m2 / yr T
- 404 LIVESTEM_MR_CANOPY_SCLS LIVESTEM_MR for canopy plants by size class kg C / ha / yr F
- 405 LIVESTEM_MR_UNDERSTORY_SCLS LIVESTEM_MR for understory plants by size class kg C / ha / yr F
- 406 LNC leaf N concentration gN leaf/m^2 T
- 407 LWdown atmospheric longwave radiation (downscaled to columns in glacier regions) W/m^2 F
- 408 LWup upwelling longwave radiation W/m^2 F
- 409 M10_CACLS age senescence mortality by cohort age N/ha/yr T
- 410 M10_CAPF age senescence mortality by pft/cohort age N/ha/yr F
- 411 M10_SCLS age senescence mortality by size N/ha/yr T
- 412 M10_SCPF age senescence mortality by pft/size N/ha/yr F
- 413 M1_SCLS background mortality by size N/ha/yr T
- 414 M1_SCPF background mortality by pft/size N/ha/yr F
- 415 M2_SCLS hydraulic mortality by size N/ha/yr T
- 416 M2_SCPF hydraulic mortality by pft/size N/ha/yr F
- 417 M3_SCLS carbon starvation mortality by size N/ha/yr T
- 418 M3_SCPF carbon starvation mortality by pft/size N/ha/yr F
- 419 M4_SCLS impact mortality by size N/ha/yr T
- 420 M4_SCPF impact mortality by pft/size N/ha/yr F
- 421 M5_SCLS fire mortality by size N/ha/yr T
- 422 M5_SCPF fire mortality by pft/size N/ha/yr F
- 423 M6_SCLS termination mortality by size N/ha/yr T
- 424 M6_SCPF termination mortality by pft/size N/ha/yr F
- 425 M7_SCLS logging mortality by size N/ha/event T
- 426 M7_SCPF logging mortality by pft/size N/ha/event F
- 427 M8_SCLS freezing mortality by size N/ha/event T
- 428 M8_SCPF freezing mortality by pft/size N/ha/yr F
- 429 M9_SCLS senescence mortality by size N/ha/yr T
- 430 M9_SCPF senescence mortality by pft/size N/ha/yr F
- 431 MAINT_RESP maintenance respiration gC/m^2/s T
- 432 MET_LITC MET_LIT C gC/m^2 T
- 433 MET_LITC_1m MET_LIT C to 1 meter gC/m^2 F
- 434 MET_LITC_TNDNCY_VERT_TRA metabolic litter C tendency due to vertical transport gC/m^3/s F
- 435 MET_LITC_TO_ACT_SOMC decomp. of metabolic litter C to active soil organic C gC/m^2/s F
- 436 MET_LITC_TO_ACT_SOMC_vr decomp. of metabolic litter C to active soil organic C gC/m^3/s F
- 437 MET_LITC_vr MET_LIT C (vertically resolved) gC/m^3 T
- 438 MET_LITN MET_LIT N gN/m^2 T
- 439 MET_LITN_1m MET_LIT N to 1 meter gN/m^2 F
- 440 MET_LITN_TNDNCY_VERT_TRA metabolic litter N tendency due to vertical transport gN/m^3/s F
- 441 MET_LITN_TO_ACT_SOMN decomp. of metabolic litter N to active soil organic N gN/m^2 F
- 442 MET_LITN_TO_ACT_SOMN_vr decomp. of metabolic litter N to active soil organic N gN/m^3 F
- 443 MET_LITN_vr MET_LIT N (vertically resolved) gN/m^3 T
- 444 MET_LIT_HR Het. Resp. from metabolic litter gC/m^2/s F
- 445 MET_LIT_HR_vr Het. Resp. from metabolic litter gC/m^3/s F
- 446 MORTALITY Rate of total mortality by PFT indiv/ha/yr T
- 447 MORTALITY_CANOPY_SCAG mortality rate of canopy plants in each size x age class plants/ha/yr F
- 448 MORTALITY_CANOPY_SCLS total mortality of canopy trees by size class indiv/ha/yr T
- 449 MORTALITY_CANOPY_SCPF total mortality of canopy plants by pft/size N/ha/yr F
- 450 MORTALITY_CARBONFLUX_CANOPY flux of biomass carbon from live to dead pools from mortality of canopy plants gC/m2/s T
- 451 MORTALITY_CARBONFLUX_UNDERSTORY flux of biomass carbon from live to dead pools from mortality of understory plants gC/m2/s T
- 452 MORTALITY_UNDERSTORY_SCAG mortality rate of understory plantsin each size x age class plants/ha/yr F
- 453 MORTALITY_UNDERSTORY_SCLS total mortality of understory trees by size class indiv/ha/yr T
- 454 MORTALITY_UNDERSTORY_SCPF total mortality of understory plants by pft/size N/ha/yr F
- 455 M_ACT_SOMC_TO_LEACHING active soil organic C leaching loss gC/m^2/s F
- 456 M_ACT_SOMN_TO_LEACHING active soil organic N leaching loss gN/m^2/s F
- 457 M_CEL_LITC_TO_LEACHING cellulosic litter C leaching loss gC/m^2/s F
- 458 M_CEL_LITN_TO_LEACHING cellulosic litter N leaching loss gN/m^2/s F
- 459 M_LIG_LITC_TO_LEACHING lignin litter C leaching loss gC/m^2/s F
- 460 M_LIG_LITN_TO_LEACHING lignin litter N leaching loss gN/m^2/s F
- 461 M_MET_LITC_TO_LEACHING metabolic litter C leaching loss gC/m^2/s F
- 462 M_MET_LITN_TO_LEACHING metabolic litter N leaching loss gN/m^2/s F
- 463 M_PAS_SOMC_TO_LEACHING passive soil organic C leaching loss gC/m^2/s F
- 464 M_PAS_SOMN_TO_LEACHING passive soil organic N leaching loss gN/m^2/s F
- 465 M_SLO_SOMC_TO_LEACHING slow soil organic ma C leaching loss gC/m^2/s F
- 466 M_SLO_SOMN_TO_LEACHING slow soil organic ma N leaching loss gN/m^2/s F
- 467 NCL_BY_AGE number of canopy levels by age bin -- F
- 468 NDEP_TO_SMINN atmospheric N deposition to soil mineral N gN/m^2/s T
- 469 NEM Gridcell net adjustment to net carbon exchange passed to atm. for methane production gC/m2/s T
- 470 NEP net ecosystem production gC/m^2/s T
- 471 NET_C_UPTAKE_CNLF net carbon uptake by each canopy and leaf layer per unit ground area (i.e. divide by CROWNAREA gC/m2/s F
- 472 NET_NMIN net rate of N mineralization gN/m^2/s T
- 473 NFIX_TO_SMINN symbiotic/asymbiotic N fixation to soil mineral N gN/m^2/s T
- 474 NPATCH_BY_AGE number of patches by age bin -- F
- 475 NPLANT_CACLS number of plants by coage class indiv/ha T
- 476 NPLANT_CANOPY_SCAG number of plants per hectare in canopy in each size x age class plants/ha F
- 477 NPLANT_CANOPY_SCLS number of canopy plants by size class indiv/ha T
- 478 NPLANT_CANOPY_SCPF stem number of canopy plants density by pft/size N/ha F
- 479 NPLANT_CAPF stem number density by pft/coage N/ha F
- 480 NPLANT_SCAG number of plants per hectare in each size x age class plants/ha T
- 481 NPLANT_SCAGPFT number of plants per hectare in each size x age x pft class plants/ha F
- 482 NPLANT_SCLS number of plants by size class indiv/ha T
- 483 NPLANT_SCPF stem number density by pft/size N/ha F
- 484 NPLANT_UNDERSTORY_SCAG number of plants per hectare in understory in each size x age class plants/ha F
- 485 NPLANT_UNDERSTORY_SCLS number of understory plants by size class indiv/ha T
- 486 NPLANT_UNDERSTORY_SCPF stem number of understory plants density by pft/size N/ha F
- 487 NPP net primary production gC/m^2/s T
- 488 NPP_AGDW_SCPF NPP flux into above-ground deadwood by pft/size kgC/m2/yr F
- 489 NPP_AGEPFT NPP per PFT in each age bin kgC/m2/yr F
- 490 NPP_AGSW_SCPF NPP flux into above-ground sapwood by pft/size kgC/m2/yr F
- 491 NPP_BDEAD_CANOPY_SCLS NPP_BDEAD for canopy plants by size class kg C / ha / yr F
- 492 NPP_BDEAD_UNDERSTORY_SCLS NPP_BDEAD for understory plants by size class kg C / ha / yr F
- 493 NPP_BGDW_SCPF NPP flux into below-ground deadwood by pft/size kgC/m2/yr F
- 494 NPP_BGSW_SCPF NPP flux into below-ground sapwood by pft/size kgC/m2/yr F
- 495 NPP_BSEED_CANOPY_SCLS NPP_BSEED for canopy plants by size class kg C / ha / yr F
- 496 NPP_BSEED_UNDERSTORY_SCLS NPP_BSEED for understory plants by size class kg C / ha / yr F
- 497 NPP_BSW_CANOPY_SCLS NPP_BSW for canopy plants by size class kg C / ha / yr F
- 498 NPP_BSW_UNDERSTORY_SCLS NPP_BSW for understory plants by size class kg C / ha / yr F
- 499 NPP_BY_AGE net primary productivity by age bin gC/m^2/s F
- 500 NPP_CROOT NPP flux into coarse roots kgC/m2/yr T
- 501 NPP_FNRT_SCPF NPP flux into fine roots by pft/size kgC/m2/yr F
- 502 NPP_FROOT NPP flux into fine roots kgC/m2/yr T
- 503 NPP_FROOT_CANOPY_SCLS NPP_FROOT for canopy plants by size class kg C / ha / yr F
- 504 NPP_FROOT_UNDERSTORY_SCLS NPP_FROOT for understory plants by size class kg C / ha / yr F
- 505 NPP_LEAF NPP flux into leaves kgC/m2/yr T
- 506 NPP_LEAF_CANOPY_SCLS NPP_LEAF for canopy plants by size class kg C / ha / yr F
- 507 NPP_LEAF_SCPF NPP flux into leaves by pft/size kgC/m2/yr F
- 508 NPP_LEAF_UNDERSTORY_SCLS NPP_LEAF for understory plants by size class kg C / ha / yr F
- 509 NPP_SCPF total net primary production by pft/size kgC/m2/yr F
- 510 NPP_SEED NPP flux into seeds kgC/m2/yr T
- 511 NPP_SEED_SCPF NPP flux into seeds by pft/size kgC/m2/yr F
- 512 NPP_STEM NPP flux into stem kgC/m2/yr T
- 513 NPP_STOR NPP flux into storage tissues kgC/m2/yr T
- 514 NPP_STORE_CANOPY_SCLS NPP_STORE for canopy plants by size class kg C / ha / yr F
- 515 NPP_STORE_UNDERSTORY_SCLS NPP_STORE for understory plants by size class kg C / ha / yr F
- 516 NPP_STOR_SCPF NPP flux into storage by pft/size kgC/m2/yr F
- 517 NSUBSTEPS number of adaptive timesteps in CLM timestep unitless F
- 518 O2_DECOMP_DEPTH_UNSAT O2 consumption from HR and AR for non-inundated area mol/m3/s F
- 519 OBU Monin-Obukhov length m F
- 520 OCDEP total OC deposition (dry+wet) from atmosphere kg/m^2/s T
- 521 O_SCALAR fraction by which decomposition is reduced due to anoxia unitless T
- 522 PARPROF_DIF_CNLF Radiative profile of diffuse PAR through each canopy and leaf layer (averaged across PFTs) W/m2 F
- 523 PARPROF_DIF_CNLFPFT Radiative profile of diffuse PAR through each canopy, leaf, and PFT W/m2 F
- 524 PARPROF_DIR_CNLF Radiative profile of direct PAR through each canopy and leaf layer (averaged across PFTs) W/m2 F
- 525 PARPROF_DIR_CNLFPFT Radiative profile of direct PAR through each canopy, leaf, and PFT W/m2 F
- 526 PARSHA_Z_CAN PAR absorbed in the shade by top leaf layer in each canopy layer W/m2 F
- 527 PARSHA_Z_CNLF PAR absorbed in the shade by each canopy and leaf layer W/m2 F
- 528 PARSHA_Z_CNLFPFT PAR absorbed in the shade by each canopy, leaf, and PFT W/m2 F
- 529 PARSUN_Z_CAN PAR absorbed in the sun by top leaf layer in each canopy layer W/m2 F
- 530 PARSUN_Z_CNLF PAR absorbed in the sun by each canopy and leaf layer W/m2 F
- 531 PARSUN_Z_CNLFPFT PAR absorbed in the sun by each canopy, leaf, and PFT W/m2 F
- 532 PARVEGLN absorbed par by vegetation at local noon W/m^2 T
- 533 PAS_SOMC PAS_SOM C gC/m^2 T
- 534 PAS_SOMC_1m PAS_SOM C to 1 meter gC/m^2 F
- 535 PAS_SOMC_TNDNCY_VERT_TRA passive soil organic C tendency due to vertical transport gC/m^3/s F
- 536 PAS_SOMC_TO_ACT_SOMC decomp. of passive soil organic C to active soil organic C gC/m^2/s F
- 537 PAS_SOMC_TO_ACT_SOMC_vr decomp. of passive soil organic C to active soil organic C gC/m^3/s F
- 538 PAS_SOMC_vr PAS_SOM C (vertically resolved) gC/m^3 T
- 539 PAS_SOMN PAS_SOM N gN/m^2 T
- 540 PAS_SOMN_1m PAS_SOM N to 1 meter gN/m^2 F
- 541 PAS_SOMN_TNDNCY_VERT_TRA passive soil organic N tendency due to vertical transport gN/m^3/s F
- 542 PAS_SOMN_TO_ACT_SOMN decomp. of passive soil organic N to active soil organic N gN/m^2 F
- 543 PAS_SOMN_TO_ACT_SOMN_vr decomp. of passive soil organic N to active soil organic N gN/m^3 F
- 544 PAS_SOMN_vr PAS_SOM N (vertically resolved) gN/m^3 T
- 545 PAS_SOM_HR Het. Resp. from passive soil organic gC/m^2/s F
- 546 PAS_SOM_HR_vr Het. Resp. from passive soil organic gC/m^3/s F
- 547 PATCH_AREA_BY_AGE patch area by age bin m2/m2 T
- 548 PBOT atmospheric pressure at surface (downscaled to columns in glacier regions) Pa T
- 549 PCH4 atmospheric partial pressure of CH4 Pa T
- 550 PCO2 atmospheric partial pressure of CO2 Pa T
- 551 PFTbiomass total PFT level biomass gC/m2 T
- 552 PFTcanopycrownarea total PFT-level canopy-layer crown area m2/m2 F
- 553 PFTcrownarea total PFT level crown area m2/m2 F
- 554 PFTgpp total PFT-level GPP kg C m-2 y-1 T
- 555 PFTleafbiomass total PFT level leaf biomass gC/m2 T
- 556 PFTnindivs total PFT level number of individuals indiv / m2 T
- 557 PFTnpp total PFT-level NPP kg C m-2 y-1 T
- 558 PFTstorebiomass total PFT level stored biomass gC/m2 T
- 559 POTENTIAL_IMMOB potential N immobilization gN/m^2/s T
- 560 PRIMARYLAND_PATCHFUSION_ERROR Error in total primary lands associated with patch fusion m2 m-2 d-1 T
- 561 PROMOTION_CARBONFLUX promotion-associated biomass carbon flux from understory to canopy gC/m2/s T
- 562 PROMOTION_RATE_SCLS promotion rate from understory to canopy by size class indiv/ha/yr F
- 563 PSurf atmospheric pressure at surface (downscaled to columns in glacier regions) Pa F
- 564 Q2M 2m specific humidity kg/kg T
- 565 QAF canopy air humidity kg/kg F
- 566 QBOT atmospheric specific humidity (downscaled to columns in glacier regions) kg/kg T
- 567 QDIRECT_THROUGHFALL direct throughfall of liquid (rain + above-canopy irrigation) mm/s F
- 568 QDIRECT_THROUGHFALL_SNOW direct throughfall of snow mm/s F
- 569 QDRAI sub-surface drainage mm/s T
- 570 QDRAI_PERCH perched wt drainage mm/s T
- 571 QDRAI_XS saturation excess drainage mm/s T
- 572 QDRIP rate of excess canopy liquid falling off canopy mm/s F
- 573 QDRIP_SNOW rate of excess canopy snow falling off canopy mm/s F
- 574 QFLOOD runoff from river flooding mm/s T
- 575 QFLX_EVAP_TOT qflx_evap_soi + qflx_evap_can + qflx_tran_veg kg m-2 s-1 T
- 576 QFLX_EVAP_VEG vegetation evaporation mm H2O/s F
- 577 QFLX_ICE_DYNBAL ice dynamic land cover change conversion runoff flux mm/s T
- 578 QFLX_LIQDEW_TO_TOP_LAYER rate of liquid water deposited on top soil or snow layer (dew) mm H2O/s T
- 579 QFLX_LIQEVAP_FROM_TOP_LAYER rate of liquid water evaporated from top soil or snow layer mm H2O/s T
- 580 QFLX_LIQ_DYNBAL liq dynamic land cover change conversion runoff flux mm/s T
- 581 QFLX_LIQ_GRND liquid (rain+irrigation) on ground after interception mm H2O/s F
- 582 QFLX_SNOW_DRAIN drainage from snow pack mm/s T
- 583 QFLX_SNOW_DRAIN_ICE drainage from snow pack melt (ice landunits only) mm/s T
- 584 QFLX_SNOW_GRND snow on ground after interception mm H2O/s F
- 585 QFLX_SOLIDDEW_TO_TOP_LAYER rate of solid water deposited on top soil or snow layer (frost) mm H2O/s T
- 586 QFLX_SOLIDEVAP_FROM_TOP_LAYER rate of ice evaporated from top soil or snow layer (sublimation) (also includes bare ice subli mm H2O/s T
- 587 QFLX_SOLIDEVAP_FROM_TOP_LAYER_ICE rate of ice evaporated from top soil or snow layer (sublimation) (also includes bare ice subli mm H2O/s F
- 588 QH2OSFC surface water runoff mm/s T
- 589 QH2OSFC_TO_ICE surface water converted to ice mm/s F
- 590 QHR hydraulic redistribution mm/s T
- 591 QICE ice growth/melt mm/s T
- 592 QICE_FORC qice forcing sent to GLC mm/s F
- 593 QICE_FRZ ice growth mm/s T
- 594 QICE_MELT ice melt mm/s T
- 595 QINFL infiltration mm/s T
- 596 QINTR interception mm/s T
- 597 QIRRIG_DEMAND irrigation demand mm/s F
- 598 QIRRIG_DRIP water added via drip irrigation mm/s F
- 599 QIRRIG_FROM_GW_CONFINED water added through confined groundwater irrigation mm/s T
- 600 QIRRIG_FROM_GW_UNCONFINED water added through unconfined groundwater irrigation mm/s T
- 601 QIRRIG_FROM_SURFACE water added through surface water irrigation mm/s T
- 602 QIRRIG_SPRINKLER water added via sprinkler irrigation mm/s F
- 603 QOVER total surface runoff (includes QH2OSFC) mm/s T
- 604 QOVER_LAG time-lagged surface runoff for soil columns mm/s F
- 605 QPHSNEG net negative hydraulic redistribution flux mm/s F
- 606 QRGWL surface runoff at glaciers (liquid only), wetlands, lakes; also includes melted ice runoff fro mm/s T
- 607 QROOTSINK water flux from soil to root in each soil-layer mm/s F
- 608 QRUNOFF total liquid runoff not including correction for land use change mm/s T
- 609 QRUNOFF_ICE total liquid runoff not incl corret for LULCC (ice landunits only) mm/s T
- 610 QRUNOFF_ICE_TO_COUPLER total ice runoff sent to coupler (includes corrections for land use change) mm/s T
- 611 QRUNOFF_ICE_TO_LIQ liquid runoff from converted ice runoff mm/s F
- 612 QRUNOFF_R Rural total runoff mm/s F
- 613 QRUNOFF_TO_COUPLER total liquid runoff sent to coupler (includes corrections for land use change) mm/s T
- 614 QRUNOFF_U Urban total runoff mm/s F
- 615 QSNOCPLIQ excess liquid h2o due to snow capping not including correction for land use change mm H2O/s T
- 616 QSNOEVAP evaporation from snow (only when snl<0, otherwise it is equal to qflx_ev_soil) mm/s T
- 617 QSNOFRZ column-integrated snow freezing rate kg/m2/s T
- 618 QSNOFRZ_ICE column-integrated snow freezing rate (ice landunits only) mm/s T
- 619 QSNOMELT snow melt rate mm/s T
- 620 QSNOMELT_ICE snow melt (ice landunits only) mm/s T
- 621 QSNOUNLOAD canopy snow unloading mm/s T
- 622 QSNO_TEMPUNLOAD canopy snow temp unloading mm/s T
- 623 QSNO_WINDUNLOAD canopy snow wind unloading mm/s T
- 624 QSNWCPICE excess solid h2o due to snow capping not including correction for land use change mm H2O/s T
- 625 QSOIL Ground evaporation (soil/snow evaporation + soil/snow sublimation - dew) mm/s T
- 626 QSOIL_ICE Ground evaporation (ice landunits only) mm/s T
- 627 QTOPSOIL water input to surface mm/s F
- 628 QVEGE canopy evaporation mm/s T
- 629 QVEGT canopy transpiration mm/s T
- 630 Qair atmospheric specific humidity (downscaled to columns in glacier regions) kg/kg F
- 631 Qh sensible heat W/m^2 F
- 632 Qle total evaporation W/m^2 F
- 633 Qstor storage heat flux (includes snowmelt) W/m^2 F
- 634 Qtau momentum flux kg/m/s^2 F
- 635 RAH1 aerodynamical resistance s/m F
- 636 RAH2 aerodynamical resistance s/m F
- 637 RAIN atmospheric rain, after rain/snow repartitioning based on temperature mm/s T
- 638 RAIN_FROM_ATM atmospheric rain received from atmosphere (pre-repartitioning) mm/s T
- 639 RAIN_ICE atmospheric rain, after rain/snow repartitioning based on temperature (ice landunits only) mm/s F
- 640 RAM_LAKE aerodynamic resistance for momentum (lakes only) s/m F
- 641 RAW1 aerodynamical resistance s/m F
- 642 RAW2 aerodynamical resistance s/m F
- 643 RB leaf boundary resistance s/m F
- 644 RDARK_CANOPY_SCLS RDARK for canopy plants by size class kg C / ha / yr F
- 645 RDARK_UNDERSTORY_SCLS RDARK for understory plants by size class kg C / ha / yr F
- 646 RECRUITMENT Rate of recruitment by PFT indiv/ha/yr T
- 647 REPROC Total carbon in live plant reproductive tissues kgC ha-1 T
- 648 REPROC_SCPF reproductive carbon mass (on plant) by size-class x pft kgC/ha F
- 649 RESP_G_CANOPY_SCLS RESP_G for canopy plants by size class kg C / ha / yr F
- 650 RESP_G_UNDERSTORY_SCLS RESP_G for understory plants by size class kg C / ha / yr F
- 651 RESP_M_CANOPY_SCLS RESP_M for canopy plants by size class kg C / ha / yr F
- 652 RESP_M_UNDERSTORY_SCLS RESP_M for understory plants by size class kg C / ha / yr F
- 653 RH atmospheric relative humidity % F
- 654 RH2M 2m relative humidity % T
- 655 RH2M_R Rural 2m specific humidity % F
- 656 RH2M_U Urban 2m relative humidity % F
- 657 RHAF fractional humidity of canopy air fraction F
- 658 RH_LEAF fractional humidity at leaf surface fraction F
- 659 ROOT_MD_CANOPY_SCLS ROOT_MD for canopy plants by size class kg C / ha / yr F
- 660 ROOT_MD_UNDERSTORY_SCLS ROOT_MD for understory plants by size class kg C / ha / yr F
- 661 RSCANOPY canopy resistance s m-1 T
- 662 RSSHA shaded leaf stomatal resistance s/m T
- 663 RSSUN sunlit leaf stomatal resistance s/m T
- 664 Rainf atmospheric rain, after rain/snow repartitioning based on temperature mm/s F
- 665 Rnet net radiation W/m^2 F
- 666 SABG solar rad absorbed by ground W/m^2 T
- 667 SABG_PEN Rural solar rad penetrating top soil or snow layer watt/m^2 T
- 668 SABV solar rad absorbed by veg W/m^2 T
- 669 SAI_CANOPY_SCLS stem area index(SAI) by size class m2/m2 F
- 670 SAI_UNDERSTORY_SCLS number of understory plants by size class indiv/ha F
- 671 SAPWC Total carbon in live plant sapwood kgC ha-1 T
- 672 SAPWC_SCPF sapwood carbon mass by size-class x pft kgC/ha F
- 673 SCORCH_HEIGHT SPITFIRE Flame Scorch Height (calculated per PFT in each patch age bin) m T
- 674 SECONDARY_AREA_AGE_ANTHRO_DIST Secondary forest patch area age distribution since anthropgenic disturbance m2/m2 F
- 675 SECONDARY_AREA_PATCH_AGE_DIST Secondary forest patch area age distribution since any kind of disturbance m2/m2 F
- 676 SECONDARY_FOREST_BIOMASS Biomass on secondary lands (per total site area, mult by SECONDARY_FOREST_FRACTION to get per kgC/m2 F
- 677 SECONDARY_FOREST_FRACTION Secondary forest fraction m2/m2 F
- 678 SEEDS_IN Seed Production Rate gC m-2 s-1 T
- 679 SEEDS_IN_EXTERN_ELEM External Seed Influx Rate kg ha-1 d-1 T
- 680 SEEDS_IN_LOCAL_ELEM Within Site Seed Production Rate kg ha-1 d-1 T
- 681 SEED_BANK Total Seed Mass of all PFTs gC m-2 T
- 682 SEED_BANK_ELEM Total Seed Mass of all PFTs kg ha-1 T
- 683 SEED_DECAY_ELEM Seed mass decay (germinated and un-germinated) kg ha-1 d-1 T
- 684 SEED_GERM_ELEM Seed mass converted into new cohorts kg ha-1 d-1 T
- 685 SEED_PROD_CANOPY_SCLS SEED_PROD for canopy plants by size class kg C / ha / yr F
- 686 SEED_PROD_UNDERSTORY_SCLS SEED_PROD for understory plants by size class kg C / ha / yr F
- 687 SITE_COLD_STATUS Site level cold status, 0=not cold-dec, 1=too cold for leaves, 2=not-too cold 0,1,2 T
- 688 SITE_DAYSINCE_COLDLEAFOFF site level days elapsed since cold leaf drop days T
- 689 SITE_DAYSINCE_COLDLEAFON site level days elapsed since cold leaf flush days T
- 690 SITE_DAYSINCE_DROUGHTLEAFOFF site level days elapsed since drought leaf drop days T
- 691 SITE_DAYSINCE_DROUGHTLEAFON site level days elapsed since drought leaf flush days T
- 692 SITE_DROUGHT_STATUS Site level drought status, <2 too dry for leaves, >=2 not-too dry 0,1,2,3 T
- 693 SITE_GDD site level growing degree days degC T
- 694 SITE_MEANLIQVOL_DROUGHTPHEN site level mean liquid water volume for drought phen m3/m3 T
- 695 SITE_NCHILLDAYS site level number of chill days days T
- 696 SITE_NCOLDDAYS site level number of cold days days T
- 697 SLO_SOMC SLO_SOM C gC/m^2 T
- 698 SLO_SOMC_1m SLO_SOM C to 1 meter gC/m^2 F
- 699 SLO_SOMC_TNDNCY_VERT_TRA slow soil organic ma C tendency due to vertical transport gC/m^3/s F
- 700 SLO_SOMC_TO_ACT_SOMC decomp. of slow soil organic ma C to active soil organic C gC/m^2/s F
- 701 SLO_SOMC_TO_ACT_SOMC_vr decomp. of slow soil organic ma C to active soil organic C gC/m^3/s F
- 702 SLO_SOMC_TO_PAS_SOMC decomp. of slow soil organic ma C to passive soil organic C gC/m^2/s F
- 703 SLO_SOMC_TO_PAS_SOMC_vr decomp. of slow soil organic ma C to passive soil organic C gC/m^3/s F
- 704 SLO_SOMC_vr SLO_SOM C (vertically resolved) gC/m^3 T
- 705 SLO_SOMN SLO_SOM N gN/m^2 T
- 706 SLO_SOMN_1m SLO_SOM N to 1 meter gN/m^2 F
- 707 SLO_SOMN_TNDNCY_VERT_TRA slow soil organic ma N tendency due to vertical transport gN/m^3/s F
- 708 SLO_SOMN_TO_ACT_SOMN decomp. of slow soil organic ma N to active soil organic N gN/m^2 F
- 709 SLO_SOMN_TO_ACT_SOMN_vr decomp. of slow soil organic ma N to active soil organic N gN/m^3 F
- 710 SLO_SOMN_TO_PAS_SOMN decomp. of slow soil organic ma N to passive soil organic N gN/m^2 F
- 711 SLO_SOMN_TO_PAS_SOMN_vr decomp. of slow soil organic ma N to passive soil organic N gN/m^3 F
- 712 SLO_SOMN_vr SLO_SOM N (vertically resolved) gN/m^3 T
- 713 SLO_SOM_HR_S1 Het. Resp. from slow soil organic ma gC/m^2/s F
- 714 SLO_SOM_HR_S1_vr Het. Resp. from slow soil organic ma gC/m^3/s F
- 715 SLO_SOM_HR_S3 Het. Resp. from slow soil organic ma gC/m^2/s F
- 716 SLO_SOM_HR_S3_vr Het. Resp. from slow soil organic ma gC/m^3/s F
- 717 SMINN soil mineral N gN/m^2 T
- 718 SMINN_LEACHED soil mineral N pool loss to leaching gN/m^2/s T
- 719 SMINN_LEACHED_vr soil mineral N pool loss to leaching gN/m^3/s F
- 720 SMINN_TO_DENIT_EXCESS denitrification from excess mineral N pool gN/m^2/s F
- 721 SMINN_TO_DENIT_EXCESS_vr denitrification from excess mineral N pool gN/m^3/s F
- 722 SMINN_TO_DENIT_L1S1 denitrification for decomp. of metabolic litterto ACT_SOM gN/m^2 F
- 723 SMINN_TO_DENIT_L1S1_vr denitrification for decomp. of metabolic litterto ACT_SOM gN/m^3 F
- 724 SMINN_TO_DENIT_L2S1 denitrification for decomp. of cellulosic litterto ACT_SOM gN/m^2 F
- 725 SMINN_TO_DENIT_L2S1_vr denitrification for decomp. of cellulosic litterto ACT_SOM gN/m^3 F
- 726 SMINN_TO_DENIT_L3S2 denitrification for decomp. of lignin litterto SLO_SOM gN/m^2 F
- 727 SMINN_TO_DENIT_L3S2_vr denitrification for decomp. of lignin litterto SLO_SOM gN/m^3 F
- 728 SMINN_TO_DENIT_S1S2 denitrification for decomp. of active soil organicto SLO_SOM gN/m^2 F
- 729 SMINN_TO_DENIT_S1S2_vr denitrification for decomp. of active soil organicto SLO_SOM gN/m^3 F
- 730 SMINN_TO_DENIT_S1S3 denitrification for decomp. of active soil organicto PAS_SOM gN/m^2 F
- 731 SMINN_TO_DENIT_S1S3_vr denitrification for decomp. of active soil organicto PAS_SOM gN/m^3 F
- 732 SMINN_TO_DENIT_S2S1 denitrification for decomp. of slow soil organic mato ACT_SOM gN/m^2 F
- 733 SMINN_TO_DENIT_S2S1_vr denitrification for decomp. of slow soil organic mato ACT_SOM gN/m^3 F
- 734 SMINN_TO_DENIT_S2S3 denitrification for decomp. of slow soil organic mato PAS_SOM gN/m^2 F
- 735 SMINN_TO_DENIT_S2S3_vr denitrification for decomp. of slow soil organic mato PAS_SOM gN/m^3 F
- 736 SMINN_TO_DENIT_S3S1 denitrification for decomp. of passive soil organicto ACT_SOM gN/m^2 F
- 737 SMINN_TO_DENIT_S3S1_vr denitrification for decomp. of passive soil organicto ACT_SOM gN/m^3 F
- 738 SMINN_TO_PLANT plant uptake of soil mineral N gN/m^2/s T
- 739 SMINN_TO_S1N_L1 mineral N flux for decomp. of MET_LITto ACT_SOM gN/m^2 F
- 740 SMINN_TO_S1N_L1_vr mineral N flux for decomp. of MET_LITto ACT_SOM gN/m^3 F
- 741 SMINN_TO_S1N_L2 mineral N flux for decomp. of CEL_LITto ACT_SOM gN/m^2 F
- 742 SMINN_TO_S1N_L2_vr mineral N flux for decomp. of CEL_LITto ACT_SOM gN/m^3 F
- 743 SMINN_TO_S1N_S2 mineral N flux for decomp. of SLO_SOMto ACT_SOM gN/m^2 F
- 744 SMINN_TO_S1N_S2_vr mineral N flux for decomp. of SLO_SOMto ACT_SOM gN/m^3 F
- 745 SMINN_TO_S1N_S3 mineral N flux for decomp. of PAS_SOMto ACT_SOM gN/m^2 F
- 746 SMINN_TO_S1N_S3_vr mineral N flux for decomp. of PAS_SOMto ACT_SOM gN/m^3 F
- 747 SMINN_TO_S2N_L3 mineral N flux for decomp. of LIG_LITto SLO_SOM gN/m^2 F
- 748 SMINN_TO_S2N_L3_vr mineral N flux for decomp. of LIG_LITto SLO_SOM gN/m^3 F
- 749 SMINN_TO_S2N_S1 mineral N flux for decomp. of ACT_SOMto SLO_SOM gN/m^2 F
- 750 SMINN_TO_S2N_S1_vr mineral N flux for decomp. of ACT_SOMto SLO_SOM gN/m^3 F
- 751 SMINN_TO_S3N_S1 mineral N flux for decomp. of ACT_SOMto PAS_SOM gN/m^2 F
- 752 SMINN_TO_S3N_S1_vr mineral N flux for decomp. of ACT_SOMto PAS_SOM gN/m^3 F
- 753 SMINN_TO_S3N_S2 mineral N flux for decomp. of SLO_SOMto PAS_SOM gN/m^2 F
- 754 SMINN_TO_S3N_S2_vr mineral N flux for decomp. of SLO_SOMto PAS_SOM gN/m^3 F
- 755 SMINN_vr soil mineral N gN/m^3 T
- 756 SMP soil matric potential (natural vegetated and crop landunits only) mm T
- 757 SNOBCMCL mass of BC in snow column kg/m2 T
- 758 SNOBCMSL mass of BC in top snow layer kg/m2 T
- 759 SNOCAN intercepted snow mm T
- 760 SNODSTMCL mass of dust in snow column kg/m2 T
- 761 SNODSTMSL mass of dust in top snow layer kg/m2 T
- 762 SNOFSDSND direct nir incident solar radiation on snow W/m^2 F
- 763 SNOFSDSNI diffuse nir incident solar radiation on snow W/m^2 F
- 764 SNOFSDSVD direct vis incident solar radiation on snow W/m^2 F
- 765 SNOFSDSVI diffuse vis incident solar radiation on snow W/m^2 F
- 766 SNOFSRND direct nir reflected solar radiation from snow W/m^2 T
- 767 SNOFSRNI diffuse nir reflected solar radiation from snow W/m^2 T
- 768 SNOFSRVD direct vis reflected solar radiation from snow W/m^2 T
- 769 SNOFSRVI diffuse vis reflected solar radiation from snow W/m^2 T
- 770 SNOINTABS Fraction of incoming solar absorbed by lower snow layers - T
- 771 SNOLIQFL top snow layer liquid water fraction (land) fraction F
- 772 SNOOCMCL mass of OC in snow column kg/m2 T
- 773 SNOOCMSL mass of OC in top snow layer kg/m2 T
- 774 SNORDSL top snow layer effective grain radius m^-6 F
- 775 SNOTTOPL snow temperature (top layer) K F
- 776 SNOTTOPL_ICE snow temperature (top layer, ice landunits only) K F
- 777 SNOTXMASS snow temperature times layer mass, layer sum; to get mass-weighted temperature, divide by (SNO K kg/m2 T
- 778 SNOTXMASS_ICE snow temperature times layer mass, layer sum (ice landunits only); to get mass-weighted temper K kg/m2 F
- 779 SNOW atmospheric snow, after rain/snow repartitioning based on temperature mm/s T
- 780 SNOWDP gridcell mean snow height m T
- 781 SNOWICE snow ice kg/m2 T
- 782 SNOWICE_ICE snow ice (ice landunits only) kg/m2 F
- 783 SNOWLIQ snow liquid water kg/m2 T
- 784 SNOWLIQ_ICE snow liquid water (ice landunits only) kg/m2 F
- 785 SNOW_5D 5day snow avg m F
- 786 SNOW_DEPTH snow height of snow covered area m T
- 787 SNOW_DEPTH_ICE snow height of snow covered area (ice landunits only) m F
- 788 SNOW_FROM_ATM atmospheric snow received from atmosphere (pre-repartitioning) mm/s T
- 789 SNOW_ICE atmospheric snow, after rain/snow repartitioning based on temperature (ice landunits only) mm/s F
- 790 SNOW_PERSISTENCE Length of time of continuous snow cover (nat. veg. landunits only) seconds T
- 791 SNOW_SINKS snow sinks (liquid water) mm/s T
- 792 SNOW_SOURCES snow sources (liquid water) mm/s T
- 793 SNO_ABS Absorbed solar radiation in each snow layer W/m^2 F
- 794 SNO_ABS_ICE Absorbed solar radiation in each snow layer (ice landunits only) W/m^2 F
- 795 SNO_BW Partial density of water in the snow pack (ice + liquid) kg/m3 F
- 796 SNO_BW_ICE Partial density of water in the snow pack (ice + liquid, ice landunits only) kg/m3 F
- 797 SNO_EXISTENCE Fraction of averaging period for which each snow layer existed unitless F
- 798 SNO_FRZ snow freezing rate in each snow layer kg/m2/s F
- 799 SNO_FRZ_ICE snow freezing rate in each snow layer (ice landunits only) mm/s F
- 800 SNO_GS Mean snow grain size Microns F
- 801 SNO_GS_ICE Mean snow grain size (ice landunits only) Microns F
- 802 SNO_ICE Snow ice content kg/m2 F
- 803 SNO_LIQH2O Snow liquid water content kg/m2 F
- 804 SNO_MELT snow melt rate in each snow layer mm/s F
- 805 SNO_MELT_ICE snow melt rate in each snow layer (ice landunits only) mm/s F
- 806 SNO_T Snow temperatures K F
- 807 SNO_TK Thermal conductivity W/m-K F
- 808 SNO_TK_ICE Thermal conductivity (ice landunits only) W/m-K F
- 809 SNO_T_ICE Snow temperatures (ice landunits only) K F
- 810 SNO_Z Snow layer thicknesses m F
- 811 SNO_Z_ICE Snow layer thicknesses (ice landunits only) m F
- 812 SNOdTdzL top snow layer temperature gradient (land) K/m F
- 813 SOIL10 10-day running mean of 12cm layer soil K F
- 814 SOILC_HR soil C heterotrophic respiration gC/m^2/s T
- 815 SOILC_vr SOIL C (vertically resolved) gC/m^3 T
- 816 SOILICE soil ice (natural vegetated and crop landunits only) kg/m2 T
- 817 SOILLIQ soil liquid water (natural vegetated and crop landunits only) kg/m2 T
- 818 SOILN_vr SOIL N (vertically resolved) gN/m^3 T
- 819 SOILPSI soil water potential in each soil layer MPa F
- 820 SOILRESIS soil resistance to evaporation s/m T
- 821 SOILWATER_10CM soil liquid water + ice in top 10cm of soil (veg landunits only) kg/m2 T
- 822 SOMC_FIRE C loss due to peat burning gC/m^2/s T
- 823 SOM_C_LEACHED total flux of C from SOM pools due to leaching gC/m^2/s T
- 824 SOM_N_LEACHED total flux of N from SOM pools due to leaching gN/m^2/s F
- 825 STOREC Total carbon in live plant storage kgC ha-1 T
- 826 STOREC_SCPF storage carbon mass by size-class x pft kgC/ha F
- 827 SUM_FUEL total ground fuel related to ros (omits 1000hr fuels) gC m-2 T
- 828 SUM_FUEL_BY_PATCH_AGE spitfire ground fuel related to ros (omits 1000hr fuels) within each patch age bin (divide by gC / m2 of site area T
- 829 SUPPLEMENT_TO_SMINN supplemental N supply gN/m^2/s T
- 830 SWBGT 2 m Simplified Wetbulb Globe Temp C T
- 831 SWBGT_R Rural 2 m Simplified Wetbulb Globe Temp C T
- 832 SWBGT_U Urban 2 m Simplified Wetbulb Globe Temp C T
- 833 SWdown atmospheric incident solar radiation W/m^2 F
- 834 SWup upwelling shortwave radiation W/m^2 F
- 835 SoilAlpha factor limiting ground evap unitless F
- 836 SoilAlpha_U urban factor limiting ground evap unitless F
- 837 T10 10-day running mean of 2-m temperature K F
- 838 TAF canopy air temperature K F
- 839 TAUX zonal surface stress kg/m/s^2 T
- 840 TAUY meridional surface stress kg/m/s^2 T
- 841 TBOT atmospheric air temperature (downscaled to columns in glacier regions) K T
- 842 TBUILD internal urban building air temperature K T
- 843 TBUILD_MAX prescribed maximum interior building temperature K F
- 844 TFLOOR floor temperature K F
- 845 TG ground temperature K T
- 846 TG_ICE ground temperature (ice landunits only) K F
- 847 TG_R Rural ground temperature K F
- 848 TG_U Urban ground temperature K F
- 849 TH2OSFC surface water temperature K T
- 850 THBOT atmospheric air potential temperature (downscaled to columns in glacier regions) K T
- 851 TKE1 top lake level eddy thermal conductivity W/(mK) T
- 852 TLAI total projected leaf area index m^2/m^2 T
- 853 TLAKE lake temperature K T
- 854 TOPO_COL column-level topographic height m F
- 855 TOPO_COL_ICE column-level topographic height (ice landunits only) m F
- 856 TOPO_FORC topograephic height sent to GLC m F
- 857 TOTCOLCH4 total belowground CH4 (0 for non-lake special landunits in the absence of dynamic landunits) gC/m2 T
- 858 TOTLITC total litter carbon gC/m^2 T
- 859 TOTLITC_1m total litter carbon to 1 meter depth gC/m^2 T
- 860 TOTLITN total litter N gN/m^2 T
- 861 TOTLITN_1m total litter N to 1 meter gN/m^2 T
- 862 TOTSOILICE vertically summed soil cie (veg landunits only) kg/m2 T
- 863 TOTSOILLIQ vertically summed soil liquid water (veg landunits only) kg/m2 T
- 864 TOTSOMC total soil organic matter carbon gC/m^2 T
- 865 TOTSOMC_1m total soil organic matter carbon to 1 meter depth gC/m^2 T
- 866 TOTSOMN total soil organic matter N gN/m^2 T
- 867 TOTSOMN_1m total soil organic matter N to 1 meter gN/m^2 T
- 868 TOTVEGC Total carbon in live plants kgC ha-1 T
- 869 TOTVEGC_SCPF total vegetation carbon mass in live plants by size-class x pft kgC/ha F
- 870 TRAFFICFLUX sensible heat flux from urban traffic W/m^2 F
- 871 TREFMNAV daily minimum of average 2-m temperature K T
- 872 TREFMNAV_R Rural daily minimum of average 2-m temperature K F
- 873 TREFMNAV_U Urban daily minimum of average 2-m temperature K F
- 874 TREFMXAV daily maximum of average 2-m temperature K T
- 875 TREFMXAV_R Rural daily maximum of average 2-m temperature K F
- 876 TREFMXAV_U Urban daily maximum of average 2-m temperature K F
- 877 TRIMMING Degree to which canopy expansion is limited by leaf economics none T
- 878 TRIMMING_CANOPY_SCLS trimming term of canopy plants by size class indiv/ha F
- 879 TRIMMING_UNDERSTORY_SCLS trimming term of understory plants by size class indiv/ha F
- 880 TROOF_INNER roof inside surface temperature K F
- 881 TSA 2m air temperature K T
- 882 TSAI total projected stem area index m^2/m^2 T
- 883 TSA_ICE 2m air temperature (ice landunits only) K F
- 884 TSA_R Rural 2m air temperature K F
- 885 TSA_U Urban 2m air temperature K F
- 886 TSHDW_INNER shadewall inside surface temperature K F
- 887 TSKIN skin temperature K T
- 888 TSL temperature of near-surface soil layer (natural vegetated and crop landunits only) K T
- 889 TSOI soil temperature (natural vegetated and crop landunits only) K T
- 890 TSOI_10CM soil temperature in top 10cm of soil K T
- 891 TSOI_ICE soil temperature (ice landunits only) K T
- 892 TSRF_FORC surface temperature sent to GLC K F
- 893 TSUNW_INNER sunwall inside surface temperature K F
- 894 TV vegetation temperature K T
- 895 TV24 vegetation temperature (last 24hrs) K F
- 896 TV240 vegetation temperature (last 240hrs) K F
- 897 TWS total water storage mm T
- 898 T_SCALAR temperature inhibition of decomposition unitless T
- 899 Tair atmospheric air temperature (downscaled to columns in glacier regions) K F
- 900 Tair_from_atm atmospheric air temperature received from atmosphere (pre-downscaling) K F
- 901 U10 10-m wind m/s T
- 902 U10_DUST 10-m wind for dust model m/s T
- 903 U10_ICE 10-m wind (ice landunits only) m/s F
- 904 UAF canopy air speed m/s F
- 905 UM wind speed plus stability effect m/s F
- 906 URBAN_AC urban air conditioning flux W/m^2 T
- 907 URBAN_HEAT urban heating flux W/m^2 T
- 908 USTAR aerodynamical resistance s/m F
- 909 UST_LAKE friction velocity (lakes only) m/s F
- 910 VA atmospheric wind speed plus convective velocity m/s F
- 911 VOLR river channel total water storage m3 T
- 912 VOLRMCH river channel main channel water storage m3 T
- 913 VPD vpd Pa F
- 914 VPD2M 2m vapor pressure deficit Pa T
- 915 VPD_CAN canopy vapor pressure deficit kPa T
- 916 WASTEHEAT sensible heat flux from heating/cooling sources of urban waste heat W/m^2 T
- 917 WBT 2 m Stull Wet Bulb C T
- 918 WBT_R Rural 2 m Stull Wet Bulb C T
- 919 WBT_U Urban 2 m Stull Wet Bulb C T
- 920 WIND atmospheric wind velocity magnitude m/s T
- 921 WOOD_PRODUCT Total wood product from logging gC/m2 F
- 922 WTGQ surface tracer conductance m/s T
- 923 W_SCALAR Moisture (dryness) inhibition of decomposition unitless T
- 924 Wind atmospheric wind velocity magnitude m/s F
- 925 YESTERDAYCANLEV_CANOPY_SCLS Yesterdays canopy level for canopy plants by size class indiv/ha F
- 926 YESTERDAYCANLEV_UNDERSTORY_SCLS Yesterdays canopy level for understory plants by size class indiv/ha F
- 927 Z0HG roughness length over ground, sensible heat m F
- 928 Z0M momentum roughness length m F
- 929 Z0MG roughness length over ground, momentum m F
- 930 Z0M_TO_COUPLER roughness length, momentum: gridcell average sent to coupler m F
- 931 Z0QG roughness length over ground, latent heat m F
- 932 ZBOT atmospheric reference height m T
- 933 ZETA dimensionless stability parameter unitless F
- 934 ZII convective boundary height m F
- 935 ZSTAR_BY_AGE product of zstar and patch area by age bin (divide by PATCH_AREA_BY_AGE to get mean zstar) m F
- 936 ZWT water table depth (natural vegetated and crop landunits only) m T
- 937 ZWT_CH4_UNSAT depth of water table for methane production used in non-inundated area m T
- 938 ZWT_PERCH perched water table depth (natural vegetated and crop landunits only) m T
- 939 num_iter number of iterations unitless F
-==== =================================== ============================================================================================== ================================================================= =======
diff --git a/doc/source/users_guide/setting-up-and-running-a-case/master_list_nofates.rst b/doc/source/users_guide/setting-up-and-running-a-case/master_list_nofates.rst
deleted file mode 100644
index 979b13d697..0000000000
--- a/doc/source/users_guide/setting-up-and-running-a-case/master_list_nofates.rst
+++ /dev/null
@@ -1,1315 +0,0 @@
-=============================
-CTSM History Fields (nofates)
-=============================
-
-CAUTION: Not all variables are relevant / present for all CTSM cases.
-Key flags used in this CTSM case:
-use_cn = T
-use_crop = T
-use_fates = F
-
-==== =================================== ============================================================================================== ================================================================= =======
-CTSM History Fields
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
- # Variable Name Long Description Units Active?
-==== =================================== ============================================================================================== ================================================================= =======
- 1 A10TMIN 10-day running mean of min 2-m temperature K F
- 2 A5TMIN 5-day running mean of min 2-m temperature K F
- 3 ACTUAL_IMMOB actual N immobilization gN/m^2/s T
- 4 ACTUAL_IMMOB_NH4 immobilization of NH4 gN/m^3/s F
- 5 ACTUAL_IMMOB_NO3 immobilization of NO3 gN/m^3/s F
- 6 ACTUAL_IMMOB_vr actual N immobilization gN/m^3/s F
- 7 ACT_SOMC ACT_SOM C gC/m^2 T
- 8 ACT_SOMC_1m ACT_SOM C to 1 meter gC/m^2 F
- 9 ACT_SOMC_TNDNCY_VERT_TRA active soil organic C tendency due to vertical transport gC/m^3/s F
- 10 ACT_SOMC_TO_PAS_SOMC decomp. of active soil organic C to passive soil organic C gC/m^2/s F
- 11 ACT_SOMC_TO_PAS_SOMC_vr decomp. of active soil organic C to passive soil organic C gC/m^3/s F
- 12 ACT_SOMC_TO_SLO_SOMC decomp. of active soil organic C to slow soil organic ma C gC/m^2/s F
- 13 ACT_SOMC_TO_SLO_SOMC_vr decomp. of active soil organic C to slow soil organic ma C gC/m^3/s F
- 14 ACT_SOMC_vr ACT_SOM C (vertically resolved) gC/m^3 T
- 15 ACT_SOMN ACT_SOM N gN/m^2 T
- 16 ACT_SOMN_1m ACT_SOM N to 1 meter gN/m^2 F
- 17 ACT_SOMN_TNDNCY_VERT_TRA active soil organic N tendency due to vertical transport gN/m^3/s F
- 18 ACT_SOMN_TO_PAS_SOMN decomp. of active soil organic N to passive soil organic N gN/m^2 F
- 19 ACT_SOMN_TO_PAS_SOMN_vr decomp. of active soil organic N to passive soil organic N gN/m^3 F
- 20 ACT_SOMN_TO_SLO_SOMN decomp. of active soil organic N to slow soil organic ma N gN/m^2 F
- 21 ACT_SOMN_TO_SLO_SOMN_vr decomp. of active soil organic N to slow soil organic ma N gN/m^3 F
- 22 ACT_SOMN_vr ACT_SOM N (vertically resolved) gN/m^3 T
- 23 ACT_SOM_HR_S2 Het. Resp. from active soil organic gC/m^2/s F
- 24 ACT_SOM_HR_S2_vr Het. Resp. from active soil organic gC/m^3/s F
- 25 ACT_SOM_HR_S3 Het. Resp. from active soil organic gC/m^2/s F
- 26 ACT_SOM_HR_S3_vr Het. Resp. from active soil organic gC/m^3/s F
- 27 AGLB Aboveground leaf biomass kg/m^2 F
- 28 AGNPP aboveground NPP gC/m^2/s T
- 29 AGSB Aboveground stem biomass kg/m^2 F
- 30 ALBD surface albedo (direct) proportion T
- 31 ALBDSF diagnostic snow-free surface albedo (direct) proportion T
- 32 ALBGRD ground albedo (direct) proportion F
- 33 ALBGRI ground albedo (indirect) proportion F
- 34 ALBI surface albedo (indirect) proportion T
- 35 ALBISF diagnostic snow-free surface albedo (indirect) proportion T
- 36 ALPHA alpha coefficient for VOC calc non F
- 37 ALT current active layer thickness m T
- 38 ALTMAX maximum annual active layer thickness m T
- 39 ALTMAX_LASTYEAR maximum prior year active layer thickness m F
- 40 ANNAVG_T2M annual average 2m air temperature K F
- 41 ANNMAX_RETRANSN annual max of retranslocated N pool gN/m^2 F
- 42 ANNSUM_COUNTER seconds since last annual accumulator turnover s F
- 43 ANNSUM_NPP annual sum of NPP gC/m^2/yr F
- 44 ANNSUM_POTENTIAL_GPP annual sum of potential GPP gN/m^2/yr F
- 45 APPAR_TEMP 2 m apparent temperature C T
- 46 APPAR_TEMP_R Rural 2 m apparent temperature C T
- 47 APPAR_TEMP_U Urban 2 m apparent temperature C T
- 48 AR autotrophic respiration (MR + GR) gC/m^2/s T
- 49 ATM_TOPO atmospheric surface height m T
- 50 AVAILC C flux available for allocation gC/m^2/s F
- 51 AVAIL_RETRANSN N flux available from retranslocation pool gN/m^2/s F
- 52 AnnET Annual ET mm/s F
- 53 BAF_CROP fractional area burned for crop s-1 T
- 54 BAF_PEATF fractional area burned in peatland s-1 T
- 55 BCDEP total BC deposition (dry+wet) from atmosphere kg/m^2/s T
- 56 BETA coefficient of convective velocity none F
- 57 BGLFR background litterfall rate 1/s F
- 58 BGNPP belowground NPP gC/m^2/s T
- 59 BGTR background transfer growth rate 1/s F
- 60 BTRANMN daily minimum of transpiration beta factor unitless T
- 61 CANNAVG_T2M annual average of 2m air temperature K F
- 62 CANNSUM_NPP annual sum of column-level NPP gC/m^2/s F
- 63 CEL_LITC CEL_LIT C gC/m^2 T
- 64 CEL_LITC_1m CEL_LIT C to 1 meter gC/m^2 F
- 65 CEL_LITC_TNDNCY_VERT_TRA cellulosic litter C tendency due to vertical transport gC/m^3/s F
- 66 CEL_LITC_TO_ACT_SOMC decomp. of cellulosic litter C to active soil organic C gC/m^2/s F
- 67 CEL_LITC_TO_ACT_SOMC_vr decomp. of cellulosic litter C to active soil organic C gC/m^3/s F
- 68 CEL_LITC_vr CEL_LIT C (vertically resolved) gC/m^3 T
- 69 CEL_LITN CEL_LIT N gN/m^2 T
- 70 CEL_LITN_1m CEL_LIT N to 1 meter gN/m^2 F
- 71 CEL_LITN_TNDNCY_VERT_TRA cellulosic litter N tendency due to vertical transport gN/m^3/s F
- 72 CEL_LITN_TO_ACT_SOMN decomp. of cellulosic litter N to active soil organic N gN/m^2 F
- 73 CEL_LITN_TO_ACT_SOMN_vr decomp. of cellulosic litter N to active soil organic N gN/m^3 F
- 74 CEL_LITN_vr CEL_LIT N (vertically resolved) gN/m^3 T
- 75 CEL_LIT_HR Het. Resp. from cellulosic litter gC/m^2/s F
- 76 CEL_LIT_HR_vr Het. Resp. from cellulosic litter gC/m^3/s F
- 77 CGRND deriv. of soil energy flux wrt to soil temp W/m^2/K F
- 78 CGRNDL deriv. of soil latent heat flux wrt soil temp W/m^2/K F
- 79 CGRNDS deriv. of soil sensible heat flux wrt soil temp W/m^2/K F
- 80 CH4PROD Gridcell total production of CH4 gC/m2/s T
- 81 CH4_EBUL_TOTAL_SAT ebullition surface CH4 flux; (+ to atm) mol/m2/s F
- 82 CH4_EBUL_TOTAL_UNSAT ebullition surface CH4 flux; (+ to atm) mol/m2/s F
- 83 CH4_SURF_AERE_SAT aerenchyma surface CH4 flux for inundated area; (+ to atm) mol/m2/s T
- 84 CH4_SURF_AERE_UNSAT aerenchyma surface CH4 flux for non-inundated area; (+ to atm) mol/m2/s T
- 85 CH4_SURF_DIFF_SAT diffusive surface CH4 flux for inundated / lake area; (+ to atm) mol/m2/s T
- 86 CH4_SURF_DIFF_UNSAT diffusive surface CH4 flux for non-inundated area; (+ to atm) mol/m2/s T
- 87 CH4_SURF_EBUL_SAT ebullition surface CH4 flux for inundated / lake area; (+ to atm) mol/m2/s T
- 88 CH4_SURF_EBUL_UNSAT ebullition surface CH4 flux for non-inundated area; (+ to atm) mol/m2/s T
- 89 COL_CTRUNC column-level sink for C truncation gC/m^2 F
- 90 COL_FIRE_CLOSS total column-level fire C loss for non-peat fires outside land-type converted region gC/m^2/s T
- 91 COL_FIRE_NLOSS total column-level fire N loss gN/m^2/s T
- 92 COL_NTRUNC column-level sink for N truncation gN/m^2 F
- 93 CONC_CH4_SAT CH4 soil Concentration for inundated / lake area mol/m3 F
- 94 CONC_CH4_UNSAT CH4 soil Concentration for non-inundated area mol/m3 F
- 95 CONC_O2_SAT O2 soil Concentration for inundated / lake area mol/m3 T
- 96 CONC_O2_UNSAT O2 soil Concentration for non-inundated area mol/m3 T
- 97 COST_NACTIVE Cost of active uptake gN/gC T
- 98 COST_NFIX Cost of fixation gN/gC T
- 99 COST_NRETRANS Cost of retranslocation gN/gC T
- 100 COSZEN cosine of solar zenith angle none F
- 101 CPHASE crop phenology phase 0-not planted, 1-planted, 2-leaf emerge, 3-grain fill, 4-harvest T
- 102 CPOOL temporary photosynthate C pool gC/m^2 T
- 103 CPOOL_DEADCROOT_GR dead coarse root growth respiration gC/m^2/s F
- 104 CPOOL_DEADCROOT_STORAGE_GR dead coarse root growth respiration to storage gC/m^2/s F
- 105 CPOOL_DEADSTEM_GR dead stem growth respiration gC/m^2/s F
- 106 CPOOL_DEADSTEM_STORAGE_GR dead stem growth respiration to storage gC/m^2/s F
- 107 CPOOL_FROOT_GR fine root growth respiration gC/m^2/s F
- 108 CPOOL_FROOT_STORAGE_GR fine root growth respiration to storage gC/m^2/s F
- 109 CPOOL_LEAF_GR leaf growth respiration gC/m^2/s F
- 110 CPOOL_LEAF_STORAGE_GR leaf growth respiration to storage gC/m^2/s F
- 111 CPOOL_LIVECROOT_GR live coarse root growth respiration gC/m^2/s F
- 112 CPOOL_LIVECROOT_STORAGE_GR live coarse root growth respiration to storage gC/m^2/s F
- 113 CPOOL_LIVESTEM_GR live stem growth respiration gC/m^2/s F
- 114 CPOOL_LIVESTEM_STORAGE_GR live stem growth respiration to storage gC/m^2/s F
- 115 CPOOL_TO_DEADCROOTC allocation to dead coarse root C gC/m^2/s F
- 116 CPOOL_TO_DEADCROOTC_STORAGE allocation to dead coarse root C storage gC/m^2/s F
- 117 CPOOL_TO_DEADSTEMC allocation to dead stem C gC/m^2/s F
- 118 CPOOL_TO_DEADSTEMC_STORAGE allocation to dead stem C storage gC/m^2/s F
- 119 CPOOL_TO_FROOTC allocation to fine root C gC/m^2/s F
- 120 CPOOL_TO_FROOTC_STORAGE allocation to fine root C storage gC/m^2/s F
- 121 CPOOL_TO_GRESP_STORAGE allocation to growth respiration storage gC/m^2/s F
- 122 CPOOL_TO_LEAFC allocation to leaf C gC/m^2/s F
- 123 CPOOL_TO_LEAFC_STORAGE allocation to leaf C storage gC/m^2/s F
- 124 CPOOL_TO_LIVECROOTC allocation to live coarse root C gC/m^2/s F
- 125 CPOOL_TO_LIVECROOTC_STORAGE allocation to live coarse root C storage gC/m^2/s F
- 126 CPOOL_TO_LIVESTEMC allocation to live stem C gC/m^2/s F
- 127 CPOOL_TO_LIVESTEMC_STORAGE allocation to live stem C storage gC/m^2/s F
- 128 CROOT_PROF profile for litter C and N inputs from coarse roots 1/m F
- 129 CROPPROD1C 1-yr crop product (grain+biofuel) C gC/m^2 T
- 130 CROPPROD1C_LOSS loss from 1-yr crop product pool gC/m^2/s T
- 131 CROPPROD1N 1-yr crop product (grain+biofuel) N gN/m^2 T
- 132 CROPPROD1N_LOSS loss from 1-yr crop product pool gN/m^2/s T
- 133 CROPSEEDC_DEFICIT C used for crop seed that needs to be repaid gC/m^2 T
- 134 CROPSEEDN_DEFICIT N used for crop seed that needs to be repaid gN/m^2 F
- 135 CROP_SEEDC_TO_LEAF crop seed source to leaf gC/m^2/s F
- 136 CROP_SEEDN_TO_LEAF crop seed source to leaf gN/m^2/s F
- 137 CURRENT_GR growth resp for new growth displayed in this timestep gC/m^2/s F
- 138 CWDC CWD C gC/m^2 T
- 139 CWDC_1m CWD C to 1 meter gC/m^2 F
- 140 CWDC_HR cwd C heterotrophic respiration gC/m^2/s F
- 141 CWDC_LOSS coarse woody debris C loss gC/m^2/s T
- 142 CWDC_TO_CEL_LITC decomp. of coarse woody debris C to cellulosic litter C gC/m^2/s F
- 143 CWDC_TO_CEL_LITC_vr decomp. of coarse woody debris C to cellulosic litter C gC/m^3/s F
- 144 CWDC_TO_LIG_LITC decomp. of coarse woody debris C to lignin litter C gC/m^2/s F
- 145 CWDC_TO_LIG_LITC_vr decomp. of coarse woody debris C to lignin litter C gC/m^3/s F
- 146 CWDC_vr CWD C (vertically resolved) gC/m^3 T
- 147 CWDN CWD N gN/m^2 T
- 148 CWDN_1m CWD N to 1 meter gN/m^2 F
- 149 CWDN_TO_CEL_LITN decomp. of coarse woody debris N to cellulosic litter N gN/m^2 F
- 150 CWDN_TO_CEL_LITN_vr decomp. of coarse woody debris N to cellulosic litter N gN/m^3 F
- 151 CWDN_TO_LIG_LITN decomp. of coarse woody debris N to lignin litter N gN/m^2 F
- 152 CWDN_TO_LIG_LITN_vr decomp. of coarse woody debris N to lignin litter N gN/m^3 F
- 153 CWDN_vr CWD N (vertically resolved) gN/m^3 T
- 154 CWD_HR_L2 Het. Resp. from coarse woody debris gC/m^2/s F
- 155 CWD_HR_L2_vr Het. Resp. from coarse woody debris gC/m^3/s F
- 156 CWD_HR_L3 Het. Resp. from coarse woody debris gC/m^2/s F
- 157 CWD_HR_L3_vr Het. Resp. from coarse woody debris gC/m^3/s F
- 158 C_ALLOMETRY C allocation index none F
- 159 DAYL daylength s F
- 160 DAYS_ACTIVE number of days since last dormancy days F
- 161 DEADCROOTC dead coarse root C gC/m^2 T
- 162 DEADCROOTC_STORAGE dead coarse root C storage gC/m^2 F
- 163 DEADCROOTC_STORAGE_TO_XFER dead coarse root C shift storage to transfer gC/m^2/s F
- 164 DEADCROOTC_XFER dead coarse root C transfer gC/m^2 F
- 165 DEADCROOTC_XFER_TO_DEADCROOTC dead coarse root C growth from storage gC/m^2/s F
- 166 DEADCROOTN dead coarse root N gN/m^2 T
- 167 DEADCROOTN_STORAGE dead coarse root N storage gN/m^2 F
- 168 DEADCROOTN_STORAGE_TO_XFER dead coarse root N shift storage to transfer gN/m^2/s F
- 169 DEADCROOTN_XFER dead coarse root N transfer gN/m^2 F
- 170 DEADCROOTN_XFER_TO_DEADCROOTN dead coarse root N growth from storage gN/m^2/s F
- 171 DEADSTEMC dead stem C gC/m^2 T
- 172 DEADSTEMC_STORAGE dead stem C storage gC/m^2 F
- 173 DEADSTEMC_STORAGE_TO_XFER dead stem C shift storage to transfer gC/m^2/s F
- 174 DEADSTEMC_XFER dead stem C transfer gC/m^2 F
- 175 DEADSTEMC_XFER_TO_DEADSTEMC dead stem C growth from storage gC/m^2/s F
- 176 DEADSTEMN dead stem N gN/m^2 T
- 177 DEADSTEMN_STORAGE dead stem N storage gN/m^2 F
- 178 DEADSTEMN_STORAGE_TO_XFER dead stem N shift storage to transfer gN/m^2/s F
- 179 DEADSTEMN_XFER dead stem N transfer gN/m^2 F
- 180 DEADSTEMN_XFER_TO_DEADSTEMN dead stem N growth from storage gN/m^2/s F
- 181 DENIT total rate of denitrification gN/m^2/s T
- 182 DGNETDT derivative of net ground heat flux wrt soil temp W/m^2/K F
- 183 DISCOI 2 m Discomfort Index C T
- 184 DISCOIS 2 m Stull Discomfort Index C T
- 185 DISCOIS_R Rural 2 m Stull Discomfort Index C T
- 186 DISCOIS_U Urban 2 m Stull Discomfort Index C T
- 187 DISCOI_R Rural 2 m Discomfort Index C T
- 188 DISCOI_U Urban 2 m Discomfort Index C T
- 189 DISPLA displacement height m F
- 190 DISPVEGC displayed veg carbon, excluding storage and cpool gC/m^2 T
- 191 DISPVEGN displayed vegetation nitrogen gN/m^2 T
- 192 DLRAD downward longwave radiation below the canopy W/m^2 F
- 193 DORMANT_FLAG dormancy flag none F
- 194 DOWNREG fractional reduction in GPP due to N limitation proportion F
- 195 DPVLTRB1 turbulent deposition velocity 1 m/s F
- 196 DPVLTRB2 turbulent deposition velocity 2 m/s F
- 197 DPVLTRB3 turbulent deposition velocity 3 m/s F
- 198 DPVLTRB4 turbulent deposition velocity 4 m/s F
- 199 DSL dry surface layer thickness mm T
- 200 DSTDEP total dust deposition (dry+wet) from atmosphere kg/m^2/s T
- 201 DSTFLXT total surface dust emission kg/m2/s T
- 202 DT_VEG change in t_veg, last iteration K F
- 203 DWT_CONV_CFLUX conversion C flux (immediate loss to atm) (0 at all times except first timestep of year) gC/m^2/s T
- 204 DWT_CONV_CFLUX_DRIBBLED conversion C flux (immediate loss to atm), dribbled throughout the year gC/m^2/s T
- 205 DWT_CONV_CFLUX_PATCH patch-level conversion C flux (immediate loss to atm) (0 at all times except first timestep of gC/m^2/s F
- 206 DWT_CONV_NFLUX conversion N flux (immediate loss to atm) (0 at all times except first timestep of year) gN/m^2/s T
- 207 DWT_CONV_NFLUX_PATCH patch-level conversion N flux (immediate loss to atm) (0 at all times except first timestep of gN/m^2/s F
- 208 DWT_CROPPROD1C_GAIN landcover change-driven addition to 1-year crop product pool gC/m^2/s T
- 209 DWT_CROPPROD1N_GAIN landcover change-driven addition to 1-year crop product pool gN/m^2/s T
- 210 DWT_DEADCROOTC_TO_CWDC dead coarse root to CWD due to landcover change gC/m^2/s F
- 211 DWT_DEADCROOTN_TO_CWDN dead coarse root to CWD due to landcover change gN/m^2/s F
- 212 DWT_FROOTC_TO_CEL_LIT_C fine root to cellulosic litter due to landcover change gC/m^2/s F
- 213 DWT_FROOTC_TO_LIG_LIT_C fine root to lignin litter due to landcover change gC/m^2/s F
- 214 DWT_FROOTC_TO_MET_LIT_C fine root to metabolic litter due to landcover change gC/m^2/s F
- 215 DWT_FROOTN_TO_CEL_LIT_N fine root N to cellulosic litter due to landcover change gN/m^2/s F
- 216 DWT_FROOTN_TO_LIG_LIT_N fine root N to lignin litter due to landcover change gN/m^2/s F
- 217 DWT_FROOTN_TO_MET_LIT_N fine root N to metabolic litter due to landcover change gN/m^2/s F
- 218 DWT_LIVECROOTC_TO_CWDC live coarse root to CWD due to landcover change gC/m^2/s F
- 219 DWT_LIVECROOTN_TO_CWDN live coarse root to CWD due to landcover change gN/m^2/s F
- 220 DWT_PROD100C_GAIN landcover change-driven addition to 100-yr wood product pool gC/m^2/s F
- 221 DWT_PROD100N_GAIN landcover change-driven addition to 100-yr wood product pool gN/m^2/s F
- 222 DWT_PROD10C_GAIN landcover change-driven addition to 10-yr wood product pool gC/m^2/s F
- 223 DWT_PROD10N_GAIN landcover change-driven addition to 10-yr wood product pool gN/m^2/s F
- 224 DWT_SEEDC_TO_DEADSTEM seed source to patch-level deadstem gC/m^2/s F
- 225 DWT_SEEDC_TO_DEADSTEM_PATCH patch-level seed source to patch-level deadstem (per-area-gridcell; only makes sense with dov2 gC/m^2/s F
- 226 DWT_SEEDC_TO_LEAF seed source to patch-level leaf gC/m^2/s F
- 227 DWT_SEEDC_TO_LEAF_PATCH patch-level seed source to patch-level leaf (per-area-gridcell; only makes sense with dov2xy=. gC/m^2/s F
- 228 DWT_SEEDN_TO_DEADSTEM seed source to patch-level deadstem gN/m^2/s T
- 229 DWT_SEEDN_TO_DEADSTEM_PATCH patch-level seed source to patch-level deadstem (per-area-gridcell; only makes sense with dov2 gN/m^2/s F
- 230 DWT_SEEDN_TO_LEAF seed source to patch-level leaf gN/m^2/s T
- 231 DWT_SEEDN_TO_LEAF_PATCH patch-level seed source to patch-level leaf (per-area-gridcell; only makes sense with dov2xy=. gN/m^2/s F
- 232 DWT_SLASH_CFLUX slash C flux (to litter diagnostic only) (0 at all times except first timestep of year) gC/m^2/s T
- 233 DWT_SLASH_CFLUX_PATCH patch-level slash C flux (to litter diagnostic only) (0 at all times except first timestep of gC/m^2/s F
- 234 DWT_WOODPRODC_GAIN landcover change-driven addition to wood product pools gC/m^2/s T
- 235 DWT_WOODPRODN_GAIN landcover change-driven addition to wood product pools gN/m^2/s T
- 236 DWT_WOOD_PRODUCTC_GAIN_PATCH patch-level landcover change-driven addition to wood product pools(0 at all times except first gC/m^2/s F
- 237 DYN_COL_ADJUSTMENTS_CH4 Adjustments in ch4 due to dynamic column areas; only makes sense at the column level: should n gC/m^2 F
- 238 DYN_COL_SOIL_ADJUSTMENTS_C Adjustments in soil carbon due to dynamic column areas; only makes sense at the column level: gC/m^2 F
- 239 DYN_COL_SOIL_ADJUSTMENTS_N Adjustments in soil nitrogen due to dynamic column areas; only makes sense at the column level gN/m^2 F
- 240 DYN_COL_SOIL_ADJUSTMENTS_NH4 Adjustments in soil NH4 due to dynamic column areas; only makes sense at the column level: sho gN/m^2 F
- 241 DYN_COL_SOIL_ADJUSTMENTS_NO3 Adjustments in soil NO3 due to dynamic column areas; only makes sense at the column level: sho gN/m^2 F
- 242 EFF_POROSITY effective porosity = porosity - vol_ice proportion F
- 243 EFLXBUILD building heat flux from change in interior building air temperature W/m^2 T
- 244 EFLX_DYNBAL dynamic land cover change conversion energy flux W/m^2 T
- 245 EFLX_GNET net heat flux into ground W/m^2 F
- 246 EFLX_GRND_LAKE net heat flux into lake/snow surface, excluding light transmission W/m^2 T
- 247 EFLX_LH_TOT total latent heat flux [+ to atm] W/m^2 T
- 248 EFLX_LH_TOT_ICE total latent heat flux [+ to atm] (ice landunits only) W/m^2 F
- 249 EFLX_LH_TOT_R Rural total evaporation W/m^2 T
- 250 EFLX_LH_TOT_U Urban total evaporation W/m^2 F
- 251 EFLX_SOIL_GRND soil heat flux [+ into soil] W/m^2 F
- 252 ELAI exposed one-sided leaf area index m^2/m^2 T
- 253 EMG ground emissivity proportion F
- 254 EMV vegetation emissivity proportion F
- 255 EOPT Eopt coefficient for VOC calc non F
- 256 EPT 2 m Equiv Pot Temp K T
- 257 EPT_R Rural 2 m Equiv Pot Temp K T
- 258 EPT_U Urban 2 m Equiv Pot Temp K T
- 259 ER total ecosystem respiration, autotrophic + heterotrophic gC/m^2/s T
- 260 ERRH2O total water conservation error mm T
- 261 ERRH2OSNO imbalance in snow depth (liquid water) mm T
- 262 ERRSEB surface energy conservation error W/m^2 T
- 263 ERRSOI soil/lake energy conservation error W/m^2 T
- 264 ERRSOL solar radiation conservation error W/m^2 T
- 265 ESAI exposed one-sided stem area index m^2/m^2 T
- 266 EXCESSC_MR excess C maintenance respiration gC/m^2/s F
- 267 EXCESS_CFLUX C flux not allocated due to downregulation gC/m^2/s F
- 268 FAREA_BURNED timestep fractional area burned s-1 T
- 269 FCANSNO fraction of canopy that is wet proportion F
- 270 FCEV canopy evaporation W/m^2 T
- 271 FCH4 Gridcell surface CH4 flux to atmosphere (+ to atm) kgC/m2/s T
- 272 FCH4TOCO2 Gridcell oxidation of CH4 to CO2 gC/m2/s T
- 273 FCH4_DFSAT CH4 additional flux due to changing fsat, natural vegetated and crop landunits only kgC/m2/s T
- 274 FCO2 CO2 flux to atmosphere (+ to atm) kgCO2/m2/s F
- 275 FCOV fractional impermeable area unitless T
- 276 FCTR canopy transpiration W/m^2 T
- 277 FDRY fraction of foliage that is green and dry proportion F
- 278 FERTNITRO Nitrogen fertilizer for each crop gN/m2/yr F
- 279 FERT_COUNTER time left to fertilize seconds F
- 280 FERT_TO_SMINN fertilizer to soil mineral N gN/m^2/s F
- 281 FFIX_TO_SMINN free living N fixation to soil mineral N gN/m^2/s T
- 282 FGEV ground evaporation W/m^2 T
- 283 FGR heat flux into soil/snow including snow melt and lake / snow light transmission W/m^2 T
- 284 FGR12 heat flux between soil layers 1 and 2 W/m^2 T
- 285 FGR_ICE heat flux into soil/snow including snow melt and lake / snow light transmission (ice landunits W/m^2 F
- 286 FGR_R Rural heat flux into soil/snow including snow melt and snow light transmission W/m^2 F
- 287 FGR_SOIL_R Rural downward heat flux at interface below each soil layer watt/m^2 F
- 288 FGR_U Urban heat flux into soil/snow including snow melt W/m^2 F
- 289 FH2OSFC fraction of ground covered by surface water unitless T
- 290 FH2OSFC_NOSNOW fraction of ground covered by surface water (if no snow present) unitless F
- 291 FINUNDATED fractional inundated area of vegetated columns unitless T
- 292 FINUNDATED_LAG time-lagged inundated fraction of vegetated columns unitless F
- 293 FIRA net infrared (longwave) radiation W/m^2 T
- 294 FIRA_ICE net infrared (longwave) radiation (ice landunits only) W/m^2 F
- 295 FIRA_R Rural net infrared (longwave) radiation W/m^2 T
- 296 FIRA_U Urban net infrared (longwave) radiation W/m^2 F
- 297 FIRE emitted infrared (longwave) radiation W/m^2 T
- 298 FIRE_ICE emitted infrared (longwave) radiation (ice landunits only) W/m^2 F
- 299 FIRE_R Rural emitted infrared (longwave) radiation W/m^2 T
- 300 FIRE_U Urban emitted infrared (longwave) radiation W/m^2 F
- 301 FLDS atmospheric longwave radiation (downscaled to columns in glacier regions) W/m^2 T
- 302 FLDS_ICE atmospheric longwave radiation (downscaled to columns in glacier regions) (ice landunits only) W/m^2 F
- 303 FMAX_DENIT_CARBONSUBSTRATE FMAX_DENIT_CARBONSUBSTRATE gN/m^3/s F
- 304 FMAX_DENIT_NITRATE FMAX_DENIT_NITRATE gN/m^3/s F
- 305 FPI fraction of potential immobilization proportion T
- 306 FPI_vr fraction of potential immobilization proportion F
- 307 FPSN photosynthesis umol m-2 s-1 T
- 308 FPSN24 24 hour accumulative patch photosynthesis starting from mid-night umol CO2/m^2 ground/day F
- 309 FPSN_WC Rubisco-limited photosynthesis umol m-2 s-1 F
- 310 FPSN_WJ RuBP-limited photosynthesis umol m-2 s-1 F
- 311 FPSN_WP Product-limited photosynthesis umol m-2 s-1 F
- 312 FRAC_ICEOLD fraction of ice relative to the tot water proportion F
- 313 FREE_RETRANSN_TO_NPOOL deployment of retranslocated N gN/m^2/s T
- 314 FROOTC fine root C gC/m^2 T
- 315 FROOTC_ALLOC fine root C allocation gC/m^2/s T
- 316 FROOTC_LOSS fine root C loss gC/m^2/s T
- 317 FROOTC_STORAGE fine root C storage gC/m^2 F
- 318 FROOTC_STORAGE_TO_XFER fine root C shift storage to transfer gC/m^2/s F
- 319 FROOTC_TO_LITTER fine root C litterfall gC/m^2/s F
- 320 FROOTC_XFER fine root C transfer gC/m^2 F
- 321 FROOTC_XFER_TO_FROOTC fine root C growth from storage gC/m^2/s F
- 322 FROOTN fine root N gN/m^2 T
- 323 FROOTN_STORAGE fine root N storage gN/m^2 F
- 324 FROOTN_STORAGE_TO_XFER fine root N shift storage to transfer gN/m^2/s F
- 325 FROOTN_TO_LITTER fine root N litterfall gN/m^2/s F
- 326 FROOTN_XFER fine root N transfer gN/m^2 F
- 327 FROOTN_XFER_TO_FROOTN fine root N growth from storage gN/m^2/s F
- 328 FROOT_MR fine root maintenance respiration gC/m^2/s F
- 329 FROOT_PROF profile for litter C and N inputs from fine roots 1/m F
- 330 FROST_TABLE frost table depth (natural vegetated and crop landunits only) m F
- 331 FSA absorbed solar radiation W/m^2 T
- 332 FSAT fractional area with water table at surface unitless T
- 333 FSA_ICE absorbed solar radiation (ice landunits only) W/m^2 F
- 334 FSA_R Rural absorbed solar radiation W/m^2 F
- 335 FSA_U Urban absorbed solar radiation W/m^2 F
- 336 FSD24 direct radiation (last 24hrs) K F
- 337 FSD240 direct radiation (last 240hrs) K F
- 338 FSDS atmospheric incident solar radiation W/m^2 T
- 339 FSDSND direct nir incident solar radiation W/m^2 T
- 340 FSDSNDLN direct nir incident solar radiation at local noon W/m^2 T
- 341 FSDSNI diffuse nir incident solar radiation W/m^2 T
- 342 FSDSVD direct vis incident solar radiation W/m^2 T
- 343 FSDSVDLN direct vis incident solar radiation at local noon W/m^2 T
- 344 FSDSVI diffuse vis incident solar radiation W/m^2 T
- 345 FSDSVILN diffuse vis incident solar radiation at local noon W/m^2 T
- 346 FSH sensible heat not including correction for land use change and rain/snow conversion W/m^2 T
- 347 FSH_G sensible heat from ground W/m^2 T
- 348 FSH_ICE sensible heat not including correction for land use change and rain/snow conversion (ice landu W/m^2 F
- 349 FSH_PRECIP_CONVERSION Sensible heat flux from conversion of rain/snow atm forcing W/m^2 T
- 350 FSH_R Rural sensible heat W/m^2 T
- 351 FSH_RUNOFF_ICE_TO_LIQ sensible heat flux generated from conversion of ice runoff to liquid W/m^2 T
- 352 FSH_TO_COUPLER sensible heat sent to coupler (includes corrections for land use change, rain/snow conversion W/m^2 T
- 353 FSH_U Urban sensible heat W/m^2 F
- 354 FSH_V sensible heat from veg W/m^2 T
- 355 FSI24 indirect radiation (last 24hrs) K F
- 356 FSI240 indirect radiation (last 240hrs) K F
- 357 FSM snow melt heat flux W/m^2 T
- 358 FSM_ICE snow melt heat flux (ice landunits only) W/m^2 F
- 359 FSM_R Rural snow melt heat flux W/m^2 F
- 360 FSM_U Urban snow melt heat flux W/m^2 F
- 361 FSNO fraction of ground covered by snow unitless T
- 362 FSNO_EFF effective fraction of ground covered by snow unitless T
- 363 FSNO_ICE fraction of ground covered by snow (ice landunits only) unitless F
- 364 FSR reflected solar radiation W/m^2 T
- 365 FSRND direct nir reflected solar radiation W/m^2 T
- 366 FSRNDLN direct nir reflected solar radiation at local noon W/m^2 T
- 367 FSRNI diffuse nir reflected solar radiation W/m^2 T
- 368 FSRSF reflected solar radiation W/m^2 T
- 369 FSRSFND direct nir reflected solar radiation W/m^2 T
- 370 FSRSFNDLN direct nir reflected solar radiation at local noon W/m^2 T
- 371 FSRSFNI diffuse nir reflected solar radiation W/m^2 T
- 372 FSRSFVD direct vis reflected solar radiation W/m^2 T
- 373 FSRSFVDLN direct vis reflected solar radiation at local noon W/m^2 T
- 374 FSRSFVI diffuse vis reflected solar radiation W/m^2 T
- 375 FSRVD direct vis reflected solar radiation W/m^2 T
- 376 FSRVDLN direct vis reflected solar radiation at local noon W/m^2 T
- 377 FSRVI diffuse vis reflected solar radiation W/m^2 T
- 378 FSR_ICE reflected solar radiation (ice landunits only) W/m^2 F
- 379 FSUN sunlit fraction of canopy proportion F
- 380 FSUN24 fraction sunlit (last 24hrs) K F
- 381 FSUN240 fraction sunlit (last 240hrs) K F
- 382 FUELC fuel load gC/m^2 T
- 383 FV friction velocity m/s T
- 384 FWET fraction of canopy that is wet proportion F
- 385 F_DENIT denitrification flux gN/m^2/s T
- 386 F_DENIT_BASE F_DENIT_BASE gN/m^3/s F
- 387 F_DENIT_vr denitrification flux gN/m^3/s F
- 388 F_N2O_DENIT denitrification N2O flux gN/m^2/s T
- 389 F_N2O_NIT nitrification N2O flux gN/m^2/s T
- 390 F_NIT nitrification flux gN/m^2/s T
- 391 F_NIT_vr nitrification flux gN/m^3/s F
- 392 FireComp_BC fire emissions flux of BC kg/m2/sec F
- 393 FireComp_OC fire emissions flux of OC kg/m2/sec F
- 394 FireComp_SO2 fire emissions flux of SO2 kg/m2/sec F
- 395 FireEmis_TOT Total fire emissions flux gC/m2/sec F
- 396 FireEmis_ZTOP Top of vertical fire emissions distribution m F
- 397 FireMech_SO2 fire emissions flux of SO2 kg/m2/sec F
- 398 FireMech_bc_a1 fire emissions flux of bc_a1 kg/m2/sec F
- 399 FireMech_pom_a1 fire emissions flux of pom_a1 kg/m2/sec F
- 400 GAMMA total gamma for VOC calc non F
- 401 GAMMAA gamma A for VOC calc non F
- 402 GAMMAC gamma C for VOC calc non F
- 403 GAMMAL gamma L for VOC calc non F
- 404 GAMMAP gamma P for VOC calc non F
- 405 GAMMAS gamma S for VOC calc non F
- 406 GAMMAT gamma T for VOC calc non F
- 407 GDD0 Growing degree days base 0C from planting ddays F
- 408 GDD020 Twenty year average of growing degree days base 0C from planting ddays F
- 409 GDD10 Growing degree days base 10C from planting ddays F
- 410 GDD1020 Twenty year average of growing degree days base 10C from planting ddays F
- 411 GDD8 Growing degree days base 8C from planting ddays F
- 412 GDD820 Twenty year average of growing degree days base 8C from planting ddays F
- 413 GDDACCUM Accumulated growing degree days past planting date for crop ddays F
- 414 GDDACCUM_PERHARV For each crop harvest in a calendar year, accumulated growing degree days past planting date ddays F
- 415 GDDHARV Growing degree days (gdd) needed to harvest ddays F
- 416 GDDHARV_PERHARV For each harvest in a calendar year,For each harvest in a calendar year, growing degree days (gdd) needed to harvest ddays F
- 417 GDDTSOI Growing degree-days from planting (top two soil layers) ddays F
- 418 GPP gross primary production gC/m^2/s T
- 419 GR total growth respiration gC/m^2/s T
- 420 GRAINC grain C (does not equal yield) gC/m^2 T
- 421 GRAINC_TO_FOOD grain C to food gC/m^2/s T
- 422 GRAINC_TO_FOOD_ANN total grain C to food in all harvests in a calendar year gC/m^2 F
- 423 GRAINC_TO_FOOD_PERHARV grain C to food for each harvest in a calendar year gC/m^2 F
- 424 GRAINC_TO_SEED grain C to seed gC/m^2/s T
- 425 GRAINN grain N gN/m^2 T
- 426 GRESP_STORAGE growth respiration storage gC/m^2 F
- 427 GRESP_STORAGE_TO_XFER growth respiration shift storage to transfer gC/m^2/s F
- 428 GRESP_XFER growth respiration transfer gC/m^2 F
- 429 GROSS_NMIN gross rate of N mineralization gN/m^2/s T
- 430 GROSS_NMIN_vr gross rate of N mineralization gN/m^3/s F
- 431 GSSHA shaded leaf stomatal conductance umol H20/m2/s T
- 432 GSSHALN shaded leaf stomatal conductance at local noon umol H20/m2/s T
- 433 GSSUN sunlit leaf stomatal conductance umol H20/m2/s T
- 434 GSSUNLN sunlit leaf stomatal conductance at local noon umol H20/m2/s T
- 435 H2OCAN intercepted water mm T
- 436 H2OSFC surface water depth mm T
- 437 H2OSNO snow depth (liquid water) mm T
- 438 H2OSNO_ICE snow depth (liquid water, ice landunits only) mm F
- 439 H2OSNO_TOP mass of snow in top snow layer kg/m2 T
- 440 H2OSOI volumetric soil water (natural vegetated and crop landunits only) mm3/mm3 T
- 441 HARVEST_REASON_PERHARV For each harvest in a calendar year, the reason the crop was harvested categorical F
- 442 HBOT canopy bottom m F
- 443 HEAT_CONTENT1 initial gridcell total heat content J/m^2 T
- 444 HEAT_CONTENT1_VEG initial gridcell total heat content - natural vegetated and crop landunits only J/m^2 F
- 445 HEAT_CONTENT2 post land cover change total heat content J/m^2 F
- 446 HEAT_FROM_AC sensible heat flux put into canyon due to heat removed from air conditioning W/m^2 T
- 447 HIA 2 m NWS Heat Index C T
- 448 HIA_R Rural 2 m NWS Heat Index C T
- 449 HIA_U Urban 2 m NWS Heat Index C T
- 450 HK hydraulic conductivity (natural vegetated and crop landunits only) mm/s F
- 451 HR total heterotrophic respiration gC/m^2/s T
- 452 HR_vr total vertically resolved heterotrophic respiration gC/m^3/s T
- 453 HTOP canopy top m T
- 454 HUI crop heat unit index ddays F
- 455 HUI_PERHARV For each harvest in a calendar year, crop heat unit index ddays F
- 456 HUMIDEX 2 m Humidex C T
- 457 HUMIDEX_R Rural 2 m Humidex C T
- 458 HUMIDEX_U Urban 2 m Humidex C T
- 459 ICE_CONTENT1 initial gridcell total ice content mm T
- 460 ICE_CONTENT2 post land cover change total ice content mm F
- 461 ICE_MODEL_FRACTION Ice sheet model fractional coverage unitless F
- 462 INIT_GPP GPP flux before downregulation gC/m^2/s F
- 463 INT_SNOW accumulated swe (natural vegetated and crop landunits only) mm F
- 464 INT_SNOW_ICE accumulated swe (ice landunits only) mm F
- 465 IWUELN local noon intrinsic water use efficiency umolCO2/molH2O T
- 466 JMX25T canopy profile of jmax umol/m2/s T
- 467 Jmx25Z maximum rate of electron transport at 25 Celcius for canopy layers umol electrons/m2/s T
- 468 KROOT root conductance each soil layer 1/s F
- 469 KSOIL soil conductance in each soil layer 1/s F
- 470 K_ACT_SOM active soil organic potential loss coefficient 1/s F
- 471 K_CEL_LIT cellulosic litter potential loss coefficient 1/s F
- 472 K_CWD coarse woody debris potential loss coefficient 1/s F
- 473 K_LIG_LIT lignin litter potential loss coefficient 1/s F
- 474 K_MET_LIT metabolic litter potential loss coefficient 1/s F
- 475 K_NITR K_NITR 1/s F
- 476 K_NITR_H2O K_NITR_H2O unitless F
- 477 K_NITR_PH K_NITR_PH unitless F
- 478 K_NITR_T K_NITR_T unitless F
- 479 K_PAS_SOM passive soil organic potential loss coefficient 1/s F
- 480 K_SLO_SOM slow soil organic ma potential loss coefficient 1/s F
- 481 LAI240 240hr average of leaf area index m^2/m^2 F
- 482 LAISHA shaded projected leaf area index m^2/m^2 T
- 483 LAISUN sunlit projected leaf area index m^2/m^2 T
- 484 LAKEICEFRAC lake layer ice mass fraction unitless F
- 485 LAKEICEFRAC_SURF surface lake layer ice mass fraction unitless T
- 486 LAKEICETHICK thickness of lake ice (including physical expansion on freezing) m T
- 487 LAND_USE_FLUX total C emitted from land cover conversion (smoothed over the year) and wood and grain product gC/m^2/s T
- 488 LATBASET latitude vary base temperature for gddplant degree C F
- 489 LEAFC leaf C gC/m^2 T
- 490 LEAFCN Leaf CN ratio used for flexible CN gC/gN T
- 491 LEAFCN_OFFSET Leaf C:N used by FUN unitless F
- 492 LEAFCN_STORAGE Storage Leaf CN ratio used for flexible CN gC/gN F
- 493 LEAFC_ALLOC leaf C allocation gC/m^2/s T
- 494 LEAFC_CHANGE C change in leaf gC/m^2/s T
- 495 LEAFC_LOSS leaf C loss gC/m^2/s T
- 496 LEAFC_STORAGE leaf C storage gC/m^2 F
- 497 LEAFC_STORAGE_TO_XFER leaf C shift storage to transfer gC/m^2/s F
- 498 LEAFC_STORAGE_XFER_ACC Accumulated leaf C transfer gC/m^2 F
- 499 LEAFC_TO_BIOFUELC leaf C to biofuel C gC/m^2/s T
- 500 LEAFC_TO_LITTER leaf C litterfall gC/m^2/s F
- 501 LEAFC_TO_LITTER_FUN leaf C litterfall used by FUN gC/m^2/s T
- 502 LEAFC_XFER leaf C transfer gC/m^2 F
- 503 LEAFC_XFER_TO_LEAFC leaf C growth from storage gC/m^2/s F
- 504 LEAFN leaf N gN/m^2 T
- 505 LEAFN_STORAGE leaf N storage gN/m^2 F
- 506 LEAFN_STORAGE_TO_XFER leaf N shift storage to transfer gN/m^2/s F
- 507 LEAFN_STORAGE_XFER_ACC Accmulated leaf N transfer gN/m^2 F
- 508 LEAFN_TO_LITTER leaf N litterfall gN/m^2/s T
- 509 LEAFN_TO_RETRANSN leaf N to retranslocated N pool gN/m^2/s F
- 510 LEAFN_XFER leaf N transfer gN/m^2 F
- 511 LEAFN_XFER_TO_LEAFN leaf N growth from storage gN/m^2/s F
- 512 LEAF_MR leaf maintenance respiration gC/m^2/s T
- 513 LEAF_PROF profile for litter C and N inputs from leaves 1/m F
- 514 LFC2 conversion area fraction of BET and BDT that burned per sec T
- 515 LGSF long growing season factor proportion F
- 516 LIG_LITC LIG_LIT C gC/m^2 T
- 517 LIG_LITC_1m LIG_LIT C to 1 meter gC/m^2 F
- 518 LIG_LITC_TNDNCY_VERT_TRA lignin litter C tendency due to vertical transport gC/m^3/s F
- 519 LIG_LITC_TO_SLO_SOMC decomp. of lignin litter C to slow soil organic ma C gC/m^2/s F
- 520 LIG_LITC_TO_SLO_SOMC_vr decomp. of lignin litter C to slow soil organic ma C gC/m^3/s F
- 521 LIG_LITC_vr LIG_LIT C (vertically resolved) gC/m^3 T
- 522 LIG_LITN LIG_LIT N gN/m^2 T
- 523 LIG_LITN_1m LIG_LIT N to 1 meter gN/m^2 F
- 524 LIG_LITN_TNDNCY_VERT_TRA lignin litter N tendency due to vertical transport gN/m^3/s F
- 525 LIG_LITN_TO_SLO_SOMN decomp. of lignin litter N to slow soil organic ma N gN/m^2 F
- 526 LIG_LITN_TO_SLO_SOMN_vr decomp. of lignin litter N to slow soil organic ma N gN/m^3 F
- 527 LIG_LITN_vr LIG_LIT N (vertically resolved) gN/m^3 T
- 528 LIG_LIT_HR Het. Resp. from lignin litter gC/m^2/s F
- 529 LIG_LIT_HR_vr Het. Resp. from lignin litter gC/m^3/s F
- 530 LIQCAN intercepted liquid water mm T
- 531 LIQUID_CONTENT1 initial gridcell total liq content mm T
- 532 LIQUID_CONTENT2 post landuse change gridcell total liq content mm F
- 533 LIQUID_WATER_TEMP1 initial gridcell weighted average liquid water temperature K F
- 534 LITFALL litterfall (leaves and fine roots) gC/m^2/s T
- 535 LITFIRE litter fire losses gC/m^2/s F
- 536 LITTERC_HR litter C heterotrophic respiration gC/m^2/s T
- 537 LITTERC_LOSS litter C loss gC/m^2/s T
- 538 LIVECROOTC live coarse root C gC/m^2 T
- 539 LIVECROOTC_STORAGE live coarse root C storage gC/m^2 F
- 540 LIVECROOTC_STORAGE_TO_XFER live coarse root C shift storage to transfer gC/m^2/s F
- 541 LIVECROOTC_TO_DEADCROOTC live coarse root C turnover gC/m^2/s F
- 542 LIVECROOTC_XFER live coarse root C transfer gC/m^2 F
- 543 LIVECROOTC_XFER_TO_LIVECROOTC live coarse root C growth from storage gC/m^2/s F
- 544 LIVECROOTN live coarse root N gN/m^2 T
- 545 LIVECROOTN_STORAGE live coarse root N storage gN/m^2 F
- 546 LIVECROOTN_STORAGE_TO_XFER live coarse root N shift storage to transfer gN/m^2/s F
- 547 LIVECROOTN_TO_DEADCROOTN live coarse root N turnover gN/m^2/s F
- 548 LIVECROOTN_TO_RETRANSN live coarse root N to retranslocated N pool gN/m^2/s F
- 549 LIVECROOTN_XFER live coarse root N transfer gN/m^2 F
- 550 LIVECROOTN_XFER_TO_LIVECROOTN live coarse root N growth from storage gN/m^2/s F
- 551 LIVECROOT_MR live coarse root maintenance respiration gC/m^2/s F
- 552 LIVESTEMC live stem C gC/m^2 T
- 553 LIVESTEMC_STORAGE live stem C storage gC/m^2 F
- 554 LIVESTEMC_STORAGE_TO_XFER live stem C shift storage to transfer gC/m^2/s F
- 555 LIVESTEMC_TO_BIOFUELC livestem C to biofuel C gC/m^2/s T
- 556 LIVESTEMC_TO_DEADSTEMC live stem C turnover gC/m^2/s F
- 557 LIVESTEMC_XFER live stem C transfer gC/m^2 F
- 558 LIVESTEMC_XFER_TO_LIVESTEMC live stem C growth from storage gC/m^2/s F
- 559 LIVESTEMN live stem N gN/m^2 T
- 560 LIVESTEMN_STORAGE live stem N storage gN/m^2 F
- 561 LIVESTEMN_STORAGE_TO_XFER live stem N shift storage to transfer gN/m^2/s F
- 562 LIVESTEMN_TO_DEADSTEMN live stem N turnover gN/m^2/s F
- 563 LIVESTEMN_TO_RETRANSN live stem N to retranslocated N pool gN/m^2/s F
- 564 LIVESTEMN_XFER live stem N transfer gN/m^2 F
- 565 LIVESTEMN_XFER_TO_LIVESTEMN live stem N growth from storage gN/m^2/s F
- 566 LIVESTEM_MR live stem maintenance respiration gC/m^2/s F
- 567 LNC leaf N concentration gN leaf/m^2 T
- 568 LWdown atmospheric longwave radiation (downscaled to columns in glacier regions) W/m^2 F
- 569 LWup upwelling longwave radiation W/m^2 F
- 570 MEG_acetaldehyde MEGAN flux kg/m2/sec T
- 571 MEG_acetic_acid MEGAN flux kg/m2/sec T
- 572 MEG_acetone MEGAN flux kg/m2/sec T
- 573 MEG_carene_3 MEGAN flux kg/m2/sec T
- 574 MEG_ethanol MEGAN flux kg/m2/sec T
- 575 MEG_formaldehyde MEGAN flux kg/m2/sec T
- 576 MEG_isoprene MEGAN flux kg/m2/sec T
- 577 MEG_methanol MEGAN flux kg/m2/sec T
- 578 MEG_pinene_a MEGAN flux kg/m2/sec T
- 579 MEG_thujene_a MEGAN flux kg/m2/sec T
- 580 MET_LITC MET_LIT C gC/m^2 T
- 581 MET_LITC_1m MET_LIT C to 1 meter gC/m^2 F
- 582 MET_LITC_TNDNCY_VERT_TRA metabolic litter C tendency due to vertical transport gC/m^3/s F
- 583 MET_LITC_TO_ACT_SOMC decomp. of metabolic litter C to active soil organic C gC/m^2/s F
- 584 MET_LITC_TO_ACT_SOMC_vr decomp. of metabolic litter C to active soil organic C gC/m^3/s F
- 585 MET_LITC_vr MET_LIT C (vertically resolved) gC/m^3 T
- 586 MET_LITN MET_LIT N gN/m^2 T
- 587 MET_LITN_1m MET_LIT N to 1 meter gN/m^2 F
- 588 MET_LITN_TNDNCY_VERT_TRA metabolic litter N tendency due to vertical transport gN/m^3/s F
- 589 MET_LITN_TO_ACT_SOMN decomp. of metabolic litter N to active soil organic N gN/m^2 F
- 590 MET_LITN_TO_ACT_SOMN_vr decomp. of metabolic litter N to active soil organic N gN/m^3 F
- 591 MET_LITN_vr MET_LIT N (vertically resolved) gN/m^3 T
- 592 MET_LIT_HR Het. Resp. from metabolic litter gC/m^2/s F
- 593 MET_LIT_HR_vr Het. Resp. from metabolic litter gC/m^3/s F
- 594 MR maintenance respiration gC/m^2/s T
- 595 M_ACT_SOMC_TO_LEACHING active soil organic C leaching loss gC/m^2/s F
- 596 M_ACT_SOMN_TO_LEACHING active soil organic N leaching loss gN/m^2/s F
- 597 M_CEL_LITC_TO_FIRE cellulosic litter C fire loss gC/m^2/s F
- 598 M_CEL_LITC_TO_FIRE_vr cellulosic litter C fire loss gC/m^3/s F
- 599 M_CEL_LITC_TO_LEACHING cellulosic litter C leaching loss gC/m^2/s F
- 600 M_CEL_LITN_TO_FIRE cellulosic litter N fire loss gN/m^2 F
- 601 M_CEL_LITN_TO_FIRE_vr cellulosic litter N fire loss gN/m^3 F
- 602 M_CEL_LITN_TO_LEACHING cellulosic litter N leaching loss gN/m^2/s F
- 603 M_CWDC_TO_FIRE coarse woody debris C fire loss gC/m^2/s F
- 604 M_CWDC_TO_FIRE_vr coarse woody debris C fire loss gC/m^3/s F
- 605 M_CWDN_TO_FIRE coarse woody debris N fire loss gN/m^2 F
- 606 M_CWDN_TO_FIRE_vr coarse woody debris N fire loss gN/m^3 F
- 607 M_DEADCROOTC_STORAGE_TO_LITTER dead coarse root C storage mortality gC/m^2/s F
- 608 M_DEADCROOTC_STORAGE_TO_LITTER_FIRE dead coarse root C storage fire mortality to litter gC/m^2/s F
- 609 M_DEADCROOTC_TO_LITTER dead coarse root C mortality gC/m^2/s F
- 610 M_DEADCROOTC_XFER_TO_LITTER dead coarse root C transfer mortality gC/m^2/s F
- 611 M_DEADCROOTN_STORAGE_TO_FIRE dead coarse root N storage fire loss gN/m^2/s F
- 612 M_DEADCROOTN_STORAGE_TO_LITTER dead coarse root N storage mortality gN/m^2/s F
- 613 M_DEADCROOTN_TO_FIRE dead coarse root N fire loss gN/m^2/s F
- 614 M_DEADCROOTN_TO_LITTER dead coarse root N mortality gN/m^2/s F
- 615 M_DEADCROOTN_TO_LITTER_FIRE dead coarse root N fire mortality to litter gN/m^2/s F
- 616 M_DEADCROOTN_XFER_TO_FIRE dead coarse root N transfer fire loss gN/m^2/s F
- 617 M_DEADCROOTN_XFER_TO_LITTER dead coarse root N transfer mortality gN/m^2/s F
- 618 M_DEADROOTC_STORAGE_TO_FIRE dead root C storage fire loss gC/m^2/s F
- 619 M_DEADROOTC_STORAGE_TO_LITTER_FIRE dead root C storage fire mortality to litter gC/m^2/s F
- 620 M_DEADROOTC_TO_FIRE dead root C fire loss gC/m^2/s F
- 621 M_DEADROOTC_TO_LITTER_FIRE dead root C fire mortality to litter gC/m^2/s F
- 622 M_DEADROOTC_XFER_TO_FIRE dead root C transfer fire loss gC/m^2/s F
- 623 M_DEADROOTC_XFER_TO_LITTER_FIRE dead root C transfer fire mortality to litter gC/m^2/s F
- 624 M_DEADSTEMC_STORAGE_TO_FIRE dead stem C storage fire loss gC/m^2/s F
- 625 M_DEADSTEMC_STORAGE_TO_LITTER dead stem C storage mortality gC/m^2/s F
- 626 M_DEADSTEMC_STORAGE_TO_LITTER_FIRE dead stem C storage fire mortality to litter gC/m^2/s F
- 627 M_DEADSTEMC_TO_FIRE dead stem C fire loss gC/m^2/s F
- 628 M_DEADSTEMC_TO_LITTER dead stem C mortality gC/m^2/s F
- 629 M_DEADSTEMC_TO_LITTER_FIRE dead stem C fire mortality to litter gC/m^2/s F
- 630 M_DEADSTEMC_XFER_TO_FIRE dead stem C transfer fire loss gC/m^2/s F
- 631 M_DEADSTEMC_XFER_TO_LITTER dead stem C transfer mortality gC/m^2/s F
- 632 M_DEADSTEMC_XFER_TO_LITTER_FIRE dead stem C transfer fire mortality to litter gC/m^2/s F
- 633 M_DEADSTEMN_STORAGE_TO_FIRE dead stem N storage fire loss gN/m^2/s F
- 634 M_DEADSTEMN_STORAGE_TO_LITTER dead stem N storage mortality gN/m^2/s F
- 635 M_DEADSTEMN_TO_FIRE dead stem N fire loss gN/m^2/s F
- 636 M_DEADSTEMN_TO_LITTER dead stem N mortality gN/m^2/s F
- 637 M_DEADSTEMN_TO_LITTER_FIRE dead stem N fire mortality to litter gN/m^2/s F
- 638 M_DEADSTEMN_XFER_TO_FIRE dead stem N transfer fire loss gN/m^2/s F
- 639 M_DEADSTEMN_XFER_TO_LITTER dead stem N transfer mortality gN/m^2/s F
- 640 M_FROOTC_STORAGE_TO_FIRE fine root C storage fire loss gC/m^2/s F
- 641 M_FROOTC_STORAGE_TO_LITTER fine root C storage mortality gC/m^2/s F
- 642 M_FROOTC_STORAGE_TO_LITTER_FIRE fine root C storage fire mortality to litter gC/m^2/s F
- 643 M_FROOTC_TO_FIRE fine root C fire loss gC/m^2/s F
- 644 M_FROOTC_TO_LITTER fine root C mortality gC/m^2/s F
- 645 M_FROOTC_TO_LITTER_FIRE fine root C fire mortality to litter gC/m^2/s F
- 646 M_FROOTC_XFER_TO_FIRE fine root C transfer fire loss gC/m^2/s F
- 647 M_FROOTC_XFER_TO_LITTER fine root C transfer mortality gC/m^2/s F
- 648 M_FROOTC_XFER_TO_LITTER_FIRE fine root C transfer fire mortality to litter gC/m^2/s F
- 649 M_FROOTN_STORAGE_TO_FIRE fine root N storage fire loss gN/m^2/s F
- 650 M_FROOTN_STORAGE_TO_LITTER fine root N storage mortality gN/m^2/s F
- 651 M_FROOTN_TO_FIRE fine root N fire loss gN/m^2/s F
- 652 M_FROOTN_TO_LITTER fine root N mortality gN/m^2/s F
- 653 M_FROOTN_XFER_TO_FIRE fine root N transfer fire loss gN/m^2/s F
- 654 M_FROOTN_XFER_TO_LITTER fine root N transfer mortality gN/m^2/s F
- 655 M_GRESP_STORAGE_TO_FIRE growth respiration storage fire loss gC/m^2/s F
- 656 M_GRESP_STORAGE_TO_LITTER growth respiration storage mortality gC/m^2/s F
- 657 M_GRESP_STORAGE_TO_LITTER_FIRE growth respiration storage fire mortality to litter gC/m^2/s F
- 658 M_GRESP_XFER_TO_FIRE growth respiration transfer fire loss gC/m^2/s F
- 659 M_GRESP_XFER_TO_LITTER growth respiration transfer mortality gC/m^2/s F
- 660 M_GRESP_XFER_TO_LITTER_FIRE growth respiration transfer fire mortality to litter gC/m^2/s F
- 661 M_LEAFC_STORAGE_TO_FIRE leaf C storage fire loss gC/m^2/s F
- 662 M_LEAFC_STORAGE_TO_LITTER leaf C storage mortality gC/m^2/s F
- 663 M_LEAFC_STORAGE_TO_LITTER_FIRE leaf C fire mortality to litter gC/m^2/s F
- 664 M_LEAFC_TO_FIRE leaf C fire loss gC/m^2/s F
- 665 M_LEAFC_TO_LITTER leaf C mortality gC/m^2/s F
- 666 M_LEAFC_TO_LITTER_FIRE leaf C fire mortality to litter gC/m^2/s F
- 667 M_LEAFC_XFER_TO_FIRE leaf C transfer fire loss gC/m^2/s F
- 668 M_LEAFC_XFER_TO_LITTER leaf C transfer mortality gC/m^2/s F
- 669 M_LEAFC_XFER_TO_LITTER_FIRE leaf C transfer fire mortality to litter gC/m^2/s F
- 670 M_LEAFN_STORAGE_TO_FIRE leaf N storage fire loss gN/m^2/s F
- 671 M_LEAFN_STORAGE_TO_LITTER leaf N storage mortality gN/m^2/s F
- 672 M_LEAFN_TO_FIRE leaf N fire loss gN/m^2/s F
- 673 M_LEAFN_TO_LITTER leaf N mortality gN/m^2/s F
- 674 M_LEAFN_XFER_TO_FIRE leaf N transfer fire loss gN/m^2/s F
- 675 M_LEAFN_XFER_TO_LITTER leaf N transfer mortality gN/m^2/s F
- 676 M_LIG_LITC_TO_FIRE lignin litter C fire loss gC/m^2/s F
- 677 M_LIG_LITC_TO_FIRE_vr lignin litter C fire loss gC/m^3/s F
- 678 M_LIG_LITC_TO_LEACHING lignin litter C leaching loss gC/m^2/s F
- 679 M_LIG_LITN_TO_FIRE lignin litter N fire loss gN/m^2 F
- 680 M_LIG_LITN_TO_FIRE_vr lignin litter N fire loss gN/m^3 F
- 681 M_LIG_LITN_TO_LEACHING lignin litter N leaching loss gN/m^2/s F
- 682 M_LIVECROOTC_STORAGE_TO_LITTER live coarse root C storage mortality gC/m^2/s F
- 683 M_LIVECROOTC_STORAGE_TO_LITTER_FIRE live coarse root C fire mortality to litter gC/m^2/s F
- 684 M_LIVECROOTC_TO_LITTER live coarse root C mortality gC/m^2/s F
- 685 M_LIVECROOTC_XFER_TO_LITTER live coarse root C transfer mortality gC/m^2/s F
- 686 M_LIVECROOTN_STORAGE_TO_FIRE live coarse root N storage fire loss gN/m^2/s F
- 687 M_LIVECROOTN_STORAGE_TO_LITTER live coarse root N storage mortality gN/m^2/s F
- 688 M_LIVECROOTN_TO_FIRE live coarse root N fire loss gN/m^2/s F
- 689 M_LIVECROOTN_TO_LITTER live coarse root N mortality gN/m^2/s F
- 690 M_LIVECROOTN_XFER_TO_FIRE live coarse root N transfer fire loss gN/m^2/s F
- 691 M_LIVECROOTN_XFER_TO_LITTER live coarse root N transfer mortality gN/m^2/s F
- 692 M_LIVEROOTC_STORAGE_TO_FIRE live root C storage fire loss gC/m^2/s F
- 693 M_LIVEROOTC_STORAGE_TO_LITTER_FIRE live root C storage fire mortality to litter gC/m^2/s F
- 694 M_LIVEROOTC_TO_DEADROOTC_FIRE live root C fire mortality to dead root C gC/m^2/s F
- 695 M_LIVEROOTC_TO_FIRE live root C fire loss gC/m^2/s F
- 696 M_LIVEROOTC_TO_LITTER_FIRE live root C fire mortality to litter gC/m^2/s F
- 697 M_LIVEROOTC_XFER_TO_FIRE live root C transfer fire loss gC/m^2/s F
- 698 M_LIVEROOTC_XFER_TO_LITTER_FIRE live root C transfer fire mortality to litter gC/m^2/s F
- 699 M_LIVESTEMC_STORAGE_TO_FIRE live stem C storage fire loss gC/m^2/s F
- 700 M_LIVESTEMC_STORAGE_TO_LITTER live stem C storage mortality gC/m^2/s F
- 701 M_LIVESTEMC_STORAGE_TO_LITTER_FIRE live stem C storage fire mortality to litter gC/m^2/s F
- 702 M_LIVESTEMC_TO_DEADSTEMC_FIRE live stem C fire mortality to dead stem C gC/m^2/s F
- 703 M_LIVESTEMC_TO_FIRE live stem C fire loss gC/m^2/s F
- 704 M_LIVESTEMC_TO_LITTER live stem C mortality gC/m^2/s F
- 705 M_LIVESTEMC_TO_LITTER_FIRE live stem C fire mortality to litter gC/m^2/s F
- 706 M_LIVESTEMC_XFER_TO_FIRE live stem C transfer fire loss gC/m^2/s F
- 707 M_LIVESTEMC_XFER_TO_LITTER live stem C transfer mortality gC/m^2/s F
- 708 M_LIVESTEMC_XFER_TO_LITTER_FIRE live stem C transfer fire mortality to litter gC/m^2/s F
- 709 M_LIVESTEMN_STORAGE_TO_FIRE live stem N storage fire loss gN/m^2/s F
- 710 M_LIVESTEMN_STORAGE_TO_LITTER live stem N storage mortality gN/m^2/s F
- 711 M_LIVESTEMN_TO_FIRE live stem N fire loss gN/m^2/s F
- 712 M_LIVESTEMN_TO_LITTER live stem N mortality gN/m^2/s F
- 713 M_LIVESTEMN_XFER_TO_FIRE live stem N transfer fire loss gN/m^2/s F
- 714 M_LIVESTEMN_XFER_TO_LITTER live stem N transfer mortality gN/m^2/s F
- 715 M_MET_LITC_TO_FIRE metabolic litter C fire loss gC/m^2/s F
- 716 M_MET_LITC_TO_FIRE_vr metabolic litter C fire loss gC/m^3/s F
- 717 M_MET_LITC_TO_LEACHING metabolic litter C leaching loss gC/m^2/s F
- 718 M_MET_LITN_TO_FIRE metabolic litter N fire loss gN/m^2 F
- 719 M_MET_LITN_TO_FIRE_vr metabolic litter N fire loss gN/m^3 F
- 720 M_MET_LITN_TO_LEACHING metabolic litter N leaching loss gN/m^2/s F
- 721 M_PAS_SOMC_TO_LEACHING passive soil organic C leaching loss gC/m^2/s F
- 722 M_PAS_SOMN_TO_LEACHING passive soil organic N leaching loss gN/m^2/s F
- 723 M_RETRANSN_TO_FIRE retranslocated N pool fire loss gN/m^2/s F
- 724 M_RETRANSN_TO_LITTER retranslocated N pool mortality gN/m^2/s F
- 725 M_SLO_SOMC_TO_LEACHING slow soil organic ma C leaching loss gC/m^2/s F
- 726 M_SLO_SOMN_TO_LEACHING slow soil organic ma N leaching loss gN/m^2/s F
- 727 NACTIVE Mycorrhizal N uptake flux gN/m^2/s T
- 728 NACTIVE_NH4 Mycorrhizal N uptake flux gN/m^2/s T
- 729 NACTIVE_NO3 Mycorrhizal N uptake flux gN/m^2/s T
- 730 NAM AM-associated N uptake flux gN/m^2/s T
- 731 NAM_NH4 AM-associated N uptake flux gN/m^2/s T
- 732 NAM_NO3 AM-associated N uptake flux gN/m^2/s T
- 733 NBP net biome production, includes fire, landuse, harvest and hrv_xsmrpool flux (latter smoothed o gC/m^2/s T
- 734 NDEPLOY total N deployed in new growth gN/m^2/s T
- 735 NDEP_PROF profile for atmospheric N deposition 1/m F
- 736 NDEP_TO_SMINN atmospheric N deposition to soil mineral N gN/m^2/s T
- 737 NECM ECM-associated N uptake flux gN/m^2/s T
- 738 NECM_NH4 ECM-associated N uptake flux gN/m^2/s T
- 739 NECM_NO3 ECM-associated N uptake flux gN/m^2/s T
- 740 NEE net ecosystem exchange of carbon, includes fire and hrv_xsmrpool (latter smoothed over the yea gC/m^2/s T
- 741 NEM Gridcell net adjustment to net carbon exchange passed to atm. for methane production gC/m2/s T
- 742 NEP net ecosystem production, excludes fire, landuse, and harvest flux, positive for sink gC/m^2/s T
- 743 NET_NMIN net rate of N mineralization gN/m^2/s T
- 744 NET_NMIN_vr net rate of N mineralization gN/m^3/s F
- 745 NFERTILIZATION fertilizer added gN/m^2/s T
- 746 NFIRE fire counts valid only in Reg.C counts/km2/sec T
- 747 NFIX Symbiotic BNF uptake flux gN/m^2/s T
- 748 NFIXATION_PROF profile for biological N fixation 1/m F
- 749 NFIX_TO_SMINN symbiotic/asymbiotic N fixation to soil mineral N gN/m^2/s F
- 750 NNONMYC Non-mycorrhizal N uptake flux gN/m^2/s T
- 751 NNONMYC_NH4 Non-mycorrhizal N uptake flux gN/m^2/s T
- 752 NNONMYC_NO3 Non-mycorrhizal N uptake flux gN/m^2/s T
- 753 NPASSIVE Passive N uptake flux gN/m^2/s T
- 754 NPOOL temporary plant N pool gN/m^2 T
- 755 NPOOL_TO_DEADCROOTN allocation to dead coarse root N gN/m^2/s F
- 756 NPOOL_TO_DEADCROOTN_STORAGE allocation to dead coarse root N storage gN/m^2/s F
- 757 NPOOL_TO_DEADSTEMN allocation to dead stem N gN/m^2/s F
- 758 NPOOL_TO_DEADSTEMN_STORAGE allocation to dead stem N storage gN/m^2/s F
- 759 NPOOL_TO_FROOTN allocation to fine root N gN/m^2/s F
- 760 NPOOL_TO_FROOTN_STORAGE allocation to fine root N storage gN/m^2/s F
- 761 NPOOL_TO_LEAFN allocation to leaf N gN/m^2/s F
- 762 NPOOL_TO_LEAFN_STORAGE allocation to leaf N storage gN/m^2/s F
- 763 NPOOL_TO_LIVECROOTN allocation to live coarse root N gN/m^2/s F
- 764 NPOOL_TO_LIVECROOTN_STORAGE allocation to live coarse root N storage gN/m^2/s F
- 765 NPOOL_TO_LIVESTEMN allocation to live stem N gN/m^2/s F
- 766 NPOOL_TO_LIVESTEMN_STORAGE allocation to live stem N storage gN/m^2/s F
- 767 NPP net primary production gC/m^2/s T
- 768 NPP_BURNEDOFF C that cannot be used for N uptake gC/m^2/s F
- 769 NPP_GROWTH Total C used for growth in FUN gC/m^2/s T
- 770 NPP_NACTIVE Mycorrhizal N uptake used C gC/m^2/s T
- 771 NPP_NACTIVE_NH4 Mycorrhizal N uptake use C gC/m^2/s T
- 772 NPP_NACTIVE_NO3 Mycorrhizal N uptake used C gC/m^2/s T
- 773 NPP_NAM AM-associated N uptake used C gC/m^2/s T
- 774 NPP_NAM_NH4 AM-associated N uptake use C gC/m^2/s T
- 775 NPP_NAM_NO3 AM-associated N uptake use C gC/m^2/s T
- 776 NPP_NECM ECM-associated N uptake used C gC/m^2/s T
- 777 NPP_NECM_NH4 ECM-associated N uptake use C gC/m^2/s T
- 778 NPP_NECM_NO3 ECM-associated N uptake used C gC/m^2/s T
- 779 NPP_NFIX Symbiotic BNF uptake used C gC/m^2/s T
- 780 NPP_NNONMYC Non-mycorrhizal N uptake used C gC/m^2/s T
- 781 NPP_NNONMYC_NH4 Non-mycorrhizal N uptake use C gC/m^2/s T
- 782 NPP_NNONMYC_NO3 Non-mycorrhizal N uptake use C gC/m^2/s T
- 783 NPP_NRETRANS Retranslocated N uptake flux gC/m^2/s T
- 784 NPP_NUPTAKE Total C used by N uptake in FUN gC/m^2/s T
- 785 NRETRANS Retranslocated N uptake flux gN/m^2/s T
- 786 NRETRANS_REG Retranslocated N uptake flux gN/m^2/s T
- 787 NRETRANS_SEASON Retranslocated N uptake flux gN/m^2/s T
- 788 NRETRANS_STRESS Retranslocated N uptake flux gN/m^2/s T
- 789 NSUBSTEPS number of adaptive timesteps in CLM timestep unitless F
- 790 NUPTAKE Total N uptake of FUN gN/m^2/s T
- 791 NUPTAKE_NPP_FRACTION frac of NPP used in N uptake - T
- 792 N_ALLOMETRY N allocation index none F
- 793 O2_DECOMP_DEPTH_UNSAT O2 consumption from HR and AR for non-inundated area mol/m3/s F
- 794 OBU Monin-Obukhov length m F
- 795 OCDEP total OC deposition (dry+wet) from atmosphere kg/m^2/s T
- 796 OFFSET_COUNTER offset days counter days F
- 797 OFFSET_FDD offset freezing degree days counter C degree-days F
- 798 OFFSET_FLAG offset flag none F
- 799 OFFSET_SWI offset soil water index none F
- 800 ONSET_COUNTER onset days counter days F
- 801 ONSET_FDD onset freezing degree days counter C degree-days F
- 802 ONSET_FLAG onset flag none F
- 803 ONSET_GDD onset growing degree days C degree-days F
- 804 ONSET_GDDFLAG onset flag for growing degree day sum none F
- 805 ONSET_SWI onset soil water index none F
- 806 O_SCALAR fraction by which decomposition is reduced due to anoxia unitless T
- 807 PAR240DZ 10-day running mean of daytime patch absorbed PAR for leaves for top canopy layer W/m^2 F
- 808 PAR240XZ 10-day running mean of maximum patch absorbed PAR for leaves for top canopy layer W/m^2 F
- 809 PAR240_shade shade PAR (240 hrs) umol/m2/s F
- 810 PAR240_sun sunlit PAR (240 hrs) umol/m2/s F
- 811 PAR24_shade shade PAR (24 hrs) umol/m2/s F
- 812 PAR24_sun sunlit PAR (24 hrs) umol/m2/s F
- 813 PARVEGLN absorbed par by vegetation at local noon W/m^2 T
- 814 PAR_shade shade PAR umol/m2/s F
- 815 PAR_sun sunlit PAR umol/m2/s F
- 816 PAS_SOMC PAS_SOM C gC/m^2 T
- 817 PAS_SOMC_1m PAS_SOM C to 1 meter gC/m^2 F
- 818 PAS_SOMC_TNDNCY_VERT_TRA passive soil organic C tendency due to vertical transport gC/m^3/s F
- 819 PAS_SOMC_TO_ACT_SOMC decomp. of passive soil organic C to active soil organic C gC/m^2/s F
- 820 PAS_SOMC_TO_ACT_SOMC_vr decomp. of passive soil organic C to active soil organic C gC/m^3/s F
- 821 PAS_SOMC_vr PAS_SOM C (vertically resolved) gC/m^3 T
- 822 PAS_SOMN PAS_SOM N gN/m^2 T
- 823 PAS_SOMN_1m PAS_SOM N to 1 meter gN/m^2 F
- 824 PAS_SOMN_TNDNCY_VERT_TRA passive soil organic N tendency due to vertical transport gN/m^3/s F
- 825 PAS_SOMN_TO_ACT_SOMN decomp. of passive soil organic N to active soil organic N gN/m^2 F
- 826 PAS_SOMN_TO_ACT_SOMN_vr decomp. of passive soil organic N to active soil organic N gN/m^3 F
- 827 PAS_SOMN_vr PAS_SOM N (vertically resolved) gN/m^3 T
- 828 PAS_SOM_HR Het. Resp. from passive soil organic gC/m^2/s F
- 829 PAS_SOM_HR_vr Het. Resp. from passive soil organic gC/m^3/s F
- 830 PBOT atmospheric pressure at surface (downscaled to columns in glacier regions) Pa T
- 831 PBOT_240 10 day running mean of air pressure Pa F
- 832 PCH4 atmospheric partial pressure of CH4 Pa T
- 833 PCO2 atmospheric partial pressure of CO2 Pa T
- 834 PCO2_240 10 day running mean of CO2 pressure Pa F
- 835 PFT_CTRUNC patch-level sink for C truncation gC/m^2 F
- 836 PFT_FIRE_CLOSS total patch-level fire C loss for non-peat fires outside land-type converted region gC/m^2/s T
- 837 PFT_FIRE_NLOSS total patch-level fire N loss gN/m^2/s T
- 838 PFT_NTRUNC patch-level sink for N truncation gN/m^2 F
- 839 PLANTCN Plant C:N used by FUN unitless F
- 840 PLANT_CALLOC total allocated C flux gC/m^2/s F
- 841 PLANT_NALLOC total allocated N flux gN/m^2/s F
- 842 PLANT_NDEMAND N flux required to support initial GPP gN/m^2/s T
- 843 PNLCZ Proportion of nitrogen allocated for light capture unitless F
- 844 PO2_240 10 day running mean of O2 pressure Pa F
- 845 POTENTIAL_IMMOB potential N immobilization gN/m^2/s T
- 846 POTENTIAL_IMMOB_vr potential N immobilization gN/m^3/s F
- 847 POT_F_DENIT potential denitrification flux gN/m^2/s T
- 848 POT_F_DENIT_vr potential denitrification flux gN/m^3/s F
- 849 POT_F_NIT potential nitrification flux gN/m^2/s T
- 850 POT_F_NIT_vr potential nitrification flux gN/m^3/s F
- 851 PREC10 10-day running mean of PREC MM H2O/S F
- 852 PREC60 60-day running mean of PREC MM H2O/S F
- 853 PREV_DAYL daylength from previous timestep s F
- 854 PREV_FROOTC_TO_LITTER previous timestep froot C litterfall flux gC/m^2/s F
- 855 PREV_LEAFC_TO_LITTER previous timestep leaf C litterfall flux gC/m^2/s F
- 856 PROD100C 100-yr wood product C gC/m^2 F
- 857 PROD100C_LOSS loss from 100-yr wood product pool gC/m^2/s F
- 858 PROD100N 100-yr wood product N gN/m^2 F
- 859 PROD100N_LOSS loss from 100-yr wood product pool gN/m^2/s F
- 860 PROD10C 10-yr wood product C gC/m^2 F
- 861 PROD10C_LOSS loss from 10-yr wood product pool gC/m^2/s F
- 862 PROD10N 10-yr wood product N gN/m^2 F
- 863 PROD10N_LOSS loss from 10-yr wood product pool gN/m^2/s F
- 864 PSNSHA shaded leaf photosynthesis umolCO2/m^2/s T
- 865 PSNSHADE_TO_CPOOL C fixation from shaded canopy gC/m^2/s T
- 866 PSNSUN sunlit leaf photosynthesis umolCO2/m^2/s T
- 867 PSNSUN_TO_CPOOL C fixation from sunlit canopy gC/m^2/s T
- 868 PSurf atmospheric pressure at surface (downscaled to columns in glacier regions) Pa F
- 869 Q2M 2m specific humidity kg/kg T
- 870 QAF canopy air humidity kg/kg F
- 871 QBOT atmospheric specific humidity (downscaled to columns in glacier regions) kg/kg T
- 872 QDIRECT_THROUGHFALL direct throughfall of liquid (rain + above-canopy irrigation) mm/s F
- 873 QDIRECT_THROUGHFALL_SNOW direct throughfall of snow mm/s F
- 874 QDRAI sub-surface drainage mm/s T
- 875 QDRAI_PERCH perched wt drainage mm/s T
- 876 QDRAI_XS saturation excess drainage mm/s T
- 877 QDRIP rate of excess canopy liquid falling off canopy mm/s F
- 878 QDRIP_SNOW rate of excess canopy snow falling off canopy mm/s F
- 879 QFLOOD runoff from river flooding mm/s T
- 880 QFLX_EVAP_TOT qflx_evap_soi + qflx_evap_can + qflx_tran_veg kg m-2 s-1 T
- 881 QFLX_EVAP_VEG vegetation evaporation mm H2O/s F
- 882 QFLX_ICE_DYNBAL ice dynamic land cover change conversion runoff flux mm/s T
- 883 QFLX_LIQDEW_TO_TOP_LAYER rate of liquid water deposited on top soil or snow layer (dew) mm H2O/s T
- 884 QFLX_LIQEVAP_FROM_TOP_LAYER rate of liquid water evaporated from top soil or snow layer mm H2O/s T
- 885 QFLX_LIQ_DYNBAL liq dynamic land cover change conversion runoff flux mm/s T
- 886 QFLX_LIQ_GRND liquid (rain+irrigation) on ground after interception mm H2O/s F
- 887 QFLX_SNOW_DRAIN drainage from snow pack mm/s T
- 888 QFLX_SNOW_DRAIN_ICE drainage from snow pack melt (ice landunits only) mm/s T
- 889 QFLX_SNOW_GRND snow on ground after interception mm H2O/s F
- 890 QFLX_SOLIDDEW_TO_TOP_LAYER rate of solid water deposited on top soil or snow layer (frost) mm H2O/s T
- 891 QFLX_SOLIDEVAP_FROM_TOP_LAYER rate of ice evaporated from top soil or snow layer (sublimation) (also includes bare ice subli mm H2O/s T
- 892 QFLX_SOLIDEVAP_FROM_TOP_LAYER_ICE rate of ice evaporated from top soil or snow layer (sublimation) (also includes bare ice subli mm H2O/s F
- 893 QH2OSFC surface water runoff mm/s T
- 894 QH2OSFC_TO_ICE surface water converted to ice mm/s F
- 895 QHR hydraulic redistribution mm/s T
- 896 QICE ice growth/melt mm/s T
- 897 QICE_FORC qice forcing sent to GLC mm/s F
- 898 QICE_FRZ ice growth mm/s T
- 899 QICE_MELT ice melt mm/s T
- 900 QINFL infiltration mm/s T
- 901 QINTR interception mm/s T
- 902 QIRRIG_DEMAND irrigation demand mm/s F
- 903 QIRRIG_DRIP water added via drip irrigation mm/s F
- 904 QIRRIG_FROM_GW_CONFINED water added through confined groundwater irrigation mm/s T
- 905 QIRRIG_FROM_GW_UNCONFINED water added through unconfined groundwater irrigation mm/s T
- 906 QIRRIG_FROM_SURFACE water added through surface water irrigation mm/s T
- 907 QIRRIG_SPRINKLER water added via sprinkler irrigation mm/s F
- 908 QOVER total surface runoff (includes QH2OSFC) mm/s T
- 909 QOVER_LAG time-lagged surface runoff for soil columns mm/s F
- 910 QPHSNEG net negative hydraulic redistribution flux mm/s F
- 911 QRGWL surface runoff at glaciers (liquid only), wetlands, lakes; also includes melted ice runoff fro mm/s T
- 912 QROOTSINK water flux from soil to root in each soil-layer mm/s F
- 913 QRUNOFF total liquid runoff not including correction for land use change mm/s T
- 914 QRUNOFF_ICE total liquid runoff not incl corret for LULCC (ice landunits only) mm/s T
- 915 QRUNOFF_ICE_TO_COUPLER total ice runoff sent to coupler (includes corrections for land use change) mm/s T
- 916 QRUNOFF_ICE_TO_LIQ liquid runoff from converted ice runoff mm/s F
- 917 QRUNOFF_R Rural total runoff mm/s F
- 918 QRUNOFF_TO_COUPLER total liquid runoff sent to coupler (includes corrections for land use change) mm/s T
- 919 QRUNOFF_U Urban total runoff mm/s F
- 920 QSNOCPLIQ excess liquid h2o due to snow capping not including correction for land use change mm H2O/s T
- 921 QSNOEVAP evaporation from snow (only when snl<0, otherwise it is equal to qflx_ev_soil) mm/s T
- 922 QSNOFRZ column-integrated snow freezing rate kg/m2/s T
- 923 QSNOFRZ_ICE column-integrated snow freezing rate (ice landunits only) mm/s T
- 924 QSNOMELT snow melt rate mm/s T
- 925 QSNOMELT_ICE snow melt (ice landunits only) mm/s T
- 926 QSNOUNLOAD canopy snow unloading mm/s T
- 927 QSNO_TEMPUNLOAD canopy snow temp unloading mm/s T
- 928 QSNO_WINDUNLOAD canopy snow wind unloading mm/s T
- 929 QSNWCPICE excess solid h2o due to snow capping not including correction for land use change mm H2O/s T
- 930 QSOIL Ground evaporation (soil/snow evaporation + soil/snow sublimation - dew) mm/s T
- 931 QSOIL_ICE Ground evaporation (ice landunits only) mm/s T
- 932 QTOPSOIL water input to surface mm/s F
- 933 QVEGE canopy evaporation mm/s T
- 934 QVEGT canopy transpiration mm/s T
- 935 Qair atmospheric specific humidity (downscaled to columns in glacier regions) kg/kg F
- 936 Qh sensible heat W/m^2 F
- 937 Qle total evaporation W/m^2 F
- 938 Qstor storage heat flux (includes snowmelt) W/m^2 F
- 939 Qtau momentum flux kg/m/s^2 F
- 940 RAH1 aerodynamical resistance s/m F
- 941 RAH2 aerodynamical resistance s/m F
- 942 RAIN atmospheric rain, after rain/snow repartitioning based on temperature mm/s T
- 943 RAIN_FROM_ATM atmospheric rain received from atmosphere (pre-repartitioning) mm/s T
- 944 RAIN_ICE atmospheric rain, after rain/snow repartitioning based on temperature (ice landunits only) mm/s F
- 945 RAM1 aerodynamical resistance s/m F
- 946 RAM_LAKE aerodynamic resistance for momentum (lakes only) s/m F
- 947 RAW1 aerodynamical resistance s/m F
- 948 RAW2 aerodynamical resistance s/m F
- 949 RB leaf boundary resistance s/m F
- 950 RB10 10 day running mean boundary layer resistance s/m F
- 951 RETRANSN plant pool of retranslocated N gN/m^2 T
- 952 RETRANSN_TO_NPOOL deployment of retranslocated N gN/m^2/s T
- 953 RH atmospheric relative humidity % F
- 954 RH2M 2m relative humidity % T
- 955 RH2M_R Rural 2m specific humidity % F
- 956 RH2M_U Urban 2m relative humidity % F
- 957 RH30 30-day running mean of relative humidity % F
- 958 RHAF fractional humidity of canopy air fraction F
- 959 RHAF10 10 day running mean of fractional humidity of canopy air fraction F
- 960 RH_LEAF fractional humidity at leaf surface fraction F
- 961 ROOTR effective fraction of roots in each soil layer (SMS method) proportion F
- 962 RR root respiration (fine root MR + total root GR) gC/m^2/s T
- 963 RRESIS root resistance in each soil layer proportion F
- 964 RSSHA shaded leaf stomatal resistance s/m T
- 965 RSSUN sunlit leaf stomatal resistance s/m T
- 966 Rainf atmospheric rain, after rain/snow repartitioning based on temperature mm/s F
- 967 Rnet net radiation W/m^2 F
- 968 SABG solar rad absorbed by ground W/m^2 T
- 969 SABG_PEN Rural solar rad penetrating top soil or snow layer watt/m^2 T
- 970 SABV solar rad absorbed by veg W/m^2 T
- 971 SDATES Crop sowing dates in each calendar year day of year (julian day) F
- 972 SDATES_PERHARV For each harvest in a calendar year, the Julian day the crop was sown day of year (julian day) F
- 973 SEEDC pool for seeding new PFTs via dynamic landcover gC/m^2 T
- 974 SEEDN pool for seeding new PFTs via dynamic landcover gN/m^2 T
- 975 SLASH_HARVESTC slash harvest carbon (to litter) gC/m^2/s T
- 976 SLO_SOMC SLO_SOM C gC/m^2 T
- 977 SLO_SOMC_1m SLO_SOM C to 1 meter gC/m^2 F
- 978 SLO_SOMC_TNDNCY_VERT_TRA slow soil organic ma C tendency due to vertical transport gC/m^3/s F
- 979 SLO_SOMC_TO_ACT_SOMC decomp. of slow soil organic ma C to active soil organic C gC/m^2/s F
- 980 SLO_SOMC_TO_ACT_SOMC_vr decomp. of slow soil organic ma C to active soil organic C gC/m^3/s F
- 981 SLO_SOMC_TO_PAS_SOMC decomp. of slow soil organic ma C to passive soil organic C gC/m^2/s F
- 982 SLO_SOMC_TO_PAS_SOMC_vr decomp. of slow soil organic ma C to passive soil organic C gC/m^3/s F
- 983 SLO_SOMC_vr SLO_SOM C (vertically resolved) gC/m^3 T
- 984 SLO_SOMN SLO_SOM N gN/m^2 T
- 985 SLO_SOMN_1m SLO_SOM N to 1 meter gN/m^2 F
- 986 SLO_SOMN_TNDNCY_VERT_TRA slow soil organic ma N tendency due to vertical transport gN/m^3/s F
- 987 SLO_SOMN_TO_ACT_SOMN decomp. of slow soil organic ma N to active soil organic N gN/m^2 F
- 988 SLO_SOMN_TO_ACT_SOMN_vr decomp. of slow soil organic ma N to active soil organic N gN/m^3 F
- 989 SLO_SOMN_TO_PAS_SOMN decomp. of slow soil organic ma N to passive soil organic N gN/m^2 F
- 990 SLO_SOMN_TO_PAS_SOMN_vr decomp. of slow soil organic ma N to passive soil organic N gN/m^3 F
- 991 SLO_SOMN_vr SLO_SOM N (vertically resolved) gN/m^3 T
- 992 SLO_SOM_HR_S1 Het. Resp. from slow soil organic ma gC/m^2/s F
- 993 SLO_SOM_HR_S1_vr Het. Resp. from slow soil organic ma gC/m^3/s F
- 994 SLO_SOM_HR_S3 Het. Resp. from slow soil organic ma gC/m^2/s F
- 995 SLO_SOM_HR_S3_vr Het. Resp. from slow soil organic ma gC/m^3/s F
- 996 SMINN soil mineral N gN/m^2 T
- 997 SMINN_TO_NPOOL deployment of soil mineral N uptake gN/m^2/s T
- 998 SMINN_TO_PLANT plant uptake of soil mineral N gN/m^2/s T
- 999 SMINN_TO_PLANT_FUN Total soil N uptake of FUN gN/m^2/s T
-1000 SMINN_TO_PLANT_vr plant uptake of soil mineral N gN/m^3/s F
-1001 SMINN_TO_S1N_L1 mineral N flux for decomp. of MET_LITto ACT_SOM gN/m^2 F
-1002 SMINN_TO_S1N_L1_vr mineral N flux for decomp. of MET_LITto ACT_SOM gN/m^3 F
-1003 SMINN_TO_S1N_L2 mineral N flux for decomp. of CEL_LITto ACT_SOM gN/m^2 F
-1004 SMINN_TO_S1N_L2_vr mineral N flux for decomp. of CEL_LITto ACT_SOM gN/m^3 F
-1005 SMINN_TO_S1N_S2 mineral N flux for decomp. of SLO_SOMto ACT_SOM gN/m^2 F
-1006 SMINN_TO_S1N_S2_vr mineral N flux for decomp. of SLO_SOMto ACT_SOM gN/m^3 F
-1007 SMINN_TO_S1N_S3 mineral N flux for decomp. of PAS_SOMto ACT_SOM gN/m^2 F
-1008 SMINN_TO_S1N_S3_vr mineral N flux for decomp. of PAS_SOMto ACT_SOM gN/m^3 F
-1009 SMINN_TO_S2N_L3 mineral N flux for decomp. of LIG_LITto SLO_SOM gN/m^2 F
-1010 SMINN_TO_S2N_L3_vr mineral N flux for decomp. of LIG_LITto SLO_SOM gN/m^3 F
-1011 SMINN_TO_S2N_S1 mineral N flux for decomp. of ACT_SOMto SLO_SOM gN/m^2 F
-1012 SMINN_TO_S2N_S1_vr mineral N flux for decomp. of ACT_SOMto SLO_SOM gN/m^3 F
-1013 SMINN_TO_S3N_S1 mineral N flux for decomp. of ACT_SOMto PAS_SOM gN/m^2 F
-1014 SMINN_TO_S3N_S1_vr mineral N flux for decomp. of ACT_SOMto PAS_SOM gN/m^3 F
-1015 SMINN_TO_S3N_S2 mineral N flux for decomp. of SLO_SOMto PAS_SOM gN/m^2 F
-1016 SMINN_TO_S3N_S2_vr mineral N flux for decomp. of SLO_SOMto PAS_SOM gN/m^3 F
-1017 SMINN_vr soil mineral N gN/m^3 T
-1018 SMIN_NH4 soil mineral NH4 gN/m^2 T
-1019 SMIN_NH4_TO_PLANT plant uptake of NH4 gN/m^3/s F
-1020 SMIN_NH4_vr soil mineral NH4 (vert. res.) gN/m^3 T
-1021 SMIN_NO3 soil mineral NO3 gN/m^2 T
-1022 SMIN_NO3_LEACHED soil NO3 pool loss to leaching gN/m^2/s T
-1023 SMIN_NO3_LEACHED_vr soil NO3 pool loss to leaching gN/m^3/s F
-1024 SMIN_NO3_MASSDENS SMIN_NO3_MASSDENS ugN/cm^3 soil F
-1025 SMIN_NO3_RUNOFF soil NO3 pool loss to runoff gN/m^2/s T
-1026 SMIN_NO3_RUNOFF_vr soil NO3 pool loss to runoff gN/m^3/s F
-1027 SMIN_NO3_TO_PLANT plant uptake of NO3 gN/m^3/s F
-1028 SMIN_NO3_vr soil mineral NO3 (vert. res.) gN/m^3 T
-1029 SMP soil matric potential (natural vegetated and crop landunits only) mm T
-1030 SNOBCMCL mass of BC in snow column kg/m2 T
-1031 SNOBCMSL mass of BC in top snow layer kg/m2 T
-1032 SNOCAN intercepted snow mm T
-1033 SNODSTMCL mass of dust in snow column kg/m2 T
-1034 SNODSTMSL mass of dust in top snow layer kg/m2 T
-1035 SNOFSDSND direct nir incident solar radiation on snow W/m^2 F
-1036 SNOFSDSNI diffuse nir incident solar radiation on snow W/m^2 F
-1037 SNOFSDSVD direct vis incident solar radiation on snow W/m^2 F
-1038 SNOFSDSVI diffuse vis incident solar radiation on snow W/m^2 F
-1039 SNOFSRND direct nir reflected solar radiation from snow W/m^2 T
-1040 SNOFSRNI diffuse nir reflected solar radiation from snow W/m^2 T
-1041 SNOFSRVD direct vis reflected solar radiation from snow W/m^2 T
-1042 SNOFSRVI diffuse vis reflected solar radiation from snow W/m^2 T
-1043 SNOINTABS Fraction of incoming solar absorbed by lower snow layers - T
-1044 SNOLIQFL top snow layer liquid water fraction (land) fraction F
-1045 SNOOCMCL mass of OC in snow column kg/m2 T
-1046 SNOOCMSL mass of OC in top snow layer kg/m2 T
-1047 SNORDSL top snow layer effective grain radius m^-6 F
-1048 SNOTTOPL snow temperature (top layer) K F
-1049 SNOTTOPL_ICE snow temperature (top layer, ice landunits only) K F
-1050 SNOTXMASS snow temperature times layer mass, layer sum; to get mass-weighted temperature, divide by (SNO K kg/m2 T
-1051 SNOTXMASS_ICE snow temperature times layer mass, layer sum (ice landunits only); to get mass-weighted temper K kg/m2 F
-1052 SNOW atmospheric snow, after rain/snow repartitioning based on temperature mm/s T
-1053 SNOWDP gridcell mean snow height m T
-1054 SNOWICE snow ice kg/m2 T
-1055 SNOWICE_ICE snow ice (ice landunits only) kg/m2 F
-1056 SNOWLIQ snow liquid water kg/m2 T
-1057 SNOWLIQ_ICE snow liquid water (ice landunits only) kg/m2 F
-1058 SNOW_5D 5day snow avg m F
-1059 SNOW_DEPTH snow height of snow covered area m T
-1060 SNOW_DEPTH_ICE snow height of snow covered area (ice landunits only) m F
-1061 SNOW_FROM_ATM atmospheric snow received from atmosphere (pre-repartitioning) mm/s T
-1062 SNOW_ICE atmospheric snow, after rain/snow repartitioning based on temperature (ice landunits only) mm/s F
-1063 SNOW_PERSISTENCE Length of time of continuous snow cover (nat. veg. landunits only) seconds T
-1064 SNOW_SINKS snow sinks (liquid water) mm/s T
-1065 SNOW_SOURCES snow sources (liquid water) mm/s T
-1066 SNO_ABS Absorbed solar radiation in each snow layer W/m^2 F
-1067 SNO_ABS_ICE Absorbed solar radiation in each snow layer (ice landunits only) W/m^2 F
-1068 SNO_BW Partial density of water in the snow pack (ice + liquid) kg/m3 F
-1069 SNO_BW_ICE Partial density of water in the snow pack (ice + liquid, ice landunits only) kg/m3 F
-1070 SNO_EXISTENCE Fraction of averaging period for which each snow layer existed unitless F
-1071 SNO_FRZ snow freezing rate in each snow layer kg/m2/s F
-1072 SNO_FRZ_ICE snow freezing rate in each snow layer (ice landunits only) mm/s F
-1073 SNO_GS Mean snow grain size Microns F
-1074 SNO_GS_ICE Mean snow grain size (ice landunits only) Microns F
-1075 SNO_ICE Snow ice content kg/m2 F
-1076 SNO_LIQH2O Snow liquid water content kg/m2 F
-1077 SNO_MELT snow melt rate in each snow layer mm/s F
-1078 SNO_MELT_ICE snow melt rate in each snow layer (ice landunits only) mm/s F
-1079 SNO_T Snow temperatures K F
-1080 SNO_TK Thermal conductivity W/m-K F
-1081 SNO_TK_ICE Thermal conductivity (ice landunits only) W/m-K F
-1082 SNO_T_ICE Snow temperatures (ice landunits only) K F
-1083 SNO_Z Snow layer thicknesses m F
-1084 SNO_Z_ICE Snow layer thicknesses (ice landunits only) m F
-1085 SNOdTdzL top snow layer temperature gradient (land) K/m F
-1086 SOIL10 10-day running mean of 12cm layer soil K F
-1087 SOILC_CHANGE C change in soil gC/m^2/s T
-1088 SOILC_HR soil C heterotrophic respiration gC/m^2/s T
-1089 SOILC_vr SOIL C (vertically resolved) gC/m^3 T
-1090 SOILICE soil ice (natural vegetated and crop landunits only) kg/m2 T
-1091 SOILLIQ soil liquid water (natural vegetated and crop landunits only) kg/m2 T
-1092 SOILN_vr SOIL N (vertically resolved) gN/m^3 T
-1093 SOILPSI soil water potential in each soil layer MPa F
-1094 SOILRESIS soil resistance to evaporation s/m T
-1095 SOILWATER_10CM soil liquid water + ice in top 10cm of soil (veg landunits only) kg/m2 T
-1096 SOMC_FIRE C loss due to peat burning gC/m^2/s T
-1097 SOMFIRE soil organic matter fire losses gC/m^2/s F
-1098 SOM_ADV_COEF advection term for vertical SOM translocation m/s F
-1099 SOM_C_LEACHED total flux of C from SOM pools due to leaching gC/m^2/s T
-1100 SOM_DIFFUS_COEF diffusion coefficient for vertical SOM translocation m^2/s F
-1101 SOM_N_LEACHED total flux of N from SOM pools due to leaching gN/m^2/s F
-1102 SOWING_REASON For each sowing in a calendar year, the reason the crop was sown categorical F
-1103 SOWING_REASON_PERHARV For each harvest in a calendar year, the reason the crop was sown categorical F
-1104 SR total soil respiration (HR + root resp) gC/m^2/s T
-1105 SSRE_FSR surface snow effect on reflected solar radiation W/m^2 T
-1106 SSRE_FSRND surface snow effect on direct nir reflected solar radiation W/m^2 T
-1107 SSRE_FSRNDLN surface snow effect on direct nir reflected solar radiation at local noon W/m^2 T
-1108 SSRE_FSRNI surface snow effect on diffuse nir reflected solar radiation W/m^2 T
-1109 SSRE_FSRVD surface snow radiatve effect on direct vis reflected solar radiation W/m^2 T
-1110 SSRE_FSRVDLN surface snow radiatve effect on direct vis reflected solar radiation at local noon W/m^2 T
-1111 SSRE_FSRVI surface snow radiatve effect on diffuse vis reflected solar radiation W/m^2 T
-1112 STEM_PROF profile for litter C and N inputs from stems 1/m F
-1113 STORAGE_CDEMAND C use from the C storage pool gC/m^2 F
-1114 STORAGE_GR growth resp for growth sent to storage for later display gC/m^2/s F
-1115 STORAGE_NDEMAND N demand during the offset period gN/m^2 F
-1116 STORVEGC stored vegetation carbon, excluding cpool gC/m^2 T
-1117 STORVEGN stored vegetation nitrogen gN/m^2 T
-1118 SUPPLEMENT_TO_SMINN supplemental N supply gN/m^2/s T
-1119 SUPPLEMENT_TO_SMINN_vr supplemental N supply gN/m^3/s F
-1120 SYEARS_PERHARV For each harvest in a calendar year, the year the crop was sown year F
-1121 SWBGT 2 m Simplified Wetbulb Globe Temp C T
-1122 SWBGT_R Rural 2 m Simplified Wetbulb Globe Temp C T
-1123 SWBGT_U Urban 2 m Simplified Wetbulb Globe Temp C T
-1124 SWMP65 2 m Swamp Cooler Temp 65% Eff C T
-1125 SWMP65_R Rural 2 m Swamp Cooler Temp 65% Eff C T
-1126 SWMP65_U Urban 2 m Swamp Cooler Temp 65% Eff C T
-1127 SWMP80 2 m Swamp Cooler Temp 80% Eff C T
-1128 SWMP80_R Rural 2 m Swamp Cooler Temp 80% Eff C T
-1129 SWMP80_U Urban 2 m Swamp Cooler Temp 80% Eff C T
-1130 SWdown atmospheric incident solar radiation W/m^2 F
-1131 SWup upwelling shortwave radiation W/m^2 F
-1132 SoilAlpha factor limiting ground evap unitless F
-1133 SoilAlpha_U urban factor limiting ground evap unitless F
-1134 T10 10-day running mean of 2-m temperature K F
-1135 TAF canopy air temperature K F
-1136 TAUX zonal surface stress kg/m/s^2 T
-1137 TAUY meridional surface stress kg/m/s^2 T
-1138 TBOT atmospheric air temperature (downscaled to columns in glacier regions) K T
-1139 TBUILD internal urban building air temperature K T
-1140 TBUILD_MAX prescribed maximum interior building temperature K F
-1141 TEMPAVG_T2M temporary average 2m air temperature K F
-1142 TEMPMAX_RETRANSN temporary annual max of retranslocated N pool gN/m^2 F
-1143 TEMPSUM_POTENTIAL_GPP temporary annual sum of potential GPP gC/m^2/yr F
-1144 TEQ 2 m Equiv Temp K T
-1145 TEQ_R Rural 2 m Equiv Temp K T
-1146 TEQ_U Urban 2 m Equiv Temp K T
-1147 TFLOOR floor temperature K F
-1148 TG ground temperature K T
-1149 TG_ICE ground temperature (ice landunits only) K F
-1150 TG_R Rural ground temperature K F
-1151 TG_U Urban ground temperature K F
-1152 TH2OSFC surface water temperature K T
-1153 THBOT atmospheric air potential temperature (downscaled to columns in glacier regions) K T
-1154 THIC 2 m Temp Hum Index Comfort C T
-1155 THIC_R Rural 2 m Temp Hum Index Comfort C T
-1156 THIC_U Urban 2 m Temp Hum Index Comfort C T
-1157 THIP 2 m Temp Hum Index Physiology C T
-1158 THIP_R Rural 2 m Temp Hum Index Physiology C T
-1159 THIP_U Urban 2 m Temp Hum Index Physiology C T
-1160 TKE1 top lake level eddy thermal conductivity W/(mK) T
-1161 TLAI total projected leaf area index m^2/m^2 T
-1162 TLAKE lake temperature K T
-1163 TOPO_COL column-level topographic height m F
-1164 TOPO_COL_ICE column-level topographic height (ice landunits only) m F
-1165 TOPO_FORC topograephic height sent to GLC m F
-1166 TOPT topt coefficient for VOC calc non F
-1167 TOTCOLC total column carbon, incl veg and cpool but excl product pools gC/m^2 T
-1168 TOTCOLCH4 total belowground CH4 (0 for non-lake special landunits in the absence of dynamic landunits) gC/m2 T
-1169 TOTCOLN total column-level N, excluding product pools gN/m^2 T
-1170 TOTECOSYSC total ecosystem carbon, incl veg but excl cpool and product pools gC/m^2 T
-1171 TOTECOSYSN total ecosystem N, excluding product pools gN/m^2 T
-1172 TOTFIRE total ecosystem fire losses gC/m^2/s F
-1173 TOTLITC total litter carbon gC/m^2 T
-1174 TOTLITC_1m total litter carbon to 1 meter depth gC/m^2 T
-1175 TOTLITN total litter N gN/m^2 T
-1176 TOTLITN_1m total litter N to 1 meter gN/m^2 T
-1177 TOTPFTC total patch-level carbon, including cpool gC/m^2 T
-1178 TOTPFTN total patch-level nitrogen gN/m^2 T
-1179 TOTSOILICE vertically summed soil cie (veg landunits only) kg/m2 T
-1180 TOTSOILLIQ vertically summed soil liquid water (veg landunits only) kg/m2 T
-1181 TOTSOMC total soil organic matter carbon gC/m^2 T
-1182 TOTSOMC_1m total soil organic matter carbon to 1 meter depth gC/m^2 T
-1183 TOTSOMN total soil organic matter N gN/m^2 T
-1184 TOTSOMN_1m total soil organic matter N to 1 meter gN/m^2 T
-1185 TOTVEGC total vegetation carbon, excluding cpool gC/m^2 T
-1186 TOTVEGN total vegetation nitrogen gN/m^2 T
-1187 TOT_WOODPRODC total wood product C gC/m^2 T
-1188 TOT_WOODPRODC_LOSS total loss from wood product pools gC/m^2/s T
-1189 TOT_WOODPRODN total wood product N gN/m^2 T
-1190 TOT_WOODPRODN_LOSS total loss from wood product pools gN/m^2/s T
-1191 TPU25T canopy profile of tpu umol/m2/s T
-1192 TRAFFICFLUX sensible heat flux from urban traffic W/m^2 F
-1193 TRANSFER_DEADCROOT_GR dead coarse root growth respiration from storage gC/m^2/s F
-1194 TRANSFER_DEADSTEM_GR dead stem growth respiration from storage gC/m^2/s F
-1195 TRANSFER_FROOT_GR fine root growth respiration from storage gC/m^2/s F
-1196 TRANSFER_GR growth resp for transfer growth displayed in this timestep gC/m^2/s F
-1197 TRANSFER_LEAF_GR leaf growth respiration from storage gC/m^2/s F
-1198 TRANSFER_LIVECROOT_GR live coarse root growth respiration from storage gC/m^2/s F
-1199 TRANSFER_LIVESTEM_GR live stem growth respiration from storage gC/m^2/s F
-1200 TREFMNAV daily minimum of average 2-m temperature K T
-1201 TREFMNAV_R Rural daily minimum of average 2-m temperature K F
-1202 TREFMNAV_U Urban daily minimum of average 2-m temperature K F
-1203 TREFMXAV daily maximum of average 2-m temperature K T
-1204 TREFMXAV_R Rural daily maximum of average 2-m temperature K F
-1205 TREFMXAV_U Urban daily maximum of average 2-m temperature K F
-1206 TROOF_INNER roof inside surface temperature K F
-1207 TSA 2m air temperature K T
-1208 TSAI total projected stem area index m^2/m^2 T
-1209 TSA_ICE 2m air temperature (ice landunits only) K F
-1210 TSA_R Rural 2m air temperature K F
-1211 TSA_U Urban 2m air temperature K F
-1212 TSHDW_INNER shadewall inside surface temperature K F
-1213 TSKIN skin temperature K T
-1214 TSL temperature of near-surface soil layer (natural vegetated and crop landunits only) K T
-1215 TSOI soil temperature (natural vegetated and crop landunits only) K T
-1216 TSOI_10CM soil temperature in top 10cm of soil K T
-1217 TSOI_ICE soil temperature (ice landunits only) K T
-1218 TSRF_FORC surface temperature sent to GLC K F
-1219 TSUNW_INNER sunwall inside surface temperature K F
-1220 TV vegetation temperature K T
-1221 TV24 vegetation temperature (last 24hrs) K F
-1222 TV240 vegetation temperature (last 240hrs) K F
-1223 TVEGD10 10 day running mean of patch daytime vegetation temperature Kelvin F
-1224 TVEGN10 10 day running mean of patch night-time vegetation temperature Kelvin F
-1225 TWS total water storage mm T
-1226 T_SCALAR temperature inhibition of decomposition unitless T
-1227 Tair atmospheric air temperature (downscaled to columns in glacier regions) K F
-1228 Tair_from_atm atmospheric air temperature received from atmosphere (pre-downscaling) K F
-1229 U10 10-m wind m/s T
-1230 U10_DUST 10-m wind for dust model m/s T
-1231 U10_ICE 10-m wind (ice landunits only) m/s F
-1232 UAF canopy air speed m/s F
-1233 ULRAD upward longwave radiation above the canopy W/m^2 F
-1234 UM wind speed plus stability effect m/s F
-1235 URBAN_AC urban air conditioning flux W/m^2 T
-1236 URBAN_HEAT urban heating flux W/m^2 T
-1237 USTAR aerodynamical resistance s/m F
-1238 UST_LAKE friction velocity (lakes only) m/s F
-1239 VA atmospheric wind speed plus convective velocity m/s F
-1240 VCMX25T canopy profile of vcmax25 umol/m2/s T
-1241 VEGWP vegetation water matric potential for sun/sha canopy,xyl,root segments mm T
-1242 VEGWPLN vegetation water matric potential for sun/sha canopy,xyl,root at local noon mm T
-1243 VEGWPPD predawn vegetation water matric potential for sun/sha canopy,xyl,root mm T
-1244 VOCFLXT total VOC flux into atmosphere moles/m2/sec F
-1245 VOLR river channel total water storage m3 T
-1246 VOLRMCH river channel main channel water storage m3 T
-1247 VPD vpd Pa F
-1248 VPD2M 2m vapor pressure deficit Pa T
-1249 VPD_CAN canopy vapor pressure deficit kPa T
-1250 Vcmx25Z canopy profile of vcmax25 predicted by LUNA model umol/m2/s T
-1251 WASTEHEAT sensible heat flux from heating/cooling sources of urban waste heat W/m^2 T
-1252 WBA 2 m Wet Bulb C T
-1253 WBA_R Rural 2 m Wet Bulb C T
-1254 WBA_U Urban 2 m Wet Bulb C T
-1255 WBT 2 m Stull Wet Bulb C T
-1256 WBT_R Rural 2 m Stull Wet Bulb C T
-1257 WBT_U Urban 2 m Stull Wet Bulb C T
-1258 WF soil water as frac. of whc for top 0.05 m proportion F
-1259 WFPS WFPS percent F
-1260 WIND atmospheric wind velocity magnitude m/s T
-1261 WOODC wood C gC/m^2 T
-1262 WOODC_ALLOC wood C eallocation gC/m^2/s T
-1263 WOODC_LOSS wood C loss gC/m^2/s T
-1264 WOOD_HARVESTC wood harvest carbon (to product pools) gC/m^2/s T
-1265 WOOD_HARVESTN wood harvest N (to product pools) gN/m^2/s T
-1266 WTGQ surface tracer conductance m/s T
-1267 W_SCALAR Moisture (dryness) inhibition of decomposition unitless T
-1268 Wind atmospheric wind velocity magnitude m/s F
-1269 XSMRPOOL temporary photosynthate C pool gC/m^2 T
-1270 XSMRPOOL_LOSS temporary photosynthate C pool loss gC/m^2 F
-1271 XSMRPOOL_RECOVER C flux assigned to recovery of negative xsmrpool gC/m^2/s T
-1272 Z0HG roughness length over ground, sensible heat m F
-1273 Z0HV roughness length over vegetation, sensible heat m F
-1274 Z0M momentum roughness length m F
-1275 Z0MG roughness length over ground, momentum m F
-1276 Z0MV roughness length over vegetation, momentum m F
-1277 Z0M_TO_COUPLER roughness length, momentum: gridcell average sent to coupler m F
-1278 Z0QG roughness length over ground, latent heat m F
-1279 Z0QV roughness length over vegetation, latent heat m F
-1280 ZBOT atmospheric reference height m T
-1281 ZETA dimensionless stability parameter unitless F
-1282 ZII convective boundary height m F
-1283 ZWT water table depth (natural vegetated and crop landunits only) m T
-1284 ZWT_CH4_UNSAT depth of water table for methane production used in non-inundated area m T
-1285 ZWT_PERCH perched water table depth (natural vegetated and crop landunits only) m T
-1286 anaerobic_frac anaerobic_frac m3/m3 F
-1287 bsw clap and hornberger B unitless F
-1288 currentPatch currentPatch coefficient for VOC calc non F
-1289 diffus diffusivity m^2/s F
-1290 fr_WFPS fr_WFPS fraction F
-1291 n2_n2o_ratio_denit n2_n2o_ratio_denit gN/gN F
-1292 num_iter number of iterations unitless F
-1293 r_psi r_psi m F
-1294 ratio_k1 ratio_k1 none F
-1295 ratio_no3_co2 ratio_no3_co2 ratio F
-1296 soil_bulkdensity soil_bulkdensity kg/m3 F
-1297 soil_co2_prod soil_co2_prod ug C / g soil / day F
-1298 watfc water field capacity m^3/m^3 F
-1299 watsat water saturated m^3/m^3 F
-==== =================================== ============================================================================================== ================================================================= =======
diff --git a/python/ctsm/crop_calendars/cropcal_module.py b/python/ctsm/crop_calendars/cropcal_module.py
index 73176431ba..76c295974d 100644
--- a/python/ctsm/crop_calendars/cropcal_module.py
+++ b/python/ctsm/crop_calendars/cropcal_module.py
@@ -1,6 +1,3 @@
-# Import the CTSM Python utilities
-import cropcal_utils as utils
-
import numpy as np
import xarray as xr
import warnings
@@ -8,6 +5,14 @@
import os
import glob
+# Import the CTSM Python utilities.
+# sys.path.insert() is necessary for RXCROPMATURITY to work. The fact that it's calling this script in the RUN phase seems to require the python/ directory to be manually added to path.
+_CTSM_PYTHON = os.path.join(
+ os.path.dirname(os.path.realpath(__file__)), os.pardir, os.pardir, os.pardir, "python"
+)
+sys.path.insert(1, _CTSM_PYTHON)
+import ctsm.crop_calendars.cropcal_utils as utils
+
try:
import pandas as pd
except:
diff --git a/python/ctsm/crop_calendars/generate_gdds.py b/python/ctsm/crop_calendars/generate_gdds.py
index 6000c12e41..b54e7df40f 100644
--- a/python/ctsm/crop_calendars/generate_gdds.py
+++ b/python/ctsm/crop_calendars/generate_gdds.py
@@ -1,6 +1,3 @@
-# Import supporting functions
-import generate_gdds_functions as gddfn
-
paramfile_dir = "/glade/p/cesmdata/cseg/inputdata/lnd/clm2/paramdata"
# Import other shared functions
@@ -8,10 +5,14 @@
import inspect
import sys
-currentdir = os.path.dirname(os.path.abspath(inspect.getfile(inspect.currentframe())))
-parentdir = os.path.dirname(currentdir)
-sys.path.insert(0, parentdir)
-import cropcal_module as cc
+# Import the CTSM Python utilities.
+# sys.path.insert() is necessary for RXCROPMATURITY to work. The fact that it's calling this script in the RUN phase seems to require the python/ directory to be manually added to path.
+_CTSM_PYTHON = os.path.join(
+ os.path.dirname(os.path.realpath(__file__)), os.pardir, os.pardir, os.pardir, "python"
+)
+sys.path.insert(1, _CTSM_PYTHON)
+import ctsm.crop_calendars.cropcal_module as cc
+import ctsm.crop_calendars.generate_gdds_functions as gddfn
# Import everything else
import os
diff --git a/python/ctsm/crop_calendars/generate_gdds_functions.py b/python/ctsm/crop_calendars/generate_gdds_functions.py
index d050a46bd8..cb05f1920d 100644
--- a/python/ctsm/crop_calendars/generate_gdds_functions.py
+++ b/python/ctsm/crop_calendars/generate_gdds_functions.py
@@ -1,6 +1,3 @@
-# Import the CTSM Python utilities
-import cropcal_utils as utils
-
import numpy as np
import xarray as xr
import warnings
@@ -9,11 +6,20 @@
import datetime as dt
from importlib import util as importlib_util
-import cropcal_module as cc
+# Import the CTSM Python utilities.
+# sys.path.insert() is necessary for RXCROPMATURITY to work. The fact that it's calling this script in the RUN phase seems to require the python/ directory to be manually added to path.
+_CTSM_PYTHON = os.path.join(
+ os.path.dirname(os.path.realpath(__file__)), os.pardir, os.pardir, os.pardir, "python"
+)
+import sys
+
+sys.path.insert(1, _CTSM_PYTHON)
+import ctsm.crop_calendars.cropcal_utils as utils
+import ctsm.crop_calendars.cropcal_module as cc
can_plot = True
try:
- from cropcal_figs_module import *
+ from ctsm.crop_calendars.cropcal_figs_module import *
from matplotlib.transforms import Bbox
warnings.filterwarnings(
@@ -25,10 +31,10 @@
message="Iteration over multi-part geometries is deprecated and will be removed in Shapely 2.0. Use the `geoms` property to access the constituent parts of a multi-part geometry.",
)
- print("Will (attempt to) produce harvest requirement maps.")
+ print("Will (attempt to) produce harvest requirement map figure files.")
except:
- print("Will NOT produce harvest requirement maps.")
+ print("Will NOT produce harvest requirement map figure files.")
can_plot = False
diff --git a/python/ctsm/crop_calendars/make_fsurdat_all_crops_everywhere.py b/python/ctsm/crop_calendars/make_fsurdat_all_crops_everywhere.py
deleted file mode 100755
index f8c5e8b316..0000000000
--- a/python/ctsm/crop_calendars/make_fsurdat_all_crops_everywhere.py
+++ /dev/null
@@ -1,55 +0,0 @@
-import numpy as np
-import xarray as xr
-import sys
-import argparse
-
-
-def main(file_in, file_out):
- # Import
-
- in_ds = xr.open_dataset(file_in)
-
- out_ds = in_ds.copy()
- in_ds.close()
-
- # Move all natural land into crop
- out_ds["PCT_CROP"] += in_ds["PCT_NATVEG"]
- out_ds["PCT_NATVEG"] -= in_ds["PCT_NATVEG"]
-
- # Put some of every crop in every gridcell
- pct_cft = np.full_like(in_ds["PCT_CFT"].values, 100 / in_ds.dims["cft"])
- out_ds["PCT_CFT"] = xr.DataArray(
- data=pct_cft, attrs=in_ds["PCT_CFT"].attrs, dims=in_ds["PCT_CFT"].dims
- )
-
- # Save
- out_ds.to_netcdf(file_out, format="NETCDF3_64BIT")
-
-
-if __name__ == "__main__":
- ###############################
- ### Process input arguments ###
- ###############################
- parser = argparse.ArgumentParser(
- description="Creates a surface dataset with all natural land moved into crops, and with every crop present in every gridcell."
- )
-
- # Required
- parser.add_argument(
- "-i",
- "--input-file",
- help="Surface dataset (fsurdat) file to process",
- required=True,
- )
- parser.add_argument(
- "-o",
- "--output-file",
- help="Where to save the new surface dataset file",
- required=True,
- )
-
- # Get arguments
- args = parser.parse_args(sys.argv[1:])
-
- # Process
- main(args.input_file, args.output_file)
diff --git a/python/ctsm/modify_input_files/fsurdat_modifier.py b/python/ctsm/modify_input_files/fsurdat_modifier.py
index 492fa74230..6d350171cc 100644
--- a/python/ctsm/modify_input_files/fsurdat_modifier.py
+++ b/python/ctsm/modify_input_files/fsurdat_modifier.py
@@ -237,6 +237,7 @@ def modify_optional(
std_elev,
soil_color,
dom_pft,
+ evenly_split_cropland,
lai,
sai,
hgt_top,
@@ -281,6 +282,10 @@ def modify_optional(
)
logger.info("dom_pft complete")
+ if evenly_split_cropland:
+ modify_fsurdat.evenly_split_cropland()
+ logger.info("evenly_split_cropland complete")
+
def read_cfg_optional_basic_opts(modify_fsurdat, config, cfg_path, section):
"""Read the optional parts of the main section of the config file.
@@ -429,10 +434,30 @@ def read_cfg_option_control(
logger.info("dom_pft option is on and = %s", str(dom_pft))
else:
logger.info("dom_pft option is off")
+ evenly_split_cropland = get_config_value(
+ config=config,
+ section=section,
+ item="evenly_split_cropland",
+ file_path=cfg_path,
+ convert_to_type=bool,
+ )
+ if (
+ evenly_split_cropland
+ and dom_pft is not None
+ and dom_pft > int(max(modify_fsurdat.file.natpft.values))
+ ):
+ abort("dom_pft must not be set to a crop PFT when evenly_split_cropland is True")
if process_subgrid and idealized:
abort("idealized AND process_subgrid_section can NOT both be on, pick one or the other")
- return (idealized, process_subgrid, process_var_list, include_nonveg, dom_pft)
+ return (
+ idealized,
+ process_subgrid,
+ process_var_list,
+ include_nonveg,
+ dom_pft,
+ evenly_split_cropland,
+ )
def read_cfg_required_basic_opts(config, section, cfg_path):
@@ -555,6 +580,7 @@ def fsurdat_modifier(parser):
process_var_list,
include_nonveg,
dom_pft,
+ evenly_split_cropland,
) = read_cfg_option_control(
modify_fsurdat,
config,
@@ -584,6 +610,7 @@ def fsurdat_modifier(parser):
std_elev,
soil_color,
dom_pft,
+ evenly_split_cropland,
lai,
sai,
hgt_top,
diff --git a/python/ctsm/modify_input_files/modify_fsurdat.py b/python/ctsm/modify_input_files/modify_fsurdat.py
index 9b3760e303..53f06d7dc8 100644
--- a/python/ctsm/modify_input_files/modify_fsurdat.py
+++ b/python/ctsm/modify_input_files/modify_fsurdat.py
@@ -165,6 +165,18 @@ def write_output(self, fsurdat_in, fsurdat_out):
logger.info("Successfully created fsurdat_out: %s", fsurdat_out)
self.file.close()
+ def evenly_split_cropland(self):
+ """
+ Description
+ -----------
+ In rectangle selected by user (or default -90 to 90 and 0 to 360),
+ replace fsurdat file's PCT_CFT with equal values for all crop types.
+ """
+ pct_cft = np.full_like(self.file["PCT_CFT"].values, 100 / self.file.dims["cft"])
+ self.file["PCT_CFT"] = xr.DataArray(
+ data=pct_cft, attrs=self.file["PCT_CFT"].attrs, dims=self.file["PCT_CFT"].dims
+ )
+
def set_dom_pft(self, dom_pft, lai, sai, hgt_top, hgt_bot):
"""
Description
diff --git a/python/ctsm/run_sys_tests.py b/python/ctsm/run_sys_tests.py
index 992f2b544a..e4a0bcf009 100644
--- a/python/ctsm/run_sys_tests.py
+++ b/python/ctsm/run_sys_tests.py
@@ -213,6 +213,13 @@ def run_sys_tests(
rerun_existing_failures=rerun_existing_failures,
extra_create_test_args=extra_create_test_args,
)
+
+ running_ctsm_py_tests = (
+ testfile == "/path/to/testfile"
+ or testlist in [["test1", "test2"], ["foo"]]
+ or suite_name == "my_suite"
+ )
+
if suite_name:
if not dry_run:
_make_cs_status_for_suite(testroot, testid_base)
@@ -225,16 +232,24 @@ def run_sys_tests(
testroot=testroot,
create_test_args=create_test_args,
dry_run=dry_run,
+ running_ctsm_py_tests=running_ctsm_py_tests,
)
else:
if not dry_run:
_make_cs_status_non_suite(testroot, testid_base)
+ running_ctsm_py_tests = testfile == "/path/to/testfile"
if testfile:
test_args = ["--testfile", os.path.abspath(testfile)]
+ if not running_ctsm_py_tests:
+ with open(test_args[1], "r") as testfile_abspath:
+ testname_list = testfile_abspath.readlines()
elif testlist:
test_args = testlist
+ testname_list = testlist
else:
raise RuntimeError("None of suite_name, testfile or testlist were provided")
+ if not running_ctsm_py_tests:
+ _try_systemtests(testname_list)
_run_create_test(
cime_path=cime_path,
test_args=test_args,
@@ -668,9 +683,10 @@ def _run_test_suite(
testroot,
create_test_args,
dry_run,
+ running_ctsm_py_tests,
):
if not suite_compilers:
- suite_compilers = _get_compilers_for_suite(suite_name, machine.name)
+ suite_compilers = _get_compilers_for_suite(suite_name, machine.name, running_ctsm_py_tests)
for compiler in suite_compilers:
test_args = [
"--xml-category",
@@ -692,12 +708,29 @@ def _run_test_suite(
)
-def _get_compilers_for_suite(suite_name, machine_name):
+def _try_systemtests(testname_list):
+ err_msg = " can't be loaded. Do you need to activate the ctsm_pylib conda environment?"
+ # Suppress pylint import-outside-toplevel warning because (a) we only want to import
+ # this when certain tests are requested, and (b) the import needs to be in a try-except
+ # block to produce a nice error message.
+ # pylint: disable=import-outside-toplevel disable
+ # Suppress pylint unused-import warning because the import itself IS the use.
+ # pylint: disable=unused-import disable
+ if any("FSURDATMODIFYCTSM" in t for t in testname_list):
+ try:
+ import ctsm.modify_input_files.modify_fsurdat
+ except ModuleNotFoundError as err:
+ raise ModuleNotFoundError("modify_fsurdat" + err_msg) from err
+
+
+def _get_compilers_for_suite(suite_name, machine_name, running_ctsm_py_tests):
test_data = get_tests_from_xml(xml_machine=machine_name, xml_category=suite_name)
if not test_data:
raise RuntimeError(
"No tests found for suite {} on machine {}".format(suite_name, machine_name)
)
+ if not running_ctsm_py_tests:
+ _try_systemtests([t["testname"] for t in test_data])
compilers = sorted({one_test["compiler"] for one_test in test_data})
logger.info("Running with compilers: %s", compilers)
return compilers
diff --git a/python/ctsm/site_and_regional/single_point_case.py b/python/ctsm/site_and_regional/single_point_case.py
index 96544ff9c1..456bebee91 100644
--- a/python/ctsm/site_and_regional/single_point_case.py
+++ b/python/ctsm/site_and_regional/single_point_case.py
@@ -52,6 +52,8 @@ class SinglePointCase(BaseCase):
flag for creating user mods directories and files
dom_pft : int
dominant pft type for this single point (None if not specified)
+ evenly_split_cropland : bool
+ flag for splitting cropland evenly among all crop types
pct_pft : list
weight or percentage of each pft.
num_pft : list
@@ -105,6 +107,7 @@ def __init__(
create_datm,
create_user_mods,
dom_pft,
+ evenly_split_cropland,
pct_pft,
num_pft,
include_nonveg,
@@ -125,6 +128,7 @@ def __init__(
self.plon = plon
self.site_name = site_name
self.dom_pft = dom_pft
+ self.evenly_split_cropland = evenly_split_cropland
self.pct_pft = pct_pft
self.num_pft = num_pft
self.include_nonveg = include_nonveg
@@ -437,6 +441,9 @@ def modify_surfdata_atpoint(self, f_orig):
f_mod["PCT_CROP"] = f_mod["PCT_CROP"] / tot_pct * 100
f_mod["PCT_NATVEG"] = f_mod["PCT_NATVEG"] / tot_pct * 100
+ if self.evenly_split_cropland:
+ f_mod["PCT_CFT"][:, :, :] = 100.0 / f_mod["PCT_CFT"].shape[2]
+
else:
logger.info(
"You chose --include-nonveg --> \
diff --git a/python/ctsm/subset_data.py b/python/ctsm/subset_data.py
index 4a3a5801f1..a99d42cc14 100644
--- a/python/ctsm/subset_data.py
+++ b/python/ctsm/subset_data.py
@@ -551,6 +551,7 @@ def subset_point(args, file_dict: dict):
create_datm=args.create_datm,
create_user_mods=args.create_user_mods,
dom_pft=args.dom_pft,
+ evenly_split_cropland=args.evenly_split_cropland,
pct_pft=args.pct_pft,
num_pft=num_pft,
include_nonveg=args.include_nonveg,
diff --git a/python/ctsm/test/test_sys_fsurdat_modifier.py b/python/ctsm/test/test_sys_fsurdat_modifier.py
index 72d38732cf..1a5045c14d 100755
--- a/python/ctsm/test/test_sys_fsurdat_modifier.py
+++ b/python/ctsm/test/test_sys_fsurdat_modifier.py
@@ -215,7 +215,6 @@ def test_opt_sections(self):
np.testing.assert_array_equal(fsurdat_out_data.PCT_CROP, zero0d)
np.testing.assert_array_equal(fsurdat_out_data.PCT_LAKE, zero0d)
np.testing.assert_array_equal(fsurdat_out_data.PCT_WETLAND, zero0d)
- np.testing.assert_array_equal(fsurdat_out_data.PCT_LAKE, zero0d)
np.testing.assert_array_equal(fsurdat_out_data.PCT_GLACIER, zero0d)
np.testing.assert_array_equal(fsurdat_out_data.PCT_URBAN, pct_urban)
np.testing.assert_array_equal(fsurdat_out_data.LAKEDEPTH, one0d * 200.0)
@@ -223,6 +222,30 @@ def test_opt_sections(self):
np.testing.assert_array_equal(fsurdat_out_data.ALB_ROOF_DIR, lev2_two)
np.testing.assert_array_equal(fsurdat_out_data.TK_ROOF, lev2_five)
+ def test_evenly_split_cropland(self):
+ """
+ Test that evenly splitting cropland works
+ """
+ self._create_config_file_evenlysplitcrop()
+ sys.argv = [
+ "fsurdat_modifier",
+ self._cfg_file_path,
+ ]
+ parser = fsurdat_modifier_arg_process()
+ fsurdat_modifier(parser)
+ # Read the resultant output file and make sure the fields are changed as expected
+ fsurdat_in_data = xr.open_dataset(self._fsurdat_in)
+ fsurdat_out_data = xr.open_dataset(self._fsurdat_out)
+ Ncrops = fsurdat_out_data.dims["cft"]
+ pct_cft = np.full_like(fsurdat_out_data.PCT_CFT, 100 / Ncrops)
+ np.testing.assert_array_equal(fsurdat_in_data.PCT_NATVEG, fsurdat_out_data.PCT_NATVEG)
+ np.testing.assert_array_equal(fsurdat_in_data.PCT_CROP, fsurdat_out_data.PCT_CROP)
+ np.testing.assert_array_equal(fsurdat_in_data.PCT_LAKE, fsurdat_out_data.PCT_LAKE)
+ np.testing.assert_array_equal(fsurdat_in_data.PCT_WETLAND, fsurdat_out_data.PCT_WETLAND)
+ np.testing.assert_array_equal(fsurdat_in_data.PCT_GLACIER, fsurdat_out_data.PCT_GLACIER)
+ np.testing.assert_array_equal(fsurdat_in_data.PCT_URBAN, fsurdat_out_data.PCT_URBAN)
+ np.testing.assert_array_equal(fsurdat_out_data.PCT_CFT, pct_cft)
+
def test_1x1_mexicocity(self):
"""
Test that the mexicocity file is handled correctly
@@ -407,6 +430,23 @@ def _create_config_file_minimal(self):
line = f"fsurdat_out = {self._fsurdat_out}"
cfg_out.write(line)
+ def _create_config_file_evenlysplitcrop(self):
+ """
+ Open the new and the template .cfg files
+ Loop line by line through the template .cfg file
+ When string matches, replace that line's content
+ """
+ with open(self._cfg_file_path, "w", encoding="utf-8") as cfg_out:
+ with open(self._cfg_template_path, "r", encoding="utf-8") as cfg_in:
+ for line in cfg_in:
+ if re.match(r" *evenly_split_cropland *=", line):
+ line = "evenly_split_cropland = True"
+ elif re.match(r" *fsurdat_in *=", line):
+ line = f"fsurdat_in = {self._fsurdat_in}"
+ elif re.match(r" *fsurdat_out *=", line):
+ line = f"fsurdat_out = {self._fsurdat_out}"
+ cfg_out.write(line)
+
def _create_config_file_crop(self):
"""
Open the new and the template .cfg files
@@ -430,6 +470,8 @@ def _create_config_file_crop(self):
line = "lnd_lon_2 = 300\n"
elif re.match(r" *dom_pft *=", line):
line = "dom_pft = 15"
+ elif re.match(r" *evenly_split_cropland *=", line):
+ line = "evenly_split_cropland = False"
elif re.match(r" *lai *=", line):
line = "lai = 0 1 2 3 4 5 5 4 3 2 1 0\n"
elif re.match(r" *sai *=", line):
@@ -465,6 +507,8 @@ def _create_config_file_complete(self):
line = "lnd_lon_2 = 300\n"
elif re.match(r" *dom_pft *=", line):
line = "dom_pft = 1"
+ elif re.match(r" *evenly_split_cropland *=", line):
+ line = "evenly_split_cropland = False"
elif re.match(r" *lai *=", line):
line = "lai = 0 1 2 3 4 5 5 4 3 2 1 0\n"
elif re.match(r" *sai *=", line):
diff --git a/python/ctsm/test/test_unit_fsurdat_modifier.py b/python/ctsm/test/test_unit_fsurdat_modifier.py
index 0ea862a8e4..166924903b 100755
--- a/python/ctsm/test/test_unit_fsurdat_modifier.py
+++ b/python/ctsm/test/test_unit_fsurdat_modifier.py
@@ -95,6 +95,18 @@ def test_subgrid_and_idealized_fails(self):
):
read_cfg_option_control(self.modify_fsurdat, self.config, section, self.cfg_path)
+ def test_dompft_and_splitcropland_fails(self):
+ """test that setting dompft crop with evenly_split_cropland True fails gracefully"""
+ section = "modify_fsurdat_basic_options"
+ crop_pft = max(self.modify_fsurdat.file.natpft.values) + 1
+ self.config.set(section, "dom_pft", str(crop_pft))
+ self.config.set(section, "evenly_split_cropland", "True")
+ with self.assertRaisesRegex(
+ SystemExit,
+ "dom_pft must not be set to a crop PFT when evenly_split_cropland is True",
+ ):
+ read_cfg_option_control(self.modify_fsurdat, self.config, section, self.cfg_path)
+
def test_optional_only_true_and_false(self):
"""test that optional settings can only be true or false"""
section = "modify_fsurdat_basic_options"
@@ -114,12 +126,18 @@ def test_optional_only_true_and_false(self):
read_cfg_option_control(self.modify_fsurdat, self.config, section, self.cfg_path)
self.config.set(section, "dom_pft", "UNSET")
read_cfg_option_control(self.modify_fsurdat, self.config, section, self.cfg_path)
- var = "idealized"
- self.config.set(section, var, "Thing")
- with self.assertRaisesRegex(
- SystemExit, "Non-boolean value found for .cfg file variable: " + var
- ):
- read_cfg_option_control(self.modify_fsurdat, self.config, section, self.cfg_path)
+ varlist = (
+ "idealized",
+ "evenly_split_cropland",
+ )
+ for var in varlist:
+ orig_value = self.config.get(section, var)
+ self.config.set(section, var, "Thing")
+ with self.assertRaisesRegex(
+ SystemExit, "Non-boolean value found for .cfg file variable: " + var
+ ):
+ read_cfg_option_control(self.modify_fsurdat, self.config, section, self.cfg_path)
+ self.config.set(section, var, orig_value)
def test_read_subgrid(self):
"""test a simple read of subgrid"""
@@ -164,6 +182,24 @@ def test_read_subgrid_allurban(self):
self.config.set(section, "pct_crop", "0.")
read_cfg_subgrid(self.config, self.cfg_path)
+ def test_read_subgrid_split_cropland(self):
+ """
+ test a read of subgrid that's 50/50 natural and
+ cropland, with cropland split evenly among
+ crop types
+ """
+ section = "modify_fsurdat_basic_options"
+ self.config.set(section, "idealized", "False")
+ self.config.set(section, "evenly_split_cropland", "True")
+ section = "modify_fsurdat_subgrid_fractions"
+ self.config.set(section, "pct_urban", "0.0 0.0 0.0")
+ self.config.set(section, "pct_lake", "0.")
+ self.config.set(section, "pct_wetland", "0.")
+ self.config.set(section, "pct_glacier", "0.")
+ self.config.set(section, "pct_natveg", "50.")
+ self.config.set(section, "pct_crop", "50.")
+ read_cfg_subgrid(self.config, self.cfg_path)
+
def test_read_var_list(self):
"""test a simple read of var_list"""
read_cfg_var_list(self.config, idealized=True)
diff --git a/python/ctsm/test/test_unit_singlept_data.py b/python/ctsm/test/test_unit_singlept_data.py
index 570207fa26..6fdc3109d9 100755
--- a/python/ctsm/test/test_unit_singlept_data.py
+++ b/python/ctsm/test/test_unit_singlept_data.py
@@ -36,6 +36,7 @@ class TestSinglePointCase(unittest.TestCase):
create_datm = True
create_user_mods = True
dom_pft = [8]
+ evenly_split_cropland = False
pct_pft = None
num_pft = 16
include_nonveg = False
@@ -58,6 +59,7 @@ def test_create_tag_noname(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -84,6 +86,7 @@ def test_create_tag_name(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -111,6 +114,7 @@ def test_check_dom_pft_too_big(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -138,6 +142,7 @@ def test_check_dom_pft_too_small(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -165,6 +170,7 @@ def test_check_dom_pft_numpft(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -193,6 +199,7 @@ def test_check_dom_pft_mixed_range(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -223,6 +230,7 @@ def test_check_nonveg_nodompft(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -254,6 +262,7 @@ def test_check_pct_pft_notsamenumbers(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -284,6 +293,7 @@ def test_check_pct_pft_sum_not1(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -314,6 +324,7 @@ def test_check_pct_pft_fraction_topct(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
diff --git a/python/ctsm/test/test_unit_singlept_data_surfdata.py b/python/ctsm/test/test_unit_singlept_data_surfdata.py
index 9623975452..0052e796d1 100755
--- a/python/ctsm/test/test_unit_singlept_data_surfdata.py
+++ b/python/ctsm/test/test_unit_singlept_data_surfdata.py
@@ -44,6 +44,7 @@ class TestSinglePointCaseSurfaceNoCrop(unittest.TestCase):
create_datm = True
create_user_mods = True
dom_pft = [8]
+ evenly_split_cropland = False
pct_pft = None
num_pft = 16
include_nonveg = False
@@ -155,6 +156,7 @@ def test_modify_surfdata_atpoint_nocrop_1pft_pctnatpft(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -187,6 +189,7 @@ def test_modify_surfdata_atpoint_nocrop_1pft_pctnatveg(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -215,6 +218,7 @@ def test_modify_surfdata_atpoint_nocrop_1pft_pctcrop(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -243,6 +247,7 @@ def test_modify_surfdata_atpoint_nocrop_1pft_glacier(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -272,6 +277,7 @@ def test_modify_surfdata_atpoint_nocrop_1pft_wetland(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -301,6 +307,7 @@ def test_modify_surfdata_atpoint_nocrop_1pft_lake(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -330,6 +337,7 @@ def test_modify_surfdata_atpoint_nocrop_1pft_unisnow(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -360,6 +368,7 @@ def test_modify_surfdata_atpoint_nocrop_1pft_capsat(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -390,6 +399,7 @@ def test_modify_surfdata_atpoint_nocrop_multipft(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -426,6 +436,7 @@ def test_modify_surfdata_atpoint_nocrop_urban_nononveg(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -460,6 +471,7 @@ def test_modify_surfdata_atpoint_nocrop_urban_include_nonveg(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -497,6 +509,7 @@ def test_modify_surfdata_atpoint_nocrop_wetland_include_nonveg(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -527,6 +540,7 @@ def test_modify_surfdata_atpoint_nocrop_nopft_zero_nonveg(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -560,6 +574,7 @@ def test_modify_surfdata_atpoint_nocrop_nopft_include_nonveg(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -594,6 +609,7 @@ class TestSinglePointCaseSurfaceCrop(unittest.TestCase):
create_datm = True
create_user_mods = True
dom_pft = [17]
+ evenly_split_cropland = False
pct_pft = None
num_pft = 78
include_nonveg = False
@@ -705,6 +721,7 @@ def test_modify_surfdata_atpoint_crop_1pft_pctnatpft(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -737,6 +754,7 @@ def test_modify_surfdata_atpoint_crop_1pft_pctnatveg(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -765,6 +783,7 @@ def test_modify_surfdata_atpoint_crop_1pft_pctcrop(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -793,6 +812,7 @@ def test_modify_surfdata_atpoint_crop_1pft_glacier(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -822,6 +842,7 @@ def test_modify_surfdata_atpoint_crop_1pft_wetland(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -851,6 +872,7 @@ def test_modify_surfdata_atpoint_crop_1pft_lake(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -880,6 +902,7 @@ def test_modify_surfdata_atpoint_crop_1pft_unisnow(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -909,6 +932,7 @@ def test_modify_surfdata_atpoint_crop_1pft_capsat(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -939,6 +963,7 @@ def test_modify_surfdata_atpoint_crop_multipft(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -973,6 +998,7 @@ def test_modify_surfdata_atpoint_crop_urban_nononveg(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -1007,6 +1033,7 @@ def test_modify_surfdata_atpoint_crop_urban_include_nonveg(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -1044,6 +1071,7 @@ def test_modify_surfdata_atpoint_crop_lake_include_nonveg(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -1074,6 +1102,7 @@ def test_modify_surfdata_atpoint_crop_nopft_zero_nonveg(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
@@ -1107,6 +1136,7 @@ def test_modify_surfdata_atpoint_crop_nopft_include_nonveg(self):
create_datm=self.create_datm,
create_user_mods=self.create_user_mods,
dom_pft=self.dom_pft,
+ evenly_split_cropland=self.evenly_split_cropland,
pct_pft=self.pct_pft,
num_pft=self.num_pft,
include_nonveg=self.include_nonveg,
diff --git a/python/ctsm/test/testinputs/modify_fsurdat_1x1mexicocity.cfg b/python/ctsm/test/testinputs/modify_fsurdat_1x1mexicocity.cfg
index a4118a3255..0d8a751f32 100644
--- a/python/ctsm/test/testinputs/modify_fsurdat_1x1mexicocity.cfg
+++ b/python/ctsm/test/testinputs/modify_fsurdat_1x1mexicocity.cfg
@@ -11,6 +11,7 @@ lat_dimname = lsmlat
lon_dimname = lsmlon
dom_pft = UNSET
+evenly_split_cropland = False
lai = UNSET
sai = UNSET
diff --git a/python/ctsm/test/testinputs/modify_fsurdat_opt_sections.cfg b/python/ctsm/test/testinputs/modify_fsurdat_opt_sections.cfg
index c068c5d851..b1fcf8a2e1 100644
--- a/python/ctsm/test/testinputs/modify_fsurdat_opt_sections.cfg
+++ b/python/ctsm/test/testinputs/modify_fsurdat_opt_sections.cfg
@@ -11,6 +11,7 @@ lat_dimname = lsmlat
lon_dimname = lsmlon
dom_pft = UNSET
+evenly_split_cropland = False
lai = UNSET
sai = UNSET
diff --git a/python/ctsm/test/testinputs/modify_fsurdat_short.cfg b/python/ctsm/test/testinputs/modify_fsurdat_short.cfg
index 74c6639899..38b88795e8 100644
--- a/python/ctsm/test/testinputs/modify_fsurdat_short.cfg
+++ b/python/ctsm/test/testinputs/modify_fsurdat_short.cfg
@@ -14,6 +14,7 @@ lat_dimname = lsmlat
lon_dimname = lsmlon
dom_pft = UNSET
+evenly_split_cropland = False
lai = UNSET
sai = UNSET
diff --git a/src/biogeochem/CNPhenologyMod.F90 b/src/biogeochem/CNPhenologyMod.F90
index 070dc0eb0f..7044cdc402 100644
--- a/src/biogeochem/CNPhenologyMod.F90
+++ b/src/biogeochem/CNPhenologyMod.F90
@@ -1726,6 +1726,7 @@ subroutine CropPhenology(num_pcropp, filter_pcropp , &
use clm_time_manager , only : get_prev_calday, get_curr_days_per_year, is_beg_curr_year
use clm_time_manager , only : get_average_days_per_year
use clm_time_manager , only : get_prev_date
+ use clm_time_manager , only : is_doy_in_interval
use pftconMod , only : ntmp_corn, nswheat, nwwheat, ntmp_soybean
use pftconMod , only : nirrig_tmp_corn, nirrig_swheat, nirrig_wwheat, nirrig_tmp_soybean
use pftconMod , only : ntrp_corn, nsugarcane, ntrp_soybean, ncotton, nrice
@@ -1930,7 +1931,7 @@ subroutine CropPhenology(num_pcropp, filter_pcropp , &
end if
! This is outside the croplive check so that the "harvest if planting conditions were met today" conditional works.
- is_in_sowing_window = jday >= minplantjday(ivt(p),h) .and. jday <= maxplantjday(ivt(p),h)
+ is_in_sowing_window = is_doy_in_interval(minplantjday(ivt(p),h), maxplantjday(ivt(p),h), jday)
is_end_sowing_window = jday == maxplantjday(ivt(p),h)
!
! Only allow sowing according to normal "window" rules if not using prescribed
diff --git a/src/main/clm_varctl.F90 b/src/main/clm_varctl.F90
index 7af8c56bff..7fe5d24bba 100644
--- a/src/main/clm_varctl.F90
+++ b/src/main/clm_varctl.F90
@@ -403,8 +403,8 @@ module clm_varctl
! namelist: write CH4 extra diagnostic output
logical, public :: hist_wrtch4diag = .false.
- ! namelist: write history master list to a file for use in documentation
- logical, public :: hist_master_list_file = .false.
+ ! namelist: write list of all history fields to a file for use in documentation
+ logical, public :: hist_fields_list_file = .false.
!----------------------------------------------------------
! FATES
diff --git a/src/main/controlMod.F90 b/src/main/controlMod.F90
index e55c57edb7..97d25075ad 100644
--- a/src/main/controlMod.F90
+++ b/src/main/controlMod.F90
@@ -162,7 +162,7 @@ subroutine control_init(dtime)
hist_fexcl4, hist_fexcl5, hist_fexcl6, &
hist_fexcl7, hist_fexcl8, &
hist_fexcl9, hist_fexcl10
- namelist /clm_inparm/ hist_wrtch4diag, hist_master_list_file
+ namelist /clm_inparm/ hist_wrtch4diag, hist_fields_list_file
! BGC info
@@ -857,7 +857,7 @@ subroutine control_spmd()
if (use_lch4) then
call mpi_bcast (hist_wrtch4diag, 1, MPI_LOGICAL, 0, mpicom, ier)
end if
- call mpi_bcast (hist_master_list_file, 1, MPI_LOGICAL, 0, mpicom, ier)
+ call mpi_bcast (hist_fields_list_file, 1, MPI_LOGICAL, 0, mpicom, ier)
call mpi_bcast (hist_fexcl1, max_namlen*size(hist_fexcl1), MPI_CHARACTER, 0, mpicom, ier)
call mpi_bcast (hist_fexcl2, max_namlen*size(hist_fexcl2), MPI_CHARACTER, 0, mpicom, ier)
call mpi_bcast (hist_fexcl3, max_namlen*size(hist_fexcl3), MPI_CHARACTER, 0, mpicom, ier)
diff --git a/src/main/histFileMod.F90 b/src/main/histFileMod.F90
index ffae35f487..c72117b090 100644
--- a/src/main/histFileMod.F90
+++ b/src/main/histFileMod.F90
@@ -141,13 +141,13 @@ module histFileMod
logical, private :: if_disphist(max_tapes) ! restart, true => save history file
!
! !PUBLIC MEMBER FUNCTIONS: (in rough call order)
- public :: hist_addfld1d ! Add a 1d single-level field to the master field list
- public :: hist_addfld2d ! Add a 2d multi-level field to the master field list
+ public :: hist_addfld1d ! Add a 1d single-level field to the list of all history fields
+ public :: hist_addfld2d ! Add a 2d multi-level field to the list of all history fields
public :: hist_addfld_decomp ! Add a 1d/2d field based on patch or column data
public :: hist_add_subscript ! Add a 2d subscript dimension
- public :: hist_printflds ! Print summary of master field list
- public :: htapes_fieldlist ! Finalize history file field lists, intersecting masterlist with
+ public :: hist_printflds ! Print summary of list of all history fields
+ public :: htapes_fieldlist ! Finalize history file field lists, intersecting allhistfldlist with
! namelist params.
public :: hist_htapes_build ! Initialize history file handler (for initial or continued run)
@@ -158,10 +158,10 @@ module histFileMod
!
! !PRIVATE MEMBER FUNCTIONS:
private :: is_mapping_upto_subgrid ! Is this field being mapped up to a higher subgrid level?
- private :: masterlist_make_active ! Declare a single field active for a single tape
- private :: masterlist_addfld ! Add a field to the master field list
- private :: masterlist_change_timeavg ! Override default history tape contents for specific tape
- private :: htape_addfld ! Transfer field metadata from masterlist to a history tape.
+ private :: allhistfldlist_make_active ! Declare a single field active for a single tape
+ private :: allhistfldlist_addfld ! Add a field to the list of all history fields
+ private :: allhistfldlist_change_timeavg ! Override default history tape contents for specific tape
+ private :: htape_addfld ! Transfer field metadata from allhistfldlist to a history tape.
private :: htape_create ! Define netcdf metadata of history file t
private :: htape_add_ltype_metadata ! Add global metadata defining landunit types
private :: htape_add_ctype_metadata ! Add global metadata defining column types
@@ -255,14 +255,14 @@ end subroutine copy_entry_interface
! Additional per-field metadata. See also history_entry.
! These values are specified in hist_addfld* calls but then can be
! overridden by namelist params like hist_fincl1.
- type, extends(entry_base) :: master_entry
+ type, extends(entry_base) :: allhistfldlist_entry
logical :: actflag(max_tapes) ! which history tapes to write to.
character(len=avgflag_strlen) :: avgflag(max_tapes) ! type of time averaging
contains
- procedure :: copy => copy_master_entry
- end type master_entry
+ procedure :: copy => copy_allhistfldlist_entry
+ end type allhistfldlist_entry
- ! Actual per-field history data, accumulated from clmptr_r* vars. See also master_entry.
+ ! Actual per-field history data, accumulated from clmptr_r* vars. See also allhistfldlist_entry.
type, extends(entry_base) :: history_entry
character(len=avgflag_strlen) :: avgflag ! time averaging flag ("X","A","M","I","SUM")
real(r8), pointer :: hbuf(:,:) ! history buffer (dimensions: dim1d x num2d)
@@ -275,7 +275,7 @@ end subroutine copy_entry_interface
! at a given time frequency and precision. The first ('primary') tape defaults to a non-empty set
! of active fields (see hist_addfld* methods), overridable by namelist flags, while the other
! tapes are entirely manually configured via namelist flags. The set of active fields across all
- ! tapes is assembled in the 'masterlist' variable. Note that the first history tape is index 1 in
+ ! tapes is assembled in the 'allhistfldlist' variable. Note that the first history tape is index 1 in
! the code but contains 'h0' in its output filenames (see set_hist_filename method).
type history_tape
integer :: nflds ! number of active fields on tape
@@ -287,7 +287,7 @@ end subroutine copy_entry_interface
logical :: is_endhist ! true => current time step is end of history interval
real(r8) :: begtime ! time at beginning of history averaging interval
type (history_entry) :: hlist(max_flds) ! array of active history tape entries.
- ! The ordering matches the masterlist's.
+ ! The ordering matches the allhistfldlist's.
end type history_tape
type clmpoint_rs ! Pointer to real scalar data (1D)
@@ -308,7 +308,7 @@ end subroutine copy_entry_interface
! hist_addfld* calls in the code.
! For the field data itself, see 'tape'.
!
- type (master_entry) :: masterlist(max_flds) ! master field list
+ type (allhistfldlist_entry) :: allhistfldlist(max_flds) ! list of all history fields
!
! Whether each history tape is in use in this run. If history_tape_in_use(i) is false,
! then data in tape(i) is undefined and should not be referenced.
@@ -316,7 +316,7 @@ end subroutine copy_entry_interface
logical :: history_tape_in_use(max_tapes) ! whether each history tape is in use in this run
!
! The actual (accumulated) history data for all active fields in each in-use tape. See
- ! 'history_tape_in_use' for in-use tapes, and 'masterlist' for active fields. See also
+ ! 'history_tape_in_use' for in-use tapes, and 'allhistfldlist' for active fields. See also
! clmptr_r* variables for raw history data.
!
type (history_tape) :: tape(max_tapes) ! array of history tapes
@@ -325,7 +325,7 @@ end subroutine copy_entry_interface
!
! Counters
!
- integer :: nfmaster = 0 ! number of fields in master field list
+ integer :: nallhistflds = 0 ! number of fields in list of all history fields
!
! Other variables
!
@@ -361,10 +361,10 @@ end subroutine copy_entry_interface
subroutine hist_printflds()
!
! !DESCRIPTION:
- ! Print summary of master field list.
+ ! Print summary of list of all history fields.
!
! !USES:
- use clm_varctl, only: hist_master_list_file
+ use clm_varctl, only: hist_fields_list_file
use fileutils, only: getavu, relavu
!
! !ARGUMENTS:
@@ -372,43 +372,43 @@ subroutine hist_printflds()
! !LOCAL VARIABLES:
integer, parameter :: ncol = 5 ! number of table columns
integer nf, i, j ! do-loop counters
- integer master_list_file ! file unit number
+ integer hist_fields_file ! file unit number
integer width_col(ncol) ! widths of table columns
integer width_col_sum ! widths of columns summed, including spaces
character(len=3) str_width_col(ncol) ! string version of width_col
character(len=3) str_w_col_sum ! string version of width_col_sum
character(len=7) file_identifier ! fates identifier used in file_name
- character(len=23) file_name ! master_list_file.rst with or without fates
+ character(len=26) file_name ! hist_fields_file.rst with or without fates
character(len=99) fmt_txt ! format statement
character(len=*),parameter :: subname = 'CLM_hist_printflds'
!-----------------------------------------------------------------------
if (masterproc) then
- write(iulog,*) trim(subname),' : number of master fields = ',nfmaster
- write(iulog,*)' ******* MASTER FIELD LIST *******'
- do nf = 1,nfmaster
- write(iulog,9000)nf, masterlist(nf)%field%name, masterlist(nf)%field%units
+ write(iulog,*) trim(subname),' : number of history fields = ',nallhistflds
+ write(iulog,*)' ******* LIST OF ALL HISTORY FIELDS *******'
+ do nf = 1,nallhistflds
+ write(iulog,9000)nf, allhistfldlist(nf)%field%name, allhistfldlist(nf)%field%units
9000 format (i5,1x,a32,1x,a16)
end do
call shr_sys_flush(iulog)
end if
- ! Print master field list in separate text file when namelist
+ ! Print list of all history fields in separate text file when namelist
! variable requests it. Text file is formatted in the .rst
! (reStructuredText) format for easy introduction of the file to
! the CTSM's web-based documentation.
! First sort the list to be in alphabetical order
- call sort_hist_list(1, nfmaster, masterlist)
+ call sort_hist_list(1, nallhistflds, allhistfldlist)
- if (masterproc .and. hist_master_list_file) then
+ if (masterproc .and. hist_fields_list_file) then
! Hardwired table column widths to fit the table on a computer
! screen. Some strings will be truncated as a result of the
- ! current choices (4, 35, 94, 65, 7). In sphinx (ie the web-based
+ ! current choices (35, 16, 94, 65, 7). In sphinx (ie the web-based
! documentation), text that has not been truncated will wrap
! around in the available space.
- width_col(1) = 4 ! column that shows the variable number, nf
- width_col(2) = 35 ! variable name column
+ width_col(1) = 35 ! variable name column
+ width_col(2) = hist_dim_name_length ! level dimension column
width_col(3) = 94 ! long description column
width_col(4) = 65 ! units column
width_col(5) = 7 ! active (T or F) column
@@ -421,97 +421,98 @@ subroutine hist_printflds()
end do
write(str_w_col_sum,'(i0)') width_col_sum
- ! Open master_list_file
- master_list_file = getavu() ! get next available file unit number
+ ! Open hist_fields_file
+ hist_fields_file = getavu() ! get next available file unit number
if (use_fates) then
file_identifier = 'fates'
else
file_identifier = 'nofates'
end if
- file_name = 'master_list_' // trim(file_identifier) // '.rst'
- open(unit = master_list_file, file = file_name, &
+ file_name = 'history_fields_' // trim(file_identifier) // '.rst'
+ open(unit = hist_fields_file, file = file_name, &
status = 'replace', action = 'write', form = 'formatted')
! File title
fmt_txt = '(a)'
- write(master_list_file,fmt_txt) '============================='
- write(master_list_file,fmt_txt) 'CTSM History Fields (' // trim(file_identifier) // ')'
- write(master_list_file,fmt_txt) '============================='
- write(master_list_file,*)
+ write(hist_fields_file,fmt_txt) '============================='
+ write(hist_fields_file,fmt_txt) 'CTSM History Fields (' // trim(file_identifier) // ')'
+ write(hist_fields_file,fmt_txt) '============================='
+ write(hist_fields_file,*)
! A warning message and flags from the current CTSM case
- write(master_list_file,fmt_txt) 'CAUTION: Not all variables are relevant / present for all CTSM cases.'
- write(master_list_file,fmt_txt) 'Key flags used in this CTSM case:'
+ write(hist_fields_file,fmt_txt) 'CAUTION: Not all variables are relevant / present for all CTSM cases.'
+ write(hist_fields_file,fmt_txt) 'Key flags used in this CTSM case:'
fmt_txt = '(a,l)'
- write(master_list_file,fmt_txt) 'use_cn = ', use_cn
- write(master_list_file,fmt_txt) 'use_crop = ', use_crop
- write(master_list_file,fmt_txt) 'use_fates = ', use_fates
- write(master_list_file,*)
+ write(hist_fields_file,fmt_txt) 'use_cn = ', use_cn
+ write(hist_fields_file,fmt_txt) 'use_crop = ', use_crop
+ write(hist_fields_file,fmt_txt) 'use_fates = ', use_fates
+ write(hist_fields_file,*)
! Table header
! Concatenate strings needed in format statement
do i = 1, ncol
fmt_txt = '('//str_width_col(i)//'a,x)'
- write(master_list_file,fmt_txt,advance='no') ('=', j=1,width_col(i))
+ write(hist_fields_file,fmt_txt,advance='no') ('=', j=1,width_col(i))
end do
- write(master_list_file,*) ! next write statement will now appear in new line
+ write(hist_fields_file,*) ! next write statement will now appear in new line
! Table title
fmt_txt = '(a)'
- write(master_list_file,fmt_txt) 'CTSM History Fields'
+ write(hist_fields_file,fmt_txt) 'CTSM History Fields'
! Sub-header
! Concatenate strings needed in format statement
fmt_txt = '('//str_w_col_sum//'a)'
- write(master_list_file,fmt_txt) ('-', i=1, width_col_sum)
+ write(hist_fields_file,fmt_txt) ('-', i=1, width_col_sum)
! Concatenate strings needed in format statement
fmt_txt = '(a'//str_width_col(1)//',x,a'//str_width_col(2)//',x,a'//str_width_col(3)//',x,a'//str_width_col(4)//',x,a'//str_width_col(5)//')'
- write(master_list_file,fmt_txt) '#', 'Variable Name', &
- 'Long Description', 'Units', 'Active?'
+ write(hist_fields_file,fmt_txt) 'Variable Name', &
+ 'Level Dim.', 'Long Description', 'Units', 'Active?'
! End header, same as header
! Concatenate strings needed in format statement
do i = 1, ncol
fmt_txt = '('//str_width_col(i)//'a,x)'
- write(master_list_file,fmt_txt,advance='no') ('=', j=1,width_col(i))
+ write(hist_fields_file,fmt_txt,advance='no') ('=', j=1,width_col(i))
end do
- write(master_list_file,*) ! next write statement will now appear in new line
+ write(hist_fields_file,*) ! next write statement will now appear in new line
! Main table
! Concatenate strings needed in format statement
- fmt_txt = '(i'//str_width_col(1)//',x,a'//str_width_col(2)//',x,a'//str_width_col(3)//',x,a'//str_width_col(4)//',l'//str_width_col(5)//')'
- do nf = 1,nfmaster
- write(master_list_file,fmt_txt) nf, &
- masterlist(nf)%field%name, &
- masterlist(nf)%field%long_name, &
- masterlist(nf)%field%units, &
- masterlist(nf)%actflag(1)
+ fmt_txt = '(a'//str_width_col(1)//',x,a'//str_width_col(2)//',x,a'//str_width_col(3)//',x,a'//str_width_col(4)//',l'//str_width_col(5)//')'
+ do nf = 1,nallhistflds
+ write(hist_fields_file,fmt_txt) &
+ allhistfldlist(nf)%field%name, &
+ allhistfldlist(nf)%field%type2d, &
+ allhistfldlist(nf)%field%long_name, &
+ allhistfldlist(nf)%field%units, &
+ allhistfldlist(nf)%actflag(1)
end do
! Table footer, same as header
! Concatenate strings needed in format statement
do i = 1, ncol
fmt_txt = '('//str_width_col(i)//'a,x)'
- write(master_list_file,fmt_txt,advance='no') ('=', j=1,width_col(i))
+ write(hist_fields_file,fmt_txt,advance='no') ('=', j=1,width_col(i))
end do
- call shr_sys_flush(master_list_file)
- close(unit = master_list_file)
- call relavu(master_list_file) ! close and release file unit number
+ call shr_sys_flush(hist_fields_file)
+ close(unit = hist_fields_file)
+ call relavu(hist_fields_file) ! close and release file unit number
end if
end subroutine hist_printflds
!-----------------------------------------------------------------------
- subroutine masterlist_addfld (fname, numdims, type1d, type1d_out, &
+ subroutine allhistfldlist_addfld (fname, numdims, type1d, type1d_out, &
type2d, num2d, units, avgflag, long_name, hpindex, &
p2c_scale_type, c2l_scale_type, l2g_scale_type, &
no_snow_behavior)
!
! !DESCRIPTION:
- ! Add a field to the master field list. Put input arguments of
+ ! Add a field to the list of all history fields. Put input arguments of
! field name, units, number of levels, averaging flag, and long name
- ! into a type entry in the global master field list (masterlist).
+ ! into a type entry in the global list of all history fields (allhistfldlist).
!
! The optional argument no_snow_behavior should be given when this is a multi-layer
! snow field, and should be absent otherwise. It should take on one of the no_snow_*
@@ -535,14 +536,14 @@ subroutine masterlist_addfld (fname, numdims, type1d, type1d_out, &
!
! !LOCAL VARIABLES:
integer :: n ! loop index
- integer :: f ! masterlist index
+ integer :: f ! allhistfldlist index
integer :: numa ! total number of atm cells across all processors
integer :: numg ! total number of gridcells across all processors
integer :: numl ! total number of landunits across all processors
integer :: numc ! total number of columns across all processors
integer :: nump ! total number of pfts across all processors
type(bounds_type) :: bounds
- character(len=*),parameter :: subname = 'masterlist_addfld'
+ character(len=*),parameter :: subname = 'allhistfldlist_addfld'
!------------------------------------------------------------------------
if (.not. avgflag_valid(avgflag, blank_valid=.true.)) then
@@ -570,82 +571,82 @@ subroutine masterlist_addfld (fname, numdims, type1d, type1d_out, &
end if
! Ensure that new field doesn't already exist
- do n = 1,nfmaster
- if (masterlist(n)%field%name == fname) then
+ do n = 1,nallhistflds
+ if (allhistfldlist(n)%field%name == fname) then
write(iulog,*) trim(subname),' ERROR:', fname, ' already on list'
call endrun(msg=errMsg(sourcefile, __LINE__))
end if
end do
- ! Increase number of fields on master field list
+ ! Increase number of fields on list of all history fields
- nfmaster = nfmaster + 1
- f = nfmaster
+ nallhistflds = nallhistflds + 1
+ f = nallhistflds
- ! Check number of fields in master list against maximum number for master list
+ ! Check number of fields in list against maximum number
- if (nfmaster > max_flds) then
+ if (nallhistflds > max_flds) then
write(iulog,*) trim(subname),' ERROR: too many fields for primary history file ', &
- '-- max_flds,nfmaster=', max_flds, nfmaster
+ '-- max_flds,nallhistflds=', max_flds, nallhistflds
call endrun(msg=errMsg(sourcefile, __LINE__))
end if
- ! Add field to master list
-
- masterlist(f)%field%name = fname
- masterlist(f)%field%long_name = long_name
- masterlist(f)%field%units = units
- masterlist(f)%field%type1d = type1d
- masterlist(f)%field%type1d_out = type1d_out
- masterlist(f)%field%type2d = type2d
- masterlist(f)%field%numdims = numdims
- masterlist(f)%field%num2d = num2d
- masterlist(f)%field%hpindex = hpindex
- masterlist(f)%field%p2c_scale_type = p2c_scale_type
- masterlist(f)%field%c2l_scale_type = c2l_scale_type
- masterlist(f)%field%l2g_scale_type = l2g_scale_type
+ ! Add field to list of all history fields
+
+ allhistfldlist(f)%field%name = fname
+ allhistfldlist(f)%field%long_name = long_name
+ allhistfldlist(f)%field%units = units
+ allhistfldlist(f)%field%type1d = type1d
+ allhistfldlist(f)%field%type1d_out = type1d_out
+ allhistfldlist(f)%field%type2d = type2d
+ allhistfldlist(f)%field%numdims = numdims
+ allhistfldlist(f)%field%num2d = num2d
+ allhistfldlist(f)%field%hpindex = hpindex
+ allhistfldlist(f)%field%p2c_scale_type = p2c_scale_type
+ allhistfldlist(f)%field%c2l_scale_type = c2l_scale_type
+ allhistfldlist(f)%field%l2g_scale_type = l2g_scale_type
select case (type1d)
case (grlnd)
- masterlist(f)%field%beg1d = bounds%begg
- masterlist(f)%field%end1d = bounds%endg
- masterlist(f)%field%num1d = numg
+ allhistfldlist(f)%field%beg1d = bounds%begg
+ allhistfldlist(f)%field%end1d = bounds%endg
+ allhistfldlist(f)%field%num1d = numg
case (nameg)
- masterlist(f)%field%beg1d = bounds%begg
- masterlist(f)%field%end1d = bounds%endg
- masterlist(f)%field%num1d = numg
+ allhistfldlist(f)%field%beg1d = bounds%begg
+ allhistfldlist(f)%field%end1d = bounds%endg
+ allhistfldlist(f)%field%num1d = numg
case (namel)
- masterlist(f)%field%beg1d = bounds%begl
- masterlist(f)%field%end1d = bounds%endl
- masterlist(f)%field%num1d = numl
+ allhistfldlist(f)%field%beg1d = bounds%begl
+ allhistfldlist(f)%field%end1d = bounds%endl
+ allhistfldlist(f)%field%num1d = numl
case (namec)
- masterlist(f)%field%beg1d = bounds%begc
- masterlist(f)%field%end1d = bounds%endc
- masterlist(f)%field%num1d = numc
+ allhistfldlist(f)%field%beg1d = bounds%begc
+ allhistfldlist(f)%field%end1d = bounds%endc
+ allhistfldlist(f)%field%num1d = numc
case (namep)
- masterlist(f)%field%beg1d = bounds%begp
- masterlist(f)%field%end1d = bounds%endp
- masterlist(f)%field%num1d = nump
+ allhistfldlist(f)%field%beg1d = bounds%begp
+ allhistfldlist(f)%field%end1d = bounds%endp
+ allhistfldlist(f)%field%num1d = nump
case default
write(iulog,*) trim(subname),' ERROR: unknown 1d output type= ',type1d
call endrun(msg=errMsg(sourcefile, __LINE__))
end select
if (present(no_snow_behavior)) then
- masterlist(f)%field%no_snow_behavior = no_snow_behavior
+ allhistfldlist(f)%field%no_snow_behavior = no_snow_behavior
else
- masterlist(f)%field%no_snow_behavior = no_snow_unset
+ allhistfldlist(f)%field%no_snow_behavior = no_snow_unset
end if
- ! The following two fields are used only in master field list,
+ ! The following two fields are used only in list of all history fields,
! NOT in the runtime active field list
- ! ALL FIELDS IN THE MASTER LIST ARE INITIALIZED WITH THE ACTIVE
+ ! ALL FIELDS IN THE FORMER ARE INITIALIZED WITH THE ACTIVE
! FLAG SET TO FALSE
- masterlist(f)%avgflag(:) = avgflag
- masterlist(f)%actflag(:) = .false.
+ allhistfldlist(f)%avgflag(:) = avgflag
+ allhistfldlist(f)%actflag(:) = .false.
- end subroutine masterlist_addfld
+ end subroutine allhistfldlist_addfld
!-----------------------------------------------------------------------
subroutine hist_htapes_build ()
@@ -729,7 +730,7 @@ subroutine hist_htapes_build ()
end subroutine hist_htapes_build
!-----------------------------------------------------------------------
- subroutine masterlist_make_active (name, tape_index, avgflag)
+ subroutine allhistfldlist_make_active (name, tape_index, avgflag)
!
! !DESCRIPTION:
! Add a field to the default ``on'' list for a given history file.
@@ -742,8 +743,8 @@ subroutine masterlist_make_active (name, tape_index, avgflag)
!
! !LOCAL VARIABLES:
integer :: f ! field index
- logical :: found ! flag indicates field found in masterlist
- character(len=*),parameter :: subname = 'masterlist_make_active'
+ logical :: found ! flag indicates field found in allhistfldlist
+ character(len=*),parameter :: subname = 'allhistfldlist_make_active'
!-----------------------------------------------------------------------
! Check validity of input arguments
@@ -760,16 +761,16 @@ subroutine masterlist_make_active (name, tape_index, avgflag)
endif
end if
- ! Look through master list for input field name.
+ ! Look through list of all history fields for input field name.
! When found, set active flag for that tape to true.
! Also reset averaging flag if told to use other than default.
found = .false.
- do f = 1,nfmaster
- if (trim(name) == trim(masterlist(f)%field%name)) then
- masterlist(f)%actflag(tape_index) = .true.
+ do f = 1,nallhistflds
+ if (trim(name) == trim(allhistfldlist(f)%field%name)) then
+ allhistfldlist(f)%actflag(tape_index) = .true.
if (present(avgflag)) then
- if (avgflag/= ' ') masterlist(f)%avgflag(tape_index) = avgflag
+ if (avgflag/= ' ') allhistfldlist(f)%avgflag(tape_index) = avgflag
end if
found = .true.
exit
@@ -780,14 +781,14 @@ subroutine masterlist_make_active (name, tape_index, avgflag)
call endrun(msg=errMsg(sourcefile, __LINE__))
end if
- end subroutine masterlist_make_active
+ end subroutine allhistfldlist_make_active
!-----------------------------------------------------------------------
- subroutine masterlist_change_timeavg (t)
+ subroutine allhistfldlist_change_timeavg (t)
!
! !DESCRIPTION:
! Override default history tape contents for a specific tape.
- ! Copy the flag into the master field list.
+ ! Copy the flag into the list of all history fields.
!
! !ARGUMENTS:
integer, intent(in) :: t ! history tape index
@@ -795,7 +796,7 @@ subroutine masterlist_change_timeavg (t)
! !LOCAL VARIABLES:
integer :: f ! field index
character(len=avgflag_strlen) :: avgflag ! local equiv of hist_avgflag_pertape(t)
- character(len=*),parameter :: subname = 'masterlist_change_timeavg'
+ character(len=*),parameter :: subname = 'allhistfldlist_change_timeavg'
!-----------------------------------------------------------------------
avgflag = hist_avgflag_pertape(t)
@@ -804,11 +805,11 @@ subroutine masterlist_change_timeavg (t)
call endrun(msg=errMsg(sourcefile, __LINE__))
end if
- do f = 1,nfmaster
- masterlist(f)%avgflag(t) = avgflag
+ do f = 1,nallhistflds
+ allhistfldlist(f)%avgflag(t) = avgflag
end do
- end subroutine masterlist_change_timeavg
+ end subroutine allhistfldlist_change_timeavg
!-----------------------------------------------------------------------
subroutine htapes_fieldlist()
@@ -820,7 +821,7 @@ subroutine htapes_fieldlist()
! Then sort the result alphanumerically.
!
! Sets history_tape_in_use and htapes_defined. Fills fields in 'tape' array.
- ! Optionally updates masterlist avgflag.
+ ! Optionally updates allhistfldlist avgflag.
!
! !ARGUMENTS:
!
@@ -828,7 +829,7 @@ subroutine htapes_fieldlist()
integer :: t, f ! tape, field indices
integer :: ff ! index into include, exclude and fprec list
character(len=max_namlen) :: name ! field name portion of fincl (i.e. no avgflag separator)
- character(len=max_namlen) :: mastername ! name from masterlist field
+ character(len=max_namlen) :: allhistfldname ! name from allhistfldlist field
character(len=avgflag_strlen) :: avgflag ! averaging flag
character(len=1) :: prec_acc ! history buffer precision flag
character(len=1) :: prec_wrt ! history buffer write precision flag
@@ -840,7 +841,7 @@ subroutine htapes_fieldlist()
do t=1,max_tapes
if (hist_avgflag_pertape(t) /= ' ') then
- call masterlist_change_timeavg (t)
+ call allhistfldlist_change_timeavg (t)
end if
end do
@@ -873,11 +874,11 @@ subroutine htapes_fieldlist()
f = 1
do while (f < max_flds .and. fincl(f,t) /= ' ')
name = getname (fincl(f,t))
- do ff = 1,nfmaster
- mastername = masterlist(ff)%field%name
- if (name == mastername) exit
+ do ff = 1,nallhistflds
+ allhistfldname = allhistfldlist(ff)%field%name
+ if (name == allhistfldname) exit
end do
- if (name /= mastername) then
+ if (name /= allhistfldname) then
write(iulog,*) trim(subname),' ERROR: ', trim(name), ' in fincl(', f, ') ',&
'for history tape ',t,' not found'
call endrun(msg=errMsg(sourcefile, __LINE__))
@@ -887,11 +888,11 @@ subroutine htapes_fieldlist()
f = 1
do while (f < max_flds .and. fexcl(f,t) /= ' ')
- do ff = 1,nfmaster
- mastername = masterlist(ff)%field%name
- if (fexcl(f,t) == mastername) exit
+ do ff = 1,nallhistflds
+ allhistfldname = allhistfldlist(ff)%field%name
+ if (fexcl(f,t) == allhistfldname) exit
end do
- if (fexcl(f,t) /= mastername) then
+ if (fexcl(f,t) /= allhistfldname) then
write(iulog,*) trim(subname),' ERROR: ', fexcl(f,t), ' in fexcl(', f, ') ', &
'for history tape ',t,' not found'
call endrun(msg=errMsg(sourcefile, __LINE__))
@@ -904,16 +905,16 @@ subroutine htapes_fieldlist()
tape(:)%nflds = 0
do t = 1,max_tapes
- ! Loop through the masterlist set of field names and determine if any of those
+ ! Loop through the allhistfldlist set of field names and determine if any of those
! are in the FINCL or FEXCL arrays
! The call to list_index determines the index in the FINCL or FEXCL arrays
- ! that the masterlist field corresponds to
+ ! that the allhistfldlist field corresponds to
! Add the field to the tape if specified via namelist (FINCL[1-max_tapes]),
! or if it is on by default and was not excluded via namelist (FEXCL[1-max_tapes]).
- do f = 1,nfmaster
- mastername = masterlist(f)%field%name
- call list_index (fincl(1,t), mastername, ff)
+ do f = 1,nallhistflds
+ allhistfldname = allhistfldlist(f)%field%name
+ call list_index (fincl(1,t), allhistfldname, ff)
if (ff > 0) then
@@ -927,7 +928,7 @@ subroutine htapes_fieldlist()
! find index of field in exclude list
- call list_index (fexcl(1,t), mastername, ff)
+ call list_index (fexcl(1,t), allhistfldname, ff)
! if field is in exclude list, ff > 0 and htape_addfld
! will not be called for field
@@ -936,7 +937,7 @@ subroutine htapes_fieldlist()
! called below only if field is not in exclude list OR in
! include list
- if (ff == 0 .and. masterlist(f)%actflag(t)) then
+ if (ff == 0 .and. allhistfldlist(f)%actflag(t)) then
call htape_addfld (t, f, ' ')
end if
@@ -1016,7 +1017,7 @@ subroutine htapes_fieldlist()
call shr_sys_flush(iulog)
end if
- ! Set flag indicating h-tape contents are now defined (needed by masterlist_addfld)
+ ! Set flag indicating h-tape contents are now defined (needed by allhistfldlist_addfld)
htapes_defined = .true.
@@ -1024,23 +1025,23 @@ subroutine htapes_fieldlist()
end subroutine htapes_fieldlist
!-----------------------------------------------------------------------
- subroutine copy_master_entry(this, other)
+ subroutine copy_allhistfldlist_entry(this, other)
! set this = other
- class(master_entry), intent(out) :: this
+ class(allhistfldlist_entry), intent(out) :: this
class(entry_base), intent(in) :: other
select type(this)
- type is (master_entry)
+ type is (allhistfldlist_entry)
select type(other)
- type is (master_entry)
+ type is (allhistfldlist_entry)
this = other
class default
- call endrun('Unexpected type of "other" in copy_master_entry')
+ call endrun('Unexpected type of "other" in copy_allhistfldlist_entry')
end select
class default
- call endrun('Unexpected type of "this" in copy_master_entry')
+ call endrun('Unexpected type of "this" in copy_allhistfldlist_entry')
end select
- end subroutine copy_master_entry
+ end subroutine copy_allhistfldlist_entry
!-----------------------------------------------------------------------
subroutine copy_history_entry(this, other)
@@ -1147,11 +1148,11 @@ end function is_mapping_upto_subgrid
subroutine htape_addfld (t, f, avgflag)
!
! !DESCRIPTION:
- ! Add a field to a history tape, copying metadata from the master field list
+ ! Add a field to a history tape, copying metadata from the list of all history fields
!
! !ARGUMENTS:
integer, intent(in) :: t ! history tape index
- integer, intent(in) :: f ! field index from master field list
+ integer, intent(in) :: f ! field index from list of all history fields
character(len=*), intent(in) :: avgflag ! time averaging flag
!
! !LOCAL VARIABLES:
@@ -1175,7 +1176,7 @@ subroutine htape_addfld (t, f, avgflag)
if (htapes_defined) then
write(iulog,*) trim(subname),' ERROR: attempt to add field ', &
- masterlist(f)%field%name, ' after history files are set'
+ allhistfldlist(f)%field%name, ' after history files are set'
call endrun(msg=errMsg(sourcefile, __LINE__))
end if
@@ -1184,7 +1185,7 @@ subroutine htape_addfld (t, f, avgflag)
! Copy field information
- tape(t)%hlist(n)%field = masterlist(f)%field
+ tape(t)%hlist(n)%field = allhistfldlist(f)%field
! Determine bounds
@@ -1268,8 +1269,8 @@ subroutine htape_addfld (t, f, avgflag)
tape(t)%hlist(n)%field%num1d_out = num1d_out
! Fields native bounds
- beg1d = masterlist(f)%field%beg1d
- end1d = masterlist(f)%field%end1d
+ beg1d = allhistfldlist(f)%field%beg1d
+ end1d = allhistfldlist(f)%field%end1d
! Alloccate and initialize history buffer and related info
@@ -1284,7 +1285,7 @@ subroutine htape_addfld (t, f, avgflag)
tape(t)%hlist(n)%hbuf(:,:) = 0._r8
tape(t)%hlist(n)%nacs(:,:) = 0
- ! Set time averaging flag based on masterlist setting or
+ ! Set time averaging flag based on allhistfldlist setting or
! override the default averaging flag with namelist setting
if (.not. avgflag_valid(avgflag, blank_valid=.true.)) then
@@ -1293,7 +1294,7 @@ subroutine htape_addfld (t, f, avgflag)
end if
if (avgflag == ' ') then
- tape(t)%hlist(n)%avgflag = masterlist(f)%avgflag(t)
+ tape(t)%hlist(n)%avgflag = allhistfldlist(f)%avgflag(t)
else
tape(t)%hlist(n)%avgflag = avgflag
end if
@@ -5193,7 +5194,7 @@ subroutine hist_addfld1d (fname, units, avgflag, long_name, type1d_out, &
! !DESCRIPTION:
! Initialize a single level history field. The pointer inputs, ptr\_*,
! point to the appropriate-type array storing the raw history data points.
- ! The value of type1d passed to masterlist\_add\_fld determines which of the
+ ! The value of type1d passed to allhistfldlist\_add\_fld determines which of the
! 1d type of the output and the beginning and ending indices the history
! buffer field). All fields default to being written to the first history tape
! unless 'default' is set to 'inactive'.
@@ -5381,9 +5382,9 @@ subroutine hist_addfld1d (fname, units, avgflag, long_name, type1d_out, &
if (present(l2g_scale_type)) scale_type_l2g = l2g_scale_type
if (present(type1d_out)) l_type1d_out = type1d_out
- ! Add field to masterlist
+ ! Add field to allhistfldlist
- call masterlist_addfld (fname=trim(fname), numdims=1, type1d=l_type1d, &
+ call allhistfldlist_addfld (fname=trim(fname), numdims=1, type1d=l_type1d, &
type1d_out=l_type1d_out, type2d=type2d_unset, num2d=1, &
units=units, avgflag=avgflag, long_name=long_name, hpindex=hpindex, &
p2c_scale_type=scale_type_p2c, c2l_scale_type=scale_type_c2l, &
@@ -5396,7 +5397,7 @@ subroutine hist_addfld1d (fname, units, avgflag, long_name, type1d_out, &
if (trim(l_default) == 'inactive') then
return
else
- call masterlist_make_active (name=trim(fname), tape_index=1)
+ call allhistfldlist_make_active (name=trim(fname), tape_index=1)
end if
end subroutine hist_addfld1d
@@ -5411,7 +5412,7 @@ subroutine hist_addfld2d (fname, type2d, units, avgflag, long_name, type1d_out,
! !DESCRIPTION:
! Initialize a single level history field. The pointer inputs, ptr\_*,
! point to the appropriate-type array storing the raw history data points.
- ! The value of type1d passed to masterlist\_add\_fld determines which of the
+ ! The value of type1d passed to allhistfldlist\_add\_fld determines which of the
! 1d type of the output and the beginning and ending indices the history
! buffer field). All fields default to being written to the first history tape
! unless 'default' is set to 'inactive'.
@@ -5717,9 +5718,9 @@ subroutine hist_addfld2d (fname, type2d, units, avgflag, long_name, type1d_out,
if (present(l2g_scale_type)) scale_type_l2g = l2g_scale_type
if (present(type1d_out)) l_type1d_out = type1d_out
- ! Add field to masterlist
+ ! Add field to allhistfldlist
- call masterlist_addfld (fname=trim(fname), numdims=2, type1d=l_type1d, &
+ call allhistfldlist_addfld (fname=trim(fname), numdims=2, type1d=l_type1d, &
type1d_out=l_type1d_out, type2d=type2d, num2d=num2d, &
units=units, avgflag=avgflag, long_name=long_name, hpindex=hpindex, &
p2c_scale_type=scale_type_p2c, c2l_scale_type=scale_type_c2l, &
@@ -5732,7 +5733,7 @@ subroutine hist_addfld2d (fname, type2d, units, avgflag, long_name, type1d_out,
if (trim(l_default) == 'inactive') then
return
else
- call masterlist_make_active (name=trim(fname), tape_index=1)
+ call allhistfldlist_make_active (name=trim(fname), tape_index=1)
end if
end subroutine hist_addfld2d
diff --git a/src/utils/clm_time_manager.F90 b/src/utils/clm_time_manager.F90
index b8d9930b24..5c65f5decd 100644
--- a/src/utils/clm_time_manager.F90
+++ b/src/utils/clm_time_manager.F90
@@ -59,6 +59,8 @@ module clm_time_manager
is_beg_curr_year, &! return true on first timestep in current year
is_end_curr_year, &! return true on last timestep in current year
is_perpetual, &! return true if perpetual calendar is in use
+ is_doy_in_interval, &! return true if day of year is in the provided interval
+ is_today_in_doy_interval, &! return true if today's day of year is in the provided interval
is_near_local_noon, &! return true if near local noon
is_restart, &! return true if this is a restart run
update_rad_dtime, &! track radiation interval via nstep
@@ -1759,6 +1761,58 @@ end function is_perpetual
!=========================================================================================
+ logical function is_doy_in_interval(start, end, doy)
+
+ ! Return true if day of year is in the provided interval.
+ ! Does not treat leap years differently from normal years.
+ ! Arguments
+ integer, intent(in) :: start ! start of interval (day of year)
+ integer, intent(in) :: end ! end of interval (day of year)
+ integer, intent(in) :: doy ! day of year to query
+
+ ! Local variables
+ logical :: window_crosses_newyear
+
+ character(len=*), parameter :: sub = 'clm::is_doy_in_interval'
+
+ window_crosses_newyear = end < start
+
+ if (window_crosses_newyear .and. &
+ (doy >= start .or. doy <= end)) then
+ is_doy_in_interval = .true.
+ else if (.not. window_crosses_newyear .and. &
+ (doy >= start .and. doy <= end)) then
+ is_doy_in_interval = .true.
+ else
+ is_doy_in_interval = .false.
+ end if
+
+ end function is_doy_in_interval
+
+ !=========================================================================================
+
+ logical function is_today_in_doy_interval(start, end)
+
+ ! Return true if today's day of year is in the provided interval.
+ ! Does not treat leap years differently from normal years.
+ ! Arguments
+ integer, intent(in) :: start ! start of interval (day of year)
+ integer, intent(in) :: end ! end of interval (day of year)
+
+ ! Local variable(s)
+ integer :: doy_today
+
+ character(len=*), parameter :: sub = 'clm::is_today_in_doy_interval'
+
+ ! Get doy of beginning of current timestep
+ doy_today = get_prev_calday()
+
+ is_today_in_doy_interval = is_doy_in_interval(start, end, doy_today)
+
+ end function is_today_in_doy_interval
+
+ !=========================================================================================
+
subroutine timemgr_datediff(ymd1, tod1, ymd2, tod2, days)
! Calculate the difference (ymd2,tod2) - (ymd1,tod1) and return the result in days.
diff --git a/src/utils/test/clm_time_manager_test/test_clm_time_manager.pf b/src/utils/test/clm_time_manager_test/test_clm_time_manager.pf
index 435d795e50..78565fd54d 100644
--- a/src/utils/test/clm_time_manager_test/test_clm_time_manager.pf
+++ b/src/utils/test/clm_time_manager_test/test_clm_time_manager.pf
@@ -577,4 +577,85 @@ contains
end subroutine bad_hilontolocal_time
+ @Test
+ subroutine check_is_doy_in_interval_startend(this)
+ class(TestTimeManager), intent(inout) :: this
+
+ integer, parameter :: start = 100
+ integer, parameter :: end = 300
+
+ @assertTrue(is_doy_in_interval(start, end, start))
+ @assertTrue(is_doy_in_interval(start, end, end))
+ @assertTrue(is_doy_in_interval(start, end, 200))
+ @assertFalse(is_doy_in_interval(start, end, 35))
+ @assertFalse(is_doy_in_interval(start, end, 350))
+
+ end subroutine check_is_doy_in_interval_startend
+
+ @Test
+ subroutine check_is_doy_in_interval_endstart(this)
+ class(TestTimeManager), intent(inout) :: this
+
+ integer, parameter :: start = 300
+ integer, parameter :: end = 100
+
+ @assertTrue(is_doy_in_interval(start, end, start))
+ @assertTrue(is_doy_in_interval(start, end, end))
+ @assertFalse(is_doy_in_interval(start, end, 200))
+ @assertTrue(is_doy_in_interval(start, end, 35))
+ @assertTrue(is_doy_in_interval(start, end, 350))
+
+ end subroutine check_is_doy_in_interval_endstart
+
+ @Test
+ subroutine check_is_doy_in_interval_sameday(this)
+ class(TestTimeManager), intent(inout) :: this
+
+ integer, parameter :: start = 300
+ integer, parameter :: end = 300
+
+ @assertTrue(is_doy_in_interval(start, end, start))
+ @assertTrue(is_doy_in_interval(start, end, end))
+ @assertFalse(is_doy_in_interval(start, end, 200))
+ @assertFalse(is_doy_in_interval(start, end, 350))
+
+ end subroutine check_is_doy_in_interval_sameday
+
+ @Test
+ subroutine check_is_today_in_doy_interval(this)
+ class(TestTimeManager), intent(inout) :: this
+
+ integer :: start, end
+
+ call unittest_timemgr_setup(dtime=dtime, use_gregorian_calendar=.true.)
+
+ start = 100 ! April 10
+ end = 300 ! October 27
+
+ ! Test well before interval
+ call set_date(yr=2009, mon=3, day=25, tod=0)
+ @assertFalse(is_today_in_doy_interval(start, end))
+
+ ! Test last timestep before interval
+ call set_date(yr=2009, mon=4, day=10, tod=0)
+ @assertFalse(is_today_in_doy_interval(start, end))
+
+ ! Test first timestep of interval
+ call set_date(yr=2009, mon=4, day=10, tod=dtime)
+ @assertTrue(is_today_in_doy_interval(start, end))
+
+ ! Test well within interval
+ call set_date(yr=2009, mon=7, day=24, tod=0)
+ @assertTrue(is_today_in_doy_interval(start, end))
+
+ ! Test last timestep of interval
+ call set_date(yr=2009, mon=10, day=28, tod=0)
+ @assertTrue(is_today_in_doy_interval(start, end))
+
+ ! Test first timestep after interval
+ call set_date(yr=2009, mon=10, day=28, tod=dtime)
+ @assertFalse(is_today_in_doy_interval(start, end))
+
+ end subroutine check_is_today_in_doy_interval
+
end module test_clm_time_manager
diff --git a/tools/mksurfdata_map/modify_1x1_mexicocityMEX.cfg b/tools/mksurfdata_map/modify_1x1_mexicocityMEX.cfg
index 5e9de7968b..6eab73a159 100644
--- a/tools/mksurfdata_map/modify_1x1_mexicocityMEX.cfg
+++ b/tools/mksurfdata_map/modify_1x1_mexicocityMEX.cfg
@@ -36,15 +36,19 @@ lnd_lon_2 = 360
landmask_file = UNSET
# PFT/CFT to be set to 100% according to user-defined mask.
-# If idealized = True and dom_plant = UNSET, the latter defaults to 0
+# If idealized = True and dom_pft = UNSET, the latter defaults to 0
# (bare soil). Valid values range from 0 to a max value (int) that one can
# obtain from the fsurdat_in file using ncdump (or method preferred by user).
# The max valid value will equal (lsmpft - 1) and will also equal the last
-# value of cft(cft).
+# value of cft(cft). Cannot be set with evenly_split_cropland = True.
dom_pft = UNSET
-# LAI, SAI, HEIGHT_TOP, and HEIGHT_BOT values by month for dom_plant
-# If dom_plant = 0, the next four default to 0 (space-delimited list
+# If True, evenly split each gridcell's cropland among all crop types (CFTs).
+# Can only be True if dom_pft is UNSET.
+evenly_split_cropland = False
+
+# LAI, SAI, HEIGHT_TOP, and HEIGHT_BOT values by month for dom_pft
+# If dom_pft = 0, the next four default to 0 (space-delimited list
# of floats without brackets).
lai = UNSET
sai = UNSET
diff --git a/tools/mksurfdata_map/modify_1x1_urbanc_alpha.cfg b/tools/mksurfdata_map/modify_1x1_urbanc_alpha.cfg
index 38b8ce6372..d704b629bd 100644
--- a/tools/mksurfdata_map/modify_1x1_urbanc_alpha.cfg
+++ b/tools/mksurfdata_map/modify_1x1_urbanc_alpha.cfg
@@ -36,15 +36,19 @@ lnd_lon_2 = 360
landmask_file = UNSET
# PFT/CFT to be set to 100% according to user-defined mask.
-# If idealized = True and dom_plant = UNSET, the latter defaults to 0
+# If idealized = True and dom_pft = UNSET, the latter defaults to 0
# (bare soil). Valid values range from 0 to a max value (int) that one can
# obtain from the fsurdat_in file using ncdump (or method preferred by user).
# The max valid value will equal (lsmpft - 1) and will also equal the last
-# value of cft(cft).
+# value of cft(cft). Cannot be set with evenly_split_cropland = True.
dom_pft = UNSET
-# LAI, SAI, HEIGHT_TOP, and HEIGHT_BOT values by month for dom_plant
-# If dom_plant = 0, the next four default to 0 (space-delimited list
+# If True, evenly split each gridcell's cropland among all crop types (CFTs).
+# Can only be True if dom_pft is UNSET.
+evenly_split_cropland = False
+
+# LAI, SAI, HEIGHT_TOP, and HEIGHT_BOT values by month for dom_pft
+# If dom_pft = 0, the next four default to 0 (space-delimited list
# of floats without brackets).
lai = UNSET
sai = UNSET
diff --git a/tools/mksurfdata_map/modify_1x1_vancouverCAN.cfg b/tools/mksurfdata_map/modify_1x1_vancouverCAN.cfg
index abc5df16b1..f46593d653 100644
--- a/tools/mksurfdata_map/modify_1x1_vancouverCAN.cfg
+++ b/tools/mksurfdata_map/modify_1x1_vancouverCAN.cfg
@@ -36,15 +36,19 @@ lnd_lon_2 = 360
landmask_file = UNSET
# PFT/CFT to be set to 100% according to user-defined mask.
-# If idealized = True and dom_plant = UNSET, the latter defaults to 0
+# If idealized = True and dom_pft = UNSET, the latter defaults to 0
# (bare soil). Valid values range from 0 to a max value (int) that one can
# obtain from the fsurdat_in file using ncdump (or method preferred by user).
# The max valid value will equal (lsmpft - 1) and will also equal the last
-# value of cft(cft).
+# value of cft(cft). Cannot be set with evenly_split_cropland = True.
dom_pft = UNSET
-# LAI, SAI, HEIGHT_TOP, and HEIGHT_BOT values by month for dom_plant
-# If dom_plant = 0, the next four default to 0 (space-delimited list
+# If True, evenly split each gridcell's cropland among all crop types (CFTs).
+# Can only be True if dom_pft is UNSET.
+evenly_split_cropland = False
+
+# LAI, SAI, HEIGHT_TOP, and HEIGHT_BOT values by month for dom_pft
+# If dom_pft = 0, the next four default to 0 (space-delimited list
# of floats without brackets).
lai = UNSET
sai = UNSET
diff --git a/tools/modify_input_files/modify_fsurdat_template.cfg b/tools/modify_input_files/modify_fsurdat_template.cfg
index 3661784521..1dfb33ce53 100644
--- a/tools/modify_input_files/modify_fsurdat_template.cfg
+++ b/tools/modify_input_files/modify_fsurdat_template.cfg
@@ -72,9 +72,13 @@ lon_dimname = UNSET
# (bare soil). Valid values range from 0 to a max value (int) that one can
# obtain from the fsurdat_in file using ncdump (or method preferred by user).
# The max valid value will equal (lsmpft - 1) and will also equal the last
-# value of cft(cft).
+# value of cft(cft). Cannot be set with evenly_split_cropland = True.
dom_pft = UNSET
+# If True, evenly split each gridcell's cropland among all crop types (CFTs).
+# Can only be True if dom_pft is UNSET.
+evenly_split_cropland = False
+
# LAI, SAI, HEIGHT_TOP, and HEIGHT_BOT values by month for dom_pft
# If dom_pft = 0, the next four default to 0 (space-delimited list
# of floats without brackets).