MONDO download files no longer working

[plweller3]

There appears to be a problem with the generated MONDO download files for the past few days. The path:

http://purl.obolibrary.org/obo/mondo/mondo-with-equivalents.json

No longer resolves. Nor does the link on the ontology page. https://obofoundry.org/ontology/mondo.html

I’m contacting you since you are listed as the contact on the page. If there is a different contact, please let me know.

Thanks!

Regards,

Phil Weller

[nicolevasilevsky]

cc @twhetzel @sabrinatoro

[matentzn]

@plweller3 Thank you for the report! The mondo-with-equivalents release was recently discontinued, see monarch-initiative/mondo#7912.

I have opened #2630 to remove the erroneous link! Thanks a ton.

[plweller3]

Really, the only notice of this was a post in the Issues section? Removing this file breaks a lot of ClinGen apps. What are we supposed to use as a replacement?

…

On Aug 9, 2024, at 8:30 AM, Nico Matentzoglu ***@***.***> wrote: @plweller3 <https://github.com/plweller3> Thank you for the report! The mondo-with-equivalents release was recently discontinued, see monarch-initiative/mondo#7912 <monarch-initiative/mondo#7912>. I have opened #2630 <#2630> to remove the erroneous link! Thanks a ton. — Reply to this email directly, view it on GitHub <#2629 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AD6XQSN2T5XRTW2S6BT6VE3ZQSY7RAVCNFSM6AAAAABMG7AHI2VHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDENZXHAZTSMBTGQ>. You are receiving this because you were mentioned.

[matentzn]

@plweller3

Ahhhhh, that is very different situation - sorry about that! I didn't understand that you were a user of this file - I thought you mere stumbled across the documentation! In this case, we need to move this to the Mondo issue tracker!

We will sort it out, dont worry - its not difficult to add this release back - we had asked on the Mondo users list who needs this file, and didnt get a response..

In any case, will open a new issue in Mondo.

[matentzn]

Closing in favour of monarch-initiative/mondo#8050, see you there @plweller3